NO05G03680.1, NO05G03680.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G03680.1
Unique NameNO05G03680.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5342
Alignment locationchr5:965880..971440 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:965880..971440 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO05G03680.1 vs.
Match: EWM27928.1 (mechanosensitive ion channel [Nannochloropsis gaditana])

HSP 1 Score: 242.7 bits (618), Expect = 1.700e-60
Identity = 150/295 (50.85%), Postives = 179/295 (60.68%), Query Frame = 0
Query:   42 TVSTQQNRPALHPVATHFKLTPATMLRCPRFIAVLALLVHLTTRTAASSKEAGAASPASTSPAAAASTTSTTTTTVKRGLRANLHLPHMHAPHLQIPKGGFVFSPFRHLGGAH--GNSVNAPP------PSHAAGASVHDFLRPQSGTRVKNVSVAGSVLSSP-------AERDASQGHSSHGEPHESKTTNDKHYPHQHMKSFFQSLRSWTSFKLYCCGVRDLIFIARPLETFLLRTGTIHDRDLSRFIARAIALVAFTMIITSILGTLGLDTKPIIAGLGVSGFIGTLRIVEL 322
            T +  + RP++     H  L    M + P     +ALLV   T+T  +++  GA++    SPA    +T++   T K G+ + LHLPHMHAPHL IPKGGF+FSPFRH GGAH  GN            PS  +G SV+   +  S  R    S AG  +S P       AER   QG        + +  N  HYPH HMKSFFQSLRSW SFK YCCGVRD + IARPLETFLLRTG +HDRDLSRFIARA A V  +MIITSILGTLGLDTKPIIAGLGVSGFI    + E+
Sbjct:    9 TQARYRRRPSIKYAGVHH-LHSLKMRQLPSSYFAVALLVAFATKTVVANRGPGASTNGLASPATQPVSTTSGACTRKYGMGSRLHLPHMHAPHLHIPKGGFLFSPFRHHGGAHAVGNLAKVTENSGGHTPSIFSGMSVYHMFKHHSADRRDQASAAGLAVSHPTGGSVATAERTLGQGDG------KQENQNSPHYPHLHMKSFFQSLRSWVSFKQYCCGVRDFLLIARPLETFLLRTGAVHDRDLSRFIARATAFVIISMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEI 296          
The following BLAST results are available for this feature:
BLAST of NO05G03680.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27928.11.700e-6050.85mechanosensitive ion channel [Nannochloropsis gadi... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03680NO05G03680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G03680.1NO05G03680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G03680.1.cds1NO05G03680.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G03680.1 ID=NO05G03680.1|Name=NO05G03680.1|organism=Nannochloropsis oceanica|type=mRNA|length=5342bp
