NO05G02110.1, NO05G02110.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G02110.1
Unique NameNO05G02110.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length378
Alignment locationchr5:568368..569107 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:568368..569107 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G02110.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02110NO05G02110Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G02110.1NO05G02110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G02110.1.cds1NO05G02110.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02110.1.cds2NO05G02110.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02110.1.cds3NO05G02110.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G02110.1 ID=NO05G02110.1|Name=NO05G02110.1|organism=Nannochloropsis oceanica|type=mRNA|length=378bp
ATGTTGGACAACAGCTCCTACACTACCATGATGGTAGAATGCCAGCTGAT
TCCCCCGCGCGTCGGCCTGGAGGTGAATGACAGTATCGTGGCCACACCAA
AGGGACAGGAGGGCGCCGAGGCAGGCACAAAGGTACACCTCGATTGTGGG
CAGCGTCTAAACCCAATTGCGAGAATGGCAGAAGGAGAAGGAGGAGAAGG
AGGTGGAGAAGGAGGAGAAGGAGGTGGAGAAGGAGAAGGAGGAGGTGGAG
GAGGAGGAGGAGGAGGGGGAGAAGGGGGAGGAGGCGGAGGAGGAGAAGAA
GAGGAGGAAGAAGAAGACGAACAAGAAGAAGAAGGAGGAGAGGAAGAGGT
AAAAGAGGAAGAAGAGGAAGAAGAATAA
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protein sequence of NO05G02110.1

>NO05G02110.1-protein ID=NO05G02110.1-protein|Name=NO05G02110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=126bp
MLDNSSYTTMMVECQLIPPRVGLEVNDSIVATPKGQEGAEAGTKVHLDCG
QRLNPIARMAEGEGGEGGGEGGEGGGEGEGGGGGGGGGGGEGGGGGGGEE
EEEEEDEQEEEGGEEEVKEEEEEEE*
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mRNA from alignment at chr5:568368..569107-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G02110.1 ID=NO05G02110.1|Name=NO05G02110.1|organism=Nannochloropsis oceanica|type=mRNA|length=740bp|location=Sequence derived from alignment at chr5:568368..569107- (Nannochloropsis oceanica)
ATGTTGGACAACAGCTCCTACACTACCATGATGGTAGAATGCCAGGTGCA
GTAGAATGTTTTCCCCTCCTCCCAAGAACCGAGGCAAGCGTGCGTGGCAC
GCGGCTGTTTTGTTTACTGCCGCCGCACCCACCTATCCCCCCCCCCCCTC
CGTCCGTTCCCTCCTTCCTACCCACCCATGCGCCATACACCACACACCCA
CAGCTGATTCCCCCGCGCGTCGGCCTGGAGGTGAATGACAGTATCGTGGC
CACACCAAAGGGACAGGAGGGCGCCGAGGCAGGCGTGCGTGGCACGTAGC
TGTTTTGTTTACTGCCGCCGCACCCACCTATCCCCCCCCCCCTCCGTTCC
CTCCTTCCTACCCACCCATTCACCGCGACTACAACTTACATTTTGCCATT
ATGCCAAGGACAACACCACACCCTCCATTAGAGCCGTCACACTTCCTCTC
TATTTCCCCCCCTCCCCCCCCCCCTCCTCAAACCACAGACAAAGGTACAC
CTCGATTGTGGGCAGCGTCTAAACCCAATTGCGAGAATGGCAGAAGGAGA
AGGAGGAGAAGGAGGTGGAGAAGGAGGAGAAGGAGGTGGAGAAGGAGAAG
GAGGAGGTGGAGGAGGAGGAGGAGGAGGGGGAGAAGGGGGAGGAGGCGGA
GGAGGAGAAGAAGAGGAGGAAGAAGAAGACGAACAAGAAGAAGAAGGAGG
AGAGGAAGAGGTAAAAGAGGAAGAAGAGGAAGAAGAATAA
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Coding sequence (CDS) from alignment at chr5:568368..569107-

>NO05G02110.1 ID=NO05G02110.1|Name=NO05G02110.1|organism=Nannochloropsis oceanica|type=CDS|length=378bp|location=Sequence derived from alignment at chr5:568368..569107- (Nannochloropsis oceanica)
ATGTTGGACAACAGCTCCTACACTACCATGATGGTAGAATGCCAGCTGAT
TCCCCCGCGCGTCGGCCTGGAGGTGAATGACAGTATCGTGGCCACACCAA
AGGGACAGGAGGGCGCCGAGGCAGGCACAAAGGTACACCTCGATTGTGGG
CAGCGTCTAAACCCAATTGCGAGAATGGCAGAAGGAGAAGGAGGAGAAGG
AGGTGGAGAAGGAGGAGAAGGAGGTGGAGAAGGAGAAGGAGGAGGTGGAG
GAGGAGGAGGAGGAGGGGGAGAAGGGGGAGGAGGCGGAGGAGGAGAAGAA
GAGGAGGAAGAAGAAGACGAACAAGAAGAAGAAGGAGGAGAGGAAGAGGT
AAAAGAGGAAGAAGAGGAAGAAGAATAA
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Synonyms
Publications