NO05G03310.1, NO05G03310.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G03310.1
Unique Name	NO05G03310.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4614
Alignment location	chr5:861782..866395 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:861782..866395 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO05G03310.1 vs.
Match: EWM28054.1 (transcription initiation factor tfiid subunit [Nannochloropsis gaditana])

HSP 1 Score: 1225.3 bits (3169), Expect = 0.000e+0
Identity = 661/1090 (60.64%), Postives = 796/1090 (73.03%), Query Frame = 0

Query:  446 GLPEASMAFHGLSLHRVEDVHPPRVFDHSMTFHLALAEGLFASWLLPRVRPRFTRDRWIYHGVLGYLVLMYVRRRYGEHEYRYRLLRLMDAVTALERSGQSTPLLPPDSVLLASEIYSPASLELVRVKPPVIMHMIEQRVGRKSLRDVLRSVACPTPVVSAIPAAASGGGGGGGGGGGGGGGGGGGGEKGERGGANAMDVND---NARLIAPANGTS--TAGHVHPQALKTLGFLRLCLKTSSRGDFLKNLRECWLEGRGPAYFTVSYTYDRRAAKTELTLTIRQVVPPWGRLFVGTLRIRIMEDAGPYDYDREINEAEHVFTFKLHSKVRKTGGGRRKKLQVVEG-AVGGATPVGGPNLTKAAKFQAEVAAASAAAAEGGKEESCGTAKGSEGEKPKKRRKKAELAAEAAAALSAPYGEGHGGGEAPAIGGVPMATPAVGASVTSIGMNIRRDEDEYAASRREHYSPVVWVRLDPDLQWITEWEWENFPEYLFLEQLHRDTDAAAQCLALRALSAYPKSGQDAAVAVGAGGMGAVTRPSMAALAMSDCLRGKVRPGWVEPSLSVRMEAARALAAWQNNHAPGSMVAQETGWRGLELLLQDYRERFFDASGRIPLPADFTDEAEYQIQKSLIYAVSLIRAKDGCTPSSIWDFLRTILEAHDNSHNPFDDSAFLRTVLMGVANLHIGPSQDRAGAGLASDLFPLVHRFLSWHQEVGSYDHIVEAAALRAMCNLELIRGGIPGQSVDYLQYAKPVPDRVLGKAALMNPSSVVSLRLAALEAVARLRVREVKVPGAPTTAAAAKAGEGLEGPIRALQWVLSVVQHEKATGSNIFRYKALQIMFETLRHPLDYRPSLVTIHQPIALAPTHFLDHLTHEGPAYDKLDAGILNLTHPPCSSRENPFLNSLRSVACAEASAGVRRQLWRFITRETWYNQPLRGMAMSLHQAIWGWCPFPLGGGVREGEGEEMLTTS---ISSKKDFAGLENVYLELLSQRADGIFSLRSTLFDERDWRVWRNRRARRLDMLQGQQGAGGRREN--GTKTLSWDDLSEDERGERKECLESREAITKSNSKVRLK--LSIAPSSSSSVI 1523
            GLP+ ++AFHGLSLHR  D+HP RVFD SM  HL +AE  FASWLLPR+RPRF+RDRWI+HGVLGYL+L+YVRRR GEHEYR RLLRLMDAV ALER GQS PLLPPDS+LLA E+YSPA+LELVRVKPP+IMHMIEQRVGRK LRDVLRSVACPT      PAAAS  G    G               ++  A A D++D   +A     A G +  +AG V PQALKTLGFLRLCLKTSSRGDF+KNLRECWLEGRGPAYF+V + +DRRA K ELT+T+RQ VPPWGRLF G LRIRIMED GPYDYDR+I+EAEHVF+FKLHSKVRK GG R++K Q+    +     P  G    KAAK  A   A + +  +GG          ++  KPKKRRKKA  AAEA+   S    +   GG          ATP+V  ++T      R+++D+Y  SRREHY PVVW+RLDPDLQWI EWEWEN PEY+FLEQLHRD DAAAQCLALRAL++YPK+ QD    VG+   G   RPS+AA AMSDC+RGK  PGWVEPSL+VRMEAARALAAWQ+NHAPGSM+  ++GWRGL+ L   YRER+FDA+ R+PLPADFTDEAEYQ+QK+L+YA+SL+R KD  +P  +W+FLR++LE HDNS NPFDDSAFLRTVL  VANL +  S++R+G  L  +L P V R L WHQEVGSYDH VEAAALRA+ NLEL+RGG   ++V++LQY K +PD+VL K AL +PSS+V LRLAALEAV RL+++E K     ++AA A A  G+EGP +AL WVL++++HEKA GS IF YKALQ++FE LRHPLDYR   +  + P+ALAPTHFLDHL   G AYD+LDA +   ++    S+ENP+L+SLRS         VR+++W FIT E+WY+QPLRGMA+ L QAIWG+ P       +  + E+ L T+    S  K+F GLE+VY+ELL  RADG+FSLRSTLFD+ DWRVWR+RRARRL      Q  GGR+EN  G K+LS +DLS+ ER ERK CLESR+AI KSNSKVRLK  L    S SS  I
