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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr5 | genome | chr5:844756..848224 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO05G03250.1 vs.
Match: EWM28097.1 (cell division protein [Nannochloropsis gaditana]) HSP 1 Score: 455.7 bits (1171), Expect = 1.900e-124 Identity = 256/317 (80.76%), Postives = 273/317 (86.12%), Query Frame = 0
Query: 1 MKVQATLFLGAAIATTTTTTVAFLVPAPISHSSLLSRTTSSFTGAATG----ASRTSARQGTNQSRLFAQSTTNTELHMSLQPEGGGLPCQIKVMGVGGAGGNAVNRMIEESVAGVEFWAINTDAQALKSHKAEKKLNIGQQVTRGLGAGGIPDIGRRAAEESRAEIADAVKGADLVFVTAGMGGGTGSGAAPVVAEVAKEMGALTIGVVTKPFQFEGRRRLNQATMAIEELGKAVDTLIVVSNDKLLQIIEQNTPLDKAFKVADDILRNGVVGITEIIVRPGLINVDFADVRSIMGNAGTALMGMGEGVGKSRAVE 314
MK+ +++ L T +T AF+V P H S S T+SFT + + S R G QSR AQS+++ L MSLQPEGGGLPCQIKVMGVGGAGGNAVNRMIEE+V GVEFWAINTDAQALKSH+AEKKLNIGQQVTRGLGAGGIPDIGRRAAEESRA+IA+AVKGADLVFVTAGMGGGTGSGAAPVVAEVAKEMGALTIGVVTKPFQFEGRRRLNQATMAIEELGKAVDTLIVVSNDKLLQIIEQNTPLDKAFKVADDILRNGVVGITEIIVRPGLINVDFADVRSIMGNAGTALMGMGEGVGK+ E
Sbjct: 35 MKIPSSILLSTI--ATCSTAAAFIVRGPHYHHS--SSRTASFTRPVSTEVCLSPAASRRPGAKQSRSHAQSSSHNGLFMSLQPEGGGLPCQIKVMGVGGAGGNAVNRMIEEAVTGVEFWAINTDAQALKSHQAEKKLNIGQQVTRGLGAGGIPDIGRRAAEESRADIAEAVKGADLVFVTAGMGGGTGSGAAPVVAEVAKEMGALTIGVVTKPFQFEGRRRLNQATMAIEELGKAVDTLIVVSNDKLLQIIEQNTPLDKAFKVADDILRNGVVGITEIIVRPGLINVDFADVRSIMGNAGTALMGMGEGVGKTLPCE 347
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G03250.1 ID=NO05G03250.1|Name=NO05G03250.1|organism=Nannochloropsis oceanica|type=mRNA|length=3469bp GTCCAGGTTAAGTCGACCATTGTCTTCTCTCCTCTTTGTTTAGTTCTATG GTTCTTTTGATAGCACCCGAGTTCTTTTGATTGCACCCTCCGGGGGGGCT TCTTATGGCGAGCGCCGAAGCAGGCCGAGTGTGTCGAGACCCACACACAT TTTATGTGAGAATGGTGGGTGGGCTCTTCTTTTCCCGGCACCCACACCTC CCTTCTCCTCCTCCTCATCCTCCTCCGAAGGTGGCGGAAACTAAGCGTCT CTCCCAAGGCTTGCATAAGGGCCTTAAGTGTGTGAACGTTATTTCTTCCA ACTGCTCGATCCAACTAGACGGCAGCGCAAGCGAAAAATGCAATCCACAC GACGGTGCAAAGACATGACTCTCGTCAAAATAAAAGGCATTCATGTTTAT