AATACTTAATACCTCATCGGTTTTTCCTCCCTCTTCGGGATCCTCGCGTC
TCATTTTAGAGACATACACAGATGGGCCGGAACGTGAGTCACGCCCAGGT
CCGTGTGCTTCCTCCGTTGTTCTTTTCTCGTCCCTCTTCTTGTCTGCCTT
GTTTCGCTTGCGTGATTACACTGAAATGCTTAGGTCTTGGGCGGCATGTT
TTTTGAGGCTATGGTGCAGTCCGCTGGCACGCAGTCGGCTGTCTGCGACA
TGCCATCTCCTGAAGTAGATTCCAGGTCCCGTTGTTTCATCACGTCCGCT
CTACTTTCTCTTCCCACTACTGTAAGCACACAGCAAAACCGTCCTGCCTT
GCATCCCGTGGCGACCCACTTTAAACTCACGCCCGCCACAATGCTTCGAT
GCCCTCGTTTCATTGCCGTGCTGGCTCTCCTGGTCCACTTGACTACCAGG
ACAGCGGCCTCAAGCAAGGAAGCCGGAGCAGCGTCCCCGGCATCCACCAG
CCCCGCAGCAGCTGCCTCAACCACCTCAACGACCACCACCACCGTCAAGC
GGGGCCTTCGTGCCAATTTGCACCTTCCGCACATGCATGCACCACACTTG
CAGATCCCCAAGGGTGGTTTCGTTTTTAGCCCATTCCGCCATCTAGGTGG
CGCTCATGGCAACTCGGTCAACGCCCCGCCTCCCAGCCACGCTGCGGGTG
CCTCGGTCCACGACTTTTTGAGACCGCAATCTGGTACGAGGGTCAAGAAT
GTCAGTGTTGCTGGAAGTGTCCTTTCCTCGCCGGCGGAGAGGGATGCCAG
CCAGGGGCACAGCAGCCATGGTGAGCCGCATGAATCAAAAACCACCAACG
ACAAGCATTACCCACACCAACATATGAAAAGCTTCTTTCAATCGCTTCGA
AGCTGGACATCCTTCAAGCTTTACTGTTGTGGTGTGCGGGATCTGATTTT
TATCGCGCGGCCCCTTGAAACTTTTCTCTTGCGCACGGGCACGATTCACG
ATAGGGATTTGAGTCGCTTTATTGCTCGTGCCATTGCCTTGGTGGCTTTT
ACCATGATTATCACCTCTATTTTGGGCACGCTGGGTCTCGACACGAAGCC
CATCATTGCTGGTCTGGGAGTTTCGGGATTTATCGGTACGCTTCGCATTG
TTGAGTTAGGCCCATGGATTTTTAATATTTTCCCACAAGCTTAGTTTCTC
TTTTTTCTACCCTCCTACATCCGTCCTTTCTCTCACAAACAGTCGGTTTT
GCTCTCAAAGAGATTGCCACCAATGTCCTTTCTGGGATCCTGCTTGTCTT
CCAACGGCCCTTTCGCACAGGGTGGAAAATCAAGGTCGGTTCCTACCAAG
GCACTGTCCTGTCGGTCGACTCGCGCTATGTCCGTTTACTCACGGACGAG
GACGCGATGATTCTCGTGCCAGCGTATCAGGTCTACACGCAGGCAATCAC
TGTTTTGGAGCGAAAGGATAAGTCTGGGAGGGTCATCCACACATCGGGCA
CGACGGCCGGAGCGGCAGCGACGACGGCTGCGGCTGCCGGGAAGGTTGCC
AGCACGCCGCCATCGAGATAAATGGATACATAATGGGGGTTGAATGATCT
TCCTATAATCACACCGATGGCGCAGTCCCAATTCCTCCTCCTCCTTCTCC
TCCTCCTCCTTTACTATGACCAACACCGCTTACCCCGAAAAACACATCCC
GCCGTCGATGCAACTGTACGGGAATCTTTGCCCTTATCTCATGTAGTCTC