Sbjct:  131 GLPDTAIAFHGLSLHRAGDLHPCRVFDSSMALHLGMAEAFFASWLLPRLRPRFSRDRWIFHGVLGYLLLLYVRRRLGEHEYRCRLLRLMDAVIALEREGQSMPLLPPDSLLLAREMYSPANLELVRVKPPIIMHMIEQRVGRKPLRDVLRSVACPT------PAAASSTGEPSDG--------------IDQDAAAARDMDDPDPSASSPKHAAGVTPVSAGTVRPQALKTLGFLRLCLKTSSRGDFIKNLRECWLEGRGPAYFSVFHAFDRRAPKPELTITLRQTVPPWGRLFTGPLRIRIMEDGGPYDYDRDISEAEHVFSFKLHSKVRKVGGSRQRKQQISANLSEKDPGPEAGSKAKKAAKAGAHDDADTPSGIDGGD-------PATDAPKPKKRRKKANAAAEAS---SVEQEQALAGGS---------ATPSVSETLTGGVRGSRQEDDDYTLSRREHYCPVVWLRLDPDLQWIAEWEWENLPEYIFLEQLHRDPDAAAQCLALRALTSYPKATQDTTALVGSVQSGTTLRPSLAAQAMSDCVRGKQGPGWVEPSLNVRMEAARALAAWQSNHAPGSMITADSGWRGLDFLFCAYRERYFDATSRVPLPADFTDEAEYQLQKALLYAISLVRGKDRYSPRMVWEFLRSVLEGHDNSRNPFDDSAFLRTVLSAVANLRVNSSEERSGTSLVENLHPQVMRHLIWHQEVGSYDHAVEAAALRALWNLELVRGGSQAKAVEFLQYVKSIPDQVLSKKALSDPSSLVPLRLAALEAVVRLQIQEAKHFDTDSSAAEA-ARAGIEGPRKALHWVLTILKHEKACGSIIFCYKALQVLFEALRHPLDYRSDALNFNAPLALAPTHFLDHLATNGQAYDELDAAV--ASNASLKSKENPYLSSLRSAEFVGPHEDVRKEMWHFITTESWYSQPLRGMALWLFQAIWGYRPLEES---KLHDKEDPLGTNEAGSSELKEFIGLEDVYMELLGLRADGVFSLRSTLFDDHDWRVWRDRRARRL----SAQPGGGRKENVAGNKSLSLEDLSDTERSERKMCLESRKAIMKSNSKVRLKPVLHFGLSESSDQI 1171

The following BLAST results are available for this feature:

BLAST of NO05G03310.1 vs.

BLAST of NO05G03310.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28054.1	0.000e+0	60.64	transcription initiation factor tfiid subunit [Nan...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G03310	NO05G03310	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G03310.1	NO05G03310.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G03310.1.cds1	NO05G03310.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:861782..866395-
coding sequence from alignment at chr5:861782..866395-

mRNA sequence

>NO05G03310.1 ID=NO05G03310.1|Name=NO05G03310.1|organism=Nannochloropsis oceanica|type=mRNA|length=4614bp
ATGGCGACGGTGGGTGCAGCAGCCACGGCGGCATCCCGGGCCGAGGTTTT
GCATGAGAGCCTAGACCTGCGCGTGGACTTGGAGAAGCGTGAAGTTAAGG
GTCATGCCACCGTCTGGGTGCTGTTGCCGCCCTTACCTGCGGGAGATTTG
GGGACGGTTGACGAGGGCGTTATGGAATACCGGCTGCATGCCCGACAGAT
GGAAATCCACGAGGTCAAAGTGAATGACATGCCGGCCTCCTACATGTACC
CGCACCCCGTCGACCTCCTTCGTGATTTTGTTCCACCCGGGAGCGAAGAC
ATTGATGACAGGGAGAAGAGTGGCTCGTCTGCGCGAATGGACGGGGAGGC
CTTGGACCTTCACTACCGATGTCAACTCATTGCTTCGCAGGAGGGTGAGC
TTAGCCTACAACTGCCCAAGCGACAATCATGGAGGCCACCGCCGTCCGAC
GTCCAAGAGGAAGGCGACGAAACTGTCAAAAATATTCCACAAGTGGTCCT
GAATGCCGGCATAGCTGCCCTCCGGATTTGCAAGATCGAGATTGATTACA
GGTTGCAGAATCCTGTGGCTGGCCTGCGTTTTGATAGTCATCCTGCCCAT
GCCTATAGCATGCGTTGTCCCAGCGTCCTGCACGATTTTGATGGGCCCCG
