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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr6 | genome | chr6:680893..682557 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO06G02380.1 vs.
Match: EWM26248.1 (peptidase d [Nannochloropsis gaditana]) HSP 1 Score: 840.5 bits (2170), Expect = 3.000e-240 Identity = 410/540 (75.93%), Postives = 468/540 (86.67%), Query Frame = 0
Query: 12 ADDAHGHVGHVALNRIPHGAPVHRRLDNPTLTATMPPMVVPMSLYAENRQKLCARLKKKLASTTFKRAIVLMEGGKEEYRYESDAEKIFRQESSFAYLFGVKEPGFYGTIDVESGKTTLYTPRLPVEYAVWMGKIQPPSHFKALYEVDEVMFVDELAKHLVGGKEGEAGDEVARPDLLLLNQGLNTDSGNMAKPAFVEGVTPSPPTAKEGGKKGGSVECDYEMLYPELVECRVFKSEAELQVMQYVNDISSDAHLAVMGQVKVGMTEYQLESLFLHHGYFFGGCRHVAYTSICGCGPNAATLHYGHAGAPNDRLIREGDMLLLDMGAEYKCYTSDITCSFPATGRFSADQRMIFECVQAMQFAVLDALKPGVAWVDMHALAYRVGLEKLVEGGLLKGGVEEMMKENLMSFFMPHGLGHFMGLDVHDVGGFPPSLGLKRDERKGFKNLRTGRRMEVGMVITVEPGVYFIDLLMDELVGDERVNKFVNVEMLESRFRGFGGVRLEDDVVIVEGGVRNMTRAPRTVEDVEAVMAGKITTKEEL 552
A A+GHVG VAL R+PHGAPVHRRLD+PTLTATMPP+ VPMS+YAENRQKLCARL +KL++ K+ +VLMEGGKEEYRY+SDAEKIFRQES FAYLFGVKEPGFYG+IDV +G TTLY PRLP EYAVWMG+IQPPSHF+A+YEVD V+FVDELA L+G + RPD LLLN+GLNTDSG+ AKPA VEGVT +P G + G + CDY+ LY ELVECRV KS AEL+V+QYVNDISSDAHLAVM QVK GMTEYQLESLFLHHGY++GGCRHVAYTSICGCGPNAATLHYGHAGAPNDRLIR+GDMLLLDMGAE++CY SDITCSFPA+G FS DQ+MIF+ VQAMQFAV+DAL+PGVAW DMH LAYRVG E L++GGLLKG VE +M+ N+M FFMPHGLGHFMGLDVHD GG+PP+LGLK+ E++G+KNLRTGR ME GMVITVEPGVYFID L+DELV D R+ + V++E+LE+RFRGFGGVRLEDDVVIVEGG+RN+TRA RTVE+VEAVMAGKI KEEL
Sbjct: 11 AQHANGHVGRVALERMPHGAPVHRRLDHPTLTATMPPIEVPMSMYAENRQKLCARLLEKLSNAREKKLLVLMEGGKEEYRYDSDAEKIFRQESWFAYLFGVKEPGFYGSIDVNTGYTTLYMPRLPAEYAVWMGRIQPPSHFQAMYEVDRVLFVDELAATLLGPE---------RPDTLLLNRGLNTDSGSTAKPASVEGVT-TPLKEGNGAQAGKPLPCDYDSLYDELVECRVHKSAAELRVLQYVNDISSDAHLAVMQQVKPGMTEYQLESLFLHHGYYYGGCRHVAYTSICGCGPNAATLHYGHAGAPNDRLIRDGDMLLLDMGAEFRCYASDITCSFPASGTFSPDQKMIFQVVQAMQFAVMDALRPGVAWPDMHDLAYRVGCEMLLKGGLLKGSVEALMEANIMPFFMPHGLGHFMGLDVHDCGGYPPALGLKKSEKRGYKNLRTGRVMEEGMVITVEPGVYFIDSLLDELVADVRLRELVDLEVLETRFRGFGGVRLEDDVVIVEGGIRNLTRAARTVEEVEAVMAGKIKCKEEL 540
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G02380.1 ID=NO06G02380.1|Name=NO06G02380.1|organism=Nannochloropsis oceanica|type=mRNA|length=1665bp