TTTAAATCAATCTCCGCCATCACCAGTGCCGGTGATGCGTCGCCCCCCGC
ATCTTCCATCACTTTCCCCCACGGGTCTACTATTAAAGAGTGCCCGTACG
ACGCCCGTTTTTCGTTGTGCTGTCCTGCTTGTGCGGACGCCAAGACGTAG
CATTGCGTTTCAATAGCTCTGGCCCGAAGTAAGATCTCCCAATGGGCTTG
TCCTGTCAAGACTGTAAATGCTGATGGGACAAGAAGGACCTCTGCGCCTC
TTTTGACCAATGCCTGGTACAATTCGGGAAAACGGAGGTCGTAGCAGGTG
GAGAGACCCAGTCGGCCGATGGGGGAATCAATGACTACCACCTCGGCGCC
GGGAGCAGTATATTTGCTTTCTTGCAACACTGGGCCATTTGGAAAGTTGA
CGTCAAACAGGTGGATTTTACGGTAGAGTGCTTTGATATCTCCTTTGTCG
TCGAGGACAATGTGGGTGTTATACACTCTCTCGTTCTCATCCCCGCTGTC
TTCTATTTTCGAATTCTGAGGTGATGGCATCTTCTCAGGAAACCCTCCGA
GAGAAAGCCACAGACCTTGCTCCTTGGCCAAAGTACGCATTTCACTCACC
ATGGGTCCTTCAATGGGCTGTCCCGCCGCGACAGTTTCTCGCCAGGAGGA
GCCTACAAGTGAGAAGCATTCCGGCAAGCAGAGCAAGGCGGCCCCCGCTT
TTTTTGCGCGAACAGCTAGGTCTCTACAGCGTCGGATGTTCTGGTCTCGG
TCTTCCGTGGAGGTGAGTTGCCCCACTGCGACGAGAGGGTTCATGGGCAG
GCGGCTGCTGCTGGCAGCGGTTGCGGCGGCGGCAGATGCAAGACTGGCAA
AGCGCATGTACGAGGCTAGAAAGATTGTATTCCTGGTGAAGGTTGGAGGA
AAAGGAAGAGGAGAATGTCAAAGAAGAGTGAGTACACGAGTAAAAAGAAT
CGGGGTTTCCCGATACAACATAATATTTTGCTTTATTCTTGTGTTTTGTA
CATTTCTTATTTGTCATATGACTCACACGTTTGCATCAAGTATTACAATT
TTCACATGCCTGCCCGAATGACCACATTTAAGGTAACAAAAGCCAACGCA
AAAACAACGATATGATTGCAAAATCTATCCCATTTATCGTAACACGGCCT
CGGCCACGCGGGCTATCCCAGCACCCTTCTCCTGCCCCTCCGAAAGGTAA
GCGTCGCGGGTATCAAAACAACATAGCTTGGTTCCGAATGATGTAGCCCA
TGCCATCTGTGGCCTCATGACTGGATTCGCTATTGCTGTTCCTTTCGCTG
CTGCTGCTGCCGGCGAGGGTGGTGCCACGGCAGGCGCAGGAGCAGGTAAA
ATTGAGGAGTAGGAGTCTTGTACCACCACCTGCGTGTCCTTCAAAAAGAG
TCGCTTCAGACAACTGACAATACGACGGATCTCATTCCATTGCTCTTGTC
CTTCCGCATAAATAACAGACTCCCAGCTAGTAAGAGAGGGCCCCGACGCT
TCGGAGAGTGAGAATGGGGTGCCTTCCTTCTTTATCGTGCTGGTGCTGCT
GGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGCACTAGAGCTTGGCAATG
CCCAAGACGCACGTTCTGCCAGTCTCCGCTGCGTCTGAGCTACCACATCC
AACATCAAAGTCTTGCTTAAAAGTGGCACCGGCGCTGATGCCGACAGCAT
CGCATCATCTTTCCCCTGTTGTGACTGCTGCCGCTGCTGCTGCTGCTGCT
GCTGCTGCTTCTCCGCTTTTATCACAGCCTGCACCTGCATTTGTACAATG
GCGACCGCAACCCCCACAAGTTCCTCCAATAAATACTCCTCTACCGCCCT
