NO05G01690.1, NO05G01690.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G01690.1
Unique Name	NO05G01690.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4453
Alignment location	chr5:461600..466946 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:461600..466946 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G01690.1 vs.
Match: EWM28190.1 (dna helicase [Nannochloropsis gaditana])

HSP 1 Score: 730.3 bits (1884), Expect = 5.400e-207
Identity = 366/532 (68.80%), Postives = 423/532 (79.51%), Query Frame = 0

Query:   76 PWASTETCSNHDQPITNFYGRRRSSVSSTIYSGNGGRYDEEKKEDCFGGNACMQPTPDRTVDDRLRQINLANKEVFGNPSFRVDQERIILAALQKKDVFVLMPTGGGKSLCYQLPAIVTRGVTLVVSPLISLIQDQVSALVKQHRIPAAILNSTTSESIAKGIYRDLHAVDRGREPQIKLLYVTPERLLKSVAFQELLTKLDDHGMLARFVVDEAHCVSQWGHDFRPDFYRLGEFRNAYPDVPIMALTATATDEVLQDVYRVLDLHHQGRKKCLLFKQPPLRPNLFFEIRGKEKDKENAKQDVLELLQDPASGCGRGTGIVYCMTQKDTEALADFLCDAGQSADHYHAGMTDRERTAVLAAWSAGQLRVICATIAFGMGIDKKAVRFIIHTTLAKSLEGYFQEVGRAGRDGLPARCILFYRKEDVGKLKNLITVPFGGRGRGRAGGRKRKVGDVEKLMMMKEYCEERRFCRRAMLGQHFGHTERVDCGEGCDNCQMEGRREEGREGRRGGFVGDDDDVSYVRWANTFRREQG 608
            PWA+ ET   + QPIT+++  R+   SST       RYD  +++D    NAC+QP+P RT D+R  QI+ ANK VF NPSFR DQERII AALQK+DVFV+MPTGGGKSLCYQLPAIVTRGVTLVV+PLISLIQDQVSAL+KQHRIPAA+LNSTT E++A+GIYRDL +V  GREP IKLLYVTPERLL    F++L+  L++HGMLAR VVDEAHCVSQWGHDFRPDFYRLGEFR  +P +PIMALTATAT+EVL DVY+ L L + G + CL   QPPLRPNLFFEIR KE+DKENA+QDVLELL+D  SGC RGTGIVYCMTQ DTEALADFL D G+SADHYHAGM+D ER AVLAAWSAGQ+R+ICATIAFGMGIDKK VRF++HT++AKSLEGYFQEVGRAGRDGLPARC+LFYRK DVGKLK LI  PFGGRG+G+    KRK  D+EKL  M+++CEERR CRR MLG+HFG+ E V C  GCDNCQ E                +  +VS++RWA  FR  QG
Sbjct:    2 PWAN-ETSQLY-QPITSYFAGRQDRESSTSTGRYARRYDYMQEQDA--ANACLQPSPPRTRDERGAQIHFANKNVFKNPSFRADQERIIQAALQKRDVFVIMPTGGGKSLCYQLPAIVTRGVTLVVAPLISLIQDQVSALIKQHRIPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLNEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATEEVLLDVYKALGLRNTGPRACLRLVQPPLRPNLFFEIRPKERDKENARQDVLELLRDQTSGCRRGTGIVYCMTQNDTEALADFLMDNGESADHYHAGMSDNERAAVLAAWSAGQVRIICATIAFGMGIDKKEVRFVVHTSIAKSLEGYFQEVGRAGRDGLPARCVLFYRKADVGKLKTLIMGPFGGRGKGK----KRKARDLEKLRTMQDFCEERRECRRVMLGEHFGYKEAVRCEAGCDNCQRES--------------AEYPEVSFLRWAQPFREGQG 511

The following BLAST results are available for this feature:

BLAST of NO05G01690.1 vs.

