NO05G02480.1, NO05G02480.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G02480.1
Unique Name	NO05G02480.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3243
Alignment location	chr5:657050..661020 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:657050..661020 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G02480.1 vs.
Match: EWM28124.1 (hypothetical protein Naga_100036g23 [Nannochloropsis gaditana])

HSP 1 Score: 779.6 bits (2012), Expect = 1.200e-221
Identity = 610/1114 (54.76%), Postives = 704/1114 (63.20%), Query Frame = 0

Query:    1 MSRSSEGVKKRGGRGGVTAERGGGGLPSQPSA--VDLKQLMEFAPPGTTKEQVLEMHTKFSDREQLKEEICKLWDAPIANPAEDEWQEIGNKKKKE-IAPVISSRGGRGGRIGHMDTRRGAPTGGTMTSPSFNDNRGAPPQSMGHRSTPSFGVINGSGGRGRSAPPGQRGGGVAGRSSGRGGAIVMVGGPGPTFSSSSTSRSMSVVPSHDGPGLRSSSSNGSAWTP--GGRSAAAVITEGPSPPVEPTFPAPIVEPEVGRSSDGVVE--EAQWDQPVSSSKPVAPALAAPLSSSVAASSSSSSAVSSGAIAPIPTDARISKPVGPGPQP-TAATAMPPPAATGTQQQQSERQSQQQKHQQQPQQPPQHQSQPH--------------QQQQQQPRQLQQQQRQQQKQ-PSQQQPSRPVGPPDGVTLTEADILKMS-----NKNNADKAIGPKVPSTAASPDTQQQQEQQQRRAPIEADRCAAGLKPEIKEGGVDATADSLGRVKLGQWEAISAVGDGGGGNILFGAFGVEESGANKKTATTSAADIWGGKAASTSPVVAGAAK--SVTSSPPDRTLSPKEATVGATAPSAPGSAPPSSSSARPAAPPGLGGPSLVSATSVKSIENAAAQRAAAVSAGG--SVSKPADAVKARPSPHQSPVKTVPGVPQHAMHPHGGHVQHGAAEQLMGAYSGYPPYGNGAYNLGGVGIPGGVVGAVGGVDAGSESAQTGYPGQQQQQPPGVGVSASSGMGASTLSGAPSSTGAGSAGAASYHHQQQSQQQSSVGAPPHLSPAIQQQQQQQQQQQQQTQQQQPSPYGQPPPGMQAYGYGYYQTPYFYPNQAYVAQAAAAGLGGNQFGYGGRGAVGGYGNPGARGGGQGVYGMDQFSAPPSQAASMHYGGGAMDYGAGVGAGAPFNQQDQFIGGGVGQGSHGGAGVGVPGGGGRGGEGKTSTGHTGGHSHAHAHGGVGTGHDHLSGGPHGVVPQGSKAQGGTSGGPPFAGGGGYGANHSVGSHLGGGGGYQGRNAGL-EAGGQGGWAGGGGQYQAPGGAHTWMSHGPPQAASHAMGFNQQSGGMSGSHSHGNPNMM-QQQQQQQQQFQGYARGGAGGMSGGAQNWS 1081
            MSR+ EG KKRGG  G  A RG GG   Q S   +DLKQLMEFAPPGTT +Q+LEM  KF +RE+LKEEICKLWDAP +NP EDEW ++G KKK+  +AP  SSRGGRGGR    D RRGAP G  +      D R A    +G R+ P   ++NG   RGRSAPPG RGG   GR  G G  +VMVGGPGP +S+S  SRS SV P       ++SS NG+A  P  GGR        GPS   E   P    +P  G    G +   EA WDQPVSS     P+ A   SSS AA S +S++  +      PT    ++   PGP   +AA A PPPAATGT     + + +       P  PP  Q++                Q   +QP ++Q  +  ++ Q P   Q +RP GPPDGV L EADILKM+      K++ADKAIGP  P++  + D  Q      RR P   D          +   ++  A+ LGRVKLGQW+A++A GD GG NILFGAFGV++S +NKK+A TS ADIWGGK A TSPVVA +AK  SV +SP    LSPKEA +GA  PSA    P  SSSARP APPGLGGP +V+ATSVK+IE+AA +    V AGG    + P DAVK RP+  QSP+K    VP H+ HPHG     G    L+G   GYPPY NG Y L   G  G  VGA  G D G +SA  GYPGQQ  Q PG G    SG+  S L+  PSSTG+  A  +SYH QQQ+Q QS+ G PPHLS A+QQQ QQQQQ     Q QQP+PYGQPPPGM  YGYGYY  PYFY NQA  A AA   +GG QF YGGRG +GGYGNPGARG   G YGMDQF  P  QA+SMHYGGGAMDY  GVGAGAPFN QDQFI GG GQ SHGGAG         GG  KTS  H   HSH H+H  +G+ HDHLSGGPHG V  G+KAQGG SGGP F GGGGYG N SVGSH+ GGGGYQGRN GL +AG Q GWA  GGQYQAPGGAHTWMSHG PQ  SHAMGF QQ+G M+ SHSHGNPNMM QQQQQQQQQFQGY RGGAGGMS GAQNWS
Sbjct:    1 MSRTLEGGKKRGGGSG-GAGRGSGGRSQQHSGEKLDLKQLMEFAPPGTTPDQILEMSKKFREREKLKEEICKLWDAPASNP-EDEWHDVGRKKKEPMVAP--SSRGGRGGRASPSDARRGAP-GQVL------DARLAGSSGLGARNGP---IVNG---RGRSAPPGHRGGRSGGRGGG-GSGVVMVGGPGPAYSNSE-SRSTSVGP-------KASSGNGTAGPPRTGGRKP------GPSEMAEA--PGDAADPARGTGRPGALPGGEAPWDQPVSSVLSGKPSAAVGPSSSSAAPSPASASTGAAPAPTRPTTTSTARGAKPGPHSASAANATPPPAATGTWAALLKPKPKPPPPPPAPVPPPSKQTRKEVVEPAPVSGPAPTRQGPGEQPPKMQHAKEVKESQAPLHTQQTRPTGPPDGVILKEADILKMNASAGLKKSDADKAIGPNTPASIGATDLPQ------RRVPAAVDAGVGKPARRPEADSLEGAAEGLGRVKLGQWDALNAGGDAGGSNILFGAFGVDDSSSNKKSAATSVADIWGGKPA-TSPVVAASAKPPSVAASPSTSALSPKEAAIGAPVPSAGTHGP--SSSARPPAPPGLGGPPIVNATSVKAIESAAQR----VGAGGPSKPTGPVDAVKGRPA-QQSPIKGGMSVPPHSSHPHG---VSGPHTDLVGGLGGYPPYMNGTYGLAAAG--GPPVGAAVGSDTGLDSASVGYPGQQTAQ-PGAGAGVVSGVRGSPLAAPPSSTGSMPAATSSYHAQQQAQPQSTSGVPPHLSSAMQQQPQQQQQ-----QPQQPAPYGQPPPGMAPYGYGYY-PPYFYQNQA--AYAAQGAVGGGQFAYGGRGGLGGYGNPGARG---GQYGMDQFPGP--QASSMHYGGGAMDY-PGVGAGAPFNPQDQFIAGG-GQ-SHGGAG---------GGGSKTSGSHASSHSHGHSH--IGSAHDHLSGGPHGGVQSGNKAQGGASGGPSF-GGGGYGGNQSVGSHI-GGGGYQGRNPGLDQAGAQSGWA--GGQYQAPGGAHTWMSHG-PQGGSHAMGFGQQAGAMTSSHSHGNPNMMQQQQQQQQQQFQGYGRGGAGGMSSGAQNWS 1028

The following BLAST results are available for this feature:

BLAST of NO05G02480.1 vs.

