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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr6 | genome | chr6:451315..453912 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO06G01410.1 vs.
Match: CBJ28037.1 (Arginine/alanine aminopeptidase, overproduction stimulates glycogen accumulation [Ectocarpus siliculosus]) HSP 1 Score: 250.4 bits (638), Expect = 2.100e-62 Identity = 151/383 (39.43%), Postives = 205/383 (53.52%), Query Frame = 0
Query: 328 FHQTPLMPLYVLGFWISRFEALEYCNDDAGKGNAAARAAAAAAAGEGVGAATAAEP---VRVTVYLPPHRPLEEGHFALECARRSFEFFSALYQPVDCGQEAGERVGGRNGNNFYPLPKLDIICLPQMHGIGMEGWGSISILEEYLLVTPTTDFVRRRRIARLLAHETAHQWFGNLVTPFSFDELWLKESTARFFEYVALAALQPSGWHVWSNFVSEIMLSAMLADANPFISHPVLQHHHGDARAIMGSFDVLVYGKGAALLRMLSGWVGMRVFVKGIRRFMARFMYANVTEGEFWAVLEEVVEEEREEEQKRQAAEDDERSRVAGMTTNRLNKLSGACPRVSEMMSPWLARVAYPALHVGVEHSPGHTLCLRFSQRPFSLLP 708
F TP MP YV GFW+ F +C AA R++ + E V++ V++ L+ FALE A R+FE FS L+ +P+PKLD+I LPQMHG+GME +G+I+ L+EYL+VTP T FVRRRRIARL+ HE +H W+G+LVTP SFDELWLKE ARFFEY+A+ AL PS +HVW+NF+SE+ + AMLAD+ SHPV+Q H GD +I+ SFD + Y KGA++LRML VG F++G+ F+ Y T+ + W ++ V + + G V +M PWL R +P L V + L +Q+PFS P
Sbjct: 138 FQPTPAMPTYVFGFWVGDF----HCVSARALMTAAVRSSDVSLPPPPPARLEEEEEEDAVQINVHVVRGVDLKGVEFALEFATRAFELFSKLFSVR------------------FPIPKLDLIGLPQMHGLGMENFGAITCLQEYLVVTPDTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPS-YHVWNNFMSEVFVQAMLADSLE-NSHPVVQQHDGDIASILESFDTITYCKGASILRMLYRCVGPDRFLRGMADFVVSHQYLCATQEDLWKAVQGVCDRD------------------------------GVALDVRGLMQPWLTRPKFPMLRVRMVGD-----ALSITQQPFSFFP 461
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G01410.1 ID=NO06G01410.1|Name=NO06G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2598bp
ATGGATCACAAAGAAGCGCTGCGACATCGACCGCCCAACCTCCCCACCCC
CGCGTTTGATCCTAGAGCTCATACTGCCGAAGCCGACACTGGGCACCAAG
ACGACCTTGATATCCTGCTGTCCGCTGAAATAGTACGACCACTTGCATAC
GATGTGCACCTGGCCTTGGCCGGACCTCCTTATCTAGCTACAGAAGGAGT