BLAST of NO05G01690.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28190.1	5.400e-207	68.80	dna helicase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G01690	NO05G01690	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G01690.1	NO05G01690.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G01690.1.cds1	NO05G01690.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G01690.1.cds2	NO05G01690.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G01690.1.cds3	NO05G01690.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G01690.1.cds4	NO05G01690.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G01690.1.cds5	NO05G01690.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G01690.1.cds6	NO05G01690.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G01690.1.cds7	NO05G01690.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:461600..466946-
coding sequence from alignment at chr5:461600..466946-

mRNA sequence

>NO05G01690.1 ID=NO05G01690.1|Name=NO05G01690.1|organism=Nannochloropsis oceanica|type=mRNA|length=4453bp
GCTTCGAACCCTTTCCTCGTCTTATACTTTGCCTTTTACATCTTTATGAA
GCTTGCACGGGCCGTGCGGTAGCTAGAAAAGAGATCATTTATCCCATCGT
GCAGATTCTTCTTCGCCTTCGCCTTCTTCTTCTTCACCTCTATCACCTTC
TTCTTCCTCTTTTTCGTTCTTTCTTTGTATAATGCTTTTAAACAGTGGAA
GCCTTCGCGGCCGTACGCTTAGTGTTTACCACTTGCAGCCCATATCTAAC
AGGTTAAATTTTGTCTAAGAAAATAAAGGGTTGTGCCCTTGACATAGAGG
TCTATTTCTCGTCCCCTTCCCTTTCTCCCTCCTTCCCAGCCTCCTCGTCA
TGTTCGAAGAATTACTTGTCTCGCCACTTTTATCTTATGAAATTGCCATG
ATGAAATATTATAAAATGTATTGTTTTGTCGGACACTCTGTCAAGATCGG
TCGACATAAATCTAAGGAAAACGTACATACACACACTACGCAGCTTCACT
CCCCCTCTCCGACTCGCCCTCCCTCCTCCCTGACACCTCATTCATCGGGG
CATCTCCTCCATTCGGGTGTGATGGTCCTTCTCCTCCTCCAACCATGTCA
ATCCATACCCCTTATCCCCCAGCCTCATCGCCATCACGGACGACCCCGCC
GGGGGAGGCTTCATTGGCAACCGGCACTGCTCGTGACTCTCATCATCCTC
CCCTGCCCTCATCCCTTCCGCCGCACCTGCCTGCTGCTCTTGCATCTGGT
GAATCATTTCCAATATTCGGCTTCGAGGATCAAGGATCAGGGCTTTTTCG
TCTCTTCCTAGCCTGGCGGAACGCTCTGCGAGTGCTTGTCTGATTTCGAG
AAGGTCGGCTTTGACGAGAGCGACGTCATGAGGGAAGGCGTTGCGGATAC
GGGCACGCATTTGAATGGTGAATGGATCTTTTTCAAATGCTTGAAGTTGT
CTGACAAAGCCAGGGTTGGGGCAAGCCACTTCGCGACGGGTGCGGATGAA
