NO06G01970.1, NO06G01970.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G01970.1
Unique Name	NO06G01970.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3254
Alignment location	chr6:586777..590373 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:586777..590373 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO06G01970.1 vs.
Match: EWM26224.1 (putative beta-d-xylosidase 2 [Nannochloropsis gaditana])

HSP 1 Score: 1017.7 bits (2630), Expect = 2.100e-293
Identity = 533/846 (63.00%), Postives = 632/846 (74.70%), Query Frame = 0

Query:   14 VLLLGCLLTVAAGAST-------LRKPAHATLSTRACEAATVDADDAYCDSSLPMEDRVADLLARLTVEEKIALLVNSASAVPSQSLPAYEWWSEALHGVGGSPGVTFAPPTPSATSFPQVITTSHSFNPTLMQAIGSAISTEGRVFNNVGHAGNTFWAPNINIFRDPRWGRGQETPGEDPFLSSVYATAFVRGMQEGEDGRYLKTSACCKHFAAYSVENLYNGTHRHNFDAQVTKQDMVDTYLPAFEACVVKGKASALMCSYNSINGVPACADAGLLNGMAREEWRFDGYVTSDCGAISDIWKRHNYTDSPEGACQVALQAGCDLDCSTFYAEHCPAALAQGLIQEGDLDRALGHLLRVQFRLGLFDSLEEQVYTKYGLEKVNSEEHQMLALEAARQGMVLLKNDHGVLPLSLSVEVEGEWGMEEDGMEEGAVLKTA-FLRRERERQL----RRGHREEISPPLSLAVIGPHANATEALLGNYQGVPPFIISPFEGLRKYVSDAVLVEGCGINSTLTEDQMNAADAAARAADVTILVLGLDSSIEGEGLDRTSILLPAPQVELAARVLGAAATGEKKVVVVLIAGGAVDVEFLKEDGRVAAMVFAGYPGQAGGQALAEILFGDINPSGRLTQTFYPAEFVSQAGAGDMRMRPHPTSGFPGRTYRFYEGSVVFPFGYGLSYSSFEMQEVACPAIDR-----GGDDEVGDGNSNSNRSSSDSSSSSSSSGSIVGAKKLVHLTTHSLEESEGKEVGRVCVEVINKGPRAGRIALLGFLSPPESEG--APRRSLRAFGGVDLAPQEAAVAMMTFIEADVSLADAAGVFERVPGQWVLEIEDIRVVVPVM 841
            +LL  C+L V + A         + +P ++     AC++A   AD AYC+ SL +++RV DLLARLT EEKI+LLVN+A  +P Q+LPAYEWWSEALHGVG SPGVTFAPPTP+ATSFPQV+TTS SFNP LMQAIG+AISTEGR FNNVGHAGNT+WAPNIN+FRDPRWGRGQETPGEDPFLS VYA +FVRGMQEGED RYLKTSACCKHFAAYSVENLYNGTHRHNFDA+VT QDM DTYLPAFEACV +G+ASALMCSYN+INGVPACADA LLN +AR  W FDGY+TSDCGAI+DIW RHNYT++PE ACQVAL+AGCDLDCSTFY EHCP AL+QGL+ + D+D AL HL RVQFRLG+FD+ E Q+YTKYGLE++N+ EHQ LALEAARQG+VLLKN   VLPL        + G        GA   T+ FLR  R  +         RE +S    +AV+GPHAN