CGTTGACATAACACTAGCCATCGGCAAGCCCACCTCCTCCATACGTCTTC
ACGCGGCGGGCTTGTGCCTCTTATCGGTGTTCATAGAACGGGATCATGGG
ATCTTTGAACCTGCTAAGGTGTTCTTCATATCGCCGCAAGTGATTGAGGT
AAACGTGACGTCGCCATTGCCTGTCGGGCTGCACGTTGTGCGTCTCTCCT
TTGCCGCAAGGGTTGGTACTCGGAGTCAAGGCATCTATGCTTGTTCCTGG
GGTCTGAGCGGCAACTACTACAGCGGCGATGATGCACAAGAAGAATATGG
GGCAGATGACACAAATAGCAGTGGGGAGATGGCGTCGTCAAGGCAGGGTT
GGATCCTCGCCACGCATTTCGAACCCACACACTGCCGTAGGGCCTTTCCT
TGTTTTGATCTGGCCCATTTCAAAGCTCACGTTCGCCTCACACTTTTAGT
TGCAGGGCAAGATCCAATGCGAGACGTACTTTCAAATACAGAGGTGGAAT
TGACTGGAGAGATCTCAGAATTTCCTCCAGATCAGCTGGGCGAGAGCGGG
GCGGCGTTCGTGAGGCAACTGTTGCGAATGGCGACGGACCAGCAGCAAGA
GCTGCCACAGCAGCAGCAAGAGCAGCACAACAAAAGGGAGCGACACCGGC
ATCATCATTTCAAGCGATACCATCATCACCACAAGCATTCGCCGTGTGAA
TGCAGTAGCAGCTGGAGTAGCAGCGCTGCCATTGGCACTGACGGCTCGCC
CCCTTTTCCCTCTTCGTGGCACTTAACGCGGTTCCACCAAACTCCTCTCA
TGCCTTTGTATGTGTTGGGCTTTTGGATAAGCCGTTTTGAAGCATTGGAG
TATTGCAATGATGATGCTGGAAAGGGAAACGCAGCAGCAAGAGCAGCTGC
GGCAGCAGCAGCAGGAGAAGGAGTGGGAGCCGCGACAGCAGCAGAGCCCG
TGCGCGTCACCGTATACTTACCCCCGCATCGTCCTCTCGAGGAAGGGCAT
TTCGCTTTGGAATGTGCTCGTCGATCTTTCGAATTCTTCTCTGCGCTCTA
TCAGCCAGTCGACTGTGGTCAAGAAGCAGGAGAGAGAGTGGGAGGGAGGA
ATGGCAACAATTTCTATCCCCTTCCTAAGCTTGATATTATCTGTCTCCCC
CAGATGCACGGAATCGGGATGGAGGGATGGGGGAGTATCTCCATCCTGGA
AGAGTACCTTCTTGTGACGCCCACCACCGACTTTGTGCGTCGTCGTCGCA
TTGCCCGCTTATTAGCCCACGAGACGGCGCATCAATGGTTTGGTAATCTA
GTCACTCCTTTTTCGTTCGATGAGCTTTGGTTGAAAGAGTCCACGGCAAG
ATTCTTCGAATACGTCGCCTTGGCAGCTCTGCAGCCGTCAGGATGGCATG
TCTGGAGCAATTTTGTGAGTGAGATCATGCTTTCAGCCATGCTGGCGGAT
GCAAATCCCTTCATTTCGCACCCAGTTTTGCAGCATCATCACGGAGATGC
GCGGGCAATAATGGGCTCGTTTGATGTCCTGGTGTATGGGAAGGGGGCTG
CCTTGTTGCGGATGCTGAGTGGATGGGTGGGCATGCGGGTGTTTGTTAAG
GGGATCAGAAGATTCATGGCTCGGTTTATGTACGCCAACGTGACGGAGGG
CGAGTTTTGGGCGGTGTTGGAGGAGGTCGTGGAGGAGGAAAGAGAGGAGG
AGCAAAAACGGCAAGCAGCAGAGGATGACGAAAGAAGCAGGGTAGCGGGA
ATGACGACAAACAGGTTGAATAAATTGTCAGGTGCTTGTCCGCGTGTGAG
TGAGATGATGTCCCCGTGGTTGGCGCGAGTGGCCTATCCTGCTCTGCACG