ACCTAAGAGAGAAAGCAAACTGTGTGCAAACGAAAAAGATAAGGCGAAAG CCTCGTCGCTGTGCTGTCCGTCTGTTAGGCCGTGCATTCGCGCAGAAAAC TGGCCTGTGCGCAGAAAATGAGGTACACACATCCACCACAGAGATCCTTC TGCCATGACGCTTTAACTGGCACGTCCAAACCACAAAGCCACTTGCCTGC GTGAGACCTCGCTGGAGCTAACCAAGTGTCCCCTCCCCTCCTGTGCCACC CACCCGCGCATCACATCCACCTCCTGCCCCCCATCCTCATCTTCCCTACA CAGGCAGAAAGGAGACCCGTCTCCTTCCGTTTTACGACCTTCACCACCTC ATCCCACCCCAGACAAACCATTCAGCCATGAAGGTACAAGCAACCCTCTT CCTGGGTGCGGCAATTGCTACTACCACTACCACCACCGTGGCCTTCCTCG TCCCCGCCCCTATCTCTCACTCTAGCCTCCTCTCAAGAACAACAAGTTCC TTCACCGGCGCGGCCACGGGCGCAAGCCGCACGAGCGCCCGACAAGGCAC CAACCAGTCTCGTCTATTTGCTCAGTCCACGACGAACACGGAGCTGCATA TGTCTTTGCAGCCCGAGGGTGGGGGACTGCCCTGCCAGATCAAGGTAATG GGAGTAGGCGGCGCAGGCGGCAACGCCGTGAACCGGATGATTGAGGAGTC TGTGGCCGGCGTGGAGTTCTGGGCGATCAACACGGACGCCCAGGCGTTGA AGTCGCACAAGGCAGAAAAGAAGCTGAACATTGGACAGCAGGTGACGAGG GGATTAGGTGCGGGTGGGATTCCTGACATTGGTCGACGGGCCGCTGAAGA GAGCAGGGCCGAGATCGCAGATGCTGTGAAGGGGGCGGATTTGGTATTTG TGACGGCGGGGATGGGAGGGGGGACGGGTTCGGGTGCTGCGCCGGTTGTG GCGGAGGTGGCGAAGGAGATGGGGGCGCTGACAATCGGTGTTGTGACAAA GCCGTTTCAGTTCGAGGGACGCAGGAGGTTGAACCAGGCCACGATGGCCA TTGAGGAGTTGGGCAAGGCGGTGGACACATTGATTGTGGTGAGCAACGAC AAGTTGTTGCAGATCATCGAGCAGAACACACCGTTGGACAAGGCGTTCAA GGTCGCTGATGATATTTTGCGAAATGGCGTGGTCGGGATTACCGAGATCA TTGTAAGGCCTGGTTTAATTAATGTCGATTTTGCCGATGTCCGCTCCATC ATGGGCAACGCCGGCACGGCTCTCATGGGGATGGGTGAGGGTGTAGGGAA ATCCCGCGCGGTCGAGGCGGCGGCGGCAGCGATTTCTAGTCCGTTGCTGG AGTTCCCTGTGAACAACGCTAAGGGGATTGTGTTTAACATTATGGGCGGC CCGGATATGACGCTGCAGGAGATCAACTTGGCGAGTAATTACATCTACGA CAACGTGGACCCGAACGCGAACATTATCTTTGGGGCGTTGGTGGATGAGA AATTGGGCGACAAGGTCCGAATCACGGTTTTGGCGACTGGTTTTGACAAC GCCGGCAAGAGCAGCAGCACCAGCAGCACCCTGCCCCTGACGGTCGGGAA GAAGGACTCCGCTTCCAAGCAACAGCAGTCCCCCTCCTCCTCTTCCTCGT CCAGTAGCCTATCTACGACTGCCGCAGGAGCCGCGGCTGCTGCCAATGCG CGACAGCAGCAGATGGATGACGACCTTGCTTTGAGCGAGGATCGCCTTCC TGCCCGCCCCAAGGAGCCTGTTTACCAGCAGCAGCCACCACCCCCTCCCC CTGCCCAGCAAGCCCCCCAGCAAGACCAAAGCTTTCTGCAAAGCTTCCGA