BLAST of NO05G02480.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28124.1	1.200e-221	54.76	hypothetical protein Naga_100036g23 [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G02480	NO05G02480	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G02480.1	NO05G02480.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G02480.1.cds1	NO05G02480.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G02480.1.cds2	NO05G02480.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G02480.1.cds3	NO05G02480.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G02480.1.cds4	NO05G02480.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:657050..661020-
coding sequence from alignment at chr5:657050..661020-

mRNA sequence

>NO05G02480.1 ID=NO05G02480.1|Name=NO05G02480.1|organism=Nannochloropsis oceanica|type=mRNA|length=3243bp
ATGTCCCGGAGTAGTGAAGGCGTGAAAAAGCGCGGCGGCCGCGGCGGTGT
CACTGCAGAAAGGGGCGGTGGCGGTCTACCTTCGCAGCCTTCCGCCGTGG
ACCTTAAGCAGCTGATGGAGTTTGCGCCGCCCGGTACGACCAAAGAACAG
GTGCTGGAGATGCACACAAAGTTTAGCGACCGGGAGCAGCTGAAGGAGGA
AATTTGCAAGCTGTGGGATGCTCCGATAGCCAACCCGGCGGAAGATGAAT
GGCAAGAGATTGGAAACAAGAAGAAGAAGGAAATTGCTCCCGTAATCAGC
TCGCGCGGCGGTCGCGGGGGACGCATCGGACACATGGACACCAGACGAGG
TGCTCCCACTGGAGGCACCATGACCTCCCCTTCCTTCAACGACAACAGAG
GCGCCCCTCCTCAGAGTATGGGCCATCGCAGCACTCCTTCCTTTGGAGTC
ATAAACGGCAGCGGTGGACGAGGTCGAAGTGCTCCTCCGGGCCAGCGAGG
TGGAGGGGTGGCGGGGCGGAGCAGCGGCCGTGGAGGTGCCATCGTGATGG
TTGGAGGGCCTGGGCCAACATTCAGCAGTAGCAGCACCAGCAGGTCCATG
TCTGTGGTACCTTCACACGACGGGCCGGGTCTCAGGTCGAGCTCCAGTAA
TGGATCTGCCTGGACGCCGGGGGGGCGAAGCGCTGCCGCGGTGATCACGG
AGGGGCCTTCCCCTCCTGTCGAGCCGACCTTCCCCGCGCCCATCGTCGAA
CCTGAGGTGGGACGCAGCAGTGACGGAGTGGTGGAAGAGGCTCAATGGGA
CCAACCCGTATCCAGCAGCAAGCCGGTAGCTCCCGCGTTGGCCGCCCCCC
TGTCTTCTTCCGTTGCCGCCTCCTCGTCATCTTCGTCCGCGGTCTCATCG
GGTGCTATTGCTCCAATACCTACCGATGCACGGATCTCGAAGCCCGTCGG
CCCTGGTCCCCAACCTACTGCTGCAACTGCCATGCCACCGCCCGCCGCCA
CGGGCACACAGCAACAACAATCAGAGCGGCAATCACAACAACAAAAACAT
CAACAACAACCACAACAACCACCACAACATCAATCACAACCACACCAACA
ACAACAACAACAACCACGACAGCTACAGCAGCAACAACGGCAACAACAAA
AACAACCGTCGCAGCAGCAGCCGTCACGGCCTGTGGGGCCTCCTGATGGG
GTCACCCTCACCGAGGCGGACATCCTGAAGATGAGCAACAAAAATAACGC
CGATAAGGCCATCGGCCCCAAGGTTCCTTCCACTGCCGCCTCGCCAGACA
CTCAGCAACAGCAGGAGCAACAGCAGCGGCGGGCTCCGATTGAAGCTGAC
