NO04G04420.1, NO04G04420.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G04420.1
Unique Name	NO04G04420.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3725
Alignment location	chr4:1197866..1202939 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:1197866..1202939 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G04420.1 vs.
Match: EWM28825.1 (acyl- dehydrogenase [Nannochloropsis gaditana]; EWM28826.1 acyl- dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 1413.3 bits (3657), Expect = 0.000e+0
Identity = 716/771 (92.87%), Postives = 740/771 (95.98%), Query Frame = 0

Query:   77 MEAFHRRGMKVAMTLARSSGANPAARMAVPQQRQFFQAAYNLAKKVTPKISATEAAALDAGTVGFDRDLFAGNPSLTGLKKKYDLKITAEERAFLENEVEQLCAMSNEYDMYKNKDLPQPVWDFIRKNGFLGMIIDKQYGGKGFSAHGHALVVQKLSTRSQSVGVSVMVPNSLGPGELLKRYGTQAEKDYYLPKLANGELIPCFGLTGPASGSDAAAMRDQATVVEENGVLGVRATFKKRYITLAPVAGCVGLAVQLKDPNGLLKGKGKEGISIFLLERDLPGLRMGPRHDPLSAFFMNGTVEGEDVFIPIDKLLGGQERAGYGWNMLMDCLAEGRSISLPAGAIAIGKLSVTAVGAYARIRKQFKVPIAELEGVQEHLARIAGHTYVITAAQGLTNSMLNQHEQPAVISAIMKQQCTNRGRQIVNDAMDVLGGAGICMGPNNFMGANYMATPIAITVEGANTLTRSLIQFGQGLMRAHPHLLDVVKAVQKGDDLKGFNQGLAGMFSHGAVNATRSFGKALIRSRSKSNFEGYYESQLGRLASAFAIASDLSLTMGGKIKFAESLSGRYADVLSNLYLGYATLWFHGKNPSQGGDAVAAWALDNILVDIQDAFYGISENFPIRPVGWAIQALTFPTGKTYVRPSDKLTTEVAQLISKPSGVRDLLSQDIYVHKDLTDRVALLNATLPKAVKVDEIYTKLRKEKRTATAEEQKLIDEVEAAREIIIQVDSFSSLGQESNIKGWKTEDRPALQDIYGVKKAAKNANMSEQLAA 848
            MEAFHRRGMK A+ LARS  A P++ M  PQQRQFF AAYNLAKKVTPKISATEAAAL+AGTVGFDRDLFAG+PSL GLK KYDLKI+AEERAFLENEVE+LC MSNEY+MYKNKDLPQPVWD+IRKNGFLGMIIDK+YGGKGFSAHGHALVVQKLSTRSQSVGVSVMVPNSLGPGELLKRYGT+AEKDYYLPKLA GELIPCFGLTGPASGSDAAAMRDQA VVEENG LGVRATFKKRYITLAPVAGCVGLAVQLKDPNGLLKGKGKEGISIFLLERDLPGLRMGPRHDPLSAFFMNGTVEGE+VFIPIDKLLGGQERAGYGWNMLMDCLAEGR+ISLPAGAIAIGKLSVTAVGAYARIRKQFKVPIAELEGVQEHLARIAGHTYVITAAQ LTNSMLNQHEQPAVISAIMKQQCT+RGRQIVNDAMDVLGGAGICMGPNNFMGANYMATPIAITVEGANTLTRSLIQFGQGLMRAHPHLL VV+AVQKGDDL+GFN+GLAGMFSHGAVNATRSF KA IRSRSKSNFEGYYESQLGRLA+AFAIASDLSLTMGGKIKFAESLSGRYADVLSNLYLGYATLWFH K P+QG +AVAAWALDNILVDIQDAFYGI+EN+PIRPVGWAI ALTFPTGKTYVRPSDKLTT+VAQLISKPSGVRDLLSQDIYVHKDL DRVALLNATLPKAVKVDEIYTKLRKEKRTATAEEQKLIDEVEAAREIIIQVDSF SLGQES  KGWKTEDRPALQDIYGVKK  KN N +EQLAA