T+ALLGNY+G+PP+I+SP EG+R YV DA+   GCGINS+ +E     A++A  +A VT+L+LGLD SIE EG DRTS+ LPAPQVELA RVL AA    + VVVVL+ GGAVDV+FL  D RVAAM+FAGYPGQAGGQALAEILFGD+NPSGRLTQTFYPA FV+QA AGDMRMRP  + GFPGRTYRFY+G  VFPFG+GLSY+SFE++ +ACP  +R      G D VG      NR +              G +  ++LT  +    + + + R+CV V N G R GR  L+GFL PP   G  APRRSLRAFG + LA Q+ AVA++   E D+SLAD AG+F RV G+W  EIE  ++ V V+
Sbjct:   49 LLLFHCVLAVISPAKAREVTSDPMFRPFNSIDRAHACDSAGSFADAAYCNMSLSIDERVEDLLARLTQEEKISLLVNAAPGIPHQALPAYEWWSEALHGVGLSPGVTFAPPTPTATSFPQVVTTSQSFNPALMQAIGAAISTEGRAFNNVGHAGNTYWAPNINVFRDPRWGRGQETPGEDPFLSGVYAASFVRGMQEGEDPRYLKTSACCKHFAAYSVENLYNGTHRHNFDARVTPQDMADTYLPAFEACVKEGRASALMCSYNAINGVPACADAELLNALARGSWGFDGYITSDCGAIADIWTRHNYTNTPEEACQVALEAGCDLDCSTFYQEHCPHALSQGLVTDADVDTALSHLFRVQFRLGMFDAEEGQIYTKYGLERLNTLEHQELALEAARQGIVLLKNQGPVLPLPCPGLANEQGGEHLPAAPLGADAWTSTFLRHHRRVEAPPEGPLPARERVS---LVAVVGPHANGTQALLGNYRGIPPYIVSPIEGIRAYVPDALFAPGCGINSS-SEQAFADAESAVSSAHVTVLILGLDVSIEDEGKDRTSLELPAPQVELAGRVLDAAM--GRPVVVVLVGGGAVDVDFLARDDRVAAMLFAGYPGQAGGQALAEILFGDVNPSGRLTQTFYPASFVTQADAGDMRMRPDHSDGFPGRTYRFYDGPTVFPFGHGLSYTSFEIEAIACPEGERDRPHYAGYDVVG------NRGTG-------------GREAAIYLT--NARPHDSRVMSRICVRVKNTGSRVGRATLIGFLRPPYGVGLDAPRRSLRAFGSISLAAQQEAVAIVQVTEVDISLADTAGMFHRVRGEWTFEIEGFQLPVLVV 867

The following BLAST results are available for this feature:

BLAST of NO06G01970.1 vs.

BLAST of NO06G01970.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM26224.1	2.100e-293	63.00	putative beta-d-xylosidase 2 [Nannochloropsis gadi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO06G01970	NO06G01970	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO06G01970.1	NO06G01970.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO06G01970.1.cds1	NO06G01970.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G01970.1.cds2	NO06G01970.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G01970.1.cds3	NO06G01970.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr6:586777..590373-