ATGTTGGTTCCCTTGCGCCGACCGCACTACGGACATTTTTACTCTGGACA
TGGTGGTAGCGGTTGTTTCTCCAGCGTCGTCGAATAGAGGGGAGGTTGGG
AATGGGGACACCGAGGCTAATGACCGAGAGGGCAATCATGTAGGAAAGGT
TGACATTGTGAACGACAGTGGTACCAACAGTAGTAGTAGAGCAAGCACCA
CAATTAGCAACAGCAGCACAGCCATCAACAGAGATGAGGAGCATCCAGTA
GTAGTGCTGGTTGGAGGTGGGCAGCTTTTGGGGAAGGAGAGAAAGGTGGC
GGACGGGACTGTAGTGTGGCGTTATGCAATAGAAACACCCATTACGGCAT
CAGCTGTCTCGCTGGTTGTGGGTCACTTTGGGAAGTATGTGGATCCGGGC
GTGCCTCGATTGACTCACCATTATCTGCTGCGGGAGGAGCGACGAGCAGC
AACCTTCAAAGCTTCCAATGGAAGAAATAGCCTTCCAACAATAGAGAAGC
CATTGCCACCACCACCGCCACCACGATCGTGGGTAAGTCACAGCGTGGAG
GGCATGGGTCCGGCTATGAGCTTTCTGGCGGATTTCTTTCACCTCGCTCC
AGGCGGCGGAGAAGCAGCAACAGGCAGTGCCCCTACCCCTTCTGTCGTAG
TTCCTTACCTCGAGCACCGAATTGTGTTCGTCAAGGGCCTACCTGAGGCC
AGTATGGCTTTCCACGGCCTCTCCTTGCATAGGGTAGAGGACGTGCACCC
TCCTCGTGTGTTCGACCACTCCATGACCTTTCACCTCGCTCTCGCCGAGG
GCCTCTTCGCGTCTTGGCTTCTCCCTCGAGTTCGTCCCCGCTTCACCCGC
GACCGTTGGATCTATCACGGCGTGTTAGGATATCTCGTCCTAATGTACGT
ACGGCGGCGATACGGCGAGCATGAATACCGATATCGTCTGCTGAGATTGA
TGGATGCAGTCACAGCTTTGGAACGCTCGGGGCAAAGCACGCCATTACTG
CCTCCAGACTCAGTCCTTTTGGCGAGTGAGATATACAGTCCTGCTAGCTT
GGAATTGGTGCGAGTCAAGCCTCCAGTGATTATGCATATGATTGAACAGC
GTGTCGGCCGCAAATCTTTGCGAGATGTCCTGCGCTCCGTGGCGTGCCCC
ACGCCCGTCGTGTCGGCAATACCAGCAGCAGCAAGTGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAA
AAGGAGAAAGAGGAGGTGCCAATGCCATGGACGTCAATGATAATGCCCGA
CTCATCGCACCCGCGAACGGCACTTCCACCGCGGGTCATGTCCATCCCCA
GGCATTAAAAACTCTGGGTTTCCTCCGCCTGTGCCTCAAGACGAGCAGTC
GGGGGGACTTTCTCAAGAACCTCCGTGAATGTTGGTTGGAAGGCCGAGGA
CCGGCATATTTCACCGTTTCTTATACCTATGATCGCCGTGCGGCCAAGAC
TGAATTGACGTTAACCATTCGTCAGGTCGTTCCTCCGTGGGGCCGTTTGT
TTGTGGGCACGTTACGGATTCGGATCATGGAGGACGCAGGTCCCTACGAT
TACGATCGAGAGATCAACGAGGCTGAGCATGTATTTACGTTCAAGCTGCA
TTCTAAGGTGCGCAAGACGGGCGGCGGGCGTCGGAAGAAGCTGCAGGTGG
TGGAGGGGGCGGTTGGCGGTGCTACGCCTGTAGGGGGGCCAAATCTGACC
AAGGCGGCGAAGTTTCAGGCAGAGGTAGCAGCAGCATCAGCAGCAGCAGC
AGAAGGAGGAAAGGAGGAAAGTTGTGGCACTGCTAAAGGCAGTGAGGGAG
AGAAGCCGAAAAAGCGTCGCAAGAAGGCCGAACTGGCTGCGGAAGCTGCC
GCTGCACTCAGTGCACCTTACGGTGAAGGACACGGAGGAGGTGAGGCACC
AGCAATAGGAGGAGTGCCTATGGCAACTCCAGCCGTAGGAGCGAGTGTCA
CAAGCATTGGTATGAACATCCGCCGAGACGAGGATGAGTACGCGGCATCG
CGACGCGAGCACTACAGTCCGGTTGTGTGGGTGCGGCTCGATCCGGACTT
GCAGTGGATTACAGAATGGGAATGGGAGAATTTTCCCGAGTATCTCTTTC
TCGAACAGCTCCACCGCGATACCGACGCCGCTGCTCAATGCCTTGCCTTA
CGCGCTCTTAGTGCTTATCCCAAGTCTGGTCAAGATGCAGCGGTTGCAGT
AGGTGCTGGAGGGATGGGGGCGGTGACGCGACCCTCCATGGCAGCTTTGG
CCATGAGTGATTGTCTGAGAGGCAAGGTCCGTCCTGGTTGGGTCGAGCCG
TCGTTGAGCGTGCGGATGGAAGCAGCTCGGGCCTTGGCAGCATGGCAGAA
CAACCATGCACCCGGGTCTATGGTTGCTCAGGAGACGGGTTGGAGGGGTC
TGGAACTCCTCCTTCAAGATTACCGGGAGCGTTTTTTTGATGCCAGTGGT
CGCATACCGTTACCCGCAGATTTCACAGACGAAGCAGAATATCAGATCCA