GTCGAGGGCATCTTTGAAGGAGAGGGCGTGGATGCACATCAAGTAGGAGC
AGACAGCTGTGGTGGATCGACTGACCCCGGCGGCGCAGTGCCTGTATGTG
CGTTGTGATGAATGAGGAGACGACAAGTCTAAACAAGAGACAGCTGTGCT
CGATATTGCAGCGGAGAAAAAACTGGAGCTTTGCATACTTACACGTAGAC
TACGCCTCCACCAACGCGTGCGTTGTGGATAAAAAAAATAAAATCCTCGA
AATGAGGCAGCAGATCACTGTGCGGCAGGTCGCTTTCATTGATGTGCTTC
ACCATCGTCAGACCCGCGGTCGGTGGCGGCTTGGCTTGGCATATCGAGAG
AGCGTGTGTCACTCCATATGTGGTGTAAAAGGATGGGTCTTGCAAAACGT
TTGCTCCCCCGTGAAGGAGAGTGGGGCGCGAGGGCAATCGCGGCTCGTCG
TTGTCATTATTGCTGCTGCTTCTCGTGGTGGGGATCGGTGGGGGCCCGTG
CAGGATCTTGGAGGGTTCACCTCCCATTATTGTAGCTTGTAGGGGCGGTT
GGTGGGTAGGCGTGGGCGAGGGTGATGATGACGACACGAATGCGCCGGGA
GGATAGACGCAGTCGGTCACCGGGGTGGCTGTCAGTGCCCGCCTAAGGTC
CTGAACGCGCCCCCTACTAATTTGTATCGGGGAGCGGGTTAGAGTGTGAG
GAGTTGATTGTGAGGTGTCGTGGGCGAAATGGAGGCAGAAAGTCACAGAC
ACTTTTTGGGGGTAAGAGAAGTTGCACGACGGCGTGCCGGCCTCTCGCGG
AAATCGATCTCGGCGATGCCCTTCAGCCTTGTCTCAGGGGGAACAACTAT
CATCCACACCCAGCACCATGACCTGGAAATTCTGCCGTAGCATTCTACGT
TCATTTCTCACTTGTCCCTACTCTTGCCCACCATTCATACTCAGCCATGC
CTCCCACCGCAGGCAAACGTTCCCTCCCCCTTTCCCTCGTCACGACCAGG
AGCACAGGCACAAAGCAACGAAATACCCCTTCATCGTCAGCTCCAGACCT
TCTCCCTCCCGGAAAATGGGTCAGACGCAGCAAAGACCCTGAGGGCGGCT
TGCTTTTTCGGAATCAACCTCAGCAAACACCAGGAGCCTCCTCCTCTTCG
TCCTCGTCCTTAATTCGAGCCCCATGGGCTAGCACCGAGACGTGTTCTAA
TCACGACCAGCCAATCACCAATTTTTATGGTCGACGACGCAGCAGTGTTA
GTAGCACCATTTATAGCGGCAATGGCGGACGGTATGACGAGGAAAAGAAA
GAAGATTGTTTTGGAGGGAATGCTTGCATGCAGCCCACTCCGGACCGCAC
TGTCGATGACCGCTTGAGGCAGATAAATTTGGCCAATAAGGAGGTGTTTG
GCAACCCCTCTTTCCGTGTAGATCAGGAACGCATTATCCTCGCCGCCTTA
CAAAAGAAGGACGTATTTGTGCTCATGCCCACAGGGGGCGGTAAAAGTTT
GTGCTACCAGCTCCCGGCCATCGTCACCCGCGGCGTTACTCTCGTCGTCA
GTCCATTGATCTCTCTGATCCAAGACCAGGTCTCTGCCTTGGTCAAGCAG
CACCGCATCCCCGCTGCCATCTTGAACAGCACCACTTCTGAATCTATAGC
CAAGGGGATCTACCGGGACTTGCACGCCGTGGACAGGGGGAGGGAGCCGC
AGATTAAGCTTCTGTATGTCACCCCCGAACGATTATTGAAGTCAGTGGCT
TTTCAGGAGCTGCTGACCAAGCTGGATGATCACGGGATGCTGGCTCGCTT
TGTCGTGGACGAGGCTCATTGCGTCAGTCAGTGGGGCCACGACTTTCGCC
CGGATTTCTACCGGCTAGGTGAATTTCGAAATGCATACCCGGATGTCCCC
ATCATGGCGTTGACGGCCACGGCGACCGACGAGGTGCTCCAAGACGTCTA
TCGCGTCCTCGACCTCCACCACCAAGGCCGCAAGAAATGCCTGCTTTTCA
AACAACCGCCTCTGCGGCCCAATTTATTTTTTGAGATCAGGGGTAAAGAG
