NO05G02890.1, NO05G02890.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G02890.1
Unique NameNO05G02890.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1893
Alignment locationchr5:757502..759899 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:757502..759899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO05G02890.1 vs.
Match: EWM28259.1 (aspartate kinase [Nannochloropsis gaditana])

HSP 1 Score: 799.3 bits (2063), Expect = 7.700e-228
Identity = 425/538 (79.00%), Postives = 466/538 (86.62%), Query Frame = 0 
Query:   15 MAAHQCAHAFVPHFASTKGAAPSVHTFIGPSSREGLLDATAAESKDQRRKGWTLMVALPTASVKT----ESAAVAPAAGNEPPKQKTTRVIMKFGGSSLANSERVDYVAKLIKSQIEKGFRPTVVCSAMGKTTNNLLNAGHFALEGNVYVDSLRTLHLTTAQELGMSNDTIASIEELLDELKNLLNGVSYLRELTPRTLDYLVSFGERLSVRIMAARLNQLGVPAQHFESWNLGLRTTSDFGKAEILPECYDTIKTAMKKLDGSMVAVVTGFIGHDPEGRITTLGRGGSDLTASTLGAAVPVDEIQVWKDVNGIMTANPRVVSNAIPVPFVSFEEASELAYFGAEILHPISMGPAMRFNIPVRVKNSYNPDHPGTVIWDDNDKTQLVTAITSKRHVDLVDIVSTWMLGQYGFLSRVFSIFEEQKISVDCVATSEVSISLTLDAKKHDDDAEGRLVKALSDVAAVTVHPNRAIVSLIANVARSSEVLSIVFDALKEAGIQVEMLSQGASKVNISLIVKDEDAERCTQILHDRFFYPNGA 549
            + A Q   AFVP F   KG+ P++ T   PS+R   L   A      RR+G  L+++L  AS K+    E+     +A +    QK  RVIMKFGGSSLAN+ERVDYVA LIKSQIE+G+RPTVVCSAMGKTTNNLLNAGHFALEG+VY+DSLRTLHL+TAQELGM ++ +A++EELLDELKNLL+GVS LRELTPRTLDYLVSFGERLSVRI+AARLNQLGVPAQHFESW+LGLRT SDFGKAEILPE Y  IK AMKKLD SMVAVVTGFIGHD EGRITTLGRGGSDLTAST+GAAVPVDEIQVWKDVNGIMTANP+VVSNA+PVPFVSFEEASELAYFGAEILHPISM PAMR+NI VRVKNSYNPDHPGTVI  D D TQLVTAITSKR+V+L+DIVSTWMLGQYGFLSRVFSIFEEQK+SVDCVATSEVSISLTLD KK DD AE RLVKALS++AAVTVH +RAI+SLIANVARSSEVLSIVF+ALKEAGIQVEMLSQGASKVNISLIVKDEDAERCTQILHDRFF  + A
Sbjct:   38 LVAKQSVQAFVPRF---KGSGPAIVT--QPSAR--FLGPKAMPVTRSRREGLDLVMSLSEASAKSTKVGEAETEVESADHRQSNQKAIRVIMKFGGSSLANAERVDYVASLIKSQIEQGYRPTVVCSAMGKTTNNLLNAGHFALEGSVYIDSLRTLHLSTAQELGMGDEVLAALEELLDELKNLLSGVSCLRELTPRTLDYLVSFGERLSVRIVAARLNQLGVPAQHFESWSLGLRTNSDFGKAEILPESYSAIKEAMKKLDDSMVAVVTGFIGHDSEGRITTLGRGGSDLTASTIGAAVPVDEIQVWKDVNGIMTANPKVVSNAVPVPFVSFEEASELAYFGAEILHPISMVPAMRYNIQVRVKNSYNPDHPGTVILADKDYTQLVTAITSKRNVELLDIVSTWMLGQYGFLSRVFSIFEEQKVSVDCVATSEVSISLTLDTKKQDDHAEDRLVKALSEIAAVTVHRDRAIISLIANVARSSEVLSIVFNALKEAGIQVEMLSQGASKVNISLIVKDEDAERCTQILHDRFFGESSA 568