TGGGTGTGGAACATAGTCCTGGCCACACGCTATGTCTTCGCTTCTCGCAG
CGCCCTTTCAGTCTACTGCCGGAAGATGTGGTGACCGAGACTAGCAATGA
TAATGGTCAGAGGAGTTACCTACCACGCCTGATTCCTTTGCGGGTCCGCG
TTGGCGTTGGAGAGGGGAAGGATGATATGATGGTTGGGGAGGGAATGCTA
TATACACTTTTCGTTGGGGAGGGCTCGGATGGAGAGGTGCTTTTGGAGAT
ACCCTGTGAGGAGAAACGCCAAATGACAACGACGACAATGGCGGGGACGA
GCAGCTGCAGTACCAGCAGTAAGTCTATGTGGTGGGCCGTAATCAATGAC
CAACATACAGGATACTTCACCACGGTCTACGACGGACCCGAAGCTTGGCA
ACTCGTGCTCCACGCCCTAGAAGGAGGACAAATGCACGAGGTTGAAAGGA
CGGGGCTGGTTTGCGATTTGATGTTGGGGGTGGAGGCAGCGTTGAGAGCA
GGGGGAGGGGGAGGGGGGGACGAGTGGGTAAGGAGGTTGGGATGCTGA back to topprotein sequence of NO06G01410.1 >NO06G01410.1-protein ID=NO06G01410.1-protein|Name=NO06G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=866bp
MDHKEALRHRPPNLPTPAFDPRAHTAEADTGHQDDLDILLSAEIVRPLAY
DVHLALAGPPYLATEGVVDITLAIGKPTSSIRLHAAGLCLLSVFIERDHG
IFEPAKVFFISPQVIEVNVTSPLPVGLHVVRLSFAARVGTRSQGIYACSW
GLSGNYYSGDDAQEEYGADDTNSSGEMASSRQGWILATHFEPTHCRRAFP
CFDLAHFKAHVRLTLLVAGQDPMRDVLSNTEVELTGEISEFPPDQLGESG
AAFVRQLLRMATDQQQELPQQQQEQHNKRERHRHHHFKRYHHHHKHSPCE
CSSSWSSSAAIGTDGSPPFPSSWHLTRFHQTPLMPLYVLGFWISRFEALE
YCNDDAGKGNAAARAAAAAAAGEGVGAATAAEPVRVTVYLPPHRPLEEGH
FALECARRSFEFFSALYQPVDCGQEAGERVGGRNGNNFYPLPKLDIICLP
QMHGIGMEGWGSISILEEYLLVTPTTDFVRRRRIARLLAHETAHQWFGNL
VTPFSFDELWLKESTARFFEYVALAALQPSGWHVWSNFVSEIMLSAMLAD
ANPFISHPVLQHHHGDARAIMGSFDVLVYGKGAALLRMLSGWVGMRVFVK
GIRRFMARFMYANVTEGEFWAVLEEVVEEEREEEQKRQAAEDDERSRVAG
MTTNRLNKLSGACPRVSEMMSPWLARVAYPALHVGVEHSPGHTLCLRFSQ
RPFSLLPEDVVTETSNDNGQRSYLPRLIPLRVRVGVGEGKDDMMVGEGML
YTLFVGEGSDGEVLLEIPCEEKRQMTTTTMAGTSSCSTSSKSMWWAVIND
QHTGYFTTVYDGPEAWQLVLHALEGGQMHEVERTGLVCDLMLGVEAALRA
GGGGGGDEWVRRLGC* back to topmRNA from alignment at chr6:451315..453912+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G01410.1 ID=NO06G01410.1|Name=NO06G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2598bp|location=Sequence derived from alignment at chr6:451315..453912+ (Nannochloropsis oceanica)
