NO05G04690.1, NO05G04690.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G04690.1
Unique NameNO05G04690.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1275
Alignment locationchr5:1217313..1218587 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1217313..1218587 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO05G04690.1 vs.
Match: EWM27967.1 (alpha beta hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 763.8 bits (1971), Expect = 2.700e-217
Identity = 356/423 (84.16%), Postives = 394/423 (93.14%), Query Frame = 0 
Query:    1 MTVGMAIRGVSPLCDIGDIAAAWTLEVLIPRLCLAILFLSASLLKLTLRYPIRVYVGSHPIMRNIVRRCPSFQKDYRPPSWACGAWAQAIVYLYRSWRNKHLRGFAREVLQLPDGESVSLFYMAPPGPMREALMQCKEDRREEEMGATIQALATSMPPDDPPPPIVVICHGVFQTAADLYEFCTFLTETCGYIACVFNRRGNDMPLSRARFNTVGDQCDFRFILSRMRDFFPNNCFYGVGISAGSSLLARYLGDAGEESELEGGVLISGGYDMELSLQHMTPLADLVVTTHAKSFFLERNEETLKKEDGPGLQRLKRSRSMQEFHEHLHIFDGKASREEYFQTHNPALVLGKIARPVVYINAYDDMCFPGHFTFQFKKLVEECQLATVLHVEKGGHGTFYENWDAGSSRAFQCVREFVDCLQK 424
            MTVGMAI+GVSPL DIGD+AAAWTL++LIPRLCLAILFLS SL+KLTLRYPIRVYVG++P++R+IV+RCPSFQKDYRPPSWACGAWAQA++Y+YRSWRN HLRGFAREV++LPDGE VS ++MAPPGPMR+A+MQCK D REEE  A I+AL   MP D+  PPIV+ICHGVFQ  ADLY+FC F+TETCGY+ CVFNRRGNDMPLSRARFNTVGDQ DFRFILSR+R+FFPNN FYGVGISAGSSLLARYLGDAGEE ELEGGVLISGGYDMELSL+HMTPLADLVVTT AKSFFLERNEETL ++DGPGLQRLKRSRSMQEFHEHLH+FDGKASREEYFQTHNPALVL +IARPVVYINAYDDMCFPGHFTFQ+K LVE CQLAT++H+E+GGHGTFYENWDAGSSRAFQCVREFVDCL K
Sbjct:    1 MTVGMAIQGVSPLSDIGDLAAAWTLDILIPRLCLAILFLSVSLVKLTLRYPIRVYVGANPVVRSIVQRCPSFQKDYRPPSWACGAWAQAVIYMYRSWRNNHLRGFAREVIRLPDGECVSSYWMAPPGPMRDAVMQCKVDGREEETDAIIEALVYHMPCDERLPPIVIICHGVFQNGADLYDFCRFMTETCGYVVCVFNRRGNDMPLSRARFNTVGDQADFRFILSRLREFFPNNGFYGVGISAGSSLLARYLGDAGEECELEGGVLISGGYDMELSLRHMTPLADLVVTTQAKSFFLERNEETLARQDGPGLQRLKRSRSMQEFHEHLHVFDGKASREEYFQTHNPALVLDRIARPVVYINAYDDMCFPGHFTFQYKHLVERCQLATIVHMERGGHGTFYENWDAGSSRAFQCVREFVDCLHK 423
The following BLAST results are available for this feature:
BLAST of NO05G04690.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27967.12.700e-21784.16alpha beta hydrolase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G04690NO05G04690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G04690.1NO05G04690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G04690.1.cds1NO05G04690.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G04690.1 ID=NO05G04690.1|Name=NO05G04690.1|organism=Nannochloropsis oceanica|type=mRNA|length=1275bp
ATGACTGTGGGCATGGCCATCCGGGGCGTCAGCCCTCTATGTGACATTGG
GGACATTGCCGCCGCTTGGACGTTAGAAGTCCTGATCCCCCGCCTCTGCC
TCGCCATTCTTTTCCTCTCCGCCTCCCTCCTCAAACTCACCCTTCGGTAT