coding sequence from alignment at chr6:586777..590373-

mRNA sequence

>NO06G01970.1 ID=NO06G01970.1|Name=NO06G01970.1|organism=Nannochloropsis oceanica|type=mRNA|length=3254bp
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTACCTCCCCACCCTCCTCC
TCCTCTTCCCCACCCGTGGCTTGTACCTTTTGCTTCTGCTTCTTGGATTG
CTGCTTGGACTTCTTGTCCTTGCCCTCCTCCCAATCCTCAGCCTTGCGCT
TGGAGAGTCCCGCTTCGATCAGTGGCTTTGTGCGGGAGGGGGAGGCGTGG
TAAATGACATGGATACTCGGATGGCCCACACGACCCCACGCATCGTCTCT
CATCAGCAAGTGCGCCCTTGACTCACCTCGTCGTCGTCCGCAAATTCCTC
CGCGTCCGCTTCCAGGTCGTAGGCCTCGAAACCGTCGTCCAAGGTGTCCC
CCATTCTTACTTGTGTTGGAAGTTGTGCGGTGTGATAGGCATGTGTGAGT
TGGGTGGTCAATGCAAAAAACGCATCGCTCGGTCGCAATTCCAAATTTAT
CGCCGCAACGAGGTGAAGTCAAAATGTCCCTACAAACATTACTCACTCAC
TCCCAACCCTCACAAACTACGCAGTAAATAGTGTCATGATAACACACAGA
AGATTCTCATGGCCCCGGGTGCCTGTCTTGCTTCTGGGTTGCCTCCTTAC
GGTTGCTGCCGGTGCAAGTACTCTCCGGAAGCCCGCCCATGCAACCCTGT
CGACTCGTGCTTGCGAGGCCGCCACCGTGGACGCCGATGATGCGTACTGT
GATTCAAGCTTGCCGATGGAGGACCGCGTCGCGGATCTGCTTGCTCGCCT
GACGGTGGAGGAGAAGATCGCCCTCCTTGTTAACTCCGCTTCGGCCGTGC
CCAGTCAAAGCTTGCCCGCGTACGAATGGTGGTCCGAAGCCCTCCACGGC
GTCGGTGGCTCTCCCGGCGTGACATTTGCACCGCCGACCCCGAGTGCCAC
GTCGTTTCCGCAAGTGATCACGACCTCACATTCCTTCAACCCTACGTTGA
TGCAGGCTATTGGCTCTGCCATCAGTACCGAGGGAAGGGTGTTTAATAAC
GTCGGGCATGCCGGCAACACATTTTGGGCGCCAAACATCAATATTTTTAG
AGATCCACGGTGGGGACGTGGGCAGGAAACACCCGGTGAAGATCCCTTCT
TATCGAGTGTGTATGCGACGGCATTTGTGAGAGGCATGCAAGAAGGGGAG
GACGGACGGTACTTGAAAACATCGGCGTGTTGTAAGCATTTCGCAGCGTA
TTCGGTGGAGAATCTGTATAATGGTACCCATCGTCATAATTTTGATGCAC
AGGTTACGAAGCAGGATATGGTTGACACATACCTGCCTGCGTTCGAGGCG
TGTGTGGTGAAGGGGAAGGCCTCCGCGCTCATGTGTAGTTACAACAGTAT
CAATGGTGTGCCGGCTTGTGCGGATGCGGGGTTGCTGAACGGGATGGCTA
GGGAGGAGTGGAGGTTCGATGGGTACGTGACTAGTGATTGTGGGGCGATT
TCGGATATATGGAAGAGGCACAATTATACCGATTCGCCGGAGGGGGCTTG
TCAGGTGGCGTTACAAGCGGGATGTGACTTGGATTGCTCCACTTTCTATG
CGGAGCATTGCCCGGCGGCATTAGCTCAAGGGTTGATTCAGGAGGGGGAC
TTGGATAGGGCCTTGGGGCATCTGTTGAGGGTTCAGTTTCGGTTGGGGTT