ATGGATCACAAAGAAGCGCTGCGACATCGACCGCCCAACCTCCCCACCCC
CGCGTTTGATCCTAGAGCTCATACTGCCGAAGCCGACACTGGGCACCAAG
ACGACCTTGATATCCTGCTGTCCGCTGAAATAGTACGACCACTTGCATAC
GATGTGCACCTGGCCTTGGCCGGACCTCCTTATCTAGCTACAGAAGGAGT
CGTTGACATAACACTAGCCATCGGCAAGCCCACCTCCTCCATACGTCTTC
ACGCGGCGGGCTTGTGCCTCTTATCGGTGTTCATAGAACGGGATCATGGG
ATCTTTGAACCTGCTAAGGTGTTCTTCATATCGCCGCAAGTGATTGAGGT
AAACGTGACGTCGCCATTGCCTGTCGGGCTGCACGTTGTGCGTCTCTCCT
TTGCCGCAAGGGTTGGTACTCGGAGTCAAGGCATCTATGCTTGTTCCTGG
GGTCTGAGCGGCAACTACTACAGCGGCGATGATGCACAAGAAGAATATGG
GGCAGATGACACAAATAGCAGTGGGGAGATGGCGTCGTCAAGGCAGGGTT
GGATCCTCGCCACGCATTTCGAACCCACACACTGCCGTAGGGCCTTTCCT
TGTTTTGATCTGGCCCATTTCAAAGCTCACGTTCGCCTCACACTTTTAGT
TGCAGGGCAAGATCCAATGCGAGACGTACTTTCAAATACAGAGGTGGAAT
TGACTGGAGAGATCTCAGAATTTCCTCCAGATCAGCTGGGCGAGAGCGGG
GCGGCGTTCGTGAGGCAACTGTTGCGAATGGCGACGGACCAGCAGCAAGA
GCTGCCACAGCAGCAGCAAGAGCAGCACAACAAAAGGGAGCGACACCGGC
ATCATCATTTCAAGCGATACCATCATCACCACAAGCATTCGCCGTGTGAA
TGCAGTAGCAGCTGGAGTAGCAGCGCTGCCATTGGCACTGACGGCTCGCC
CCCTTTTCCCTCTTCGTGGCACTTAACGCGGTTCCACCAAACTCCTCTCA
TGCCTTTGTATGTGTTGGGCTTTTGGATAAGCCGTTTTGAAGCATTGGAG
TATTGCAATGATGATGCTGGAAAGGGAAACGCAGCAGCAAGAGCAGCTGC
GGCAGCAGCAGCAGGAGAAGGAGTGGGAGCCGCGACAGCAGCAGAGCCCG
TGCGCGTCACCGTATACTTACCCCCGCATCGTCCTCTCGAGGAAGGGCAT
TTCGCTTTGGAATGTGCTCGTCGATCTTTCGAATTCTTCTCTGCGCTCTA
TCAGCCAGTCGACTGTGGTCAAGAAGCAGGAGAGAGAGTGGGAGGGAGGA
ATGGCAACAATTTCTATCCCCTTCCTAAGCTTGATATTATCTGTCTCCCC
CAGATGCACGGAATCGGGATGGAGGGATGGGGGAGTATCTCCATCCTGGA
AGAGTACCTTCTTGTGACGCCCACCACCGACTTTGTGCGTCGTCGTCGCA
TTGCCCGCTTATTAGCCCACGAGACGGCGCATCAATGGTTTGGTAATCTA
GTCACTCCTTTTTCGTTCGATGAGCTTTGGTTGAAAGAGTCCACGGCAAG
ATTCTTCGAATACGTCGCCTTGGCAGCTCTGCAGCCGTCAGGATGGCATG
TCTGGAGCAATTTTGTGAGTGAGATCATGCTTTCAGCCATGCTGGCGGAT
GCAAATCCCTTCATTTCGCACCCAGTTTTGCAGCATCATCACGGAGATGC
GCGGGCAATAATGGGCTCGTTTGATGTCCTGGTGTATGGGAAGGGGGCTG
CCTTGTTGCGGATGCTGAGTGGATGGGTGGGCATGCGGGTGTTTGTTAAG
GGGATCAGAAGATTCATGGCTCGGTTTATGTACGCCAACGTGACGGAGGG