CGTCGCTAGATTGACATCCAACGCGCCAATCAACCTCTTGGAAGTCAGGA
AGATGTTGCCCACAGGCCGACTACCAGCGTGGATGAAGTGCGGCCCTCCT
GCCACCCCTCCCTCGCACATTTTACCCTTCCTTGTACTGACTTGCTTTCC
GTCGGTCTCGATTTTGTTTATGATGCGTTTGAGACGTCCTGCTCTGTCGT
TGTGGTTGGCACGTAATGCTTGTGTCCCACGGCTGCTGCTGCAGGCGTGT
TCGTAGTAGTAACTGTAAGGCCCACGATACCTCTGTCGGCGCAATCGTCG
TCGCCTCTGCTGCTGTTGCTGTTGCTGGCAATGCTGCTGCAAATGGCGGC
GAGGAGAAACATGAGTACCCTTGTACATGTCATCTTTTAAATCCTCCATA
ATCTCCTCGCCGTGCTCTCGATCCTCCTCCTCCTCCTCCTCCTCCTCTTT
TTGACTGGTCACCACCGCCGTTGTTTCTATGAGATGTAAAGCTAAATCCA
CAGCCACCGAGCCAAACCTCGATTCCCTTTCATTTACTGCCTTGACAAAC
ACACTCGCCAGAGCGTACACAACAGCAGGCCTCGGACTGTTATGTGAGCC
CGCAAACCGAATCCCCAACGACGGACCACCATACTTACTTCGCAGACCCT
CGGCGTGCCAGGGAGGAATTAACTCATCGTCTTCTGCTACTAGGAAAAGA
GCTGGGACAGTTGTGCAGTGGTGTACATGCTTAATAGGCTTGAGCTTAAA
TAAATCAAAGCCGGCACGAGAACGGACGGAGCGACGCAGGAGGGACAGGA
CGGCGGCGGTGGCGAAATGAGGGATGTGGACCATGCCCTTGCTGGTGAGA
TCGTAGGCAAGCTTTTTGAACCCTGAAAATGGCGAGTCGAGGACTAAGCC
CGCGGGAATCACCATAGATGAGGAAGAAGAATAGCAGGAGGCGGAAGAAA
AAGAGCAGGAGGAAGAGGAGGAGGAATGGGAAGGGGGGGAAGAAACAGTA
CATGCTTGAATGGTGTACTGTAAAGCCGTCACAGCGCCCATGGAACGCCC
ATGAAGGACTATGCGGCCACAGCCTCTTCGTCGGAGCTCGTCTATCACCT
GGCGTGTGTCGTGTACCTCGAACCAACCTAAGGAGATATATTCTCCGTCG
GCGTTGCCACACCCAGTAAAGTCAAAGCCAACGAGGGCTGAGCCGCTTGC
CATCACGGATTTCAACACATTTGTTTTCACCGCCTCCACGCGACTGCTCG
AATTTCCGTGCAAAAAAATGACGCAGGGCCATCCGTCCTGCGTCTCCGCC
CCTGCCGGTTGCCACAAACTACATCCCAATTTTTGATTTCGACCATTCTC
CACATCAAAGTCGGTTCTGTGACACACTGTGCCATCAGAGAAGGAGAGCG
TGACAGGTCCCAAGGCATGAGGGAATTCATAACCCAGCCGTGGAGGGCGG
ATGATTCCTAGCAAGAGCTGCTCGTACATGTCCGAAGCGTTGCGTGGCGG
CGCTCGCGGCTCGTGGATTTGCTGGGGATGTCGTTGGTGTTGGCATTGGG
CGCAGGAAGCCCGTCTACGATGGTCCCGGCAGTGAGTCTGGGGCGGGCCG
TCGAGCTGGGGAGAGCCCGTGGACGAGGTTCTTCTCGTCATTGTTGTTGG
TGTTGTTGCTCCGGTTGGGTTGACCGCCTGCTCATACCTCGGGGCCATAC
CAACATGAGGTTCTTGAGGACCCTTGAGAGTCATCTCACTGT
back to top

protein sequence of NO05G03680.1

>NO05G03680.1-protein ID=NO05G03680.1-protein|Name=NO05G03680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MFFEAMVQSAGTQSAVCDMPSPEVDSRSRCFITSALLSLPTTVSTQQNRP