The following BLAST results are available for this feature:
BLAST of NO05G02890.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28259.17.700e-22879.00aspartate kinase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02890NO05G02890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G02890.1NO05G02890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G02890.1.cds1NO05G02890.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02890.1.cds2NO05G02890.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02890.1.cds3NO05G02890.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G02890.1 ID=NO05G02890.1|Name=NO05G02890.1|organism=Nannochloropsis oceanica|type=mRNA|length=1893bp
ACAGGGCCAGCAAGCTCGGCTTCGGCCACAATCATGCGCGTGCCACCGCA
GACATGCTTACTCGTCCTGCTGGCGATGGCCGCACACCAATGCGCGCATG
CTTTCGTGCCGCACTTCGCCTCCACCAAGGGGGCAGCGCCATCCGTGCAT
ACTTTCATTGGTCCAAGCAGCCGCGAAGGGCTTTTGGATGCGACAGCAGC
CGAAAGTAAAGACCAGAGACGGAAAGGCTGGACCCTCATGGTGGCGCTCC
CCACGGCCAGTGTCAAAACCGAATCAGCGGCCGTAGCGCCTGCAGCAGGC
AATGAGCCCCCCAAGCAAAAGACAACACGCGTCATCATGAAGTTCGGCGG
CAGTTCCCTGGCCAATTCAGAGCGCGTGGACTACGTGGCAAAATTAATCA
AATCCCAGATCGAAAAGGGCTTCCGACCCACGGTCGTCTGCTCGGCCATG
GGCAAAACCACCAACAACCTGCTCAACGCCGGGCATTTCGCTTTGGAGGG
TAACGTGTACGTGGATTCCCTCCGGACTTTGCATTTGACGACGGCTCAAG
AGTTGGGCATGAGCAATGATACGATTGCTTCGATTGAGGAGCTGCTGGAC
GAGTTGAAGAATTTGCTGAACGGGGTGTCGTACTTGCGGGAGCTGACACC
GCGCACACTCGACTATTTGGTATCCTTCGGCGAGCGTCTGTCCGTGCGCA
TCATGGCCGCCCGCCTGAACCAACTCGGCGTACCCGCGCAGCACTTCGAG
TCCTGGAATCTTGGGCTGCGGACCACGAGCGACTTCGGCAAGGCTGAAAT
CTTGCCCGAGTGCTACGACACAATCAAAACAGCAATGAAAAAGCTCGACG
GCTCAATGGTAGCAGTTGTAACGGGCTTCATCGGCCATGATCCCGAAGGG
CGAATCACCACGCTAGGTCGAGGCGGCTCTGATCTGACGGCATCGACACT
GGGTGCGGCGGTGCCGGTGGATGAAATCCAGGTCTGGAAGGACGTAAATG
GCATTATGACAGCTAACCCCAGGGTGGTATCCAATGCTATCCCTGTTCCC
TTTGTCTCGTTCGAAGAGGCCTCAGAACTGGCATATTTTGGAGCCGAAAT
TCTTCACCCGATTAGTATGGGACCGGCGATGCGGTTCAATATCCCTGTGC
GTGTAAAGAACTCTTACAATCCTGATCATCCGGGTACTGTCATTTGGGAC
GATAATGACAAGACGCAGTTGGTGACGGCGATTACGAGCAAGCGGCATGT