AGATGTGCTGCTGGTCTCAAGCCGGAGATTAAGGAAGGAGGTGTGGATGC
GACTGCCGACAGCTTGGGTCGTGTTAAGCTGGGACAGTGGGAAGCGATCA
GCGCCGTTGGTGATGGTGGAGGTGGCAACATACTTTTCGGCGCCTTTGGG
GTCGAGGAGTCAGGGGCTAATAAGAAGACGGCCACAACATCTGCAGCTGA
TATCTGGGGAGGCAAAGCCGCAAGCACCTCTCCTGTTGTGGCTGGTGCGG
CAAAGTCTGTCACGTCTTCCCCGCCAGACAGAACTCTATCGCCCAAGGAA
GCGACTGTCGGTGCCACTGCTCCTTCGGCTCCCGGTTCTGCTCCTCCTTC
CTCGTCCTCCGCGCGACCCGCTGCTCCTCCTGGGTTGGGGGGTCCCTCCC
TGGTGAGTGCCACGTCAGTCAAGTCCATCGAGAACGCGGCAGCTCAACGC
GCGGCTGCTGTTAGTGCTGGTGGCTCGGTATCGAAGCCCGCGGATGCAGT
CAAGGCTCGCCCTTCCCCGCACCAGTCTCCTGTGAAGACAGTACCGGGCG
TGCCGCAACACGCAATGCACCCCCACGGAGGGCATGTGCAGCATGGGGCA
GCGGAGCAGCTGATGGGGGCCTACAGTGGATATCCTCCGTACGGAAATGG
AGCATATAACCTCGGAGGCGTTGGAATACCCGGCGGGGTTGTCGGCGCTG
TAGGAGGGGTAGACGCCGGGTCAGAGAGTGCCCAGACGGGGTACCCTGGC
CAGCAGCAACAGCAGCCACCAGGGGTTGGAGTAAGTGCTTCCAGCGGGAT
GGGCGCATCGACTCTCAGTGGCGCCCCTTCTAGCACAGGCGCTGGCTCTG
CTGGTGCCGCGTCGTACCACCACCAACAACAGTCACAGCAGCAGTCGAGC
GTAGGAGCACCCCCGCACTTGTCACCCGCCATTCAGCAGCAACAGCAGCA
GCAGCAGCAACAACAGCAACAAACCCAACAGCAGCAGCCTTCCCCTTACG
GGCAGCCGCCTCCTGGTATGCAAGCGTATGGGTATGGCTACTATCAAACT
CCATACTTTTACCCCAACCAAGCATATGTTGCTCAGGCTGCGGCTGCTGG
TCTGGGTGGGAATCAATTTGGGTACGGTGGCCGAGGTGCCGTGGGAGGGT
ATGGAAACCCCGGAGCACGTGGAGGGGGGCAGGGTGTTTATGGGATGGAT
CAATTTTCGGCCCCGCCTTCCCAGGCGGCGTCGATGCATTATGGAGGAGG
GGCGATGGACTACGGGGCAGGTGTTGGAGCGGGTGCGCCATTCAACCAAC
AAGACCAATTTATCGGTGGAGGAGTAGGACAAGGGAGTCACGGTGGGGCT
GGAGTAGGGGTACCAGGGGGGGGTGGACGTGGGGGGGAGGGCAAGACGAG
TACCGGGCATACAGGGGGGCATTCGCATGCGCACGCTCACGGAGGGGTGG
GCACGGGGCATGACCACCTGTCCGGGGGGCCGCATGGCGTGGTGCCGCAG
GGGAGCAAGGCTCAGGGAGGGACGTCGGGGGGTCCTCCTTTCGCGGGAGG
TGGCGGATATGGTGCGAACCATTCGGTTGGGTCGCATTTGGGCGGTGGTG
GAGGGTACCAAGGACGGAATGCTGGACTGGAGGCGGGTGGGCAAGGTGGG
TGGGCGGGAGGAGGGGGGCAGTACCAGGCTCCCGGGGGGGCGCATACCTG
GATGTCGCACGGTCCGCCCCAGGCGGCAAGTCATGCTATGGGCTTTAATC
AACAGTCGGGGGGGATGTCCGGTTCACACTCGCATGGGAATCCGAATATG
ATGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTTCAGGGGTATGCTCGTGG
AGGGGCGGGAGGCATGAGCGGTGGGGCCCAGAACTGGAGTTAA

protein sequence of NO05G02480.1

>NO05G02480.1-protein ID=NO05G02480.1-protein|Name=NO05G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1081bp
MSRSSEGVKKRGGRGGVTAERGGGGLPSQPSAVDLKQLMEFAPPGTTKEQ
VLEMHTKFSDREQLKEEICKLWDAPIANPAEDEWQEIGNKKKKEIAPVIS
SRGGRGGRIGHMDTRRGAPTGGTMTSPSFNDNRGAPPQSMGHRSTPSFGV