GTTTGACTCGCTGGAAGAGCAGGTGTACACAAAGTACGGCTTGGAGAAGG
TGAATTCGGAGGAGCATCAGATGCTGGCCTTGGAGGCAGCGAGGCAGGGG
ATGGTGCTGTTGAAGAATGATCACGGGGTGTTGCCTTTGTCGTTGTCAGT
CGAGGTGGAGGGGGAATGGGGTATGGAGGAGGACGGTATGGAGGAAGGTG
CTGTGCTTAAGACGGCGTTTCTCCGCCGGGAGCGTGAGCGGCAGCTTCGC
CGTGGCCACCGTGAGGAGATTTCTCCTCCTCTCTCCTTGGCGGTGATTGG
TCCCCATGCGAATGCCACAGAGGCCTTGTTAGGCAATTATCAGGGTGTCC
CTCCTTTCATCATCAGTCCTTTTGAAGGATTACGAAAGTATGTCTCCGAT
GCTGTCTTGGTGGAGGGGTGTGGAATCAATAGTACCCTTACGGAAGACCA
AATGAATGCAGCAGATGCAGCAGCGCGAGCTGCAGATGTAACTATACTGG
TGCTTGGTTTAGATTCTAGCATTGAAGGGGAGGGGTTGGACAGGACTAGC
ATTCTCTTGCCTGCCCCGCAGGTGGAGTTAGCGGCACGAGTGTTGGGGGC
GGCCGCGACGGGGGAGAAGAAGGTGGTGGTGGTCCTGATCGCGGGCGGGG
CTGTGGATGTCGAATTTTTAAAGGAGGATGGACGGGTGGCAGCGATGGTT
TTTGCGGGTTATCCGGGCCAAGCTGGGGGACAAGCCCTTGCTGAGATTCT
CTTTGGAGATATTAACCCCAGCGGCCGCCTCACCCAAACATTCTACCCCG
CCGAATTCGTGTCCCAGGCGGGGGCAGGCGACATGCGGATGCGTCCCCAC
CCCACCAGCGGATTTCCTGGACGGACTTATCGCTTTTATGAGGGCTCGGT
TGTCTTCCCTTTCGGGTACGGCCTGAGCTATTCCTCTTTTGAAATGCAAG
AAGTGGCTTGCCCGGCTATTGACCGGGGGGGCGACGACGAGGTGGGGGAT
GGTAATAGTAACAGCAACAGAAGCAGCAGTGATAGCAGCAGTAGCAGCAG
TAGCAGCGGCAGCATCGTGGGGGCAAAGAAGCTGGTGCACTTGACGACGC
ATAGTTTGGAGGAATCTGAAGGGAAGGAGGTGGGTCGGGTGTGTGTGGAA
GTCATCAACAAGGGCCCCCGCGCCGGCCGCATTGCCCTGCTTGGTTTCTT
GTCCCCGCCGGAGAGTGAAGGCGCGCCTCGTCGATCTTTGAGGGCATTTG
GAGGGGTGGACTTAGCCCCGCAGGAGGCAGCCGTGGCCATGATGACTTTT
ATCGAGGCTGACGTGAGCTTGGCGGACGCAGCAGGAGTCTTCGAGCGGGT
GCCGGGACAGTGGGTGTTAGAGATAGAGGATATCCGTGTTGTTGTGCCAG
TCATGTGAGTGATTCGTTGAGAAAAGGTTGTGAAAATAGTGAGAGGGGCC
GCAAATGGAGGGCGAGATTGAAGGAACCGCTGAGAGAAAGAGCAACATGT
ACAATCGTGAAAGGCTGTATGTGGCAAAGTAATGAAAAGACAAGGAATGA
CAAAGAGCAGAATACCATAATCATGAAACCACAAAACAACACAACGTAGT
ATAA

protein sequence of NO06G01970.1

>NO06G01970.1-protein ID=NO06G01970.1-protein|Name=NO06G01970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=841bp
MITHRRFSWPRVPVLLLGCLLTVAAGASTLRKPAHATLSTRACEAATVDA
DDAYCDSSLPMEDRVADLLARLTVEEKIALLVNSASAVPSQSLPAYEWWS