CGAGTTTTGGGCGGTGTTGGAGGAGGTCGTGGAGGAGGAAAGAGAGGAGG
AGCAAAAACGGCAAGCAGCAGAGGATGACGAAAGAAGCAGGGTAGCGGGA
ATGACGACAAACAGGTTGAATAAATTGTCAGGTGCTTGTCCGCGTGTGAG
TGAGATGATGTCCCCGTGGTTGGCGCGAGTGGCCTATCCTGCTCTGCACG
TGGGTGTGGAACATAGTCCTGGCCACACGCTATGTCTTCGCTTCTCGCAG
CGCCCTTTCAGTCTACTGCCGGAAGATGTGGTGACCGAGACTAGCAATGA
TAATGGTCAGAGGAGTTACCTACCACGCCTGATTCCTTTGCGGGTCCGCG
TTGGCGTTGGAGAGGGGAAGGATGATATGATGGTTGGGGAGGGAATGCTA
TATACACTTTTCGTTGGGGAGGGCTCGGATGGAGAGGTGCTTTTGGAGAT
ACCCTGTGAGGAGAAACGCCAAATGACAACGACGACAATGGCGGGGACGA
GCAGCTGCAGTACCAGCAGTAAGTCTATGTGGTGGGCCGTAATCAATGAC
CAACATACAGGATACTTCACCACGGTCTACGACGGACCCGAAGCTTGGCA
ACTCGTGCTCCACGCCCTAGAAGGAGGACAAATGCACGAGGTTGAAAGGA
CGGGGCTGGTTTGCGATTTGATGTTGGGGGTGGAGGCAGCGTTGAGAGCA
GGGGGAGGGGGAGGGGGGGACGAGTGGGTAAGGAGGTTGGGATGCTGA back to topCoding sequence (CDS) from alignment at chr6:451315..453912+ >NO06G01410.1 ID=NO06G01410.1|Name=NO06G01410.1|organism=Nannochloropsis oceanica|type=CDS|length=2598bp|location=Sequence derived from alignment at chr6:451315..453912+ (Nannochloropsis oceanica)
ATGGATCACAAAGAAGCGCTGCGACATCGACCGCCCAACCTCCCCACCCC
CGCGTTTGATCCTAGAGCTCATACTGCCGAAGCCGACACTGGGCACCAAG
ACGACCTTGATATCCTGCTGTCCGCTGAAATAGTACGACCACTTGCATAC
GATGTGCACCTGGCCTTGGCCGGACCTCCTTATCTAGCTACAGAAGGAGT
CGTTGACATAACACTAGCCATCGGCAAGCCCACCTCCTCCATACGTCTTC
ACGCGGCGGGCTTGTGCCTCTTATCGGTGTTCATAGAACGGGATCATGGG
ATCTTTGAACCTGCTAAGGTGTTCTTCATATCGCCGCAAGTGATTGAGGT
AAACGTGACGTCGCCATTGCCTGTCGGGCTGCACGTTGTGCGTCTCTCCT
TTGCCGCAAGGGTTGGTACTCGGAGTCAAGGCATCTATGCTTGTTCCTGG
GGTCTGAGCGGCAACTACTACAGCGGCGATGATGCACAAGAAGAATATGG
GGCAGATGACACAAATAGCAGTGGGGAGATGGCGTCGTCAAGGCAGGGTT
GGATCCTCGCCACGCATTTCGAACCCACACACTGCCGTAGGGCCTTTCCT
TGTTTTGATCTGGCCCATTTCAAAGCTCACGTTCGCCTCACACTTTTAGT
TGCAGGGCAAGATCCAATGCGAGACGTACTTTCAAATACAGAGGTGGAAT
TGACTGGAGAGATCTCAGAATTTCCTCCAGATCAGCTGGGCGAGAGCGGG
GCGGCGTTCGTGAGGCAACTGTTGCGAATGGCGACGGACCAGCAGCAAGA