INGSGGRGRSAPPGQRGGGVAGRSSGRGGAIVMVGGPGPTFSSSSTSRSM
SVVPSHDGPGLRSSSSNGSAWTPGGRSAAAVITEGPSPPVEPTFPAPIVE
PEVGRSSDGVVEEAQWDQPVSSSKPVAPALAAPLSSSVAASSSSSSAVSS
GAIAPIPTDARISKPVGPGPQPTAATAMPPPAATGTQQQQSERQSQQQKH
QQQPQQPPQHQSQPHQQQQQQPRQLQQQQRQQQKQPSQQQPSRPVGPPDG
VTLTEADILKMSNKNNADKAIGPKVPSTAASPDTQQQQEQQQRRAPIEAD
RCAAGLKPEIKEGGVDATADSLGRVKLGQWEAISAVGDGGGGNILFGAFG
VEESGANKKTATTSAADIWGGKAASTSPVVAGAAKSVTSSPPDRTLSPKE
ATVGATAPSAPGSAPPSSSSARPAAPPGLGGPSLVSATSVKSIENAAAQR
AAAVSAGGSVSKPADAVKARPSPHQSPVKTVPGVPQHAMHPHGGHVQHGA
AEQLMGAYSGYPPYGNGAYNLGGVGIPGGVVGAVGGVDAGSESAQTGYPG
QQQQQPPGVGVSASSGMGASTLSGAPSSTGAGSAGAASYHHQQQSQQQSS
VGAPPHLSPAIQQQQQQQQQQQQQTQQQQPSPYGQPPPGMQAYGYGYYQT
PYFYPNQAYVAQAAAAGLGGNQFGYGGRGAVGGYGNPGARGGGQGVYGMD
QFSAPPSQAASMHYGGGAMDYGAGVGAGAPFNQQDQFIGGGVGQGSHGGA
GVGVPGGGGRGGEGKTSTGHTGGHSHAHAHGGVGTGHDHLSGGPHGVVPQ
GSKAQGGTSGGPPFAGGGGYGANHSVGSHLGGGGGYQGRNAGLEAGGQGG
WAGGGGQYQAPGGAHTWMSHGPPQAASHAMGFNQQSGGMSGSHSHGNPNM
MQQQQQQQQQFQGYARGGAGGMSGGAQNWS*

mRNA from alignment at chr5:657050..661020-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G02480.1 ID=NO05G02480.1|Name=NO05G02480.1|organism=Nannochloropsis oceanica|type=mRNA|length=3971bp|location=Sequence derived from alignment at chr5:657050..661020- (Nannochloropsis oceanica)
ATGTCCCGGAGTAGTGAAGGCGTGAAAAAGCGCGGCGGCCGCGGCGGTGT
CACTGCAGAAAGGGGCGGTGGCGGTCTACCTTCGCAGCCTTCCGCCGTGG
ACCTTAAGCAGGTACGTCTTTAATGGAGGCGAGACAAGGTAGAACTTAGT
GGTGGGCTTCCGTACTGCGTTTCCCTCGTCCCTCTTCCTTGCTTACTTCT
GACCTTTCCATGCATACACTCCAAACGGCATGACTCAATTACCGTGCAGC
TGATGGAGTTTGCGCCGCCCGGTACGACCAAAGAACAGGTGCTGGAGATG
CACACAAAGTTTAGCGACCGGGAGCAGCTGAAGGAGGAAATTTGCAAGCT
GTGGGATGGTACGTACTTTTGTTGTCGGGACTTGTCCTTTAGCGAGAAGA
TGACTGTTTTTCCACAGACATGATTCGAAAGAGGAGGATATCTGAATCCT
GCTGTATAAGTGAAAAAGCAGGAGGAGAGGAGGTGGTGGCGGAGGCGGAG
GAGGAGGAGGAGGAGGAGGAAGAGGAGGAAAAATTGTTGGATTGATGACG
ATTTTCACACAAAGTCTCTTGACTTTTCCCGTTTGCGGAAAGCCTGGGGG
TTAACTTCATACTCTAATTTTTAACTGATACACAACACATAAATCCGTCT
TTGGAGGACTGCCTTTCGCCTGTTGGAACTCCAATTCTTACTCGTGTGAA
TCAATTGTGACTTTCCCCTCGTGTCTTCCTATCTCTTATCTGGCATTCCA
ACACACGCTCCCACAGCTCCGATAGCCAACCCGGCGGAAGATGAATGGCA
AGAGATTGGAAACAAGAAGAAGAAGGAAATTGCTCCCGTAATCAGCTCGC
GCGGCGGTCGCGGGGGACGCATCGGACACATGGACACCAGACGAGGTGCT
CCCACTGGAGGCACCATGACCTCCCCTTCCTTCAACGACAACAGAGGCGC