EALHGVGGSPGVTFAPPTPSATSFPQVITTSHSFNPTLMQAIGSAISTEG
RVFNNVGHAGNTFWAPNINIFRDPRWGRGQETPGEDPFLSSVYATAFVRG
MQEGEDGRYLKTSACCKHFAAYSVENLYNGTHRHNFDAQVTKQDMVDTYL
PAFEACVVKGKASALMCSYNSINGVPACADAGLLNGMAREEWRFDGYVTS
DCGAISDIWKRHNYTDSPEGACQVALQAGCDLDCSTFYAEHCPAALAQGL
IQEGDLDRALGHLLRVQFRLGLFDSLEEQVYTKYGLEKVNSEEHQMLALE
AARQGMVLLKNDHGVLPLSLSVEVEGEWGMEEDGMEEGAVLKTAFLRRER
ERQLRRGHREEISPPLSLAVIGPHANATEALLGNYQGVPPFIISPFEGLR
KYVSDAVLVEGCGINSTLTEDQMNAADAAARAADVTILVLGLDSSIEGEG
LDRTSILLPAPQVELAARVLGAAATGEKKVVVVLIAGGAVDVEFLKEDGR
VAAMVFAGYPGQAGGQALAEILFGDINPSGRLTQTFYPAEFVSQAGAGDM
RMRPHPTSGFPGRTYRFYEGSVVFPFGYGLSYSSFEMQEVACPAIDRGGD
DEVGDGNSNSNRSSSDSSSSSSSSGSIVGAKKLVHLTTHSLEESEGKEVG
RVCVEVINKGPRAGRIALLGFLSPPESEGAPRRSLRAFGGVDLAPQEAAV
AMMTFIEADVSLADAAGVFERVPGQWVLEIEDIRVVVPVM*

mRNA from alignment at chr6:586777..590373-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO06G01970.1 ID=NO06G01970.1|Name=NO06G01970.1|organism=Nannochloropsis oceanica|type=mRNA|length=3597bp|location=Sequence derived from alignment at chr6:586777..590373- (Nannochloropsis oceanica)
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTACCTCCCCACCCTCCTCC
TCCTCTTCCCCACCCGTGGCTTGTACCTTTTGCTTCTGCTTCTTGGATTG
CTGCTTGGACTTCTTGTCCTTGCCCTCCTCCCAATCCTCAGCCTTGCGCT
TGGAGAGTCCCGCTTCGATCAGTGGCTTTGTGCGGGAGGGGGAGGCGTGG
TAAATGACATGGATACTCGGATGGCCCACACGACCCCACGCATCGTCTCT
CATCAGCAAGTGCGCCCTTGACTCACCTCGTCGTCGTCCGCAAATTCCTC
CGCGTCCGCTTCCAGGTCGTAGGCCTCGAAACCGTCGTCCAAGGTGTCCC
CCATTCTTACTTGTGTTGGAAGTTGTGCGGTGTGATAGGCATGTGTGAGT
TGGGTGGTCAATGCAAAAAACGCATCGCTCGGTCGCAATTCCAAATTTAT
CGCCGCAACGAGGTGAAGTCAAAATGTCCCTACAAACATTACTCACTCAC
TCCCAACCCTCACAAACTACGCAGTAAATAGTGTCATGATAACACACAGA
AGATTCTCATGGCCCCGGGTGCCTGTCTTGCTTCTGGGTTGCCTCCTTAC
GGTTGCTGCCGGTGCAAGTACTCTCCGGAAGCCCGCCCATGCAACCCTGT
CGACTCGTGCTTGCGAGGCCGCCACCGTGGACGCCGATGATGCGTACTGT
GATTCAAGCTTGCCGATGGAGGACCGCGTCGCGGATCTGCTTGCTCGCCT
GACGGTGGAGGAGAAGGTGCGTAGCTTACAAAAGATCTTTGAGGTGGATA