Sbjct:    1 MEAFHRRGMKTALALARSKSAIPSS-MVAPQQRQFFAAAYNLAKKVTPKISATEAAALEAGTVGFDRDLFAGSPSLEGLKNKYDLKISAEERAFLENEVEKLCEMSNEYEMYKNKDLPQPVWDYIRKNGFLGMIIDKKYGGKGFSAHGHALVVQKLSTRSQSVGVSVMVPNSLGPGELLKRYGTEAEKDYYLPKLATGELIPCFGLTGPASGSDAAAMRDQAIVVEENGQLGVRATFKKRYITLAPVAGCVGLAVQLKDPNGLLKGKGKEGISIFLLERDLPGLRMGPRHDPLSAFFMNGTVEGENVFIPIDKLLGGQERAGYGWNMLMDCLAEGRAISLPAGAIAIGKLSVTAVGAYARIRKQFKVPIAELEGVQEHLARIAGHTYVITAAQSLTNSMLNQHEQPAVISAIMKQQCTSRGRQIVNDAMDVLGGAGICMGPNNFMGANYMATPIAITVEGANTLTRSLIQFGQGLMRAHPHLLSVVQAVQKGDDLQGFNKGLAGMFSHGAVNATRSFSKAFIRSRSKSNFEGYYESQLGRLAAAFAIASDLSLTMGGKIKFAESLSGRYADVLSNLYLGYATLWFHSKYPAQGSEAVAAWALDNILVDIQDAFYGIAENYPIRPVGWAIHALTFPTGKTYVRPSDKLTTQVAQLISKPSGVRDLLSQDIYVHKDLNDRVALLNATLPKAVKVDEIYTKLRKEKRTATAEEQKLIDEVEAAREIIIQVDSFPSLGQESVTKGWKTEDRPALQDIYGVKK-GKNGNAAEQLAA 769

The following BLAST results are available for this feature:

BLAST of NO04G04420.1 vs.

BLAST of NO04G04420.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28825.1	0.000e+0	92.87	acyl- dehydrogenase [Nannochloropsis gaditana]; EW...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G04420	NO04G04420	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04420.1	NO04G04420.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04420.1.cds1	NO04G04420.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04420.1.cds2	NO04G04420.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04420.1.cds3	NO04G04420.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04420.1.cds4	NO04G04420.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04420.1.cds5	NO04G04420.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04420.1.cds6	NO04G04420.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04420.1.cds7	NO04G04420.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04420.1.cds8	NO04G04420.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04420.1.cds9	NO04G04420.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:1197866..1202939+
coding sequence from alignment at chr4:1197866..1202939+

mRNA sequence

>NO04G04420.1 ID=NO04G04420.1|Name=NO04G04420.1|organism=Nannochloropsis oceanica|type=mRNA|length=3725bp
CTCCCTCACTCACGCAGCCAGCAGGGCGTCCGCCATCTCTCCTCAAGTTG
AGTTTGCGCAGGGCTTCCGTGCAGTTCCCCAGTCCTCCTTATCCCTTCTA