ALHPVATHFKLTPATMLRCPRFIAVLALLVHLTTRTAASSKEAGAASPAS
TSPAAAASTTSTTTTTVKRGLRANLHLPHMHAPHLQIPKGGFVFSPFRHL
GGAHGNSVNAPPPSHAAGASVHDFLRPQSGTRVKNVSVAGSVLSSPAERD
ASQGHSSHGEPHESKTTNDKHYPHQHMKSFFQSLRSWTSFKLYCCGVRDL
IFIARPLETFLLRTGTIHDRDLSRFIARAIALVAFTMIITSILGTLGLDT
KPIIAGLGVSGFIGTLRIVELGPWIFNIFPQA*
back to top

mRNA from alignment at chr5:965880..971440-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G03680.1 ID=NO05G03680.1|Name=NO05G03680.1|organism=Nannochloropsis oceanica|type=mRNA|length=5561bp|location=Sequence derived from alignment at chr5:965880..971440- (Nannochloropsis oceanica)
AATACTTAATACCTCATCGGTTTTTCCTCCCTCTTCGGGATCCTCGCGTC TCATTTTAGAGACATACACAGATGGGCCGGAACGTGAGTCACGCCCAGGT CCGTGTGCTTCCTCCGTTGTTCTTTTCTCGTCCCTCTTCTTGTCTGCCTT GTTTCGCTTGCGTGATTACACTGAAATGCTTAGGTCTTGGGCGGCATGTT TTTTGAGGCTATGGTGCAGTCCGCTGGCACGCAGTCGGCTGTCTGCGACA TGCCATCTCCTGAAGTAGATTCCAGGTCCCGTTGTTTCATCACGTCCGCT CTACTTTCTCTTCCCACTACTGTAAGCACACAGCAAAACCGTCCTGCCTT GCATCCCGTGGCGACCCACTTTAAACTCACGCCCGCCACAATGCTTCGAT GCCCTCGTTTCATTGCCGTGCTGGCTCTCCTGGTCCACTTGACTACCAGG ACAGCGGCCTCAAGCAAGGAAGCCGGAGCAGCGTCCCCGGCATCCACCAG CCCCGCAGCAGCTGCCTCAACCACCTCAACGACCACCACCACCGTCAAGC GGGGCCTTCGTGCCAATTTGCACCTTCCGCACATGCATGCACCACACTTG CAGATCCCCAAGGGTGGTTTCGTTTTTAGCCCATTCCGCCATCTAGGTGG CGCTCATGGCAACTCGGTCAACGCCCCGCCTCCCAGCCACGCTGCGGGTG CCTCGGTCCACGACTTTTTGAGACCGCAATCTGGTACGAGGGTCAAGAAT GTCAGTGTTGCTGGAAGTGTCCTTTCCTCGCCGGCGGAGAGGGATGCCAG CCAGGGGCACAGCAGCCATGGTGAGCCGCATGAATCAAAAACCACCAACG ACAAGCATTACCCACACCAACATATGAAAAGCTTCTTTCAATCGCTTCGA AGCTGGACATCCTTCAAGCTTTACTGTTGTGGTGTGCGGGATCTGATTTT TATCGCGCGGCCCCTTGAAACTTTTCTCTTGCGCACGGGCACGATTCACG ATAGGGATTTGAGTCGCTTTATTGCTCGTGCCATTGCCTTGGTGGCTTTT ACCATGATTATCACCTCTATTTTGGGCACGCTGGGTCTCGACACGAAGCC CATCATTGCTGGTCTGGGAGTTTCGGGATTTATCGGTACGCTTCGCATTG TTGAGTTAGGCCCATGGATTTTTAATATTTTCCCACAAGCTTAGTTTCTC TTTTTTCTACCCTCCTACATCCGTCCTTTCTCTCACAAACAGTCGGTTTT