AGGGGGGGGTTGTCATAATCAGACTTGATGAGCGAGACTGCCACTGTCGC
TGTCGGTCTCGTGCTCTGCCAATTTTGGTTCTGATGGTGGCAGTAGTGCT
CACGGTTTTATTTCTAGACCTGCGGTAAATTGAGCTTTTTCATATAACCC
TACCTACACCTCCAAATCAACCCAGATCGCCCTCCTTGTTAACTCCGCTT
CGGCCGTGCCCAGTCAAAGCTTGCCCGCGTACGAATGGTGGTCCGAAGCC
CTCCACGGCGTCGGTGGCTCTCCCGGCGTGACATTTGCACCGCCGACCCC
GAGTGCCACGTCGTTTCCGCAAGTGATCACGACCTCACATTCCTTCAACC
CTACGTTGATGCAGGCTATTGGCTCTGCCATCAGTACCGAGGGAAGGGTG
TTTAATAACGTCGGGCATGCCGGCAACACATTTTGGGCGCCAAACATCAA
TATTTTTAGAGATCCACGGTGGGGACGTGGGCAGGAAACACCCGGTGAAG
ATCCCTTCTTATCGAGTGTGTATGCGACGGCATTTGTGAGAGGCATGCAA
GAAGGGGAGGACGGACGGTACTTGAAAACATCGGCGTGTTGTAAGCATTT
CGCAGCGTATTCGGTGGAGAATCTGTATAATGGTACCCATCGTCATAATT
TTGATGCACAGGTTACGAAGCAGGATATGGTTGACACATACCTGCCTGCG
TTCGAGGCGTGTGTGGTGAAGGGGAAGGCCTCCGCGCTCATGTGTAGTTA
CAACAGTATCAATGGTGTGCCGGCTTGTGCGGATGCGGGGTTGCTGAACG
GGATGGCTAGGGAGGAGTGGAGGTTCGATGGGTACGTGACTAGTGATTGT
GGGGCGATTTCGGATATATGGAAGAGGCACAATTATACCGATTCGCCGGA
GGGGGCTTGTCAGGTGGCGTTACAAGCGGGATGTGACTTGGATTGCTCCA
CTTTCTATGCGGAGCATTGCCCGGCGGCATTAGCTCAAGGGTTGATTCAG
GAGGGGGACTTGGATAGGGCCTTGGGGCATCTGTTGAGGGTTCAGTTTCG
GTTGGGGTTGTTTGACTCGCTGGAAGAGCAGGTGTACACAAAGTACGGCT
TGGAGAAGGTGAATTCGGAGGAGCATCAGATGCTGGCCTTGGAGGCAGCG
AGGCAGGGGATGGTGCTGTTGAAGAATGATCACGGGGTGTTGCCTTTGTC
GTTGTCAGTCGAGGTGGAGGGGGAATGGGGTATGGAGGAGGACGGTATGG
AGGAAGGTGCTGTGCTTAAGACGGCGTTTCTCCGCCGGGAGCGTGAGCGG
CAGCTTCGCCGTGGCCACCGTGAGGAGATTTCTCCTCCTCTCTCCTTGGC
GGTGATTGGTCCCCATGCGAATGCCACAGAGGCCTTGTTAGGCAATTATC
AGGGTGTCCCTCCTTTCATCATCAGTCCTTTTGAAGGATTACGAAAGTAT
GTCTCCGATGCTGTCTTGGTGGAGGGGTGTGGAATCAATAGTACCCTTAC
GGAAGACCAAATGAATGCAGCAGATGCAGCAGCGCGAGCTGCAGATGTAA
CTATACTGGTGCTTGGTTTAGATTCTAGCATTGAAGGGGAGGGGTTGGAC
AGGACTAGCATTCTCTTGCCTGCCCCGCAGGTGGAGTTAGCGGCACGAGT
GTTGGGGGCGGCCGCGACGGGGGAGAAGAAGGTGGTGGTGGTCCTGATCG
CGGGCGGGGCTGTGGATGTCGAATTTTTAAAGGAGGATGGACGGGTGGCA
GCGATGGTTTTTGCGGGTTATCCGGGTAAGAGGAATGTGTGTGTGCTTGA
GTGACGAGGCGGGGTATGATGGGAGGAGAGCGGTTGATGAGGCGATTTGT