ATCCTCTTGTCTGCGTTTCCTTTTCGCCTTGAACCACCTTCAGTATGTCT
CGCAAGGCACGTGGGTGGTGTCTTTGTGCCGCGTAGGTCTGGATGTAGCA
GGGGCGTGGCGTCGTCCCCTGCGGTAGTTATTAAAACTTAGTCAGCGAAC
GCGAACAATTGGCCTTCAGTGTTCCAAGTCCCTCTTCCTGTGGCCCGCGT
CCTCGATGTTGTGGTGGCACCACGCTGCATATAACAGGATGCATGGGCTC
GGTCCTGAATCAGAGGCCAAAGAGCGAGGTTTGCCACGAGCCTGGATGGT
CGTCATCCTCTCGTGGCGGGCGCCGTATTCTCACCACACTCATCCCGCGT
TGCCCTCCCCTTCACAGGTTCAAGCAAGCCGGCCAAAGCCTTCGCTTCTC
GACCTCGTCGTCTCAAAGCAAACACAGCGGAGCCCTCCCTCGTCCGTCCT
CACAAACTCAACCACCACTTATGGAAGCCTTTCATCGCCGCGGCATGAAG
GTGGCCATGACCCTTGCCCGGTCCTCCGGTGCCAACCCTGCCGCGCGTAT
GGCCGTGCCCCAACAGCGGCAGTTCTTCCAGGCAGCTTACAATCTGGCCA
AGAAAGTCACGCCCAAGATCTCGGCCACCGAGGCGGCTGCCTTGGATGCA
GGGACCGTCGGCTTTGACCGTGATTTGTTTGCAGGAAACCCGTCCTTGAC
AGGCCTGAAGAAGAAGTACGACTTAAAGATCACCGCCGAGGAACGTGCCT
TCTTGGAGAACGAAGTGGAGCAGCTCTGCGCGATGTCCAACGAGTATGAC
ATGTACAAGAACAAGGACCTTCCCCAGCCGGTCTGGGACTTCATCCGTAA
GAACGGTTTCCTGGGCATGATTATTGACAAGCAATATGGCGGGAAGGGTT
TCTCCGCCCACGGTCATGCCCTGGTGGTGCAGAAACTGTCGACCCGCTCC
CAGTCTGTGGGTGTCTCAGTCATGGTGCCCAACTCTCTGGGCCCCGGTGA
GCTGCTCAAGCGTTATGGCACACAAGCCGAAAAGGACTACTACCTGCCCA
AGCTGGCCAATGGCGAGCTCATCCCCTGCTTCGGCCTGACGGGCCCCGCC
TCCGGGTCGGATGCCGCGGCCATGCGCGACCAGGCGACTGTAGTGGAGGA
AAACGGCGTCTTGGGTGTCCGTGCGACCTTCAAGAAGCGTTACATCACCC
TGGCACCTGTGGCGGGGTGTGTAGGGCTGGCCGTGCAGTTGAAGGACCCC
AATGGTTTATTGAAGGGGAAGGGCAAGGAAGGCATTTCGATTTTCTTGCT
CGAGCGAGACTTGCCCGGCCTCAGGATGGGACCGAGGCACGACCCGCTGT
CGGCATTTTTTATGAATGGCACAGTGGAGGGGGAGGATGTATTCATCCCC
ATTGACAAGCTGCTGGGGGGGCAGGAGCGAGCAGGGTACGGGTGGAACAT
GTTGATGGACTGCTTGGCCGAGGGACGATCCATCAGTCTCCCGGCGGGGG
CGATCGCAATTGGTAAGTTGTCGGTGACGGCCGTGGGCGCCTATGCCCGC
ATTCGCAAGCAGTTTAAGGTGCCCATTGCGGAGCTGGAGGGCGTGCAGGA
GCACCTGGCGCGGATCGCGGGCCACACTTATGTGATCACGGCGGCTCAGG
GACTGACGAACTCGATGCTGAACCAACACGAGCAGCCGGCGGTCATCTCG
GCCATCATGAAGCAGCAGTGCACGAACCGCGGGCGACAGATTGTAAACGA
TGCCATGGATGTCCTGGGTGGGGCTGGCATTTGCATGGGTCCCAATAATT
TTATGGGCGCGAATTACATGGCTACGCCGATTGCGATTACCGTGGAGGGG
GCCAACACACTGACGAGGTCTTTGATCCAGTTCGGGCAGGGCCTGATGCG
CGCACACCCGCACTTGTTGGACGTTGTCAAGGCTGTGCAGAAGGGGGACG
ACCTCAAGGGGTTCAACCAGGGGCTGGCTGGGATGTTCTCGCATGGGGCG
GTGAACGCCACCCGGTCCTTTGGAAAGGCCTTAATTCGCAGCAGGAGCAA
GAGCAATTTCGAAGGGTACTACGAGTCGCAGCTGGGTCGCCTTGCCTCGG
CTTTTGCCATCGCCTCGGATCTGTCCCTCACTATGGGCGGGAAGATCAAG