GGATCTGGTGGACATCGTCAGTACGTGGATGTTGGGGCAGTACGGGTTTT
TGAGCCGGGTTTTCAGCATTTTCGAGGAACAGAAGATTTCGGTGGACTGC
GTGGCGACCAGTGAGGTGTCTATTTCTCTTACTCTAGATGCGAAGAAGCA
CGATGACGACGCAGAGGGCCGTTTGGTTAAAGCTTTGAGTGATGTTGCCG
CGGTGACCGTGCACCCGAACCGGGCCATTGTCTCGCTCATTGCTAATGTG
GCTAGGTCATCAGAGGTCCTTTCCATTGTGTTCGATGCCCTCAAAGAGGC
TGGAATTCAAGTGGAGATGCTTTCGCAGGGTGCCAGCAAAGTCAACATCA
GCCTCATCGTCAAAGACGAAGATGCAGAGCGTTGCACCCAGATCCTCCAC
GATCGATTCTTCTACCCCAATGGTGCGCCTCCGGTTGAAGCCCAGTGAGG
AAATTCGGTAGGCAAGAGGTATGAGGGAATGTGGGGGGTGGTGCCATTAG
AGACGTGTGTAGCGGAGGCATGACGTAAAATAAATGAAATATTATGGGTA
TAATTCTTTAAAGAGGGTATGATGACAAGCCTTTTTTTGACACAAGACTA
CAAGAAAGAAAGATTGAACACGTGGTAACGGCGGTCTCTCACA
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protein sequence of NO05G02890.1

>NO05G02890.1-protein ID=NO05G02890.1-protein|Name=NO05G02890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bp
MRVPPQTCLLVLLAMAAHQCAHAFVPHFASTKGAAPSVHTFIGPSSREGL
LDATAAESKDQRRKGWTLMVALPTASVKTESAAVAPAAGNEPPKQKTTRV
IMKFGGSSLANSERVDYVAKLIKSQIEKGFRPTVVCSAMGKTTNNLLNAG
HFALEGNVYVDSLRTLHLTTAQELGMSNDTIASIEELLDELKNLLNGVSY
LRELTPRTLDYLVSFGERLSVRIMAARLNQLGVPAQHFESWNLGLRTTSD
FGKAEILPECYDTIKTAMKKLDGSMVAVVTGFIGHDPEGRITTLGRGGSD
LTASTLGAAVPVDEIQVWKDVNGIMTANPRVVSNAIPVPFVSFEEASELA
YFGAEILHPISMGPAMRFNIPVRVKNSYNPDHPGTVIWDDNDKTQLVTAI
TSKRHVDLVDIVSTWMLGQYGFLSRVFSIFEEQKISVDCVATSEVSISLT
LDAKKHDDDAEGRLVKALSDVAAVTVHPNRAIVSLIANVARSSEVLSIVF
DALKEAGIQVEMLSQGASKVNISLIVKDEDAERCTQILHDRFFYPNGAPP
VEAQ*
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mRNA from alignment at chr5:757502..759899+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G02890.1 ID=NO05G02890.1|Name=NO05G02890.1|organism=Nannochloropsis oceanica|type=mRNA|length=2398bp|location=Sequence derived from alignment at chr5:757502..759899+ (Nannochloropsis oceanica)
ACAGGGCCAGCAAGCTCGGCTTCGGCCACAATCATGCGCGTGCCACCGCA
GACATGCTTACTCGTCCTGCTGGCGATGGCCGCACACCAATGCGCGCATG
CTTTCGTGCCGCACTTCGCCTCCACCAAGGGGGCAGCGCCATCCGTGCAT
ACTTTCATTGGTCCAAGCAGCCGCGAAGGGCTTTTGGATGCGACAGCAGC
CGAAAGTAAAGACCAGAGACGGAAAGGCTGGACCCTCATGGTGGCGCTCC
CCACGGCCAGTGTCAAAGTAAGTCTCCGGGAGGGATTGGGGCGGGGAGGC
TACGTTGTGCGGGTAGTAGTATGGCGACACTTGCACAGTAATTGAGCTGC