AAAGACAAAGAGAATGCAAAGCAGGACGTGCTGGAGCTGCTGCAGGACCC
GGCGTCGGGGTGTGGACGCGGGACGGGCATCGTGTATTGCATGACGCAGA
AGGACACGGAGGCCCTGGCGGATTTTTTGTGTGACGCGGGGCAGAGCGCG
GACCATTACCATGCGGGTATGACCGACCGAGAAAGAACGGCCGTCCTGGC
CGCCTGGAGTGCGGGTCAACTCCGCGTCATCTGCGCCACCATCGCTTTCG
GCATGGGCATCGACAAGAAGGCCGTCCGTTTCATCATCCACACCACACTC
GCCAAGTCTCTCGAAGGGTACTTCCAAGAAGTAGGAAGAGCAGGGCGGGA
TGGCTTGCCGGCACGCTGCATCTTGTTTTACCGGAAGGAGGACGTGGGTA
AGCTCAAGAACCTGATAACGGTGCCATTTGGAGGGAGGGGTCGAGGGAGG
GCGGGGGGGAGGAAGAGGAAGGTCGGGGACGTGGAGAAGCTGATGATGAT
GAAGGAGTATTGCGAGGAGAGGAGATTCTGTCGAAGGGCCATGCTGGGGC
AGCATTTCGGGCACACAGAGCGGGTGGACTGTGGGGAGGGTTGTGACAAC
TGTCAGATGGAAGGACGGAGGGAGGAAGGGAGGGAGGGAAGGAGGGGAGG
ATTTGTGGGGGATGACGATGATGTAAGTTATGTGAGATGGGCAAACACAT
TTCGGCGCGAGCAGGGGGGCGGGTTGATAGGAGGGGGGGGAAGGACGAAG
AATGGGAGGGGGTTGGAGTTGCTGCTGCACGTCATGATGGTGATGGTGGA
GGAAAAGGGGGGAAAGGGAGAGAAGGAGGAAGTGGGGGAAGAGGAGGCAT
CTCTATCTTGGATAAAGATGCAAGTGCAGCAGCGGCAGTGGGGGCACCTG
TCAGGAGGGGGGCTCTTTTTGCGTTTGCTTCTTCTGCTGTTGCTGTAGGT
AGAAAGGGTCAGGGAGGGGAAGAGGAAGGTTGGAGGCAGAAGCTGCGAGG
AGGGGCTGTGACGAGTCACTTCCGTCCTTCTAGTATCAATAGAGGAGGAA
TCGAAGAAGGAGAAGAGGGCAATGAGAATGATTGTGTGGTAATTGACTAG
GTGGAGGGGTAAGAGAGGGAGGGATGGAGGGGCTGTAACGGTGACTGCGT
TATTCGTTGTTGGCGAAAGAGCGACACCGGAAGAAGTGCCGAAGAACCGT
GCAGGGCAGATACATATGTAAATTAGATGTGTATGTGGACTTGTTTCCTG
ACTGCGAGTGTATGAAATGGGGCAATAGCTTTGGGAGAGCGAGAGATAAA
GGGATGATAGAAAAATGGATAAATGGATACGCTAGATAGGCGAAGAGGGA
GTGAGCAATCGAAAAATAAAAATAAACGACTTCGAATGGTACGCAATCAA
CGT

protein sequence of NO05G01690.1

>NO05G01690.1-protein ID=NO05G01690.1-protein|Name=NO05G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=684bp
MPPTAGKRSLPLSLVTTRSTGTKQRNTPSSSAPDLLPPGKWVRRSKDPEG
GLLFRNQPQQTPGASSSSSSSLIRAPWASTETCSNHDQPITNFYGRRRSS
VSSTIYSGNGGRYDEEKKEDCFGGNACMQPTPDRTVDDRLRQINLANKEV
FGNPSFRVDQERIILAALQKKDVFVLMPTGGGKSLCYQLPAIVTRGVTLV
VSPLISLIQDQVSALVKQHRIPAAILNSTTSESIAKGIYRDLHAVDRGRE
PQIKLLYVTPERLLKSVAFQELLTKLDDHGMLARFVVDEAHCVSQWGHDF
RPDFYRLGEFRNAYPDVPIMALTATATDEVLQDVYRVLDLHHQGRKKCLL
FKQPPLRPNLFFEIRGKEKDKENAKQDVLELLQDPASGCGRGTGIVYCMT
QKDTEALADFLCDAGQSADHYHAGMTDRERTAVLAAWSAGQLRVICATIA
FGMGIDKKAVRFIIHTTLAKSLEGYFQEVGRAGRDGLPARCILFYRKEDV