TTTGCCGAGTCCCTCTCTGGCCGCTATGCCGACGTGTTGTCTAACCTCTA
CTTGGGCTATGCCACCCTCTGGTTCCATGGCAAGAACCCCTCCCAAGGTG
GCGACGCCGTGGCGGCCTGGGCCCTGGACAACATACTGGTGGATATCCAG
GACGCATTTTACGGCATCTCCGAAAATTTCCCCATCCGCCCCGTGGGATG
GGCCATCCAGGCCTTGACCTTCCCCACGGGCAAGACGTACGTCCGCCCCT
CCGACAAGCTGACCACGGAGGTGGCGCAGCTCATCAGCAAGCCCTCTGGC
GTGCGTGACCTGCTCTCCCAGGACATTTACGTGCACAAGGACCTGACCGA
CCGCGTCGCCCTTCTCAACGCCACCCTCCCCAAGGCCGTCAAGGTGGATG
AGATCTACACCAAGCTTCGCAAGGAGAAGCGTACCGCCACGGCCGAGGAG
CAGAAGCTCATCGATGAGGTGGAGGCCGCCCGTGAGATCATTATCCAGGT
TGACTCCTTCTCGTCGCTGGGCCAGGAGTCGAACATTAAGGGCTGGAAGA
CGGAGGATCGCCCCGCGTTGCAGGATATCTACGGTGTGAAAAAGGCGGCG
AAGAACGCGAACATGTCGGAGCAACTGGCTGCGTAAAGAGGGTGCTTTAA
GAAGGGGGAAGGGATAGAGAGATGGATGAAGGGGAGACTATAGATTAATT
ATGATTTGAAGGAAACGTAAACGTGCATACACATTTTTGGCTTAGGTGGG
AGAAGTAGAAGATAAGAAAGAGGAGGGAGAAGAGGAAGGAAAGGAAGAAC
CACAAGGCGAGACAGGAAATGAATCAGATCCCTCAAAAAAGAATAACAAC
CTTCTTGCCACCCTTAAAAAAGAAACGGACATTGATAGAGAGACAGTAGA
GCAGGGCCGAGGGCGGAGAAGCAAGGGAAGCGAGAAACTATCTTATATTT
CATTTCCTCTACCGGGAAAGACCGAAAAGAGAAGGAGGGAAAGTAGTAGG
AGGAGGACGAACAGGAAGTGTGTCTGTAATCGCAGGGAAACAGCGAAGAG
GGGAAGAAGAGGACGAGAAACAGGGTTTACGGGCCAACGTTCAGAGGCAC
GTGCGCACGTATGTTTATCGATATGATCACCACTTGCACACCCTCACACT
CCCCGCGAAAGACACAAGGAGAAAGAGAAAGGAGGGGGTGTAGGAAGAAT
ATGAAAAGAAGGAGAAAAATAGTTTTTGAGGATCGCTCCTGCGGGAGGAC
TTCTTCGCTGCTATCGCCATATTTCCTGCTTGTTCTTGTGTCTTGTTGTC
GATATCCTGTGAGCTTTCCCATCCGCATATACACAGAATACATCTATTCA
ATATGAATTATAGAGATTTATGCAGTATATCACATAGATCTATATAATAA
TACAAATTATAGATAGGTAATATATAAGTACAGGTTACGATAAAGCAAAA
CAGAAAGCCCAGAGGGAAATCGAGT

protein sequence of NO04G04420.1

>NO04G04420.1-protein ID=NO04G04420.1-protein|Name=NO04G04420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=848bp
MGSVLNQRPKSEVCHEPGWSSSSRGGRRILTTLIPRCPPLHRFKQAGQSL
RFSTSSSQSKHSGALPRPSSQTQPPLMEAFHRRGMKVAMTLARSSGANPA
ARMAVPQQRQFFQAAYNLAKKVTPKISATEAAALDAGTVGFDRDLFAGNP
SLTGLKKKYDLKITAEERAFLENEVEQLCAMSNEYDMYKNKDLPQPVWDF
IRKNGFLGMIIDKQYGGKGFSAHGHALVVQKLSTRSQSVGVSVMVPNSLG
PGELLKRYGTQAEKDYYLPKLANGELIPCFGLTGPASGSDAAAMRDQATV
VEENGVLGVRATFKKRYITLAPVAGCVGLAVQLKDPNGLLKGKGKEGISI
FLLERDLPGLRMGPRHDPLSAFFMNGTVEGEDVFIPIDKLLGGQERAGYG
WNMLMDCLAEGRSISLPAGAIAIGKLSVTAVGAYARIRKQFKVPIAELEG
VQEHLARIAGHTYVITAAQGLTNSMLNQHEQPAVISAIMKQQCTNRGRQI