CGGATGTAAAAGAAGGAGAAGGAGTTCAGAGGGAAGAAGGGCCAGGGAGC GCGAGGAGGGAGAGGCAAGTTAATTACTTTTTTTTATTCTCATTTTTTCG TCGTCGTCGTTGTCTTGGAGAATGTGAGGACTTCGAAAAGAAGAGAAGGA AGGCATGGGTGGATGGATAGATATGTGGATGGATGGAGGGAAAAAGGAAG AGTGAAGAGAGAAGAGAGAAAGCACCCCGTTCTGGTAGTAAGAGGATGAA AGGAAGACATCATATGAGTGCACCCACATCCCGATTTTCATTTTTTACGT GTTTCTGTGTCTTGGTTGAAAATATTGAAAAGAAGGAACGAGAGGGTGAG ATATAGAAGTAGAAAAGGTGCTTGAATGGTCAGTATCTCGGGGAAAAAGG AAGGAGGAGGGAGGGAGGGAGGGAGGAATTTGCGCACAGCATGCGCGCCT CCGTCTGTGCCTGTGTGTGTCTGTAGTTGTATGCGTCTGAGATTGTCATT TATTAGTTCTCGCGACTGAAACAAGCAGAAAGCAACATCCAGGTCTCTCA TTTTAATTGGGACTTCACTAGTGTTCCTCTTACCTCCACCTCCCCCTCCC CCTGCCCCCGTACCGGCTCGTCTGGCGCCCACTGCTCCTTTCCCCCGCTT TTTGTGCGTTCTTCTTTTTTGCTACGACAGCATGTGTACTTAGTTAGGAG GAAATCGCCCTTAATCTCATCCCACCACAACTATCATCCTCCCGTCACTA GCGTTTGCATAGTGTGTCCTTGCGCCTGGAATGACGGACAAAGCGGAACC GATAAAGATCGAAATCAAAAGAACGGAACACGTCTGTCATAAAGGTGAAT AATTCACAATGCCCCAAGCACTCGTCATCGAGCAAGAGTCAAGCAGAAGT AGAAGCCGAAACAGCGAATTTGAGAGAAGGGGGAGAAGAGAAAAAGAAGA AACAAACTTAAAGCTAGCACCCAGCTACCGCAGAAAGGCCATGCCAGCGT TTAAACCCCTTCTTCCTTTACGCTTCTTGTTCTCACTGCAGAGAGCTCTT TGAAACCACAATGGATGATAGATATTCCTCATTTCCCCCTTGTCTGCGAC ACCTGTTCACACTCTCTCCCTCTCTCACTCCCCCCCCCCTCTTCCTTCCC CCCCTCTCTCTAGCTCGCCTTCGACCAAGCCCGATATCCCAACTCACTAC ATGCTCTTTTCAAGCCCCG back to topprotein sequence of NO05G03250.1 >NO05G03250.1-protein ID=NO05G03250.1-protein|Name=NO05G03250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=494bp MKVQATLFLGAAIATTTTTTVAFLVPAPISHSSLLSRTTSSFTGAATGAS RTSARQGTNQSRLFAQSTTNTELHMSLQPEGGGLPCQIKVMGVGGAGGNA VNRMIEESVAGVEFWAINTDAQALKSHKAEKKLNIGQQVTRGLGAGGIPD IGRRAAEESRAEIADAVKGADLVFVTAGMGGGTGSGAAPVVAEVAKEMGA LTIGVVTKPFQFEGRRRLNQATMAIEELGKAVDTLIVVSNDKLLQIIEQN TPLDKAFKVADDILRNGVVGITEIIVRPGLINVDFADVRSIMGNAGTALM GMGEGVGKSRAVEAAAAAISSPLLEFPVNNAKGIVFNIMGGPDMTLQEIN LASNYIYDNVDPNANIIFGALVDEKLGDKVRITVLATGFDNAGKSSSTSS TLPLTVGKKDSASKQQQSPSSSSSSSSLSTTAAGAAAAANARQQQMDDDL ALSEDRLPARPKEPVYQQQPPPPPPAQQAPQQDQSFLQSFRRM* back