AAAAAGTTTGATTTACGCCGTCTCTCTCATCCGAGCCAAGGACGGGTGCA
CTCCTTCATCAATCTGGGACTTTCTTCGAACCATTCTTGAGGCACACGAC
AACTCTCACAACCCCTTTGATGACTCCGCCTTTCTCCGCACGGTCCTCAT
GGGTGTCGCCAATCTTCACATTGGCCCTTCCCAAGATCGAGCCGGCGCTG
GCCTCGCCTCTGACCTATTTCCCCTGGTCCATCGATTTTTAAGCTGGCAC
CAAGAAGTCGGCTCGTATGACCATATTGTGGAAGCAGCTGCTCTTCGCGC
CATGTGCAACCTGGAGCTCATCCGTGGAGGGATCCCTGGACAGAGTGTCG
ATTATCTGCAGTACGCCAAGCCCGTGCCTGATCGAGTGCTGGGAAAAGCA
GCACTAATGAACCCTTCCTCCGTCGTGTCCTTGCGTTTGGCGGCCTTGGA
AGCAGTGGCGCGGCTGCGTGTGCGTGAAGTGAAGGTGCCTGGTGCACCGA
CCACGGCGGCAGCGGCAAAGGCGGGAGAAGGGTTGGAGGGACCAATACGG
GCGTTGCAGTGGGTGTTGAGTGTAGTACAGCATGAGAAGGCGACGGGGTC
TAACATTTTCCGGTATAAAGCCCTGCAAATTATGTTTGAAACTTTACGGC
ATCCATTGGATTATCGTCCTTCCTTAGTGACGATCCACCAGCCAATCGCC
TTGGCTCCGACGCATTTCCTCGACCATTTAACGCACGAAGGCCCCGCCTA
CGACAAACTCGATGCAGGCATATTGAATCTCACCCATCCCCCCTGTAGCA
GTCGTGAGAATCCTTTCCTGAATTCGTTGCGTTCAGTGGCATGTGCCGAG
GCGAGTGCGGGCGTCCGGCGGCAATTGTGGCGATTTATCACGCGGGAGAC
ATGGTACAATCAGCCGCTAAGGGGGATGGCGATGTCCTTGCATCAAGCTA
TTTGGGGTTGGTGTCCCTTTCCACTCGGAGGGGGAGTAAGGGAAGGGGAG
GGGGAAGAGATGCTAACGACCAGCATCAGTAGCAAAAAGGATTTTGCGGG
GTTGGAAAATGTGTATCTGGAACTCTTGAGTCAGCGGGCGGATGGGATAT
TTTCCTTACGATCCACTCTATTTGATGAGCGGGACTGGCGGGTGTGGCGA
AACCGACGGGCGCGGCGACTGGACATGTTGCAGGGGCAGCAAGGCGCGGG
GGGTAGGAGGGAGAACGGCACCAAGACTTTGTCCTGGGACGATTTGTCGG
AGGACGAACGCGGCGAGCGTAAGGAGTGTCTGGAGTCCCGAGAGGCTATC
ACCAAGAGTAACTCCAAGGTGCGTCTAAAGCTCTCTATCGCGCCGTCATC
TTCGTCTTCTGTGATAGCACCTTCGGGAGGCGCCGGAGGTGACGGCATGT
ACTTGGATGGATGA

protein sequence of NO05G03310.1

>NO05G03310.1-protein ID=NO05G03310.1-protein|Name=NO05G03310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1538bp
MATVGAAATAASRAEVLHESLDLRVDLEKREVKGHATVWVLLPPLPAGDL
GTVDEGVMEYRLHARQMEIHEVKVNDMPASYMYPHPVDLLRDFVPPGSED
IDDREKSGSSARMDGEALDLHYRCQLIASQEGELSLQLPKRQSWRPPPSD
VQEEGDETVKNIPQVVLNAGIAALRICKIEIDYRLQNPVAGLRFDSHPAH
AYSMRCPSVLHDFDGPRCWFPCADRTTDIFTLDMVVAVVSPASSNRGEVG
NGDTEANDREGNHVGKVDIVNDSGTNSSSRASTTISNSSTAINRDEEHPV
VVLVGGGQLLGKERKVADGTVVWRYAIETPITASAVSLVVGHFGKYVDPG
VPRLTHHYLLREERRAATFKASNGRNSLPTIEKPLPPPPPPRSWVSHSVE
GMGPAMSFLADFFHLAPGGGEAATGSAPTPSVVVPYLEHRIVFVKGLPEA
SMAFHGLSLHRVEDVHPPRVFDHSMTFHLALAEGLFASWLLPRVRPRFTR
DRWIYHGVLGYLVLMYVRRRYGEHEYRYRLLRLMDAVTALERSGQSTPLL
PPDSVLLASEIYSPASLELVRVKPPVIMHMIEQRVGRKSLRDVLRSVACP
TPVVSAIPAAASGGGGGGGGGGGGGGGGGGGGEKGERGGANAMDVNDNAR
LIAPANGTSTAGHVHPQALKTLGFLRLCLKTSSRGDFLKNLRECWLEGRG
PAYFTVSYTYDRRAAKTELTLTIRQVVPPWGRLFVGTLRIRIMEDAGPYD
YDREINEAEHVFTFKLHSKVRKTGGGRRKKLQVVEGAVGGATPVGGPNLT
KAAKFQAEVAAASAAAAEGGKEESCGTAKGSEGEKPKKRRKKAELAAEAA
AALSAPYGEGHGGGEAPAIGGVPMATPAVGASVTSIGMNIRRDEDEYAAS
RREHYSPVVWVRLDPDLQWITEWEWENFPEYLFLEQLHRDTDAAAQCLAL
RALSAYPKSGQDAAVAVGAGGMGAVTRPSMAALAMSDCLRGKVRPGWVEP