ATGGCCCCCCCTCCCCCTGCCACCGCCTCAGCCGCCGACGACGCACATGG
TCACGTGGGACACGTGGCATTGAACCGCATCCCGCATGGTGCACCCGTGC
ATCGCCGCTTGGACAACCCGACCTTGACGGCCACCATGCCTCCGATGGTA
GTGCCCATGTCATTGTACGCTGAGAACCGGCAGAAACTCTGCGCACGCCT
CAAGAAGAAGCTGGCCTCGACGACTTTCAAAAGAGCAATAGTGCTGATGG
AGGGCGGGAAAGAGGAGTATAGGTATGAATCCGACGCAGAGAAGATCTTT
CGGCAGGAGTCGTCGTTTGCGTACTTGTTTGGGGTGAAGGAGCCGGGGTT
CTATGGGACGATCGATGTGGAGAGTGGGAAGACGACGTTGTACACGCCGA
GGCTACCCGTCGAGTATGCGGTGTGGATGGGTAAGATTCAGCCACCATCT
CATTTTAAGGCTCTGTATGAAGTGGACGAGGTGATGTTTGTGGATGAATT
GGCAAAGCACCTAGTGGGAGGGAAGGAGGGAGAGGCGGGGGACGAGGTTG
CGCGCCCAGATCTTCTGCTGCTCAACCAGGGCCTGAATACCGACAGTGGG
AATATGGCAAAGCCTGCTTTTGTGGAGGGGGTGACGCCTTCGCCGCCGAC
GGCGAAAGAGGGAGGGAAGAAAGGTGGGTCGGTGGAGTGTGATTACGAGA
TGCTTTACCCTGAGTTGGTGGAATGCCGCGTGTTCAAGTCGGAGGCGGAG
TTGCAGGTGATGCAGTACGTGAACGATATAAGTAGCGATGCTCATTTGGC
GGTGATGGGACAGGTGAAAGTAGGAATGACTGAGTACCAGTTGGAGTCGC
TGTTTCTCCACCACGGCTACTTCTTTGGTGGTTGTCGGCATGTGGCCTAC
ACGTCTATATGTGGCTGTGGACCGAATGCGGCGACGCTGCATTACGGGCA
TGCGGGAGCTCCGAACGATAGGTTGATCAGGGAGGGGGATATGCTATTGT
TAGACATGGGCGCGGAATATAAGTGCTATACATCGGACATCACGTGTTCA
TTCCCGGCGACGGGGAGATTTTCTGCGGACCAAAGGATGATATTCGAGTG
CGTGCAGGCCATGCAGTTTGCGGTGCTGGATGCATTGAAGCCAGGCGTAG
CATGGGTGGATATGCATGCGCTTGCGTATCGCGTGGGGTTGGAAAAGCTA
GTGGAAGGCGGATTGCTCAAGGGGGGGGTGGAGGAGATGATGAAGGAGAA
TTTAATGAGCTTCTTCATGCCGCACGGTCTGGGTCATTTCATGGGCTTGG
ATGTGCATGATGTTGGGGGATTCCCGCCTTCGTTGGGGCTGAAGCGGGAT
GAGAGGAAAGGGTTCAAGAATCTGCGGACGGGGAGGAGGATGGAGGTGGG
GATGGTTATCACCGTGGAGCCGGGGGTGTACTTCATCGATTTGTTGATGG
ACGAGCTGGTGGGCGATGAAAGGGTCAATAAATTTGTCAATGTTGAGATG
TTGGAGAGTCGGTTTAGGGGCTTCGGTGGGGTGAGGCTGGAGGATGACGT
GGTGATTGTGGAAGGGGGGGTGAGGAATATGACGAGGGCCCCGCGAACGG
TGGAGGACGTGGAAGCCGTTATGGCGGGCAAGATTACGACAAAAGAGGAG
TTGTTCAAAAAGTGA back to topprotein sequence of NO06G02380.1 >NO06G02380.1-protein ID=NO06G02380.1-protein|Name=NO06G02380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bp
MAPPPPATASAADDAHGHVGHVALNRIPHGAPVHRRLDNPTLTATMPPMV
VPMSLYAENRQKLCARLKKKLASTTFKRAIVLMEGGKEEYRYESDAEKIF
RQESSFAYLFGVKEPGFYGTIDVESGKTTLYTPRLPVEYAVWMGKIQPPS
HFKALYEVDEVMFVDELAKHLVGGKEGEAGDEVARPDLLLLNQGLNTDSG
NMAKPAFVEGVTPSPPTAKEGGKKGGSVECDYEMLYPELVECRVFKSEAE