to topmRNA from alignment at chr5:844756..848224+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G03250.1 ID=NO05G03250.1|Name=NO05G03250.1|organism=Nannochloropsis oceanica|type=mRNA|length=3469bp|location=Sequence derived from alignment at chr5:844756..848224+ (Nannochloropsis oceanica) GTCCAGGTTAAGTCGACCATTGTCTTCTCTCCTCTTTGTTTAGTTCTATG
GTTCTTTTGATAGCACCCGAGTTCTTTTGATTGCACCCTCCGGGGGGGCT
TCTTATGGCGAGCGCCGAAGCAGGCCGAGTGTGTCGAGACCCACACACAT
TTTATGTGAGAATGGTGGGTGGGCTCTTCTTTTCCCGGCACCCACACCTC
CCTTCTCCTCCTCCTCATCCTCCTCCGAAGGTGGCGGAAACTAAGCGTCT
CTCCCAAGGCTTGCATAAGGGCCTTAAGTGTGTGAACGTTATTTCTTCCA
ACTGCTCGATCCAACTAGACGGCAGCGCAAGCGAAAAATGCAATCCACAC
GACGGTGCAAAGACATGACTCTCGTCAAAATAAAAGGCATTCATGTTTAT
ACCTAAGAGAGAAAGCAAACTGTGTGCAAACGAAAAAGATAAGGCGAAAG
CCTCGTCGCTGTGCTGTCCGTCTGTTAGGCCGTGCATTCGCGCAGAAAAC
TGGCCTGTGCGCAGAAAATGAGGTACACACATCCACCACAGAGATCCTTC
TGCCATGACGCTTTAACTGGCACGTCCAAACCACAAAGCCACTTGCCTGC
GTGAGACCTCGCTGGAGCTAACCAAGTGTCCCCTCCCCTCCTGTGCCACC
CACCCGCGCATCACATCCACCTCCTGCCCCCCATCCTCATCTTCCCTACA
CAGGCAGAAAGGAGACCCGTCTCCTTCCGTTTTACGACCTTCACCACCTC
ATCCCACCCCAGACAAACCATTCAGCCATGAAGGTACAAGCAACCCTCTT
CCTGGGTGCGGCAATTGCTACTACCACTACCACCACCGTGGCCTTCCTCG
TCCCCGCCCCTATCTCTCACTCTAGCCTCCTCTCAAGAACAACAAGTTCC
TTCACCGGCGCGGCCACGGGCGCAAGCCGCACGAGCGCCCGACAAGGCAC
CAACCAGTCTCGTCTATTTGCTCAGTCCACGACGAACACGGAGCTGCATA
TGTCTTTGCAGCCCGAGGGTGGGGGACTGCCCTGCCAGATCAAGGTAATG
GGAGTAGGCGGCGCAGGCGGCAACGCCGTGAACCGGATGATTGAGGAGTC
TGTGGCCGGCGTGGAGTTCTGGGCGATCAACACGGACGCCCAGGCGTTGA
AGTCGCACAAGGCAGAAAAGAAGCTGAACATTGGACAGCAGGTGACGAGG
GGATTAGGTGCGGGTGGGATTCCTGACATTGGTCGACGGGCCGCTGAAGA
GAGCAGGGCCGAGATCGCAGATGCTGTGAAGGGGGCGGATTTGGTATTTG
TGACGGCGGGGATGGGAGGGGGGACGGGTTCGGGTGCTGCGCCGGTTGTG
GCGGAGGTGGCGAAGGAGATGGGGGCGCTGACAATCGGTGTTGTGACAAA
GCCGTTTCAGTTCGAGGGACGCAGGAGGTTGAACCAGGCCACGATGGCCA
TTGAGGAGTTGGGCAAGGCGGTGGACACATTGATTGTGGTGAGCAACGAC
AAGTTGTTGCAGATCATCGAGCAGAACACACCGTTGGACAAGGCGTTCAA