GCTCTCAAAGAGATTGCCACCAATGTCCTTTCTGGGATCCTGCTTGTCTT CCAACGGCCCTTTCGCACAGGGTGGAAAATCAAGGTCGGTTCCTACCAAG GCACTGTCCTGTCGGTCGACTCGCGCTATGTCCGTTTACTCACGGACGAG GACGCGATGATTCTCGTGCCAGCGTATCAGGTCTACACGCAGGCAATCAC TGTTTTGGAGCGAAAGGATAAGTCTGGGAGGGTCATCCACACATCGGGCA CGACGGCCGGAGCGGCAGCGACGACGGCTGCGGCTGCCGGGAAGGTTGCC AGCACGCCGCCATCGAGATAAATGGATACATAATGGGGGTTGAATGGTAC GTGAAGCAAAGCGGAAGAGGATTGATCGTGGTTTAGTGAATGCGTAAGGG CAGAGTTTTGATAATGAGAAAGAGGAAGAGACATGTTTTGACGAGTGTAG ATAAGTAAAAGGTCAGCATTTTTACAGGGAACTAAAAACAACAAATGAAC TGAAAGATAATTACACATCATTTATTCTTACTCACAACGAACATCGTCGC GTCGTTTCTATACAGATCTTCCTATAATCACACCGATGGCGCAGTCCCAA TTCCTCCTCCTCCTTCTCCTCCTCCTCCTTTACTATGACCAACACCGCTT ACCCCGAAAAACACATCCCGCCGTCGATGCAACTGTACGGGAATCTTTGC CCTTATCTCATGTAGTCTCTTTAAATCAATCTCCGCCATCACCAGTGCCG GTGATGCGTCGCCCCCCGCATCTTCCATCACTTTCCCCCACGGGTCTACT ATTAAAGAGTGCCCGTACGACGCCCGTTTTTCGTTGTGCTGTCCTGCTTG TGCGGACGCCAAGACGTAGCATTGCGTTTCAATAGCTCTGGCCCGAAGTA AGATCTCCCAATGGGCTTGTCCTGTCAAGACTGTAAATGCTGATGGGACA AGAAGGACCTCTGCGCCTCTTTTGACCAATGCCTGGTACAATTCGGGAAA ACGGAGGTCGTAGCAGGTGGAGAGACCCAGTCGGCCGATGGGGGAATCAA TGACTACCACCTCGGCGCCGGGAGCAGTATATTTGCTTTCTTGCAACACT GGGCCATTTGGAAAGTTGACGTCAAACAGGTGGATTTTACGGTAGAGTGC TTTGATATCTCCTTTGTCGTCGAGGACAATGTGGGTGTTATACACTCTCT CGTTCTCATCCCCGCTGTCTTCTATTTTCGAATTCTGAGGTGATGGCATC TTCTCAGGAAACCCTCCGAGAGAAAGCCACAGACCTTGCTCCTTGGCCAA AGTACGCATTTCACTCACCATGGGTCCTTCAATGGGCTGTCCCGCCGCGA CAGTTTCTCGCCAGGAGGAGCCTACAAGTGAGAAGCATTCCGGCAAGCAG AGCAAGGCGGCCCCCGCTTTTTTTGCGCGAACAGCTAGGTCTCTACAGCG TCGGATGTTCTGGTCTCGGTCTTCCGTGGAGGTGAGTTGCCCCACTGCGA CGAGAGGGTTCATGGGCAGGCGGCTGCTGCTGGCAGCGGTTGCGGCGGCG GCAGATGCAAGACTGGCAAAGCGCATGTACGAGGCTAGAAAGATTGTATT CCTGGTGAAGGTTGGAGGAAAAGGAAGAGGAGAATGTCAAAGAAGAGTGA GTACACGAGTAAAAAGAATCGGGGTTTCCCGATACAACATAATATTTTGC TTTATTCTTGTGTTTTGTACATTTCTTATTTGTCATATGACTCACACGTT TGCATCAAGTATTACAATTTTCACATGCCTGCCCGAATGACCACATTTAA GGTAACAAAAGCCAACGCAAAAACAACGATATGATTGCAAAATCTATCCC ATTTATCGTAACACGGCCTCGGCCACGCGGGCTATCCCAGCACCCTTCTC