NO04G03680.1, NO04G03680.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G03680.1
Unique Name	NO04G03680.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4216
Alignment location	chr4:996564..1000955 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:996564..1000955 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G03680.1 vs.
Match: EWM28693.1 (5-oxoprolinase [Nannochloropsis gaditana])

HSP 1 Score: 2023.1 bits (5240), Expect = 0.000e+0
Identity = 1032/1286 (80.25%), Postives = 1129/1286 (87.79%), Query Frame = 0

Query:    1 MAPAFSFAIDRGGTFTDVFCVLPEGKGHRVLKLLSEDPANYPDAPREGIRRILEKETGVPHPRDQPLDTSRIASIKMGTTVATNALLERKGERFALAITSGFRDLLHIGNQSRPNIFDLKVRKPEVLYETVVEIEERVVLVPESQPSHPDDLLGVTGERIRIEKAVDEAMARKQLQALYDAGFTSVAVVLLHAYTFTAHEVLLGRLAKEIGFRQVSLSSQVMPMVKMVPRGLTTCIDAYLTPVIDAYLQSFKSGFDRGLEGNVKVAFMQSDGGLAPMNAFSGHRAILSGPAGGVVGYAATVFQKDGEGEGGREGQPSIGFDMGGTSTDVSRYDGSFQHVFETTTAGITIQSPQLDISTVAAGGGSRLNFRNGLFVVGPESAGAHPGPVCYRKGGVLALTDANLLLGRVIPKYFPHIFGPREDEPLDAVAVRIAFEALTEEVNAFSAAEAAASATGGAELQYKKKTVDEVAYGFVRVANEAMCRPIRNLTTMRGFDITTHALACFGGAGPQHCCAMAKALGMRRIVVSRFSGVLSAYGIHLADIVVEKQEPAAGLYCPQSRSVLEARLDALEEAAREELQAQGFEPEAVQVERYLNLRFAGTDCALMTTAA-------------------CGSSGGDDG-DYGAAFEANYQREFGFKLTGRDIMVDDVRIRATGHSQSGARQKIAAAAAGEQPIATDYEAVYFEGLGRVQTPLYRAEELKAGFVIPGPAIIMQTISTVVVDPGCAAHVTLEGDFEIVVGEAETKRITTELDPIYLSIFAHRFMGIAEQMGRTLQRTSISVNIKERLDFSCAIFDESGGLVANAPHLPVHLGAMQEAVKYQLKHWGEKGLKEGDVLVSNHPQLAGGSHLPDITVITPVFNEGRIVFFVASRGHHADVGGIAPGSMPSLSKRLEEEGAAIVAFKLVEGGVFQEKGITELLQAPAQVPGSSGTRNLQDNLSDLHAQVAANTQGASLMHSLVAEYGIEVVQAYMQHIQTNAERAVRVMLTAFSTRQQLPLIGTVKAEDFMDDGTPICLAITIDRTQGSAVFDFAGTGPELYGNLNAPPAVTASAVIYCLRCLLPDVDIPLNQGCLVPVEIRIPPSSLLNPSPTAAVVGGNVLTSQRITDVIFRAFGAVAASQGCMNNLTFGYASMGYYETIAGGAGAGPTWHGESGVHTHMTNTRITDPEILERRFPVLLRAFVLRNGSGGRGKHCGGDGVIRELEFRRPLVVSILSERRAFRPYGLEGGEAGARGLNLLTFAKSGINGEGGGRGS-RLVNLGGKNTVQVH 1266
            M+ +FSFAIDRGGTFTDVFCVLP G G RVLKLLSEDPANYPDAPREGIRRILE+ETGVPHPRD+PLDTSRIASIKMGTTVATNALLERKGERFALAIT+GFRDLLHIGNQSRP+IFDLKVRKPEVLYE VVEI+ERVVL  E   S  D  +GVTGER+ +EKA++E +AR+QLQ+LYD+G+ S+AVVLLH+YTF  HE++LGRLA+EIGF+QVSLSSQVMPMVKMVPRGLTTCIDAYLTPVIDAYL SFKSGFD  LE  V+V+FMQSDGGLAPMN FSGH AILSGPAGGVVGYA T   + G  E     Q  IGFDMGGTSTDVSRYDG+FQHVFETTTAGITIQSPQLDISTVAAGGGSRL FRNGLFVVGPESAGAHPGPVCYRKGGVLA+TDAN+LLGRV+P+YFPHIFGPREDEPLD  AV+ AF  LT EVNAF+AAE+  +  GG E+    KT DEVAYGF+RVANEAMCRPIRNLTTMRGFDITTHALACFGGAGPQHCCA+AKALGMRRI+VSRFSGVLSAYGIHLADIVVEKQEPAAG Y  +S S LEARLDALE+AAREEL AQGF  +A++VER+LNLRFAGTDCALMT  +                    GSSG   G DY +AFE+NYQREFGFKL GRD++VDDVR+R TG  QS AR ++A A  GE+P   DY +V+FEG+GRV+TPLY+AE LKAGFV+PGPAI+MQ +STVVV+PGC AHVT EG+FEI+VG  E KRITT LDPIYLSIFAHRFMG+AEQMGRTLQRTSISVNIKERLDFSCA+FDE+GGLVANAPHLPVHLGAMQEAV+YQLKHW  +GL+EGDVLVSNHPQLAGGSHLPDITVITPVF+EGR+VFFVASRGHHADVGG+APGSMP +SKRL+EEGAAIVAFKLVEGGVFQE GI  LL+APA+VPG SG+RNLQDNLSDL AQVAANTQG  LM  L++EYG+ V+QAYMQHIQ NAE+AVR MLT FS  Q+LP +GTV AEDFMDDGTPICL +TIDR +GSAVFDFAGTGPELYGNLNAPPAVTASAVIYCLRCLLPD DIPLNQGCLVPVEI IPPSSLLNPSP+AAVVGGNVLTSQR+TDVIFRAFGAVAASQGCMNNLTFG ASMGYYETIAGGAGAGP+WHGESGVHTHMTNTRITDPEILERRFPV+LR FVLR+ SGG+G + GGDGV+R LEFRRPLVVSILSERRAFRPYGL GG  GARGLNLLTFA       GG + S RLVNLGGKNTVQ H