GGTCGCTGATGATATTTTGCGAAATGGCGTGGTCGGGATTACCGAGATCA
TTGTAAGGCCTGGTTTAATTAATGTCGATTTTGCCGATGTCCGCTCCATC
ATGGGCAACGCCGGCACGGCTCTCATGGGGATGGGTGAGGGTGTAGGGAA
ATCCCGCGCGGTCGAGGCGGCGGCGGCAGCGATTTCTAGTCCGTTGCTGG
AGTTCCCTGTGAACAACGCTAAGGGGATTGTGTTTAACATTATGGGCGGC
CCGGATATGACGCTGCAGGAGATCAACTTGGCGAGTAATTACATCTACGA
CAACGTGGACCCGAACGCGAACATTATCTTTGGGGCGTTGGTGGATGAGA
AATTGGGCGACAAGGTCCGAATCACGGTTTTGGCGACTGGTTTTGACAAC
GCCGGCAAGAGCAGCAGCACCAGCAGCACCCTGCCCCTGACGGTCGGGAA
GAAGGACTCCGCTTCCAAGCAACAGCAGTCCCCCTCCTCCTCTTCCTCGT
CCAGTAGCCTATCTACGACTGCCGCAGGAGCCGCGGCTGCTGCCAATGCG
CGACAGCAGCAGATGGATGACGACCTTGCTTTGAGCGAGGATCGCCTTCC
TGCCCGCCCCAAGGAGCCTGTTTACCAGCAGCAGCCACCACCCCCTCCCC
CTGCCCAGCAAGCCCCCCAGCAAGACCAAAGCTTTCTGCAAAGCTTCCGA
CGGATGTAAAAGAAGGAGAAGGAGTTCAGAGGGAAGAAGGGCCAGGGAGC
GCGAGGAGGGAGAGGCAAGTTAATTACTTTTTTTTATTCTCATTTTTTCG
TCGTCGTCGTTGTCTTGGAGAATGTGAGGACTTCGAAAAGAAGAGAAGGA
AGGCATGGGTGGATGGATAGATATGTGGATGGATGGAGGGAAAAAGGAAG
AGTGAAGAGAGAAGAGAGAAAGCACCCCGTTCTGGTAGTAAGAGGATGAA
AGGAAGACATCATATGAGTGCACCCACATCCCGATTTTCATTTTTTACGT
GTTTCTGTGTCTTGGTTGAAAATATTGAAAAGAAGGAACGAGAGGGTGAG
ATATAGAAGTAGAAAAGGTGCTTGAATGGTCAGTATCTCGGGGAAAAAGG
AAGGAGGAGGGAGGGAGGGAGGGAGGAATTTGCGCACAGCATGCGCGCCT
CCGTCTGTGCCTGTGTGTGTCTGTAGTTGTATGCGTCTGAGATTGTCATT
TATTAGTTCTCGCGACTGAAACAAGCAGAAAGCAACATCCAGGTCTCTCA
TTTTAATTGGGACTTCACTAGTGTTCCTCTTACCTCCACCTCCCCCTCCC
CCTGCCCCCGTACCGGCTCGTCTGGCGCCCACTGCTCCTTTCCCCCGCTT
TTTGTGCGTTCTTCTTTTTTGCTACGACAGCATGTGTACTTAGTTAGGAG
GAAATCGCCCTTAATCTCATCCCACCACAACTATCATCCTCCCGTCACTA
GCGTTTGCATAGTGTGTCCTTGCGCCTGGAATGACGGACAAAGCGGAACC
GATAAAGATCGAAATCAAAAGAACGGAACACGTCTGTCATAAAGGTGAAT
AATTCACAATGCCCCAAGCACTCGTCATCGAGCAAGAGTCAAGCAGAAGT
AGAAGCCGAAACAGCGAATTTGAGAGAAGGGGGAGAAGAGAAAAAGAAGA
AACAAACTTAAAGCTAGCACCCAGCTACCGCAGAAAGGCCATGCCAGCGT
TTAAACCCCTTCTTCCTTTACGCTTCTTGTTCTCACTGCAGAGAGCTCTT
TGAAACCACAATGGATGATAGATATTCCTCATTTCCCCCTTGTCTGCGAC
ACCTGTTCACACTCTCTCCCTCTCTCACTCCCCCCCCCCTCTTCCTTCCC