ATTAGAGGGTGGATTGAAGGTTTTCATGCCAAGCATTAAATGTTCCCTGT
AGCAGCGGCGACAGGCGGCCTTGCTCCCCACAATCCGTCCGCTAGTATCA
CCGTCGTTTCCCCTCAAACGACACACACGAATGTCTTACCCATTTCTACC
CGCGCGGGAGCAATTCTGTCCATTTATCATCCACCACCATCCACCCGTAC
TCCCACCAACTGATTAGTACCTTTGCAACGCATGCACACATACCCCCCAG
ACCGAATCAGCGGCCGTAGCGCCTGCAGCAGGCAATGAGCCCCCCAAGCA
AAAGACAACACGCGTCATCATGAAGTTCGGCGGCAGTTCCCTGGCCAATT
CAGAGCGCGTGGACTACGTGGCAAAATTAATCAAATCCCAGATCGAAAAG
GGCTTCCGACCCACGGTCGTCTGCTCGGCCATGGGCAAAACCACCAACAA
CCTGCTCAACGCCGGGCATTTCGCTTTGGAGGGTAACGTGTACGTGGATT
CCCTCCGGACTTTGCATTTGACGACGGCTCAAGAGTTGGGCATGAGCAAT
GATACGATTGCTTCGATTGAGGAGCTGCTGGACGAGTTGAAGAATTTGCT
GAACGGGGTGTCGTACTTGCGGGAGCTGACACCGCGCACACTCGACTATT
TGGTGAGAAAATTTTGCGTTTTACGCGTGCTAAATGGGTAGTCATTCTTG
GCCTCCGAGCTTATTCTTTCTCATCAAAGATATTACTTTATATACTTCGA
GACCGCCCCAAATTTGATCTATCATAACACATCCATATCCACCTTTACTC
CCCTCCTCCCTGAACCTTCCACAGGTATCCTTCGGCGAGCGTCTGTCCGT
GCGCATCATGGCCGCCCGCCTGAACCAACTCGGCGTACCCGCGCAGCACT
TCGAGTCCTGGAATCTTGGGCTGCGGACCACGAGCGACTTCGGCAAGGCT
GAAATCTTGCCCGAGTGCTACGACACAATCAAAACAGCAATGAAAAAGCT
CGACGGCTCAATGGTAGCAGTTGTAACGGGCTTCATCGGCCATGATCCCG
AAGGGCGAATCACCACGCTAGGTCGAGGCGGCTCTGATCTGACGGCATCG
ACACTGGGTGCGGCGGTGCCGGTGGATGAAATCCAGGTCTGGAAGGACGT
AAATGGCATTATGACAGCTAACCCCAGGGTGGTATCCAATGCTATCCCTG
TTCCCTTTGTCTCGTTCGAAGAGGCCTCAGAACTGGCATATTTTGGAGCC
GAAATTCTTCACCCGATTAGTATGGGACCGGCGATGCGGTTCAATATCCC
TGTGCGTGTAAAGAACTCTTACAATCCTGATCATCCGGGTACTGTCATTT
GGGACGATAATGACAAGACGCAGTTGGTGACGGCGATTACGAGCAAGCGG
CATGTGGATCTGGTGGACATCGTCAGTACGTGGATGTTGGGGCAGTACGG
GTTTTTGAGCCGGGTTTTCAGCATTTTCGAGGAACAGAAGATTTCGGTGG
ACTGCGTGGCGACCAGTGAGGTGTCTATTTCTCTTACTCTAGATGCGAAG
AAGCACGATGACGACGCAGAGGGCCGTTTGGTTAAAGCTTTGAGTGATGT
TGCCGCGGTGACCGTGCACCCGAACCGGGCCATTGTCTCGCTCATTGCTA
ATGTGGCTAGGTCATCAGAGGTCCTTTCCATTGTGTTCGATGCCCTCAAA
GAGGCTGGAATTCAAGTGGAGATGCTTTCGCAGGGTGCCAGCAAAGTCAA
CATCAGCCTCATCGTCAAAGACGAAGATGCAGAGCGTTGCACCCAGATCC
TCCACGATCGATTCTTCTACCCCAATGGTGCGCCTCCGGTTGAAGCCCAG
TGAGGAAATTCGGTAGGCAAGAGGTATGAGGGAATGTGGGGGGTGGTGCC
ATTAGAGACGTGTGTAGCGGAGGCATGACGTAAAATAAATGAAATATTAT
GGGTATAATTCTTTAAAGAGGGTATGATGACAAGCCTTTTTTTGACACAA
GACTACAAGAAAGAAAGATTGAACACGTGGTAACGGCGGTCTCTCACA