SLSVRMEAARALAAWQNNHAPGSMVAQETGWRGLELLLQDYRERFFDASG
RIPLPADFTDEAEYQIQKSLIYAVSLIRAKDGCTPSSIWDFLRTILEAHD
NSHNPFDDSAFLRTVLMGVANLHIGPSQDRAGAGLASDLFPLVHRFLSWH
QEVGSYDHIVEAAALRAMCNLELIRGGIPGQSVDYLQYAKPVPDRVLGKA
ALMNPSSVVSLRLAALEAVARLRVREVKVPGAPTTAAAAKAGEGLEGPIR
ALQWVLSVVQHEKATGSNIFRYKALQIMFETLRHPLDYRPSLVTIHQPIA
LAPTHFLDHLTHEGPAYDKLDAGILNLTHPPCSSRENPFLNSLRSVACAE
ASAGVRRQLWRFITRETWYNQPLRGMAMSLHQAIWGWCPFPLGGGVREGE
GEEMLTTSISSKKDFAGLENVYLELLSQRADGIFSLRSTLFDERDWRVWR
NRRARRLDMLQGQQGAGGRRENGTKTLSWDDLSEDERGERKECLESREAI
TKSNSKVRLKLSIAPSSSSSVIAPSGGAGGDGMYLDG*

mRNA from alignment at chr5:861782..866395-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G03310.1 ID=NO05G03310.1|Name=NO05G03310.1|organism=Nannochloropsis oceanica|type=mRNA|length=4614bp|location=Sequence derived from alignment at chr5:861782..866395- (Nannochloropsis oceanica)
ATGGCGACGGTGGGTGCAGCAGCCACGGCGGCATCCCGGGCCGAGGTTTT
GCATGAGAGCCTAGACCTGCGCGTGGACTTGGAGAAGCGTGAAGTTAAGG
GTCATGCCACCGTCTGGGTGCTGTTGCCGCCCTTACCTGCGGGAGATTTG
GGGACGGTTGACGAGGGCGTTATGGAATACCGGCTGCATGCCCGACAGAT
GGAAATCCACGAGGTCAAAGTGAATGACATGCCGGCCTCCTACATGTACC
CGCACCCCGTCGACCTCCTTCGTGATTTTGTTCCACCCGGGAGCGAAGAC
ATTGATGACAGGGAGAAGAGTGGCTCGTCTGCGCGAATGGACGGGGAGGC
CTTGGACCTTCACTACCGATGTCAACTCATTGCTTCGCAGGAGGGTGAGC
TTAGCCTACAACTGCCCAAGCGACAATCATGGAGGCCACCGCCGTCCGAC
GTCCAAGAGGAAGGCGACGAAACTGTCAAAAATATTCCACAAGTGGTCCT
GAATGCCGGCATAGCTGCCCTCCGGATTTGCAAGATCGAGATTGATTACA
GGTTGCAGAATCCTGTGGCTGGCCTGCGTTTTGATAGTCATCCTGCCCAT
GCCTATAGCATGCGTTGTCCCAGCGTCCTGCACGATTTTGATGGGCCCCG
ATGTTGGTTCCCTTGCGCCGACCGCACTACGGACATTTTTACTCTGGACA
TGGTGGTAGCGGTTGTTTCTCCAGCGTCGTCGAATAGAGGGGAGGTTGGG
AATGGGGACACCGAGGCTAATGACCGAGAGGGCAATCATGTAGGAAAGGT
TGACATTGTGAACGACAGTGGTACCAACAGTAGTAGTAGAGCAAGCACCA
CAATTAGCAACAGCAGCACAGCCATCAACAGAGATGAGGAGCATCCAGTA
GTAGTGCTGGTTGGAGGTGGGCAGCTTTTGGGGAAGGAGAGAAAGGTGGC
GGACGGGACTGTAGTGTGGCGTTATGCAATAGAAACACCCATTACGGCAT
CAGCTGTCTCGCTGGTTGTGGGTCACTTTGGGAAGTATGTGGATCCGGGC
GTGCCTCGATTGACTCACCATTATCTGCTGCGGGAGGAGCGACGAGCAGC
AACCTTCAAAGCTTCCAATGGAAGAAATAGCCTTCCAACAATAGAGAAGC
CATTGCCACCACCACCGCCACCACGATCGTGGGTAAGTCACAGCGTGGAG
GGCATGGGTCCGGCTATGAGCTTTCTGGCGGATTTCTTTCACCTCGCTCC
AGGCGGCGGAGAAGCAGCAACAGGCAGTGCCCCTACCCCTTCTGTCGTAG
TTCCTTACCTCGAGCACCGAATTGTGTTCGTCAAGGGCCTACCTGAGGCC
AGTATGGCTTTCCACGGCCTCTCCTTGCATAGGGTAGAGGACGTGCACCC
TCCTCGTGTGTTCGACCACTCCATGACCTTTCACCTCGCTCTCGCCGAGG
GCCTCTTCGCGTCTTGGCTTCTCCCTCGAGTTCGTCCCCGCTTCACCCGC
GACCGTTGGATCTATCACGGCGTGTTAGGATATCTCGTCCTAATGTACGT
ACGGCGGCGATACGGCGAGCATGAATACCGATATCGTCTGCTGAGATTGA
TGGATGCAGTCACAGCTTTGGAACGCTCGGGGCAAAGCACGCCATTACTG
CCTCCAGACTCAGTCCTTTTGGCGAGTGAGATATACAGTCCTGCTAGCTT
GGAATTGGTGCGAGTCAAGCCTCCAGTGATTATGCATATGATTGAACAGC