CCCCTCTCTCTAGCTCGCCTTCGACCAAGCCCGATATCCCAACTCACTAC
ATGCTCTTTTCAAGCCCCG back to topCoding sequence (CDS) from alignment at chr5:844756..848224+ >NO05G03250.1 ID=NO05G03250.1|Name=NO05G03250.1|organism=Nannochloropsis oceanica|type=CDS|length=1482bp|location=Sequence derived from alignment at chr5:844756..848224+ (Nannochloropsis oceanica) ATGAAGGTACAAGCAACCCTCTTCCTGGGTGCGGCAATTGCTACTACCAC TACCACCACCGTGGCCTTCCTCGTCCCCGCCCCTATCTCTCACTCTAGCC TCCTCTCAAGAACAACAAGTTCCTTCACCGGCGCGGCCACGGGCGCAAGC CGCACGAGCGCCCGACAAGGCACCAACCAGTCTCGTCTATTTGCTCAGTC CACGACGAACACGGAGCTGCATATGTCTTTGCAGCCCGAGGGTGGGGGAC TGCCCTGCCAGATCAAGGTAATGGGAGTAGGCGGCGCAGGCGGCAACGCC GTGAACCGGATGATTGAGGAGTCTGTGGCCGGCGTGGAGTTCTGGGCGAT CAACACGGACGCCCAGGCGTTGAAGTCGCACAAGGCAGAAAAGAAGCTGA ACATTGGACAGCAGGTGACGAGGGGATTAGGTGCGGGTGGGATTCCTGAC ATTGGTCGACGGGCCGCTGAAGAGAGCAGGGCCGAGATCGCAGATGCTGT GAAGGGGGCGGATTTGGTATTTGTGACGGCGGGGATGGGAGGGGGGACGG GTTCGGGTGCTGCGCCGGTTGTGGCGGAGGTGGCGAAGGAGATGGGGGCG CTGACAATCGGTGTTGTGACAAAGCCGTTTCAGTTCGAGGGACGCAGGAG GTTGAACCAGGCCACGATGGCCATTGAGGAGTTGGGCAAGGCGGTGGACA CATTGATTGTGGTGAGCAACGACAAGTTGTTGCAGATCATCGAGCAGAAC ACACCGTTGGACAAGGCGTTCAAGGTCGCTGATGATATTTTGCGAAATGG CGTGGTCGGGATTACCGAGATCATTGTAAGGCCTGGTTTAATTAATGTCG ATTTTGCCGATGTCCGCTCCATCATGGGCAACGCCGGCACGGCTCTCATG GGGATGGGTGAGGGTGTAGGGAAATCCCGCGCGGTCGAGGCGGCGGCGGC AGCGATTTCTAGTCCGTTGCTGGAGTTCCCTGTGAACAACGCTAAGGGGA TTGTGTTTAACATTATGGGCGGCCCGGATATGACGCTGCAGGAGATCAAC TTGGCGAGTAATTACATCTACGACAACGTGGACCCGAACGCGAACATTAT CTTTGGGGCGTTGGTGGATGAGAAATTGGGCGACAAGGTCCGAATCACGG TTTTGGCGACTGGTTTTGACAACGCCGGCAAGAGCAGCAGCACCAGCAGC ACCCTGCCCCTGACGGTCGGGAAGAAGGACTCCGCTTCCAAGCAACAGCA GTCCCCCTCCTCCTCTTCCTCGTCCAGTAGCCTATCTACGACTGCCGCAG GAGCCGCGGCTGCTGCCAATGCGCGACAGCAGCAGATGGATGACGACCTT GCTTTGAGCGAGGATCGCCTTCCTGCCCGCCCCAAGGAGCCTGTTTACCA GCAGCAGCCACCACCCCCTCCCCCTGCCCAGCAAGCCCCCCAGCAAGACC AAAGCTTTCTGCAAAGCTTCCGACGGATGTAA back to top
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