GKLKNLITVPFGGRGRGRAGGRKRKVGDVEKLMMMKEYCEERRFCRRAML
GQHFGHTERVDCGEGCDNCQMEGRREEGREGRRGGFVGDDDDVSYVRWAN
TFRREQGGGLIGGGGRTKNGRGLELLLHVMMVMVEEKGGKGEKEEVGEEE
ASLSWIKMQVQQRQWGHLSGGGLFLRLLLLLLL*

mRNA from alignment at chr5:461600..466946-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G01690.1 ID=NO05G01690.1|Name=NO05G01690.1|organism=Nannochloropsis oceanica|type=mRNA|length=5347bp|location=Sequence derived from alignment at chr5:461600..466946- (Nannochloropsis oceanica)
GCTTCGAACCCTTTCCTCGTCTTATACTTTGCCTTTTACATCTTTATGAA
GCTTGCACGGGCCGTGCGGTAGCTAGAAAAGAGATCATTTATCCCATCGT
GCAGATTCTTCTTCGCCTTCGCCTTCTTCTTCTTCACCTCTATCACCTTC
TTCTTCCTCTTTTTCGTTCTTTCTTTGTATAATGCTTTTAAACAGTGGAA
GCCTTCGCGGCCGTACGCTTAGTGTTTACCACTTGCAGCCCATATCTAAC
AGGTTAAATTTTGTCTAAGAAAATAAAGGGTTGTGCCCTTGACATAGAGG
TCTATTTCTCGTCCCCTTCCCTTTCTCCCTCCTTCCCAGCCTCCTCGTCA
TGTTCGAAGAATTACTTGTCTCGCCACTTTTATCTTATGAAATTGCCATG
ATGAAATATTATAAAATGTATTGTTTTGTCGGACACTCTGTCAAGATCGG
TCGACATAAATCTAAGGAAAACGTACATACACACACTACGCAGCTTCACT
CCCCCTCTCCGACTCGCCCTCCCTCCTCCCTGACACCTCATTCATCGGGG
CATCTCCTCCATTCGGGTGTGATGGTCCTTCTCCTCCTCCAACCATGTCA
ATCCATACCCCTTATCCCCCAGCCTCATCGCCATCACGGACGACCCCGCC
GGGGGAGGCTTCATTGGCAACCGGCACTGCTCGTGACTCTCATCATCCTC
CCCTGCCCTCATCCCTTCCGCCGCACCTGCCTGCTGCTCTTGCATCTGGT
GAATCATTTCCAATATTCGGCTTCGAGGATCAAGGATCAGGGCTTTTTCG
TCTCTTCCTAGCCTGGCGGAACGCTCTGCGAGTGCTTGTCTGATTTCGAG
AAGGTCGGCTTTGACGAGAGCGACGTCATGAGGGAAGGCGTTGCGGATAC
GGGCACGCATTTGAATGGTGAATGGATCTTTTTCAAATGCTTGAAGTTGT
CTGACAAAGCCAGGGTTGGGGCAAGCCACTTCGCGACGGGTGCGGATGAA
GTCGAGGGCATCTTTGAAGGAGAGGGCGTGGATGCACATCAAGTAGGAGC
AGACAGCTGTGGTGGATCGACTGACCCCGGCGGCGCAGTGCCTGTATGTG
CGTTGTGATGAATGAGGAGACGACAAGTCTAAACAAGAGACAGCTGTGCT
CGATATTGCAGCGGAGAAAAAACTGGAGCTTTGCATACTTACACGTAGAC
TACGCCTCCACCAACGCGTGCGTTGTGGATAAAAAAAATAAAATCCTCGA
AATGAGGCAGCAGATCACTGTGCGGCAGGTCGCTTTCATTGATGTGCTTC
ACCATCGTCAGACCCGCGGTCGGTGGCGGCTTGGCTTGGCATATCGAGAG
AGCGTGTGTCACTCCATATGTGGTGTAAAAGGATGGGTCTTGCAAAACGT
TTGCTCCCCCGTGAAGGAGAGTGGGGCGCGAGGGCAATCGCGGCTCGTCG
TTGTCATTATTGCTGCTGCTTCTCGTGGTGGGGATCGGTGGGGGCCCGTG
CAGGATCTTGGAGGGTTCACCTCCCATTATTGTAGCTTGTAGGGGCGGTT