GTGTCGGCCGCAAATCTTTGCGAGATGTCCTGCGCTCCGTGGCGTGCCCC
ACGCCCGTCGTGTCGGCAATACCAGCAGCAGCAAGTGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAA
AAGGAGAAAGAGGAGGTGCCAATGCCATGGACGTCAATGATAATGCCCGA
CTCATCGCACCCGCGAACGGCACTTCCACCGCGGGTCATGTCCATCCCCA
GGCATTAAAAACTCTGGGTTTCCTCCGCCTGTGCCTCAAGACGAGCAGTC
GGGGGGACTTTCTCAAGAACCTCCGTGAATGTTGGTTGGAAGGCCGAGGA
CCGGCATATTTCACCGTTTCTTATACCTATGATCGCCGTGCGGCCAAGAC
TGAATTGACGTTAACCATTCGTCAGGTCGTTCCTCCGTGGGGCCGTTTGT
TTGTGGGCACGTTACGGATTCGGATCATGGAGGACGCAGGTCCCTACGAT
TACGATCGAGAGATCAACGAGGCTGAGCATGTATTTACGTTCAAGCTGCA
TTCTAAGGTGCGCAAGACGGGCGGCGGGCGTCGGAAGAAGCTGCAGGTGG
TGGAGGGGGCGGTTGGCGGTGCTACGCCTGTAGGGGGGCCAAATCTGACC
AAGGCGGCGAAGTTTCAGGCAGAGGTAGCAGCAGCATCAGCAGCAGCAGC
AGAAGGAGGAAAGGAGGAAAGTTGTGGCACTGCTAAAGGCAGTGAGGGAG
AGAAGCCGAAAAAGCGTCGCAAGAAGGCCGAACTGGCTGCGGAAGCTGCC
GCTGCACTCAGTGCACCTTACGGTGAAGGACACGGAGGAGGTGAGGCACC
AGCAATAGGAGGAGTGCCTATGGCAACTCCAGCCGTAGGAGCGAGTGTCA
CAAGCATTGGTATGAACATCCGCCGAGACGAGGATGAGTACGCGGCATCG
CGACGCGAGCACTACAGTCCGGTTGTGTGGGTGCGGCTCGATCCGGACTT
GCAGTGGATTACAGAATGGGAATGGGAGAATTTTCCCGAGTATCTCTTTC
TCGAACAGCTCCACCGCGATACCGACGCCGCTGCTCAATGCCTTGCCTTA
CGCGCTCTTAGTGCTTATCCCAAGTCTGGTCAAGATGCAGCGGTTGCAGT
AGGTGCTGGAGGGATGGGGGCGGTGACGCGACCCTCCATGGCAGCTTTGG
CCATGAGTGATTGTCTGAGAGGCAAGGTCCGTCCTGGTTGGGTCGAGCCG
TCGTTGAGCGTGCGGATGGAAGCAGCTCGGGCCTTGGCAGCATGGCAGAA
CAACCATGCACCCGGGTCTATGGTTGCTCAGGAGACGGGTTGGAGGGGTC
TGGAACTCCTCCTTCAAGATTACCGGGAGCGTTTTTTTGATGCCAGTGGT
CGCATACCGTTACCCGCAGATTTCACAGACGAAGCAGAATATCAGATCCA
AAAAAGTTTGATTTACGCCGTCTCTCTCATCCGAGCCAAGGACGGGTGCA
CTCCTTCATCAATCTGGGACTTTCTTCGAACCATTCTTGAGGCACACGAC
AACTCTCACAACCCCTTTGATGACTCCGCCTTTCTCCGCACGGTCCTCAT
GGGTGTCGCCAATCTTCACATTGGCCCTTCCCAAGATCGAGCCGGCGCTG
GCCTCGCCTCTGACCTATTTCCCCTGGTCCATCGATTTTTAAGCTGGCAC
CAAGAAGTCGGCTCGTATGACCATATTGTGGAAGCAGCTGCTCTTCGCGC
CATGTGCAACCTGGAGCTCATCCGTGGAGGGATCCCTGGACAGAGTGTCG
ATTATCTGCAGTACGCCAAGCCCGTGCCTGATCGAGTGCTGGGAAAAGCA
GCACTAATGAACCCTTCCTCCGTCGTGTCCTTGCGTTTGGCGGCCTTGGA
AGCAGTGGCGCGGCTGCGTGTGCGTGAAGTGAAGGTGCCTGGTGCACCGA
CCACGGCGGCAGCGGCAAAGGCGGGAGAAGGGTTGGAGGGACCAATACGG
GCGTTGCAGTGGGTGTTGAGTGTAGTACAGCATGAGAAGGCGACGGGGTC
TAACATTTTCCGGTATAAAGCCCTGCAAATTATGTTTGAAACTTTACGGC
ATCCATTGGATTATCGTCCTTCCTTAGTGACGATCCACCAGCCAATCGCC
TTGGCTCCGACGCATTTCCTCGACCATTTAACGCACGAAGGCCCCGCCTA
CGACAAACTCGATGCAGGCATATTGAATCTCACCCATCCCCCCTGTAGCA
GTCGTGAGAATCCTTTCCTGAATTCGTTGCGTTCAGTGGCATGTGCCGAG
GCGAGTGCGGGCGTCCGGCGGCAATTGTGGCGATTTATCACGCGGGAGAC
ATGGTACAATCAGCCGCTAAGGGGGATGGCGATGTCCTTGCATCAAGCTA
TTTGGGGTTGGTGTCCCTTTCCACTCGGAGGGGGAGTAAGGGAAGGGGAG
GGGGAAGAGATGCTAACGACCAGCATCAGTAGCAAAAAGGATTTTGCGGG
GTTGGAAAATGTGTATCTGGAACTCTTGAGTCAGCGGGCGGATGGGATAT
TTTCCTTACGATCCACTCTATTTGATGAGCGGGACTGGCGGGTGTGGCGA