CCCTCCTCAGAGTATGGGCCATCGCAGCACTCCTTCCTTTGGAGTCATAA
ACGGCAGCGGTGGACGAGGTCGAAGTGCTCCTCCGGGCCAGCGAGGTGGA
GGGGTGGCGGGGCGGAGCAGCGGCCGTGGAGGTGCCATCGTGATGGTTGG
AGGGCCTGGGCCAACATTCAGCAGTAGCAGCACCAGCAGGTCCATGTCTG
TGGTACCTTCACACGACGGGCCGGGTCTCAGGTCGAGCTCCAGTAATGGA
TCTGCCTGGACGCCGGGGGGGCGAAGCGCTGCCGCGGTGATCACGGAGGG
GCCTTCCCCTCCTGTCGAGCCGACCTTCCCCGCGCCCATCGTCGAACCTG
AGGTGGGACGCAGCAGTGACGGAGTGGTGGAAGAGGCTCAATGGGACCAA
CCCGTATCCAGCAGCAAGCCGGTAGCTCCCGCGTTGGCCGCCCCCCTGTC
TTCTTCCGTTGCCGCCTCCTCGTCATCTTCGTCCGCGGTCTCATCGGGTG
CTATTGCTCCAATACCTACCGATGCACGGATCTCGAAGCCCGTCGGCCCT
GGTCCCCAACCTACTGCTGCAACTGCCATGCCACCGCCCGCCGCCACGGG
CACGTGGGCTGCTTTGCTTAAGCCAAAACCAAAGCTTCCCCCTCCACCGC
CTGCCCCTGTCCCCCCCCCCCCCCCAAGGCACAGGCGCCCCAAATTGTCC
CGAAGTCCGCCGCCGCTGCGTCCCCCGCCACAATTACCACTCTCCCGCCG
GATCGACAACAATCACATCAAACACAACAACAAAGACAGCAACAACAATC
AGAGCGGCAATCACAACAACAAAAACATCAACAACAACCACAACAACCAC
CACAACATCAATCACAACCACACCAACAACAACAACAACAACCACGACAG
CTACAGCAGCAACAACGGCAACAACAAAAACAACCGTCGCAGCAGCAGCC
GTCACGGCCTGTGGGGCCTCCTGATGGGGTCACCCTCACCGAGGCGGACA
TCCTGAAGATGAGCAACAAAAATAACGCCGATAAGGCCATCGGCCCCAAG
GTTCCTTCCACTGCCGCCTCGCCAGACACTCAGCAACAGCAGGAGCAACA
GCAGCGGCGGGCTCCGATTGAAGCTGACAGATGTGCTGCTGGTCTCAAGC
CGGAGATTAAGGAAGGAGGTGTGGATGCGACTGCCGACAGCTTGGGTCGT
GTTAAGCTGGGACAGTGGGAAGCGATCAGCGCCGTTGGTGATGGTGGAGG
TGGCAACATACTTTTCGGCGCCTTTGGGGTCGAGGAGTCAGGGGCTAATA
AGAAGACGGCCACAACATCTGCAGCTGATATCTGGGGAGGCAAAGCCGCA
AGCACCTCTCCTGTTGTGGCTGGTGCGGCAAAGTCTGTCACGTCTTCCCC
GCCAGACAGAACTCTATCGCCCAAGGAAGCGACTGTCGGTGCCACTGCTC
CTTCGGCTCCCGGTTCTGCTCCTCCTTCCTCGTCCTCCGCGCGACCCGCT
GCTCCTCCTGGGTTGGGGGGTCCCTCCCTGGTGAGTGCCACGTCAGTCAA
GTCCATCGAGAACGCGGCAGCTCAACGCGCGGCTGCTGTTAGTGCTGGTG
GCTCGGTATCGAAGCCCGCGGATGCAGTCAAGGCTCGCCCTTCCCCGCAC
CAGTCTCCTGTGAAGACAGTACCGGGCGTGCCGCAACACGCAATGCACCC
CCACGGAGGGCATGTGCAGCATGGGGCAGCGGAGCAGCTGATGGGGGCCT
ACAGTGGATATCCTCCGTACGGAAATGGAGCATATAACCTCGGAGGCGTT
GGAATACCCGGCGGGGTTGTCGGCGCTGTAGGAGGGGTAGACGCCGGGTC
AGAGAGTGCCCAGACGGGGTACCCTGGCCAGCAGCAACAGCAGCCACCAG
GGGTTGGAGTAAGTGCTTCCAGCGGGATGGGCGCATCGACTCTCAGTGGC
GCCCCTTCTAGCACAGGCGCTGGCTCTGCTGGTGCCGCGTCGTACCACCA
CCAACAACAGTCACAGCAGCAGTCGAGCGTAGGAGCACCCCCGCACTTGT
CACCCGCCATTCAGCAGCAACAGCAGCAGCAGCAGCAACAACAGCAACAA
ACCCAACAGCAGCAGCCTTCCCCTTACGGGCAGCCGCCTCCTGGTATGCA
AGCGTATGGGTATGGCTACTATCAAACTCCATACTTTTACCCCAACCAAG