VNDAMDVLGGAGICMGPNNFMGANYMATPIAITVEGANTLTRSLIQFGQG
LMRAHPHLLDVVKAVQKGDDLKGFNQGLAGMFSHGAVNATRSFGKALIRS
RSKSNFEGYYESQLGRLASAFAIASDLSLTMGGKIKFAESLSGRYADVLS
NLYLGYATLWFHGKNPSQGGDAVAAWALDNILVDIQDAFYGISENFPIRP
VGWAIQALTFPTGKTYVRPSDKLTTEVAQLISKPSGVRDLLSQDIYVHKD
LTDRVALLNATLPKAVKVDEIYTKLRKEKRTATAEEQKLIDEVEAAREII
IQVDSFSSLGQESNIKGWKTEDRPALQDIYGVKKAAKNANMSEQLAA*

mRNA from alignment at chr4:1197866..1202939+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G04420.1 ID=NO04G04420.1|Name=NO04G04420.1|organism=Nannochloropsis oceanica|type=mRNA|length=5074bp|location=Sequence derived from alignment at chr4:1197866..1202939+ (Nannochloropsis oceanica)
CTCCCTCACTCACGCAGCCAGCAGGGCGTCCGCCATCTCTCCTCAAGTTG
AGTTTGCGCAGGGCTTCCGTGCAGTTCCCCAGTCCTCCTTATCCCTTCTA
ATCCTCTTGTCTGCGTTTCCTTTTCGCCTTGAACCACCTTCAGTATGTCT
CGCAAGGCACGTGGGTGGTGTCTTTGTGCCGCGTAGGTCTGGATGTAGCA
GGGGCGTGGCGTCGTCCCCTGCGGTAGTTATTAAAACTTAGTCAGCGAAC
GCGAACAATTGGCCTTCAGTGTTCCAAGTCCCTCTTCCTGTGGCCCGCGT
CCTCGATGTTGTGGTGGCACCACGCTGCATATAACAGGATGCATGGGCTC
GGTCCTGAATCAGAGGCCAAAGAGCGAGGTTTGCCACGAGCCTGGATGGT
CGTCATCCTCTCGTGGCGGGCGCCGTATTCTCACCACACTCATCCCGCGT
TGCCCTCCCCTTCACAGGTTCAAGCAAGCCGGCCAAAGCCTTCGCTTCTC
GACCTCGTCGTCTCAAAGCAAACACAGCGGAGCCCTCCCTCGTCCGTCCT
CACAAACTCAACCACCACTTATGGAAGCCTTTCATCGCCGCGGCATGAAG
GTGGCCATGACCCTTGCCCGGTCCTCCGGTGCCAACCCTGCCGCGCGTAT
GGCCGTGCCCCAACAGCGGCAGTTCTTCCAGGCAGCTTACAATCTGGCCA
AGAAAGTCACGCCCAAGATCTCGGCCACCGAGGCGGCTGCCTTGGATGCA
GGGACCGTCGGCTTTGACCGTGATTTGTTTGCAGGAAACCCGTCCTTGAC
AGGCCTGAAGAAGAAGTACGACTTAAAGGTACGTGTGTGGAGCAAGGGAG
AGAGGAAAGGAGGGAAAGAGAGAGGGAGGGAGAGATGTATGCGTTGAGAC
AAAATGACAGACGCGGCTGGCGACCCTTACAGTCGCCTTCCGTGTGTATC
ACACACAAGCCAGCTCGCTATTCACTTCACATGGTGCGAGAGAACGGCCA
AAAACACTTATTCTTCCTTTTTCCGGTCCCTTTTTTCTTCACCGTACCAA
ACAGATCACCGCCGAGGAACGTGCCTTCTTGGAGAACGAAGTGGAGCAGC
TCTGCGCGATGTCCAACGAGTATGACATGTACAAGAACAAGGTACGTAGG
TCTCTCCCTCCCCCTCTCCCTCCCTCCCTCCCCTTCTCTGTTTCCTTCCT
GCCTGGCACTCTTCCTTTCTAATGGGAAGGAAACAAGCAAATTGATCTTT
TTCCTCCCTTTTTCCTTCCCTCCCTCCCTCCCTCCTTCGCTCCCTCCCCT
TCTCTCTCTGTAGGACCTTCCCCAGCCGGTCTGGGACTTCATCCGTAAGA
ACGGTTTCCTGGGCATGATTATTGACAAGCAATATGGCGGGAAGGGTTTC
TCCGCCCACGGTCATGCCCTGGTGGTGCAGAAACTGTCGACCCGCTCCCA
GTCTGTGGGTGTCTCAGTCATGGTGCCCAACTCTCTGGGCCCCGGTGAGC
