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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr6 | genome | chr6:1096271..1097985 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G03920.1 ID=NO06G03920.1|Name=NO06G03920.1|organism=Nannochloropsis oceanica|type=mRNA|length=1341bp ATGGCGACAGCTACAGGGGCTATCCTGCATGTCCAGGCCAGAGCCGCGCG CGGCTTGCGGAATGTCGAGATTCTGGGCTTGAAGCAAGACCCTTACTTGA GGCTGCGAGCGGGGAACCAGGTGTTTCAGACGTGTGTTGTCAAAGATGGA GGTGGTATGGCCAGCTGGAATGAGAGTTTTCAGATTCCGATCCCAAATGT GACGGAAAGAGAATTTCTCTTCCTGACTGTTTTGGACCACAACACCCTCA CCGACGACACAGAGATTGGCAGCGCAAAACTTTCCCTGATCGACGTTTCC TCCCAATTTCAAGTGGGTTGCTTTGATATCTTTGACAAGCACGCAAATAA AGTTGGTGTGGTGGACCTAGCCCTGCGTCTAGAACGCGTTTGCTTACCCT TTGGTGCTTCAATCCCTACACCTGCGGCACCTCCAGTAAAGCCTACGCCT TTGGCCAAACCGGTGCCTATAGCCAATGGCAGTGACTCGCTTTACCCGCA CCAGCAGTATAAGCAGCAGCAGCAGCAGTTGCAGCAGCAACTGCAGGAGC ACAGGCACCAAAGGACAGGCTTTTCCTCCATTGCGGCTTTCCCTTCGTCC AACATGCCCCCGCAAGCCTTTTACGTGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGTCGCACGAGCAGGAACAGCAGCAGCATGGAACCTCCCCTATC ATTTACGCCCCTCGACCTGTCGTGGCGGCCTCACCCGTGCGAGTCCTTAA TTACCCTTACAACCCTGCTCCTTCCTTGTTCGCCACTGGCGTCGCGCCAT ATTCATCGCCTTCCATGACGCCACAGGAGCATCAGCAGCAGCTACAGTAC GAAAATGAGGTGCCCGAGCGCTTATATTATGCAAGCACGCCCGGCCGGCC TTTCACCCCCGTGCCGTCCGCGTACCTGCTCTGTGCTTCTCCCTATGGCA ACATAGGAGGCACTAGTACTCCTACCAGTACTGGGCATTTCTCTCCCTTC CGACACGAGCAGCAGCAGCAGCAGCTTCAACAGCAACAAGAGAAACAACA GTATACCTCCCCTTCTATGCCAAAGCCGCTGTGTGTGGAGGGGAGCAGCA GCTACAACAGAGACGGGAAGAGGCAGATTGGAATGGAGGAGGAAGAGAAC AACACCGAGAACGCCCTGCCGCCTTATTGGGAGGAGAGAAGGATGCATGA CGGTCGTACCTTTTACTTAGATCATATCCGTAAGGTCACGACTTGGACAC GGCCATTGGCACTGGGGGATGAACCCGAGTATACCGCTTGA back to topprotein sequence of NO06G03920.1 >NO06G03920.1-protein ID=NO06G03920.1-protein|Name=NO06G03920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp MATATGAILHVQARAARGLRNVEILGLKQDPYLRLRAGNQVFQTCVVKDG GGMASWNESFQIPIPNVTEREFLFLTVLDHNTLTDDTEIGSAKLSLIDVS SQFQVGCFDIFDKHANKVGVVDLALRLERVCLPFGASIPTPAAPPVKPTP LAKPVPIANGSDSLYPHQQYKQQQQQLQQQLQEHRHQRTGFSSIAAFPSS NMPPQAFYVQQQQQQQQQQQQQQQQQQQQQQQQQQQSHEQEQQQHGTSPI IYAPRPVVAASPVRVLNYPYNPAPSLFATGVAPYSSPSMTPQEHQQQLQY ENEVPERLYYASTPGRPFTPVPSAYLLCASPYGNIGGTSTPTSTGHFSPF RHEQQQQQLQQQQEKQQYTSPSMPKPLCVEGSSSYNRDGKRQIGMEEEEN NTENALPPYWEERRMHDGRTFYLDHIRKVTTWTRPLALGDEPEYTA* back to topmRNA from alignment at chr6:1096271..1097985+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G03920.1 ID=NO06G03920.1|Name=NO06G03920.1|organism=Nannochloropsis oceanica|type=mRNA|length=1715bp|location=Sequence derived from alignment at chr6:1096271..1097985+ (Nannochloropsis oceanica) ATGGCGACAGCTACAGGGGCTATCCTGCATGTCCAGGGTACGCCCAAAGT
GTTTTCTCTCTCTAGCCTACCGCGGCGCTGCTACATTCCTCTCCCTTGCA
ATCCATTTCCCTACCCATGTCATTGGTGTGTTAACATACCTTTCCTACAC
AAATTTGGACATACTTCTACCCTATGACAGCCAGAGCCGCGCGCGGCTTG
CGGAATGTCGAGATTCTGGGCTTGAAGCAAGACCCTTACTTGAGGCTGCG
AGCGGGGAACCAGGTGTTTCAGACGTGTGTTGTCAAAGATGGAGGTGGTA
TGGCCAGCTGGAATGAGAGTTTTCAGATTCCGATCCCAAATGTGACGGAA
AGGTACGTGTCTGTATTCTTTTGTCGAGGAACGAGGCGATGAAGTCCGAC