CCCATCCGGGTCTACGTGGGTTCGCACCCCATCATGCGCAACATTGTCCG
TCGTTGCCCTTCCTTCCAGAAGGACTATCGACCTCCCTCTTGGGCGTGTG
GGGCATGGGCGCAAGCGATTGTCTACCTGTATCGAAGCTGGCGCAACAAG
CACTTGCGAGGCTTTGCCCGTGAGGTGCTTCAGCTACCTGATGGCGAATC
TGTCTCCTTGTTTTACATGGCACCCCCGGGGCCGATGCGCGAGGCATTGA
TGCAGTGCAAGGAGGACAGGAGGGAGGAAGAGATGGGAGCAACTATCCAG
GCTCTTGCTACCAGTATGCCGCCTGATGACCCGCCTCCGCCCATCGTGGT
CATTTGCCATGGTGTCTTCCAAACAGCGGCAGATTTGTATGAATTTTGCA
CGTTTCTGACAGAGACGTGCGGATACATAGCATGTGTCTTCAACCGGAGG
GGAAACGACATGCCCTTGTCGAGAGCGCGGTTCAATACGGTCGGGGACCA
GTGCGATTTTCGATTTATTTTGTCTCGGATGAGGGACTTTTTCCCGAATA
ATTGTTTTTACGGCGTGGGGATTAGCGCGGGCTCGAGTTTGTTGGCCAGG
TATTTGGGGGATGCAGGGGAAGAGAGTGAGTTGGAGGGCGGGGTTCTGAT
CTCAGGGGGATATGATATGGAGCTGTCCTTGCAGCACATGACGCCATTGG
CGGATTTAGTGGTGACCACCCATGCCAAGAGCTTCTTCCTGGAGCGGAAC
GAGGAGACCTTGAAGAAAGAGGATGGGCCAGGCTTGCAGCGGTTGAAGAG
GAGCAGGTCCATGCAGGAGTTCCATGAGCACTTGCATATCTTTGACGGGA
AGGCCTCTAGAGAAGAGTATTTTCAAACCCATAACCCGGCGCTGGTCCTC
GGCAAGATTGCCCGACCCGTGGTGTACATTAATGCCTACGACGATATGTG
CTTCCCGGGTCATTTTACCTTCCAATTCAAGAAGCTGGTGGAGGAATGTC
AGCTGGCCACGGTACTGCATGTGGAGAAGGGGGGGCATGGGACGTTTTAT
GAGAATTGGGATGCCGGTTCCTCTCGGGCTTTTCAGTGCGTGAGGGAGTT
CGTGGATTGTCTGCAGAAGGGGTAA
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protein sequence of NO05G04690.1

>NO05G04690.1-protein ID=NO05G04690.1-protein|Name=NO05G04690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=425bp
MTVGMAIRGVSPLCDIGDIAAAWTLEVLIPRLCLAILFLSASLLKLTLRY
PIRVYVGSHPIMRNIVRRCPSFQKDYRPPSWACGAWAQAIVYLYRSWRNK
HLRGFAREVLQLPDGESVSLFYMAPPGPMREALMQCKEDRREEEMGATIQ
ALATSMPPDDPPPPIVVICHGVFQTAADLYEFCTFLTETCGYIACVFNRR
GNDMPLSRARFNTVGDQCDFRFILSRMRDFFPNNCFYGVGISAGSSLLAR
YLGDAGEESELEGGVLISGGYDMELSLQHMTPLADLVVTTHAKSFFLERN
EETLKKEDGPGLQRLKRSRSMQEFHEHLHIFDGKASREEYFQTHNPALVL
GKIARPVVYINAYDDMCFPGHFTFQFKKLVEECQLATVLHVEKGGHGTFY
ENWDAGSSRAFQCVREFVDCLQKG*
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mRNA from alignment at chr5:1217313..1218587+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G04690.1 ID=NO05G04690.1|Name=NO05G04690.1|organism=Nannochloropsis oceanica|type=mRNA|length=1275bp|location=Sequence derived from alignment at chr5:1217313..1218587+ (Nannochloropsis oceanica)
ATGACTGTGGGCATGGCCATCCGGGGCGTCAGCCCTCTATGTGACATTGG
GGACATTGCCGCCGCTTGGACGTTAGAAGTCCTGATCCCCCGCCTCTGCC
TCGCCATTCTTTTCCTCTCCGCCTCCCTCCTCAAACTCACCCTTCGGTAT
CCCATCCGGGTCTACGTGGGTTCGCACCCCATCATGCGCAACATTGTCCG
TCGTTGCCCTTCCTTCCAGAAGGACTATCGACCTCCCTCTTGGGCGTGTG
GGGCATGGGCGCAAGCGATTGTCTACCTGTATCGAAGCTGGCGCAACAAG
CACTTGCGAGGCTTTGCCCGTGAGGTGCTTCAGCTACCTGATGGCGAATC
TGTCTCCTTGTTTTACATGGCACCCCCGGGGCCGATGCGCGAGGCATTGA