TGCTCAAGGTGAGGCAAGCCCTTCCTCCTTCCTTCCTTCCTTCACCGCGA
CCGGTCTATGTGAGTGTACTCCTCTCCTCACCACACCCTCCCTTCCTCCT
TCCCTCCCTCCTTTCTGCCCTAGCGTTATGGCACACAAGCCGAAAAGGAC
TACTACCTGCCCAAGCTGGCCAATGGCGAGCTCATCCCCTGCTTCGGCCT
GACGGGCCCCGCCTCCGGGTCGGATGCCGCGGCCATGCGCGACCAGGCGA
CTGTAGTGGAGGAAAACGGCGTCTTGGGTGTCCGTGCGACCTTCAAGAAG
CGTTACATCACCCTGGCACCTGTGGCGGGGTGTGTAGGGCTGGCCGTGCA
GTTGAAGGACCCCAATGGTTTATTGAAGGGGAAGGGCAAGGAAGGCATTT
CGATTTTCTTGCTCGAGCGAGACTTGCCCGGCCTCAGGATGGGACCGAGG
CACGACCCGCTGTCGGCATTTTTTATGAATGGCACAGTGGAGGGGGAGGA
TGTATTCATCCCCATTGACAAGCTGCTGGGGGGGCAGGAGCGAGCAGGGT
ACGGGTGGAACATGTTGATGGACTGCTTGGCCGAGGGACGATCCATCAGT
CTCCCGGCGGGGGCGATCGCAATTGGTAAGTTGTCGGTGACGGCCGTGGG
CGCCTATGCCCGCATTCGCAAGCAGTTTAAGGTGCCCATTGCGGAGCTGG
AGGGCGTGCAGGAGCACCTGGCGCGGATCGCGGGCCACACTTATGTGATC
ACGGCGGCTCAGGGACTGACGAACTCGATGCTGAACCAACACGAGCAGCC
GGCGGTCATCTCGGCCATCATGAAGCAGCAGTGCACGAACCGCGGGCGAC
AGATTGTAAACGATGCCATGGATGTCCTGGGTGGGGCTGGCATTTGCATG
GGTCCCAATAATTTTATGGGCGCGAATTACATGGCTACGCCGATTGCGAT
TACCGTGGAGGGGGCCAACACACTGACGAGGTCTTTGATCCAGTTCGGGC
AGGGCCTGATGCGCGCACACCCGCACTTGTTGGACGTTGTCAAGGCTGTG
CAGAAGGGGGACGACCTCAAGGGGTTCAACCAGGGGCTGGCTGGGATGTT
CTCGCATGGGGCGGTGAACGCCACCCGGTCCTTTGGAAAGGCCTTAATTC
GCAGCAGGAGCAAGAGCAATTTCGAAGGGTACTACGAGTCGCAGGTATGA
GGGAGGGAGGGAGGGAAGAGAGGGATGGAAGGAAGAGAGGAAATGACGAT
CACAGCAAATTGGAATAAATGGACTTTGAGAGGAACGAGGGGATGATAAG
CACCAATACCAACATCAACAACAACCACTCATATGCCACTTTGACCATCC
CCCATTTCCATCCAGCTGGGTCGCCTTGCCTCGGCTTTTGCCATCGCCTC
GGATCTGTCCCTCACTATGGGCGGGAAGATCAAGTTTGCCGAGTCCCTCT
CTGGCCGCTATGCCGACGTGTTGTCTAACCTCTACTTGGGCTATGCCACC
CTCTGGTTCCATGGCAAGAACCCCTCCCAAGGTGGCGACGCCGTGGCGGC
CTGGGCCCTGGACAACATACTGGTGGATATCCAGGTGGGTGGCAAGCACT
TGAGCCCTCCCTCCGTCCCACCTTATTGCCCTCCTACCCTCCCGCCCTCC
CGTTTGTCCAGTGTTGTTGTGTGGCTACTCTCCTCACCGCCTCTTCCCTC
CCTCCCCCTTTCACTCCAGGACGCATTTTACGGCATCTCCGAAAATTTCC
CCATCCGCCCCGTGGGATGGGCCATCCAGGCCTTGACCTTCCCCACGGGC
AAGACGTACGTCCGCCCCTCCGACAAGCTGACCACGGAGGTGGCGCAGCT
CATCAGCAAGCCCTCTGGTACGTGTCACAGGAAGGGAGGGAGAGAGGGAG
AGTGCGGAAGTGCGAGGGGAAAGTCTTAATCAAACGGTCCGTTGTGAAGT
CTGACCGTCCTACCTCCCTCCTTCCTCCCTCCCTCTCTCCCTCCCTCCCT
CCCTCCCTCCAGGCGTGCGTGACCTGCTCTCCCAGGACATTTACGTGCAC
AAGGACCTGACCGACCGCGTCGCCCTTCTCAACGCCACCCTCCCCAAGGC
CGTCAAGGTATGCCCTCCCTCCCTCCTTCCCTCTTGTCCTTTTTGCAGTG