GGTGGGTAGGCGTGGGCGAGGGTGATGATGACGACACGAATGCGCCGGGA
GGATAGACGCAGTCGGTCACCGGGGTGGCTGTCAGTGCCCGCCTAAGGTC
CTGAACGCGCCCCCTACTAATTTGTATCGGGGAGCGGGTTAGAGTGTGAG
GAGTTGATTGTGAGGTGTCGTGGGCGAAATGGAGGCAGAAAGTCACAGAC
ACTTTTTGGGGGTAAGAGAAGTTGCACGACGGCGTGCCGGCCTCTCGCGG
AAATCGATCTCGGCGATGCCCTTCAGCCTTGTCTCAGGGGGAACAACTAT
CATCCACACCCAGCACCATGACCTGGAAATTCTGCCGTAGCATTCTACGT
TCATTTCTCACTTGTCCCTACTCTTGCCCACCATTCATACTCAGCCATGC
CTCCCACCGCAGGCAAACGTTCCCTCCCCCTTTCCCTCGTCACGACCAGG
AGCACAGGCACAAAGCAACGAAATACCCCTTCATCGTCAGCTCCAGACCT
TCTCCCTCCCGGAAAATGGGTCAGACGCAGCAAAGACCCTGAGGGCGGCT
TGCTTTTTCGGAATCAACCTCAGCAAACACCAGGAGCCTCCTCCTCTTCG
TCCTCGTCCTTAATTCGAGCCCCATGGGCTAGCACCGAGACGTGTTCTAA
TCACGACCAGCCAATCACCAATTTTTATGGTCGACGACGCAGCAGTGTTA
GTAGCACCATTTATAGCGGCAATGGCGGACGGTATGACGAGGAAAAGAAA
GAAGATTGTTTTGGAGGGAATGCTTGCATGCAGCCCACTCCGGACCGCAC
TGTCGATGACCGCTTGAGGCAGATAAATTTGGCCAATAAGGAGGTGTTTG
GCAACCCCTCTTTCCGTGTAGATCAGGTTTGTGTTGATGGGTAGATGGCT
CTCTATTTCCTGTCCCTTTTGCCTATTCTTCTTAATAGCTCCGATGCTCT
TCTTCTTTCCTCATTCCCTTCTCTCACCATACAGGAACGCATTATCCTCG
CCGCCTTACAAAAGAAGGACGTATTTGTGCTCATGCCCACAGGGGGCGGT
AAAAGGTAAGACTCATTCATTTATTGAAAAAACGAGGAAGGGCAATATCC
CCGCTGGCATATTGAAAAGTAGCAGCACCATACTCCCTCATTCCTCCCTC
CCTTCCATCTCCAAGTTTGTGCTACCAGCTCCCGGCCATCGTCACCCGCG
GCGTTACTCTCGTCGTCAGTCCATTGATCTCTCTGATCCAAGACCAGGTC
TCTGCCTTGGTCAAGCAGCACCGCATCCCCGCTGCCATCTTGAACAGCAC
CACTTCTGAATCTATAGCCAAGGGGATCTACCGGGACTTGCACGCCGTGG
ACAGGGGGAGGGAGCCGCAGATTAAGCTTCTGTATGTCACCCCCGAACGA
TTATTGAAGTCAGTGGCTTTTCAGGCAAGGAAGGAGGGAATGAAGGAGAG
AGGAAGGAGGGAGGCGCTTTGTGGGGCTCACGGTGTCATCTAACAAGAGG
GAGGCGCTTTGTGGGGCTCACGGTGTCATCTAACAATACATTCAATGCGT
TCCCTCTTCCCTTTCTTCCTTTTTCTACCCCTTCCCCTTCCTGGAATCAG
GAGCTGCTGACCAAGCTGGATGATCACGGGATGCTGGCTCGCTTTGTCGT
GGACGAGGCTCATTGCGTCAGTCAGTGGGGCCACGACTTTCGCCCGGATT
TCTACCGGGTATGTTTTCTTTGAAGGGAGGATAATTGCAGGCTTCCCACC
CTTCCCCTCCCTCCCTTCCCCCCTTTACTCTCTTCCACCCTTTCTTTCTC
CCTGTAGCTAGGTGAATTTCGAAATGCATACCCGGATGTCCCCATCATGG
CGTTGACGGCCACGGCGACCGACGAGGTGCTCCAAGACGTCTATCGCGTC
CTCGACCTCCACCACCAAGGCCGCAAGAAATGCCTGCTTTTCAAACAACC
GCCTCTGCGGCCCAATTTATTTTTTGAGATCAGGGGTAAAGAGAAAGACA
AAGAGAATGCAAAGCAGGACGTGCTGGAGCTGCTGCAGGACCCGGCGTCG