TGTGTGTAGAAAGAAAGCCCTACAGTAGGTATGACTTGTACGATGCGGTA
ACTTTGATCCTGTACCATTCCCCCCATTGAGTGATTCAAGCTTGACTGGT
TTTGTGCCCTGATTTCTCAATTGTGACATCGTGACATATTATATTTCACG
TAATCTCTACGCCTTCCCCACCCTTCTCTACAGAGAATTTCTCTTCCTGA
CTGTTTTGGACCACAACACCCTCACCGACGACACAGAGATTGGCAGCGCA
AAACTTTCCCTGATCGACGTTTCCTCCCAATTTCAAGTGGGTTGCTTTGA
TATCTTTGACAAGCACGCAAATAAAGTTGGTGTGGTGGACCTAGCCCTGC
GTCTAGAACGCGTTTGCTTACCCTTTGGTGCTTCAATCCCTACACCTGCG
GCACCTCCAGTAAAGCCTACGCCTTTGGCCAAACCGGTGCCTATAGCCAA
TGGCAGTGACTCGCTTTACCCGCACCAGCAGTATAAGCAGCAGCAGCAGC
AGTTGCAGCAGCAACTGCAGGAGCACAGGCACCAAAGGACAGGCTTTTCC
TCCATTGCGGCTTTCCCTTCGTCCAACATGCCCCCGCAAGCCTTTTACGT
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCGCACGAGCAGGAACAG
CAGCAGCATGGAACCTCCCCTATCATTTACGCCCCTCGACCTGTCGTGGC
GGCCTCACCCGTGCGAGTCCTTAATTACCCTTACAACCCTGCTCCTTCCT
TGTTCGCCACTGGCGTCGCGCCATATTCATCGCCTTCCATGACGCCACAG
GAGCATCAGCAGCAGCTACAGTACGAAAATGAGGTGCCCGAGCGCTTATA
TTATGCAAGCACGCCCGGCCGGCCTTTCACCCCCGTGCCGTCCGCGTACC
TGCTCTGTGCTTCTCCCTATGGCAACATAGGAGGCACTAGTACTCCTACC
AGTACTGGGCATTTCTCTCCCTTCCGACACGAGCAGCAGCAGCAGCAGCT
TCAACAGCAACAAGAGAAACAACAGTATACCTCCCCTTCTATGCCAAAGC
CGCTGTGTGTGGAGGGGAGCAGCAGCTACAACAGAGACGGGAAGAGGCAG
ATTGGAATGGAGGAGGAAGAGAACAACACCGAGAACGCCCTGCCGCCTTA
TTGGGAGGAGAGAAGGATGCATGACGGTCGTACCTTTTACTTAGATCATA
TCCGTAAGGTCACGACTTGGACACGGCCATTGGCACTGGGGGATGAACCC
GAGTATACCGCTTGA back to topCoding sequence (CDS) from alignment at chr6:1096271..1097985+ >NO06G03920.1 ID=NO06G03920.1|Name=NO06G03920.1|organism=Nannochloropsis oceanica|type=CDS|length=1341bp|location=Sequence derived from alignment at chr6:1096271..1097985+ (Nannochloropsis oceanica) ATGGCGACAGCTACAGGGGCTATCCTGCATGTCCAGGCCAGAGCCGCGCG CGGCTTGCGGAATGTCGAGATTCTGGGCTTGAAGCAAGACCCTTACTTGA GGCTGCGAGCGGGGAACCAGGTGTTTCAGACGTGTGTTGTCAAAGATGGA GGTGGTATGGCCAGCTGGAATGAGAGTTTTCAGATTCCGATCCCAAATGT GACGGAAAGAGAATTTCTCTTCCTGACTGTTTTGGACCACAACACCCTCA CCGACGACACAGAGATTGGCAGCGCAAAACTTTCCCTGATCGACGTTTCC TCCCAATTTCAAGTGGGTTGCTTTGATATCTTTGACAAGCACGCAAATAA AGTTGGTGTGGTGGACCTAGCCCTGCGTCTAGAACGCGTTTGCTTACCCT TTGGTGCTTCAATCCCTACACCTGCGGCACCTCCAGTAAAGCCTACGCCT TTGGCCAAACCGGTGCCTATAGCCAATGGCAGTGACTCGCTTTACCCGCA CCAGCAGTATAAGCAGCAGCAGCAGCAGTTGCAGCAGCAACTGCAGGAGC ACAGGCACCAAAGGACAGGCTTTTCCTCCATTGCGGCTTTCCCTTCGTCC AACATGCCCCCGCAAGCCTTTTACGTGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGTCGCACGAGCAGGAACAGCAGCAGCATGGAACCTCCCCTATC ATTTACGCCCCTCGACCTGTCGTGGCGGCCTCACCCGTGCGAGTCCTTAA TTACCCTTACAACCCTGCTCCTTCCTTGTTCGCCACTGGCGTCGCGCCAT ATTCATCGCCTTCCATGACGCCACAGGAGCATCAGCAGCAGCTACAGTAC GAAAATGAGGTGCCCGAGCGCTTATATTATGCAAGCACGCCCGGCCGGCC TTTCACCCCCGTGCCGTCCGCGTACCTGCTCTGTGCTTCTCCCTATGGCA ACATAGGAGGCACTAGTACTCCTACCAGTACTGGGCATTTCTCTCCCTTC CGACACGAGCAGCAGCAGCAGCAGCTTCAACAGCAACAAGAGAAACAACA GTATACCTCCCCTTCTATGCCAAAGCCGCTGTGTGTGGAGGGGAGCAGCA GCTACAACAGAGACGGGAAGAGGCAGATTGGAATGGAGGAGGAAGAGAAC AACACCGAGAACGCCCTGCCGCCTTATTGGGAGGAGAGAAGGATGCATGA CGGTCGTACCTTTTACTTAGATCATATCCGTAAGGTCACGACTTGGACAC GGCCATTGGCACTGGGGGATGAACCCGAGTATACCGCTTGA back to top
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