CATATGTTGCTCAGGCTGCGGCTGCTGGTCTGGGTGGGAATCAATTTGGG
TACGGTGGCCGAGGTGCCGTGGGAGGGTATGGAAACCCCGGAGCACGTGG
AGGGGGGCAGGGTGTTTATGGGATGGATCAATTTTCGGCCCCGCCTTCCC
AGGCGGCGTCGATGCATTATGGAGGAGGGGCGATGGACTACGGGGCAGGT
GTTGGAGCGGGTGCGCCATTCAACCAACAAGACCAATTTATCGGTGGAGG
AGTAGGACAAGGGAGTCACGGTGGGGCTGGAGTAGGGGTACCAGGGGGGG
GTGGACGTGGGGGGGAGGGCAAGACGAGTACCGGGCATACAGGGGGGCAT
TCGCATGCGCACGCTCACGGAGGGGTGGGCACGGGGCATGACCACCTGTC
CGGGGGGCCGCATGGCGTGGTGCCGCAGGGGAGCAAGGCTCAGGGAGGGA
CGTCGGGGGGTCCTCCTTTCGCGGGAGGTGGCGGATATGGTGCGAACCAT
TCGGTTGGGTCGCATTTGGGCGGTGGTGGAGGGTACCAAGGACGGAATGC
TGGACTGGAGGCGGGTGGGCAAGGTGGGTGGGCGGGAGGAGGGGGGCAGT
ACCAGGCTCCCGGGGGGGCGCATACCTGGATGTCGCACGGTCCGCCCCAG
GCGGCAAGTCATGCTATGGGCTTTAATCAACAGTCGGGGGGGATGTCCGG
TTCACACTCGCATGGGAATCCGAATATGATGCAGCAGCAGCAGCAGCAGC
AGCAGCAGTTTCAGGGGTATGCTCGTGGAGGGGCGGGAGGCATGAGCGGT
GGGGCCCAGAACTGGAGTTAA

Coding sequence (CDS) from alignment at chr5:657050..661020-

>NO05G02480.1 ID=NO05G02480.1|Name=NO05G02480.1|organism=Nannochloropsis oceanica|type=CDS|length=3243bp|location=Sequence derived from alignment at chr5:657050..661020- (Nannochloropsis oceanica)
ATGTCCCGGAGTAGTGAAGGCGTGAAAAAGCGCGGCGGCCGCGGCGGTGT
CACTGCAGAAAGGGGCGGTGGCGGTCTACCTTCGCAGCCTTCCGCCGTGG
ACCTTAAGCAGCTGATGGAGTTTGCGCCGCCCGGTACGACCAAAGAACAG
GTGCTGGAGATGCACACAAAGTTTAGCGACCGGGAGCAGCTGAAGGAGGA
AATTTGCAAGCTGTGGGATGCTCCGATAGCCAACCCGGCGGAAGATGAAT
GGCAAGAGATTGGAAACAAGAAGAAGAAGGAAATTGCTCCCGTAATCAGC
TCGCGCGGCGGTCGCGGGGGACGCATCGGACACATGGACACCAGACGAGG
TGCTCCCACTGGAGGCACCATGACCTCCCCTTCCTTCAACGACAACAGAG
GCGCCCCTCCTCAGAGTATGGGCCATCGCAGCACTCCTTCCTTTGGAGTC
ATAAACGGCAGCGGTGGACGAGGTCGAAGTGCTCCTCCGGGCCAGCGAGG
TGGAGGGGTGGCGGGGCGGAGCAGCGGCCGTGGAGGTGCCATCGTGATGG
TTGGAGGGCCTGGGCCAACATTCAGCAGTAGCAGCACCAGCAGGTCCATG
TCTGTGGTACCTTCACACGACGGGCCGGGTCTCAGGTCGAGCTCCAGTAA
TGGATCTGCCTGGACGCCGGGGGGGCGAAGCGCTGCCGCGGTGATCACGG
AGGGGCCTTCCCCTCCTGTCGAGCCGACCTTCCCCGCGCCCATCGTCGAA
CCTGAGGTGGGACGCAGCAGTGACGGAGTGGTGGAAGAGGCTCAATGGGA
CCAACCCGTATCCAGCAGCAAGCCGGTAGCTCCCGCGTTGGCCGCCCCCC
TGTCTTCTTCCGTTGCCGCCTCCTCGTCATCTTCGTCCGCGGTCTCATCG
GGTGCTATTGCTCCAATACCTACCGATGCACGGATCTCGAAGCCCGTCGG
CCCTGGTCCCCAACCTACTGCTGCAACTGCCATGCCACCGCCCGCCGCCA
CGGGCACACAGCAACAACAATCAGAGCGGCAATCACAACAACAAAAACAT
CAACAACAACCACAACAACCACCACAACATCAATCACAACCACACCAACA