TGCAGTGCAAGGAGGACAGGAGGGAGGAAGAGATGGGAGCAACTATCCAG
GCTCTTGCTACCAGTATGCCGCCTGATGACCCGCCTCCGCCCATCGTGGT
CATTTGCCATGGTGTCTTCCAAACAGCGGCAGATTTGTATGAATTTTGCA
CGTTTCTGACAGAGACGTGCGGATACATAGCATGTGTCTTCAACCGGAGG
GGAAACGACATGCCCTTGTCGAGAGCGCGGTTCAATACGGTCGGGGACCA
GTGCGATTTTCGATTTATTTTGTCTCGGATGAGGGACTTTTTCCCGAATA
ATTGTTTTTACGGCGTGGGGATTAGCGCGGGCTCGAGTTTGTTGGCCAGG
TATTTGGGGGATGCAGGGGAAGAGAGTGAGTTGGAGGGCGGGGTTCTGAT
CTCAGGGGGATATGATATGGAGCTGTCCTTGCAGCACATGACGCCATTGG
CGGATTTAGTGGTGACCACCCATGCCAAGAGCTTCTTCCTGGAGCGGAAC
GAGGAGACCTTGAAGAAAGAGGATGGGCCAGGCTTGCAGCGGTTGAAGAG
GAGCAGGTCCATGCAGGAGTTCCATGAGCACTTGCATATCTTTGACGGGA
AGGCCTCTAGAGAAGAGTATTTTCAAACCCATAACCCGGCGCTGGTCCTC
GGCAAGATTGCCCGACCCGTGGTGTACATTAATGCCTACGACGATATGTG
CTTCCCGGGTCATTTTACCTTCCAATTCAAGAAGCTGGTGGAGGAATGTC
AGCTGGCCACGGTACTGCATGTGGAGAAGGGGGGGCATGGGACGTTTTAT
GAGAATTGGGATGCCGGTTCCTCTCGGGCTTTTCAGTGCGTGAGGGAGTT
CGTGGATTGTCTGCAGAAGGGGTAA
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Coding sequence (CDS) from alignment at chr5:1217313..1218587+

>NO05G04690.1 ID=NO05G04690.1|Name=NO05G04690.1|organism=Nannochloropsis oceanica|type=CDS|length=1275bp|location=Sequence derived from alignment at chr5:1217313..1218587+ (Nannochloropsis oceanica)
ATGACTGTGGGCATGGCCATCCGGGGCGTCAGCCCTCTATGTGACATTGG
GGACATTGCCGCCGCTTGGACGTTAGAAGTCCTGATCCCCCGCCTCTGCC
TCGCCATTCTTTTCCTCTCCGCCTCCCTCCTCAAACTCACCCTTCGGTAT
CCCATCCGGGTCTACGTGGGTTCGCACCCCATCATGCGCAACATTGTCCG
TCGTTGCCCTTCCTTCCAGAAGGACTATCGACCTCCCTCTTGGGCGTGTG
GGGCATGGGCGCAAGCGATTGTCTACCTGTATCGAAGCTGGCGCAACAAG
CACTTGCGAGGCTTTGCCCGTGAGGTGCTTCAGCTACCTGATGGCGAATC
TGTCTCCTTGTTTTACATGGCACCCCCGGGGCCGATGCGCGAGGCATTGA
TGCAGTGCAAGGAGGACAGGAGGGAGGAAGAGATGGGAGCAACTATCCAG
GCTCTTGCTACCAGTATGCCGCCTGATGACCCGCCTCCGCCCATCGTGGT
CATTTGCCATGGTGTCTTCCAAACAGCGGCAGATTTGTATGAATTTTGCA
CGTTTCTGACAGAGACGTGCGGATACATAGCATGTGTCTTCAACCGGAGG
GGAAACGACATGCCCTTGTCGAGAGCGCGGTTCAATACGGTCGGGGACCA
GTGCGATTTTCGATTTATTTTGTCTCGGATGAGGGACTTTTTCCCGAATA
ATTGTTTTTACGGCGTGGGGATTAGCGCGGGCTCGAGTTTGTTGGCCAGG
TATTTGGGGGATGCAGGGGAAGAGAGTGAGTTGGAGGGCGGGGTTCTGAT
CTCAGGGGGATATGATATGGAGCTGTCCTTGCAGCACATGACGCCATTGG
CGGATTTAGTGGTGACCACCCATGCCAAGAGCTTCTTCCTGGAGCGGAAC
GAGGAGACCTTGAAGAAAGAGGATGGGCCAGGCTTGCAGCGGTTGAAGAG
GAGCAGGTCCATGCAGGAGTTCCATGAGCACTTGCATATCTTTGACGGGA
AGGCCTCTAGAGAAGAGTATTTTCAAACCCATAACCCGGCGCTGGTCCTC
GGCAAGATTGCCCGACCCGTGGTGTACATTAATGCCTACGACGATATGTG
CTTCCCGGGTCATTTTACCTTCCAATTCAAGAAGCTGGTGGAGGAATGTC
AGCTGGCCACGGTACTGCATGTGGAGAAGGGGGGGCATGGGACGTTTTAT
GAGAATTGGGATGCCGGTTCCTCTCGGGCTTTTCAGTGCGTGAGGGAGTT
CGTGGATTGTCTGCAGAAGGGGTAA
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Synonyms
Publications