CCTCGTGTGTCCGCGTGCTTATGTATGCCCGTGTTCATTTCCTCATCCTA
TCACCACAGGCCAAGCTGGGGGACAAGCCCTTGCTGAGATTCTCTTTGGA
GATATTAACCCCAGCGGCCGCCTCACCCAAACATTCTACCCCGCCGAATT
CGTGTCCCAGGCGGGGGCAGGCGACATGCGGATGCGTCCCCACCCCACCA
GCGGATTTCCTGGACGGACTTATCGCTTTTATGAGGGCTCGGTTGTCTTC
CCTTTCGGGTACGGCCTGAGCTATTCCTCTTTTGAAATGCAAGAAGTGGC
TTGCCCGGCTATTGACCGGGGGGGCGACGACGAGGTGGGGGATGGTAATA
GTAACAGCAACAGAAGCAGCAGTGATAGCAGCAGTAGCAGCAGTAGCAGC
GGCAGCATCGTGGGGGCAAAGAAGCTGGTGCACTTGACGACGCATAGTTT
GGAGGAATCTGAAGGGAAGGAGGTGGGTCGGGTGTGTGTGGAAGTCATCA
ACAAGGGCCCCCGCGCCGGCCGCATTGCCCTGCTTGGTTTCTTGTCCCCG
CCGGAGAGTGAAGGCGCGCCTCGTCGATCTTTGAGGGCATTTGGAGGGGT
GGACTTAGCCCCGCAGGAGGCAGCCGTGGCCATGATGACTTTTATCGAGG
CTGACGTGAGCTTGGCGGACGCAGCAGGAGTCTTCGAGCGGGTGCCGGGA
CAGTGGGTGTTAGAGATAGAGGATATCCGTGTTGTTGTGCCAGTCATGTG
AGTGATTCGTTGAGAAAAGGTTGTGAAAATAGTGAGAGGGGCCGCAAATG
GAGGGCGAGATTGAAGGAACCGCTGAGAGAAAGAGCAACATGTACAATCG
TGAAAGGCTGTATGTGGCAAAGTAATGAAAAGACAAGGAATGACAAAGAG
CAGAATACCATAATCATGAAACCACAAAACAACACAACGTAGTATAA

Coding sequence (CDS) from alignment at chr6:586777..590373-

>NO06G01970.1 ID=NO06G01970.1|Name=NO06G01970.1|organism=Nannochloropsis oceanica|type=CDS|length=2523bp|location=Sequence derived from alignment at chr6:586777..590373- (Nannochloropsis oceanica)
ATGATAACACACAGAAGATTCTCATGGCCCCGGGTGCCTGTCTTGCTTCT
GGGTTGCCTCCTTACGGTTGCTGCCGGTGCAAGTACTCTCCGGAAGCCCG
CCCATGCAACCCTGTCGACTCGTGCTTGCGAGGCCGCCACCGTGGACGCC
GATGATGCGTACTGTGATTCAAGCTTGCCGATGGAGGACCGCGTCGCGGA
TCTGCTTGCTCGCCTGACGGTGGAGGAGAAGATCGCCCTCCTTGTTAACT
CCGCTTCGGCCGTGCCCAGTCAAAGCTTGCCCGCGTACGAATGGTGGTCC
GAAGCCCTCCACGGCGTCGGTGGCTCTCCCGGCGTGACATTTGCACCGCC
GACCCCGAGTGCCACGTCGTTTCCGCAAGTGATCACGACCTCACATTCCT
TCAACCCTACGTTGATGCAGGCTATTGGCTCTGCCATCAGTACCGAGGGA
AGGGTGTTTAATAACGTCGGGCATGCCGGCAACACATTTTGGGCGCCAAA
CATCAATATTTTTAGAGATCCACGGTGGGGACGTGGGCAGGAAACACCCG
GTGAAGATCCCTTCTTATCGAGTGTGTATGCGACGGCATTTGTGAGAGGC
ATGCAAGAAGGGGAGGACGGACGGTACTTGAAAACATCGGCGTGTTGTAA
GCATTTCGCAGCGTATTCGGTGGAGAATCTGTATAATGGTACCCATCGTC