LQVMQYVNDISSDAHLAVMGQVKVGMTEYQLESLFLHHGYFFGGCRHVAY
TSICGCGPNAATLHYGHAGAPNDRLIREGDMLLLDMGAEYKCYTSDITCS
FPATGRFSADQRMIFECVQAMQFAVLDALKPGVAWVDMHALAYRVGLEKL
VEGGLLKGGVEEMMKENLMSFFMPHGLGHFMGLDVHDVGGFPPSLGLKRD
ERKGFKNLRTGRRMEVGMVITVEPGVYFIDLLMDELVGDERVNKFVNVEM
LESRFRGFGGVRLEDDVVIVEGGVRNMTRAPRTVEDVEAVMAGKITTKEE
LFKK* back to topmRNA from alignment at chr6:680893..682557- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G02380.1 ID=NO06G02380.1|Name=NO06G02380.1|organism=Nannochloropsis oceanica|type=mRNA|length=1665bp|location=Sequence derived from alignment at chr6:680893..682557- (Nannochloropsis oceanica)
ATGGCCCCCCCTCCCCCTGCCACCGCCTCAGCCGCCGACGACGCACATGG
TCACGTGGGACACGTGGCATTGAACCGCATCCCGCATGGTGCACCCGTGC
ATCGCCGCTTGGACAACCCGACCTTGACGGCCACCATGCCTCCGATGGTA
GTGCCCATGTCATTGTACGCTGAGAACCGGCAGAAACTCTGCGCACGCCT
CAAGAAGAAGCTGGCCTCGACGACTTTCAAAAGAGCAATAGTGCTGATGG
AGGGCGGGAAAGAGGAGTATAGGTATGAATCCGACGCAGAGAAGATCTTT
CGGCAGGAGTCGTCGTTTGCGTACTTGTTTGGGGTGAAGGAGCCGGGGTT
CTATGGGACGATCGATGTGGAGAGTGGGAAGACGACGTTGTACACGCCGA
GGCTACCCGTCGAGTATGCGGTGTGGATGGGTAAGATTCAGCCACCATCT
CATTTTAAGGCTCTGTATGAAGTGGACGAGGTGATGTTTGTGGATGAATT
GGCAAAGCACCTAGTGGGAGGGAAGGAGGGAGAGGCGGGGGACGAGGTTG
CGCGCCCAGATCTTCTGCTGCTCAACCAGGGCCTGAATACCGACAGTGGG
AATATGGCAAAGCCTGCTTTTGTGGAGGGGGTGACGCCTTCGCCGCCGAC
GGCGAAAGAGGGAGGGAAGAAAGGTGGGTCGGTGGAGTGTGATTACGAGA
TGCTTTACCCTGAGTTGGTGGAATGCCGCGTGTTCAAGTCGGAGGCGGAG
TTGCAGGTGATGCAGTACGTGAACGATATAAGTAGCGATGCTCATTTGGC
GGTGATGGGACAGGTGAAAGTAGGAATGACTGAGTACCAGTTGGAGTCGC
TGTTTCTCCACCACGGCTACTTCTTTGGTGGTTGTCGGCATGTGGCCTAC
ACGTCTATATGTGGCTGTGGACCGAATGCGGCGACGCTGCATTACGGGCA
TGCGGGAGCTCCGAACGATAGGTTGATCAGGGAGGGGGATATGCTATTGT
TAGACATGGGCGCGGAATATAAGTGCTATACATCGGACATCACGTGTTCA
TTCCCGGCGACGGGGAGATTTTCTGCGGACCAAAGGATGATATTCGAGTG
CGTGCAGGCCATGCAGTTTGCGGTGCTGGATGCATTGAAGCCAGGCGTAG
CATGGGTGGATATGCATGCGCTTGCGTATCGCGTGGGGTTGGAAAAGCTA
GTGGAAGGCGGATTGCTCAAGGGGGGGGTGGAGGAGATGATGAAGGAGAA
TTTAATGAGCTTCTTCATGCCGCACGGTCTGGGTCATTTCATGGGCTTGG
ATGTGCATGATGTTGGGGGATTCCCGCCTTCGTTGGGGCTGAAGCGGGAT
GAGAGGAAAGGGTTCAAGAATCTGCGGACGGGGAGGAGGATGGAGGTGGG
GATGGTTATCACCGTGGAGCCGGGGGTGTACTTCATCGATTTGTTGATGG
ACGAGCTGGTGGGCGATGAAAGGGTCAATAAATTTGTCAATGTTGAGATG
TTGGAGAGTCGGTTTAGGGGCTTCGGTGGGGTGAGGCTGGAGGATGACGT