AACCGACGGGCGCGGCGACTGGACATGTTGCAGGGGCAGCAAGGCGCGGG
GGGTAGGAGGGAGAACGGCACCAAGACTTTGTCCTGGGACGATTTGTCGG
AGGACGAACGCGGCGAGCGTAAGGAGTGTCTGGAGTCCCGAGAGGCTATC
ACCAAGAGTAACTCCAAGGTGCGTCTAAAGCTCTCTATCGCGCCGTCATC
TTCGTCTTCTGTGATAGCACCTTCGGGAGGCGCCGGAGGTGACGGCATGT
ACTTGGATGGATGA

Coding sequence (CDS) from alignment at chr5:861782..866395-

>NO05G03310.1 ID=NO05G03310.1|Name=NO05G03310.1|organism=Nannochloropsis oceanica|type=CDS|length=4614bp|location=Sequence derived from alignment at chr5:861782..866395- (Nannochloropsis oceanica)
ATGGCGACGGTGGGTGCAGCAGCCACGGCGGCATCCCGGGCCGAGGTTTT
GCATGAGAGCCTAGACCTGCGCGTGGACTTGGAGAAGCGTGAAGTTAAGG
GTCATGCCACCGTCTGGGTGCTGTTGCCGCCCTTACCTGCGGGAGATTTG
GGGACGGTTGACGAGGGCGTTATGGAATACCGGCTGCATGCCCGACAGAT
GGAAATCCACGAGGTCAAAGTGAATGACATGCCGGCCTCCTACATGTACC
CGCACCCCGTCGACCTCCTTCGTGATTTTGTTCCACCCGGGAGCGAAGAC
ATTGATGACAGGGAGAAGAGTGGCTCGTCTGCGCGAATGGACGGGGAGGC
CTTGGACCTTCACTACCGATGTCAACTCATTGCTTCGCAGGAGGGTGAGC
TTAGCCTACAACTGCCCAAGCGACAATCATGGAGGCCACCGCCGTCCGAC
GTCCAAGAGGAAGGCGACGAAACTGTCAAAAATATTCCACAAGTGGTCCT
GAATGCCGGCATAGCTGCCCTCCGGATTTGCAAGATCGAGATTGATTACA
GGTTGCAGAATCCTGTGGCTGGCCTGCGTTTTGATAGTCATCCTGCCCAT
GCCTATAGCATGCGTTGTCCCAGCGTCCTGCACGATTTTGATGGGCCCCG
ATGTTGGTTCCCTTGCGCCGACCGCACTACGGACATTTTTACTCTGGACA
TGGTGGTAGCGGTTGTTTCTCCAGCGTCGTCGAATAGAGGGGAGGTTGGG
AATGGGGACACCGAGGCTAATGACCGAGAGGGCAATCATGTAGGAAAGGT
TGACATTGTGAACGACAGTGGTACCAACAGTAGTAGTAGAGCAAGCACCA
CAATTAGCAACAGCAGCACAGCCATCAACAGAGATGAGGAGCATCCAGTA
GTAGTGCTGGTTGGAGGTGGGCAGCTTTTGGGGAAGGAGAGAAAGGTGGC
GGACGGGACTGTAGTGTGGCGTTATGCAATAGAAACACCCATTACGGCAT
CAGCTGTCTCGCTGGTTGTGGGTCACTTTGGGAAGTATGTGGATCCGGGC
GTGCCTCGATTGACTCACCATTATCTGCTGCGGGAGGAGCGACGAGCAGC
AACCTTCAAAGCTTCCAATGGAAGAAATAGCCTTCCAACAATAGAGAAGC
CATTGCCACCACCACCGCCACCACGATCGTGGGTAAGTCACAGCGTGGAG
GGCATGGGTCCGGCTATGAGCTTTCTGGCGGATTTCTTTCACCTCGCTCC
AGGCGGCGGAGAAGCAGCAACAGGCAGTGCCCCTACCCCTTCTGTCGTAG
TTCCTTACCTCGAGCACCGAATTGTGTTCGTCAAGGGCCTACCTGAGGCC
AGTATGGCTTTCCACGGCCTCTCCTTGCATAGGGTAGAGGACGTGCACCC
TCCTCGTGTGTTCGACCACTCCATGACCTTTCACCTCGCTCTCGCCGAGG
GCCTCTTCGCGTCTTGGCTTCTCCCTCGAGTTCGTCCCCGCTTCACCCGC
GACCGTTGGATCTATCACGGCGTGTTAGGATATCTCGTCCTAATGTACGT
ACGGCGGCGATACGGCGAGCATGAATACCGATATCGTCTGCTGAGATTGA
TGGATGCAGTCACAGCTTTGGAACGCTCGGGGCAAAGCACGCCATTACTG
CCTCCAGACTCAGTCCTTTTGGCGAGTGAGATATACAGTCCTGCTAGCTT
GGAATTGGTGCGAGTCAAGCCTCCAGTGATTATGCATATGATTGAACAGC
GTGTCGGCCGCAAATCTTTGCGAGATGTCCTGCGCTCCGTGGCGTGCCCC
ACGCCCGTCGTGTCGGCAATACCAGCAGCAGCAAGTGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAA
AAGGAGAAAGAGGAGGTGCCAATGCCATGGACGTCAATGATAATGCCCGA
CTCATCGCACCCGCGAACGGCACTTCCACCGCGGGTCATGTCCATCCCCA
GGCATTAAAAACTCTGGGTTTCCTCCGCCTGTGCCTCAAGACGAGCAGTC