ATAATTTTGATGCACAGGTTACGAAGCAGGATATGGTTGACACATACCTG
CCTGCGTTCGAGGCGTGTGTGGTGAAGGGGAAGGCCTCCGCGCTCATGTG
TAGTTACAACAGTATCAATGGTGTGCCGGCTTGTGCGGATGCGGGGTTGC
TGAACGGGATGGCTAGGGAGGAGTGGAGGTTCGATGGGTACGTGACTAGT
GATTGTGGGGCGATTTCGGATATATGGAAGAGGCACAATTATACCGATTC
GCCGGAGGGGGCTTGTCAGGTGGCGTTACAAGCGGGATGTGACTTGGATT
GCTCCACTTTCTATGCGGAGCATTGCCCGGCGGCATTAGCTCAAGGGTTG
ATTCAGGAGGGGGACTTGGATAGGGCCTTGGGGCATCTGTTGAGGGTTCA
GTTTCGGTTGGGGTTGTTTGACTCGCTGGAAGAGCAGGTGTACACAAAGT
ACGGCTTGGAGAAGGTGAATTCGGAGGAGCATCAGATGCTGGCCTTGGAG
GCAGCGAGGCAGGGGATGGTGCTGTTGAAGAATGATCACGGGGTGTTGCC
TTTGTCGTTGTCAGTCGAGGTGGAGGGGGAATGGGGTATGGAGGAGGACG
GTATGGAGGAAGGTGCTGTGCTTAAGACGGCGTTTCTCCGCCGGGAGCGT
GAGCGGCAGCTTCGCCGTGGCCACCGTGAGGAGATTTCTCCTCCTCTCTC
CTTGGCGGTGATTGGTCCCCATGCGAATGCCACAGAGGCCTTGTTAGGCA
ATTATCAGGGTGTCCCTCCTTTCATCATCAGTCCTTTTGAAGGATTACGA
AAGTATGTCTCCGATGCTGTCTTGGTGGAGGGGTGTGGAATCAATAGTAC
CCTTACGGAAGACCAAATGAATGCAGCAGATGCAGCAGCGCGAGCTGCAG
ATGTAACTATACTGGTGCTTGGTTTAGATTCTAGCATTGAAGGGGAGGGG
TTGGACAGGACTAGCATTCTCTTGCCTGCCCCGCAGGTGGAGTTAGCGGC
ACGAGTGTTGGGGGCGGCCGCGACGGGGGAGAAGAAGGTGGTGGTGGTCC
TGATCGCGGGCGGGGCTGTGGATGTCGAATTTTTAAAGGAGGATGGACGG
GTGGCAGCGATGGTTTTTGCGGGTTATCCGGGCCAAGCTGGGGGACAAGC
CCTTGCTGAGATTCTCTTTGGAGATATTAACCCCAGCGGCCGCCTCACCC
AAACATTCTACCCCGCCGAATTCGTGTCCCAGGCGGGGGCAGGCGACATG
CGGATGCGTCCCCACCCCACCAGCGGATTTCCTGGACGGACTTATCGCTT
TTATGAGGGCTCGGTTGTCTTCCCTTTCGGGTACGGCCTGAGCTATTCCT
CTTTTGAAATGCAAGAAGTGGCTTGCCCGGCTATTGACCGGGGGGGCGAC
GACGAGGTGGGGGATGGTAATAGTAACAGCAACAGAAGCAGCAGTGATAG
CAGCAGTAGCAGCAGTAGCAGCGGCAGCATCGTGGGGGCAAAGAAGCTGG
TGCACTTGACGACGCATAGTTTGGAGGAATCTGAAGGGAAGGAGGTGGGT
CGGGTGTGTGTGGAAGTCATCAACAAGGGCCCCCGCGCCGGCCGCATTGC
CCTGCTTGGTTTCTTGTCCCCGCCGGAGAGTGAAGGCGCGCCTCGTCGAT
CTTTGAGGGCATTTGGAGGGGTGGACTTAGCCCCGCAGGAGGCAGCCGTG
GCCATGATGACTTTTATCGAGGCTGACGTGAGCTTGGCGGACGCAGCAGG
AGTCTTCGAGCGGGTGCCGGGACAGTGGGTGTTAGAGATAGAGGATATCC
GTGTTGTTGTGCCAGTCATGTGA

Synonyms

Publications