GACGAGCATTAAACGAACCCGAAAGAATCACCGGCTCATCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCTAAAGGTGGATGAGATCTACACCAAGCT
TCGCAAGGAGAAGCGTACCGCCACGGCCGAGGAGCAGAAGCTCATCGATG
AGGTGGAGGCCGCCCGTGAGATCATTATCCAGGTAATTAATTAATTATTA
CATGTTTGGCGTCTTCCCCCCCTTTCCGTCCCGTTCCTTTTTTCTCCCCT
TCCCCTTTTCGTTTCTTCCCTCCTCTCCCTCTCTCCCGCTGTCCCAGCCT
TGTTTCTTCTCTTCTTTCCCTTCTTCCGTCCTTCCCCCCGCCCTTCGGAC
CTCCTGGTTATCCTCAGTACATGAAGAAAACAGGTCGCTCATGCCTCCCT
CCCTCTTTCTCTCCCTCCCTCTTTCCCTCCCTCCATCTTTCCTTTAGGTT
GACTCCTTCTCGTCGCTGGGCCAGGAGTCGAACATTAAGGGCTGGAAGAC
GGAGGATCGCCCCGCGTTGCAGGATATCTACGGTGTGAAAAAGGCGGCGA
AGAACGCGAACATGTCGGAGCAACTGGCTGCGTAAAGAGGGTGCTTTAAG
AAGGGGGAAGGGATAGAGAGATGGATGAAGGGGAGACTATAGATTAATTA
TGATTTGAAGGAAACGTAAACGTGCATACACATTTTTGGCTTAGGTGGGA
GAAGTAGAAGATAAGAAAGAGGAGGGAGAAGAGGAAGGAAAGGAAGAACC
ACAAGGCGAGACAGGAAATGAATCAGATCCCTCAAAAAAGAATAACAACC
TTCTTGCCACCCTTAAAAAAGAAACGGACATTGATAGAGAGACAGTAGAG
CAGGGCCGAGGGCGGAGAAGCAAGGGAAGCGAGAAACTATCTTATATTTC
ATTTCCTCTACCGGGAAAGACCGAAAAGAGAAGGAGGGAAAGTAGTAGGA
GGAGGACGAACAGGAAGTGTGTCTGTAATCGCAGGGAAACAGCGAAGAGG
GGAAGAAGAGGACGAGAAACAGGGTTTACGGGCCAACGTTCAGAGGCACG
TGCGCACGTATGTTTATCGATATGATCACCACTTGCACACCCTCACACTC
CCCGCGAAAGACACAAGGAGAAAGAGAAAGGAGGGGGTGTAGGAAGAATA
TGAAAAGAAGGAGAAAAATAGTTTTTGAGGATCGCTCCTGCGGGAGGACT
TCTTCGCTGCTATCGCCATATTTCCTGCTTGTTCTTGTGTCTTGTTGTCG
ATATCCTGTGAGCTTTCCCATCCGCATATACACAGAATACATCTATTCAA
TATGAATTATAGAGATTTATGCAGTATATCACATAGATCTATATAATAAT
ACAAATTATAGATAGGTAATATATAAGTACAGGTTACGATAAAGCAAAAC
AGAAAGCCCAGAGGGAAATCGAGT

Coding sequence (CDS) from alignment at chr4:1197866..1202939+

>NO04G04420.1 ID=NO04G04420.1|Name=NO04G04420.1|organism=Nannochloropsis oceanica|type=CDS|length=2544bp|location=Sequence derived from alignment at chr4:1197866..1202939+ (Nannochloropsis oceanica)
ATGGGCTCGGTCCTGAATCAGAGGCCAAAGAGCGAGGTTTGCCACGAGCC
TGGATGGTCGTCATCCTCTCGTGGCGGGCGCCGTATTCTCACCACACTCA
TCCCGCGTTGCCCTCCCCTTCACAGGTTCAAGCAAGCCGGCCAAAGCCTT
CGCTTCTCGACCTCGTCGTCTCAAAGCAAACACAGCGGAGCCCTCCCTCG
TCCGTCCTCACAAACTCAACCACCACTTATGGAAGCCTTTCATCGCCGCG
GCATGAAGGTGGCCATGACCCTTGCCCGGTCCTCCGGTGCCAACCCTGCC
GCGCGTATGGCCGTGCCCCAACAGCGGCAGTTCTTCCAGGCAGCTTACAA
TCTGGCCAAGAAAGTCACGCCCAAGATCTCGGCCACCGAGGCGGCTGCCT