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Coding sequence (CDS) from alignment at chr5:757502..759899+

>NO05G02890.1 ID=NO05G02890.1|Name=NO05G02890.1|organism=Nannochloropsis oceanica|type=CDS|length=1665bp|location=Sequence derived from alignment at chr5:757502..759899+ (Nannochloropsis oceanica)
ATGCGCGTGCCACCGCAGACATGCTTACTCGTCCTGCTGGCGATGGCCGC
ACACCAATGCGCGCATGCTTTCGTGCCGCACTTCGCCTCCACCAAGGGGG
CAGCGCCATCCGTGCATACTTTCATTGGTCCAAGCAGCCGCGAAGGGCTT
TTGGATGCGACAGCAGCCGAAAGTAAAGACCAGAGACGGAAAGGCTGGAC
CCTCATGGTGGCGCTCCCCACGGCCAGTGTCAAAACCGAATCAGCGGCCG
TAGCGCCTGCAGCAGGCAATGAGCCCCCCAAGCAAAAGACAACACGCGTC
ATCATGAAGTTCGGCGGCAGTTCCCTGGCCAATTCAGAGCGCGTGGACTA
CGTGGCAAAATTAATCAAATCCCAGATCGAAAAGGGCTTCCGACCCACGG
TCGTCTGCTCGGCCATGGGCAAAACCACCAACAACCTGCTCAACGCCGGG
CATTTCGCTTTGGAGGGTAACGTGTACGTGGATTCCCTCCGGACTTTGCA
TTTGACGACGGCTCAAGAGTTGGGCATGAGCAATGATACGATTGCTTCGA
TTGAGGAGCTGCTGGACGAGTTGAAGAATTTGCTGAACGGGGTGTCGTAC
TTGCGGGAGCTGACACCGCGCACACTCGACTATTTGGTATCCTTCGGCGA
GCGTCTGTCCGTGCGCATCATGGCCGCCCGCCTGAACCAACTCGGCGTAC
CCGCGCAGCACTTCGAGTCCTGGAATCTTGGGCTGCGGACCACGAGCGAC
TTCGGCAAGGCTGAAATCTTGCCCGAGTGCTACGACACAATCAAAACAGC
AATGAAAAAGCTCGACGGCTCAATGGTAGCAGTTGTAACGGGCTTCATCG
GCCATGATCCCGAAGGGCGAATCACCACGCTAGGTCGAGGCGGCTCTGAT
CTGACGGCATCGACACTGGGTGCGGCGGTGCCGGTGGATGAAATCCAGGT
CTGGAAGGACGTAAATGGCATTATGACAGCTAACCCCAGGGTGGTATCCA
ATGCTATCCCTGTTCCCTTTGTCTCGTTCGAAGAGGCCTCAGAACTGGCA
TATTTTGGAGCCGAAATTCTTCACCCGATTAGTATGGGACCGGCGATGCG
GTTCAATATCCCTGTGCGTGTAAAGAACTCTTACAATCCTGATCATCCGG
GTACTGTCATTTGGGACGATAATGACAAGACGCAGTTGGTGACGGCGATT
ACGAGCAAGCGGCATGTGGATCTGGTGGACATCGTCAGTACGTGGATGTT
GGGGCAGTACGGGTTTTTGAGCCGGGTTTTCAGCATTTTCGAGGAACAGA
AGATTTCGGTGGACTGCGTGGCGACCAGTGAGGTGTCTATTTCTCTTACT
CTAGATGCGAAGAAGCACGATGACGACGCAGAGGGCCGTTTGGTTAAAGC
TTTGAGTGATGTTGCCGCGGTGACCGTGCACCCGAACCGGGCCATTGTCT
CGCTCATTGCTAATGTGGCTAGGTCATCAGAGGTCCTTTCCATTGTGTTC
GATGCCCTCAAAGAGGCTGGAATTCAAGTGGAGATGCTTTCGCAGGGTGC
CAGCAAAGTCAACATCAGCCTCATCGTCAAAGACGAAGATGCAGAGCGTT
GCACCCAGATCCTCCACGATCGATTCTTCTACCCCAATGGTGCGCCTCCG
GTTGAAGCCCAGTGA
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Synonyms
Publications