GGTGATTGTGGAAGGGGGGGTGAGGAATATGACGAGGGCCCCGCGAACGG
TGGAGGACGTGGAAGCCGTTATGGCGGGCAAGATTACGACAAAAGAGGAG
TTGTTCAAAAAGTGA back to topCoding sequence (CDS) from alignment at chr6:680893..682557- >NO06G02380.1 ID=NO06G02380.1|Name=NO06G02380.1|organism=Nannochloropsis oceanica|type=CDS|length=1665bp|location=Sequence derived from alignment at chr6:680893..682557- (Nannochloropsis oceanica)
ATGGCCCCCCCTCCCCCTGCCACCGCCTCAGCCGCCGACGACGCACATGG
TCACGTGGGACACGTGGCATTGAACCGCATCCCGCATGGTGCACCCGTGC
ATCGCCGCTTGGACAACCCGACCTTGACGGCCACCATGCCTCCGATGGTA
GTGCCCATGTCATTGTACGCTGAGAACCGGCAGAAACTCTGCGCACGCCT
CAAGAAGAAGCTGGCCTCGACGACTTTCAAAAGAGCAATAGTGCTGATGG
AGGGCGGGAAAGAGGAGTATAGGTATGAATCCGACGCAGAGAAGATCTTT
CGGCAGGAGTCGTCGTTTGCGTACTTGTTTGGGGTGAAGGAGCCGGGGTT
CTATGGGACGATCGATGTGGAGAGTGGGAAGACGACGTTGTACACGCCGA
GGCTACCCGTCGAGTATGCGGTGTGGATGGGTAAGATTCAGCCACCATCT
CATTTTAAGGCTCTGTATGAAGTGGACGAGGTGATGTTTGTGGATGAATT
GGCAAAGCACCTAGTGGGAGGGAAGGAGGGAGAGGCGGGGGACGAGGTTG
CGCGCCCAGATCTTCTGCTGCTCAACCAGGGCCTGAATACCGACAGTGGG
AATATGGCAAAGCCTGCTTTTGTGGAGGGGGTGACGCCTTCGCCGCCGAC
GGCGAAAGAGGGAGGGAAGAAAGGTGGGTCGGTGGAGTGTGATTACGAGA
TGCTTTACCCTGAGTTGGTGGAATGCCGCGTGTTCAAGTCGGAGGCGGAG
TTGCAGGTGATGCAGTACGTGAACGATATAAGTAGCGATGCTCATTTGGC
GGTGATGGGACAGGTGAAAGTAGGAATGACTGAGTACCAGTTGGAGTCGC
TGTTTCTCCACCACGGCTACTTCTTTGGTGGTTGTCGGCATGTGGCCTAC
ACGTCTATATGTGGCTGTGGACCGAATGCGGCGACGCTGCATTACGGGCA
TGCGGGAGCTCCGAACGATAGGTTGATCAGGGAGGGGGATATGCTATTGT
TAGACATGGGCGCGGAATATAAGTGCTATACATCGGACATCACGTGTTCA
TTCCCGGCGACGGGGAGATTTTCTGCGGACCAAAGGATGATATTCGAGTG
CGTGCAGGCCATGCAGTTTGCGGTGCTGGATGCATTGAAGCCAGGCGTAG
CATGGGTGGATATGCATGCGCTTGCGTATCGCGTGGGGTTGGAAAAGCTA
GTGGAAGGCGGATTGCTCAAGGGGGGGGTGGAGGAGATGATGAAGGAGAA
TTTAATGAGCTTCTTCATGCCGCACGGTCTGGGTCATTTCATGGGCTTGG
ATGTGCATGATGTTGGGGGATTCCCGCCTTCGTTGGGGCTGAAGCGGGAT
GAGAGGAAAGGGTTCAAGAATCTGCGGACGGGGAGGAGGATGGAGGTGGG
GATGGTTATCACCGTGGAGCCGGGGGTGTACTTCATCGATTTGTTGATGG
ACGAGCTGGTGGGCGATGAAAGGGTCAATAAATTTGTCAATGTTGAGATG
TTGGAGAGTCGGTTTAGGGGCTTCGGTGGGGTGAGGCTGGAGGATGACGT
GGTGATTGTGGAAGGGGGGGTGAGGAATATGACGAGGGCCCCGCGAACGG
TGGAGGACGTGGAAGCCGTTATGGCGGGCAAGATTACGACAAAAGAGGAG
TTGTTCAAAAAGTGA back to top
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