GGGTGTGGACGCGGGACGGGCATCGTGTATTGCATGACGCAGAAGGACAC
GGAGGCCCTGGCGGATTTTTTGTGTGACGCGGGGCAGAGCGCGGACCATT
ACCATGCGGGTTGGTGGGAGGAGGCGTGAGGGAGGGAGGGGGGGAAGGGG
ATTGATATTTTTGAATGTTTTTTTAAATGCACAAACAAAGGATTTTTTAC
TTTCCATCACACCTCGCATTTCTCAATAACCTTTCTCCCTCTTCTCCTCC
CTCTCTCTTTCTAAATCTCTCCCTCTTTCTTCTCCCTCTTCTTCTCCCTC
TTCCTTCTTCTCCCTCCCTTCCTCCTTCTCTTCATCACCGTACCGCAATT
TCTCCCTCTCCCTCTTTTCCTTCCAGGTATGACCGACCGAGAAAGAACGG
CCGTCCTGGCCGCCTGGAGTGCGGGTCAACTCCGCGTCATCTGCGCCACC
ATCGCTTTCGGTACGTACGAGAAACAGCACAGTATCGTTTCTTCCTTCCC
TTCCTCCCAAATCACGATGAATCAAACGCTCGCACACTTCTCCGATTCTA
CCCATCCTCCCTCCCTTCCTGCCTTCCTCCTTCTTCCTTGACAGGCATGG
GCATCGACAAGAAGGCCGTCCGTTTCATCATCCACACCACACTCGCCAAG
TCTCTCGAAGGGTACTTCCAAGAAGTAGGAAGAGCAGGGCGGGATGGCTT
GCCGGCACGCTGCATCTTGTTTTACCGGAAGGAGGACGTGGGTAAGCTCA
AGAACCTGATAACGGTGCCATTTGGAGGGAGGGGTCGAGGGAGGGCGGGG
GGGAGGAAGAGGAAGGTCGGGGACGTGGAGAAGCTGATGATGATGAAGGA
GTATTGCGAGGAGAGGAGATTCTGTCGAAGGGCCATGCTGGGGCAGCATT
TCGGGCACACAGAGCGGGTGGACTGTGGGGAGGGTTGTGACAACTGTCAG
ATGGAAGGACGGAGGGAGGAAGGGAGGGAGGGAAGGAGGGGAGGATTTGT
GGGGGATGACGATGATGTAAGTTATGTGAGATGGGCAAACACATTTCGGC
GCGAGCAGGGGGGCGGGTTGATAGGAGGGGGGGGAAGGACGAAGAATGGG
AGGGGGTTGGAGTTGCTGCTGCACGTCATGATGGTGATGGTGGAGGAAAA
GGGGGGAAAGGGAGAGAAGGAGGAAGTGGGGGAAGAGGAGGCATCTCTAT
CTTGGATAAAGATGCAAGTGCAGCAGCGGCAGTGGGGGCACCTGTCAGGA
GGGGGGCTCTTTTTGCGTTTGCTTCTTCTGCTGTTGCTGTAGGTAGAAAG
GGTCAGGGAGGGGAAGAGGAAGGTTGGAGGCAGAAGCTGCGAGGAGGGGC
TGTGACGAGTCACTTCCGTCCTTCTAGTATCAATAGAGGAGGAATCGAAG
AAGGAGAAGAGGGCAATGAGAATGATTGTGTGGTAATTGACTAGGTGGAG
GGGTAAGAGAGGGAGGGATGGAGGGGCTGTAACGGTGACTGCGTTATTCG
TTGTTGGCGAAAGAGCGACACCGGAAGAAGTGCCGAAGAACCGTGCAGGG
CAGATACATATGTAAATTAGATGTGTATGTGGACTTGTTTCCTGACTGCG
AGTGTATGAAATGGGGCAATAGCTTTGGGAGAGCGAGAGATAAAGGGATG
ATAGAAAAATGGATAAATGGATACGCTAGATAGGCGAAGAGGGAGTGAGC
AATCGAAAAATAAAAATAAACGACTTCGAATGGTACGCAATCAACGT

Coding sequence (CDS) from alignment at chr5:461600..466946-

>NO05G01690.1 ID=NO05G01690.1|Name=NO05G01690.1|organism=Nannochloropsis oceanica|type=CDS|length=2052bp|location=Sequence derived from alignment at chr5:461600..466946- (Nannochloropsis oceanica)
ATGCCTCCCACCGCAGGCAAACGTTCCCTCCCCCTTTCCCTCGTCACGAC