TGGATGCAGGGACCGTCGGCTTTGACCGTGATTTGTTTGCAGGAAACCCG
TCCTTGACAGGCCTGAAGAAGAAGTACGACTTAAAGATCACCGCCGAGGA
ACGTGCCTTCTTGGAGAACGAAGTGGAGCAGCTCTGCGCGATGTCCAACG
AGTATGACATGTACAAGAACAAGGACCTTCCCCAGCCGGTCTGGGACTTC
ATCCGTAAGAACGGTTTCCTGGGCATGATTATTGACAAGCAATATGGCGG
GAAGGGTTTCTCCGCCCACGGTCATGCCCTGGTGGTGCAGAAACTGTCGA
CCCGCTCCCAGTCTGTGGGTGTCTCAGTCATGGTGCCCAACTCTCTGGGC
CCCGGTGAGCTGCTCAAGCGTTATGGCACACAAGCCGAAAAGGACTACTA
CCTGCCCAAGCTGGCCAATGGCGAGCTCATCCCCTGCTTCGGCCTGACGG
GCCCCGCCTCCGGGTCGGATGCCGCGGCCATGCGCGACCAGGCGACTGTA
GTGGAGGAAAACGGCGTCTTGGGTGTCCGTGCGACCTTCAAGAAGCGTTA
CATCACCCTGGCACCTGTGGCGGGGTGTGTAGGGCTGGCCGTGCAGTTGA
AGGACCCCAATGGTTTATTGAAGGGGAAGGGCAAGGAAGGCATTTCGATT
TTCTTGCTCGAGCGAGACTTGCCCGGCCTCAGGATGGGACCGAGGCACGA
CCCGCTGTCGGCATTTTTTATGAATGGCACAGTGGAGGGGGAGGATGTAT
TCATCCCCATTGACAAGCTGCTGGGGGGGCAGGAGCGAGCAGGGTACGGG
TGGAACATGTTGATGGACTGCTTGGCCGAGGGACGATCCATCAGTCTCCC
GGCGGGGGCGATCGCAATTGGTAAGTTGTCGGTGACGGCCGTGGGCGCCT
ATGCCCGCATTCGCAAGCAGTTTAAGGTGCCCATTGCGGAGCTGGAGGGC
GTGCAGGAGCACCTGGCGCGGATCGCGGGCCACACTTATGTGATCACGGC
GGCTCAGGGACTGACGAACTCGATGCTGAACCAACACGAGCAGCCGGCGG
TCATCTCGGCCATCATGAAGCAGCAGTGCACGAACCGCGGGCGACAGATT
GTAAACGATGCCATGGATGTCCTGGGTGGGGCTGGCATTTGCATGGGTCC
CAATAATTTTATGGGCGCGAATTACATGGCTACGCCGATTGCGATTACCG
TGGAGGGGGCCAACACACTGACGAGGTCTTTGATCCAGTTCGGGCAGGGC
CTGATGCGCGCACACCCGCACTTGTTGGACGTTGTCAAGGCTGTGCAGAA
GGGGGACGACCTCAAGGGGTTCAACCAGGGGCTGGCTGGGATGTTCTCGC
ATGGGGCGGTGAACGCCACCCGGTCCTTTGGAAAGGCCTTAATTCGCAGC
AGGAGCAAGAGCAATTTCGAAGGGTACTACGAGTCGCAGCTGGGTCGCCT
TGCCTCGGCTTTTGCCATCGCCTCGGATCTGTCCCTCACTATGGGCGGGA
AGATCAAGTTTGCCGAGTCCCTCTCTGGCCGCTATGCCGACGTGTTGTCT
AACCTCTACTTGGGCTATGCCACCCTCTGGTTCCATGGCAAGAACCCCTC
CCAAGGTGGCGACGCCGTGGCGGCCTGGGCCCTGGACAACATACTGGTGG
ATATCCAGGACGCATTTTACGGCATCTCCGAAAATTTCCCCATCCGCCCC
GTGGGATGGGCCATCCAGGCCTTGACCTTCCCCACGGGCAAGACGTACGT
CCGCCCCTCCGACAAGCTGACCACGGAGGTGGCGCAGCTCATCAGCAAGC
CCTCTGGCGTGCGTGACCTGCTCTCCCAGGACATTTACGTGCACAAGGAC
CTGACCGACCGCGTCGCCCTTCTCAACGCCACCCTCCCCAAGGCCGTCAA
GGTGGATGAGATCTACACCAAGCTTCGCAAGGAGAAGCGTACCGCCACGG
CCGAGGAGCAGAAGCTCATCGATGAGGTGGAGGCCGCCCGTGAGATCATT
ATCCAGGTTGACTCCTTCTCGTCGCTGGGCCAGGAGTCGAACATTAAGGG
CTGGAAGACGGAGGATCGCCCCGCGTTGCAGGATATCTACGGTGTGAAAA
AGGCGGCGAAGAACGCGAACATGTCGGAGCAACTGGCTGCGTAA

Synonyms

Publications