GGGGGGACTTTCTCAAGAACCTCCGTGAATGTTGGTTGGAAGGCCGAGGA
CCGGCATATTTCACCGTTTCTTATACCTATGATCGCCGTGCGGCCAAGAC
TGAATTGACGTTAACCATTCGTCAGGTCGTTCCTCCGTGGGGCCGTTTGT
TTGTGGGCACGTTACGGATTCGGATCATGGAGGACGCAGGTCCCTACGAT
TACGATCGAGAGATCAACGAGGCTGAGCATGTATTTACGTTCAAGCTGCA
TTCTAAGGTGCGCAAGACGGGCGGCGGGCGTCGGAAGAAGCTGCAGGTGG
TGGAGGGGGCGGTTGGCGGTGCTACGCCTGTAGGGGGGCCAAATCTGACC
AAGGCGGCGAAGTTTCAGGCAGAGGTAGCAGCAGCATCAGCAGCAGCAGC
AGAAGGAGGAAAGGAGGAAAGTTGTGGCACTGCTAAAGGCAGTGAGGGAG
AGAAGCCGAAAAAGCGTCGCAAGAAGGCCGAACTGGCTGCGGAAGCTGCC
GCTGCACTCAGTGCACCTTACGGTGAAGGACACGGAGGAGGTGAGGCACC
AGCAATAGGAGGAGTGCCTATGGCAACTCCAGCCGTAGGAGCGAGTGTCA
CAAGCATTGGTATGAACATCCGCCGAGACGAGGATGAGTACGCGGCATCG
CGACGCGAGCACTACAGTCCGGTTGTGTGGGTGCGGCTCGATCCGGACTT
GCAGTGGATTACAGAATGGGAATGGGAGAATTTTCCCGAGTATCTCTTTC
TCGAACAGCTCCACCGCGATACCGACGCCGCTGCTCAATGCCTTGCCTTA
CGCGCTCTTAGTGCTTATCCCAAGTCTGGTCAAGATGCAGCGGTTGCAGT
AGGTGCTGGAGGGATGGGGGCGGTGACGCGACCCTCCATGGCAGCTTTGG
CCATGAGTGATTGTCTGAGAGGCAAGGTCCGTCCTGGTTGGGTCGAGCCG
TCGTTGAGCGTGCGGATGGAAGCAGCTCGGGCCTTGGCAGCATGGCAGAA
CAACCATGCACCCGGGTCTATGGTTGCTCAGGAGACGGGTTGGAGGGGTC
TGGAACTCCTCCTTCAAGATTACCGGGAGCGTTTTTTTGATGCCAGTGGT
CGCATACCGTTACCCGCAGATTTCACAGACGAAGCAGAATATCAGATCCA
AAAAAGTTTGATTTACGCCGTCTCTCTCATCCGAGCCAAGGACGGGTGCA
CTCCTTCATCAATCTGGGACTTTCTTCGAACCATTCTTGAGGCACACGAC
AACTCTCACAACCCCTTTGATGACTCCGCCTTTCTCCGCACGGTCCTCAT
GGGTGTCGCCAATCTTCACATTGGCCCTTCCCAAGATCGAGCCGGCGCTG
GCCTCGCCTCTGACCTATTTCCCCTGGTCCATCGATTTTTAAGCTGGCAC
CAAGAAGTCGGCTCGTATGACCATATTGTGGAAGCAGCTGCTCTTCGCGC
CATGTGCAACCTGGAGCTCATCCGTGGAGGGATCCCTGGACAGAGTGTCG
ATTATCTGCAGTACGCCAAGCCCGTGCCTGATCGAGTGCTGGGAAAAGCA
GCACTAATGAACCCTTCCTCCGTCGTGTCCTTGCGTTTGGCGGCCTTGGA
AGCAGTGGCGCGGCTGCGTGTGCGTGAAGTGAAGGTGCCTGGTGCACCGA
CCACGGCGGCAGCGGCAAAGGCGGGAGAAGGGTTGGAGGGACCAATACGG
GCGTTGCAGTGGGTGTTGAGTGTAGTACAGCATGAGAAGGCGACGGGGTC
TAACATTTTCCGGTATAAAGCCCTGCAAATTATGTTTGAAACTTTACGGC
ATCCATTGGATTATCGTCCTTCCTTAGTGACGATCCACCAGCCAATCGCC
TTGGCTCCGACGCATTTCCTCGACCATTTAACGCACGAAGGCCCCGCCTA
CGACAAACTCGATGCAGGCATATTGAATCTCACCCATCCCCCCTGTAGCA
GTCGTGAGAATCCTTTCCTGAATTCGTTGCGTTCAGTGGCATGTGCCGAG
GCGAGTGCGGGCGTCCGGCGGCAATTGTGGCGATTTATCACGCGGGAGAC
ATGGTACAATCAGCCGCTAAGGGGGATGGCGATGTCCTTGCATCAAGCTA
TTTGGGGTTGGTGTCCCTTTCCACTCGGAGGGGGAGTAAGGGAAGGGGAG
GGGGAAGAGATGCTAACGACCAGCATCAGTAGCAAAAAGGATTTTGCGGG
GTTGGAAAATGTGTATCTGGAACTCTTGAGTCAGCGGGCGGATGGGATAT
TTTCCTTACGATCCACTCTATTTGATGAGCGGGACTGGCGGGTGTGGCGA
AACCGACGGGCGCGGCGACTGGACATGTTGCAGGGGCAGCAAGGCGCGGG
GGGTAGGAGGGAGAACGGCACCAAGACTTTGTCCTGGGACGATTTGTCGG
AGGACGAACGCGGCGAGCGTAAGGAGTGTCTGGAGTCCCGAGAGGCTATC
ACCAAGAGTAACTCCAAGGTGCGTCTAAAGCTCTCTATCGCGCCGTCATC
TTCGTCTTCTGTGATAGCACCTTCGGGAGGCGCCGGAGGTGACGGCATGT
ACTTGGATGGATGA

Synonyms

Publications