CAGGAGCACAGGCACAAAGCAACGAAATACCCCTTCATCGTCAGCTCCAG
ACCTTCTCCCTCCCGGAAAATGGGTCAGACGCAGCAAAGACCCTGAGGGC
GGCTTGCTTTTTCGGAATCAACCTCAGCAAACACCAGGAGCCTCCTCCTC
TTCGTCCTCGTCCTTAATTCGAGCCCCATGGGCTAGCACCGAGACGTGTT
CTAATCACGACCAGCCAATCACCAATTTTTATGGTCGACGACGCAGCAGT
GTTAGTAGCACCATTTATAGCGGCAATGGCGGACGGTATGACGAGGAAAA
GAAAGAAGATTGTTTTGGAGGGAATGCTTGCATGCAGCCCACTCCGGACC
GCACTGTCGATGACCGCTTGAGGCAGATAAATTTGGCCAATAAGGAGGTG
TTTGGCAACCCCTCTTTCCGTGTAGATCAGGAACGCATTATCCTCGCCGC
CTTACAAAAGAAGGACGTATTTGTGCTCATGCCCACAGGGGGCGGTAAAA
GTTTGTGCTACCAGCTCCCGGCCATCGTCACCCGCGGCGTTACTCTCGTC
GTCAGTCCATTGATCTCTCTGATCCAAGACCAGGTCTCTGCCTTGGTCAA
GCAGCACCGCATCCCCGCTGCCATCTTGAACAGCACCACTTCTGAATCTA
TAGCCAAGGGGATCTACCGGGACTTGCACGCCGTGGACAGGGGGAGGGAG
CCGCAGATTAAGCTTCTGTATGTCACCCCCGAACGATTATTGAAGTCAGT
GGCTTTTCAGGAGCTGCTGACCAAGCTGGATGATCACGGGATGCTGGCTC
GCTTTGTCGTGGACGAGGCTCATTGCGTCAGTCAGTGGGGCCACGACTTT
CGCCCGGATTTCTACCGGCTAGGTGAATTTCGAAATGCATACCCGGATGT
CCCCATCATGGCGTTGACGGCCACGGCGACCGACGAGGTGCTCCAAGACG
TCTATCGCGTCCTCGACCTCCACCACCAAGGCCGCAAGAAATGCCTGCTT
TTCAAACAACCGCCTCTGCGGCCCAATTTATTTTTTGAGATCAGGGGTAA
AGAGAAAGACAAAGAGAATGCAAAGCAGGACGTGCTGGAGCTGCTGCAGG
ACCCGGCGTCGGGGTGTGGACGCGGGACGGGCATCGTGTATTGCATGACG
CAGAAGGACACGGAGGCCCTGGCGGATTTTTTGTGTGACGCGGGGCAGAG
CGCGGACCATTACCATGCGGGTATGACCGACCGAGAAAGAACGGCCGTCC
TGGCCGCCTGGAGTGCGGGTCAACTCCGCGTCATCTGCGCCACCATCGCT
TTCGGCATGGGCATCGACAAGAAGGCCGTCCGTTTCATCATCCACACCAC
ACTCGCCAAGTCTCTCGAAGGGTACTTCCAAGAAGTAGGAAGAGCAGGGC
GGGATGGCTTGCCGGCACGCTGCATCTTGTTTTACCGGAAGGAGGACGTG
GGTAAGCTCAAGAACCTGATAACGGTGCCATTTGGAGGGAGGGGTCGAGG
GAGGGCGGGGGGGAGGAAGAGGAAGGTCGGGGACGTGGAGAAGCTGATGA
TGATGAAGGAGTATTGCGAGGAGAGGAGATTCTGTCGAAGGGCCATGCTG
GGGCAGCATTTCGGGCACACAGAGCGGGTGGACTGTGGGGAGGGTTGTGA
CAACTGTCAGATGGAAGGACGGAGGGAGGAAGGGAGGGAGGGAAGGAGGG
GAGGATTTGTGGGGGATGACGATGATGTAAGTTATGTGAGATGGGCAAAC
ACATTTCGGCGCGAGCAGGGGGGCGGGTTGATAGGAGGGGGGGGAAGGAC
GAAGAATGGGAGGGGGTTGGAGTTGCTGCTGCACGTCATGATGGTGATGG
TGGAGGAAAAGGGGGGAAAGGGAGAGAAGGAGGAAGTGGGGGAAGAGGAG
GCATCTCTATCTTGGATAAAGATGCAAGTGCAGCAGCGGCAGTGGGGGCA
CCTGTCAGGAGGGGGGCTCTTTTTGCGTTTGCTTCTTCTGCTGTTGCTGT
AG

Synonyms

Publications