CTGCCCCTCCGAAAGGTAAGCGTCGCGGGTATCAAAACAACATAGCTTGG TTCCGAATGATGTAGCCCATGCCATCTGTGGCCTCATGACTGGATTCGCT ATTGCTGTTCCTTTCGCTGCTGCTGCTGCCGGCGAGGGTGGTGCCACGGC AGGCGCAGGAGCAGGTAAAATTGAGGAGTAGGAGTCTTGTACCACCACCT GCGTGTCCTTCAAAAAGAGTCGCTTCAGACAACTGACAATACGACGGATC TCATTCCATTGCTCTTGTCCTTCCGCATAAATAACAGACTCCCAGCTAGT AAGAGAGGGCCCCGACGCTTCGGAGAGTGAGAATGGGGTGCCTTCCTTCT TTATCGTGCTGGTGCTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTG GCACTAGAGCTTGGCAATGCCCAAGACGCACGTTCTGCCAGTCTCCGCTG CGTCTGAGCTACCACATCCAACATCAAAGTCTTGCTTAAAAGTGGCACCG GCGCTGATGCCGACAGCATCGCATCATCTTTCCCCTGTTGTGACTGCTGC CGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTCCGCTTTTATCACAGCCTG CACCTGCATTTGTACAATGGCGACCGCAACCCCCACAAGTTCCTCCAATA AATACTCCTCTACCGCCCTCGTCGCTAGATTGACATCCAACGCGCCAATC AACCTCTTGGAAGTCAGGAAGATGTTGCCCACAGGCCGACTACCAGCGTG GATGAAGTGCGGCCCTCCTGCCACCCCTCCCTCGCACATTTTACCCTTCC TTGTACTGACTTGCTTTCCGTCGGTCTCGATTTTGTTTATGATGCGTTTG AGACGTCCTGCTCTGTCGTTGTGGTTGGCACGTAATGCTTGTGTCCCACG GCTGCTGCTGCAGGCGTGTTCGTAGTAGTAACTGTAAGGCCCACGATACC TCTGTCGGCGCAATCGTCGTCGCCTCTGCTGCTGTTGCTGTTGCTGGCAA TGCTGCTGCAAATGGCGGCGAGGAGAAACATGAGTACCCTTGTACATGTC ATCTTTTAAATCCTCCATAATCTCCTCGCCGTGCTCTCGATCCTCCTCCT CCTCCTCCTCCTCCTCTTTTTGACTGGTCACCACCGCCGTTGTTTCTATG AGATGTAAAGCTAAATCCACAGCCACCGAGCCAAACCTCGATTCCCTTTC ATTTACTGCCTTGACAAACACACTCGCCAGAGCGTACACAACAGCAGGCC TCGGACTGTTATGTGAGCCCGCAAACCGAATCCCCAACGACGGACCACCA TACTTACTTCGCAGACCCTCGGCGTGCCAGGGAGGAATTAACTCATCGTC TTCTGCTACTAGGAAAAGAGCTGGGACAGTTGTGCAGTGGTGTACATGCT TAATAGGCTTGAGCTTAAATAAATCAAAGCCGGCACGAGAACGGACGGAG CGACGCAGGAGGGACAGGACGGCGGCGGTGGCGAAATGAGGGATGTGGAC CATGCCCTTGCTGGTGAGATCGTAGGCAAGCTTTTTGAACCCTGAAAATG GCGAGTCGAGGACTAAGCCCGCGGGAATCACCATAGATGAGGAAGAAGAA TAGCAGGAGGCGGAAGAAAAAGAGCAGGAGGAAGAGGAGGAGGAATGGGA AGGGGGGGAAGAAACAGTACATGCTTGAATGGTGTACTGTAAAGCCGTCA CAGCGCCCATGGAACGCCCATGAAGGACTATGCGGCCACAGCCTCTTCGT CGGAGCTCGTCTATCACCTGGCGTGTGTCGTGTACCTCGAACCAACCTAA