ACAACAACAACAACCACGACAGCTACAGCAGCAACAACGGCAACAACAAA
AACAACCGTCGCAGCAGCAGCCGTCACGGCCTGTGGGGCCTCCTGATGGG
GTCACCCTCACCGAGGCGGACATCCTGAAGATGAGCAACAAAAATAACGC
CGATAAGGCCATCGGCCCCAAGGTTCCTTCCACTGCCGCCTCGCCAGACA
CTCAGCAACAGCAGGAGCAACAGCAGCGGCGGGCTCCGATTGAAGCTGAC
AGATGTGCTGCTGGTCTCAAGCCGGAGATTAAGGAAGGAGGTGTGGATGC
GACTGCCGACAGCTTGGGTCGTGTTAAGCTGGGACAGTGGGAAGCGATCA
GCGCCGTTGGTGATGGTGGAGGTGGCAACATACTTTTCGGCGCCTTTGGG
GTCGAGGAGTCAGGGGCTAATAAGAAGACGGCCACAACATCTGCAGCTGA
TATCTGGGGAGGCAAAGCCGCAAGCACCTCTCCTGTTGTGGCTGGTGCGG
CAAAGTCTGTCACGTCTTCCCCGCCAGACAGAACTCTATCGCCCAAGGAA
GCGACTGTCGGTGCCACTGCTCCTTCGGCTCCCGGTTCTGCTCCTCCTTC
CTCGTCCTCCGCGCGACCCGCTGCTCCTCCTGGGTTGGGGGGTCCCTCCC
TGGTGAGTGCCACGTCAGTCAAGTCCATCGAGAACGCGGCAGCTCAACGC
GCGGCTGCTGTTAGTGCTGGTGGCTCGGTATCGAAGCCCGCGGATGCAGT
CAAGGCTCGCCCTTCCCCGCACCAGTCTCCTGTGAAGACAGTACCGGGCG
TGCCGCAACACGCAATGCACCCCCACGGAGGGCATGTGCAGCATGGGGCA
GCGGAGCAGCTGATGGGGGCCTACAGTGGATATCCTCCGTACGGAAATGG
AGCATATAACCTCGGAGGCGTTGGAATACCCGGCGGGGTTGTCGGCGCTG
TAGGAGGGGTAGACGCCGGGTCAGAGAGTGCCCAGACGGGGTACCCTGGC
CAGCAGCAACAGCAGCCACCAGGGGTTGGAGTAAGTGCTTCCAGCGGGAT
GGGCGCATCGACTCTCAGTGGCGCCCCTTCTAGCACAGGCGCTGGCTCTG
CTGGTGCCGCGTCGTACCACCACCAACAACAGTCACAGCAGCAGTCGAGC
GTAGGAGCACCCCCGCACTTGTCACCCGCCATTCAGCAGCAACAGCAGCA
GCAGCAGCAACAACAGCAACAAACCCAACAGCAGCAGCCTTCCCCTTACG
GGCAGCCGCCTCCTGGTATGCAAGCGTATGGGTATGGCTACTATCAAACT
CCATACTTTTACCCCAACCAAGCATATGTTGCTCAGGCTGCGGCTGCTGG
TCTGGGTGGGAATCAATTTGGGTACGGTGGCCGAGGTGCCGTGGGAGGGT
ATGGAAACCCCGGAGCACGTGGAGGGGGGCAGGGTGTTTATGGGATGGAT
CAATTTTCGGCCCCGCCTTCCCAGGCGGCGTCGATGCATTATGGAGGAGG
GGCGATGGACTACGGGGCAGGTGTTGGAGCGGGTGCGCCATTCAACCAAC
AAGACCAATTTATCGGTGGAGGAGTAGGACAAGGGAGTCACGGTGGGGCT
GGAGTAGGGGTACCAGGGGGGGGTGGACGTGGGGGGGAGGGCAAGACGAG
TACCGGGCATACAGGGGGGCATTCGCATGCGCACGCTCACGGAGGGGTGG
GCACGGGGCATGACCACCTGTCCGGGGGGCCGCATGGCGTGGTGCCGCAG
GGGAGCAAGGCTCAGGGAGGGACGTCGGGGGGTCCTCCTTTCGCGGGAGG
TGGCGGATATGGTGCGAACCATTCGGTTGGGTCGCATTTGGGCGGTGGTG
GAGGGTACCAAGGACGGAATGCTGGACTGGAGGCGGGTGGGCAAGGTGGG
TGGGCGGGAGGAGGGGGGCAGTACCAGGCTCCCGGGGGGGCGCATACCTG
GATGTCGCACGGTCCGCCCCAGGCGGCAAGTCATGCTATGGGCTTTAATC
AACAGTCGGGGGGGATGTCCGGTTCACACTCGCATGGGAATCCGAATATG
ATGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTTCAGGGGTATGCTCGTGG
AGGGGCGGGAGGCATGAGCGGTGGGGCCCAGAACTGGAGTTAA

Synonyms

Publications