GCTGCCACAGCAGCAGCAAGAGCAGCACAACAAAAGGGAGCGACACCGGC
ATCATCATTTCAAGCGATACCATCATCACCACAAGCATTCGCCGTGTGAA
TGCAGTAGCAGCTGGAGTAGCAGCGCTGCCATTGGCACTGACGGCTCGCC
CCCTTTTCCCTCTTCGTGGCACTTAACGCGGTTCCACCAAACTCCTCTCA
TGCCTTTGTATGTGTTGGGCTTTTGGATAAGCCGTTTTGAAGCATTGGAG
TATTGCAATGATGATGCTGGAAAGGGAAACGCAGCAGCAAGAGCAGCTGC
GGCAGCAGCAGCAGGAGAAGGAGTGGGAGCCGCGACAGCAGCAGAGCCCG
TGCGCGTCACCGTATACTTACCCCCGCATCGTCCTCTCGAGGAAGGGCAT
TTCGCTTTGGAATGTGCTCGTCGATCTTTCGAATTCTTCTCTGCGCTCTA
TCAGCCAGTCGACTGTGGTCAAGAAGCAGGAGAGAGAGTGGGAGGGAGGA
ATGGCAACAATTTCTATCCCCTTCCTAAGCTTGATATTATCTGTCTCCCC
CAGATGCACGGAATCGGGATGGAGGGATGGGGGAGTATCTCCATCCTGGA
AGAGTACCTTCTTGTGACGCCCACCACCGACTTTGTGCGTCGTCGTCGCA
TTGCCCGCTTATTAGCCCACGAGACGGCGCATCAATGGTTTGGTAATCTA
GTCACTCCTTTTTCGTTCGATGAGCTTTGGTTGAAAGAGTCCACGGCAAG
ATTCTTCGAATACGTCGCCTTGGCAGCTCTGCAGCCGTCAGGATGGCATG
TCTGGAGCAATTTTGTGAGTGAGATCATGCTTTCAGCCATGCTGGCGGAT
GCAAATCCCTTCATTTCGCACCCAGTTTTGCAGCATCATCACGGAGATGC
GCGGGCAATAATGGGCTCGTTTGATGTCCTGGTGTATGGGAAGGGGGCTG
CCTTGTTGCGGATGCTGAGTGGATGGGTGGGCATGCGGGTGTTTGTTAAG
GGGATCAGAAGATTCATGGCTCGGTTTATGTACGCCAACGTGACGGAGGG
CGAGTTTTGGGCGGTGTTGGAGGAGGTCGTGGAGGAGGAAAGAGAGGAGG
AGCAAAAACGGCAAGCAGCAGAGGATGACGAAAGAAGCAGGGTAGCGGGA
ATGACGACAAACAGGTTGAATAAATTGTCAGGTGCTTGTCCGCGTGTGAG
TGAGATGATGTCCCCGTGGTTGGCGCGAGTGGCCTATCCTGCTCTGCACG
TGGGTGTGGAACATAGTCCTGGCCACACGCTATGTCTTCGCTTCTCGCAG
CGCCCTTTCAGTCTACTGCCGGAAGATGTGGTGACCGAGACTAGCAATGA
TAATGGTCAGAGGAGTTACCTACCACGCCTGATTCCTTTGCGGGTCCGCG
TTGGCGTTGGAGAGGGGAAGGATGATATGATGGTTGGGGAGGGAATGCTA
TATACACTTTTCGTTGGGGAGGGCTCGGATGGAGAGGTGCTTTTGGAGAT
ACCCTGTGAGGAGAAACGCCAAATGACAACGACGACAATGGCGGGGACGA
GCAGCTGCAGTACCAGCAGTAAGTCTATGTGGTGGGCCGTAATCAATGAC
CAACATACAGGATACTTCACCACGGTCTACGACGGACCCGAAGCTTGGCA
ACTCGTGCTCCACGCCCTAGAAGGAGGACAAATGCACGAGGTTGAAAGGA
CGGGGCTGGTTTGCGATTTGATGTTGGGGGTGGAGGCAGCGTTGAGAGCA
GGGGGAGGGGGAGGGGGGGACGAGTGGGTAAGGAGGTTGGGATGCTGA back to top
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