GGAGATATATTCTCCGTCGGCGTTGCCACACCCAGTAAAGTCAAAGCCAA CGAGGGCTGAGCCGCTTGCCATCACGGATTTCAACACATTTGTTTTCACC GCCTCCACGCGACTGCTCGAATTTCCGTGCAAAAAAATGACGCAGGGCCA TCCGTCCTGCGTCTCCGCCCCTGCCGGTTGCCACAAACTACATCCCAATT TTTGATTTCGACCATTCTCCACATCAAAGTCGGTTCTGTGACACACTGTG CCATCAGAGAAGGAGAGCGTGACAGGTCCCAAGGCATGAGGGAATTCATA ACCCAGCCGTGGAGGGCGGATGATTCCTAGCAAGAGCTGCTCGTACATGT CCGAAGCGTTGCGTGGCGGCGCTCGCGGCTCGTGGATTTGCTGGGGATGT CGTTGGTGTTGGCATTGGGCGCAGGAAGCCCGTCTACGATGGTCCCGGCA GTGAGTCTGGGGCGGGCCGTCGAGCTGGGGAGAGCCCGTGGACGAGGTTC TTCTCGTCATTGTTGTTGGTGTTGTTGCTCCGGTTGGGTTGACCGCCTGC TCATACCTCGGGGCCATACCAACATGAGGTTCTTGAGGACCCTTGAGAGT CATCTCACTGT
back to top

Coding sequence (CDS) from alignment at chr5:965880..971440-

>NO05G03680.1 ID=NO05G03680.1|Name=NO05G03680.1|organism=Nannochloropsis oceanica|type=CDS|length=999bp|location=Sequence derived from alignment at chr5:965880..971440- (Nannochloropsis oceanica)
ATGTTTTTTGAGGCTATGGTGCAGTCCGCTGGCACGCAGTCGGCTGTCTG
CGACATGCCATCTCCTGAAGTAGATTCCAGGTCCCGTTGTTTCATCACGT
CCGCTCTACTTTCTCTTCCCACTACTGTAAGCACACAGCAAAACCGTCCT
GCCTTGCATCCCGTGGCGACCCACTTTAAACTCACGCCCGCCACAATGCT
TCGATGCCCTCGTTTCATTGCCGTGCTGGCTCTCCTGGTCCACTTGACTA
CCAGGACAGCGGCCTCAAGCAAGGAAGCCGGAGCAGCGTCCCCGGCATCC
ACCAGCCCCGCAGCAGCTGCCTCAACCACCTCAACGACCACCACCACCGT
CAAGCGGGGCCTTCGTGCCAATTTGCACCTTCCGCACATGCATGCACCAC
ACTTGCAGATCCCCAAGGGTGGTTTCGTTTTTAGCCCATTCCGCCATCTA
GGTGGCGCTCATGGCAACTCGGTCAACGCCCCGCCTCCCAGCCACGCTGC
GGGTGCCTCGGTCCACGACTTTTTGAGACCGCAATCTGGTACGAGGGTCA
AGAATGTCAGTGTTGCTGGAAGTGTCCTTTCCTCGCCGGCGGAGAGGGAT
GCCAGCCAGGGGCACAGCAGCCATGGTGAGCCGCATGAATCAAAAACCAC
CAACGACAAGCATTACCCACACCAACATATGAAAAGCTTCTTTCAATCGC
TTCGAAGCTGGACATCCTTCAAGCTTTACTGTTGTGGTGTGCGGGATCTG
ATTTTTATCGCGCGGCCCCTTGAAACTTTTCTCTTGCGCACGGGCACGAT
TCACGATAGGGATTTGAGTCGCTTTATTGCTCGTGCCATTGCCTTGGTGG
CTTTTACCATGATTATCACCTCTATTTTGGGCACGCTGGGTCTCGACACG
AAGCCCATCATTGCTGGTCTGGGAGTTTCGGGATTTATCGGTACGCTTCG
CATTGTTGAGTTAGGCCCATGGATTTTTAATATTTTCCCACAAGCTTAG
back to top
Synonyms
Publications