Sbjct:    1 MSSSFSFAIDRGGTFTDVFCVLP-GNGFRVLKLLSEDPANYPDAPREGIRRILEQETGVPHPRDEPLDTSRIASIKMGTTVATNALLERKGERFALAITAGFRDLLHIGNQSRPSIFDLKVRKPEVLYERVVEIDERVVLAAEDAASDCD-FVGVTGERVCVEKALNEDIARQQLQSLYDSGYRSLAVVLLHSYTFHRHELILGRLAREIGFKQVSLSSQVMPMVKMVPRGLTTCIDAYLTPVIDAYLASFKSGFDARLEERVRVSFMQSDGGLAPMNNFSGHHAILSGPAGGVVGYAVTASGRAGR-ESEEAAQAVIGFDMGGTSTDVSRYDGAFQHVFETTTAGITIQSPQLDISTVAAGGGSRLFFRNGLFVVGPESAGAHPGPVCYRKGGVLAVTDANVLLGRVVPRYFPHIFGPREDEPLDVTAVQAAFADLTGEVNAFAAAESTQAREGGGEVSRVPKTADEVAYGFLRVANEAMCRPIRNLTTMRGFDITTHALACFGGAGPQHCCAIAKALGMRRIIVSRFSGVLSAYGIHLADIVVEKQEPAAGKYDEESLSTLEARLDALEKAAREELVAQGFAEDAIRVERFLNLRFAGTDCALMTARSEEVRTGGRQSGGGEWDGGRLGSSGMSQGRDYRSAFESNYQREFGFKLEGRDVLVDDVRVRVTGRGQSEARFRVAVAGEGEKPRPVDYGSVFFEGIGRVETPLYKAEGLKAGFVVPGPAILMQEVSTVVVEPGCTAHVTSEGNFEILVGAVEEKRITTTLDPIYLSIFAHRFMGVAEQMGRTLQRTSISVNIKERLDFSCALFDETGGLVANAPHLPVHLGAMQEAVRYQLKHWAREGLREGDVLVSNHPQLAGGSHLPDITVITPVFDEGRLVFFVASRGHHADVGGLAPGSMPPMSKRLDEEGAAIVAFKLVEGGVFQEAGIIALLEAPARVPGCSGSRNLQDNLSDLRAQVAANTQGRMLMQGLISEYGLGVIQAYMQHIQDNAEQAVRAMLTRFSLSQELPEVGTVGAEDFMDDGTPICLEVTIDRARGSAVFDFAGTGPELYGNLNAPPAVTASAVIYCLRCLLPDADIPLNQGCLVPVEILIPPSSLLNPSPSAAVVGGNVLTSQRVTDVIFRAFGAVAASQGCMNNLTFGDASMGYYETIAGGAGAGPSWHGESGVHTHMTNTRITDPEILERRFPVILRQFVLRDDSGGKGVYAGGDGVVRALEFRRPLVVSILSERRAFRPYGLAGGGDGARGLNLLTFA-------GGAKSSRRLVNLGGKNTVQRH 1276

The following BLAST results are available for this feature:

BLAST of NO04G03680.1 vs.

BLAST of NO04G03680.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28693.1	0.000e+0	80.25	5-oxoprolinase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G03680	NO04G03680	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G03680.1	NO04G03680.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G03680.1.cds1	NO04G03680.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03680.1.cds2	NO04G03680.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03680.1.cds3	NO04G03680.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:996564..1000955-
coding sequence from alignment at chr4:996564..1000955-

mRNA sequence

>NO04G03680.1 ID=NO04G03680.1|Name=NO04G03680.1|organism=Nannochloropsis oceanica|type=mRNA|length=4216bp
AACAGCACCACTCCCGCTATAGCATCATGGCTCCTGCCTTCAGCTTCGCC
ATCGACCGTGGGGGCACGTTCACCGACGTCTTTTGCGTCCTGCCTGAAGG
AAAGGGCCACCGTGTTTTGAAGTTGTTGAGTGAAGACCCTGCCAACTACC
CAGATGCGCCGCGAGAGGGTATCCGTCGTATTCTGGAGAAAGAAACAGGC
GTGCCGCATCCACGCGACCAACCTCTCGACACTTCGCGTATCGCCTCAAT
CAAGATGGGCACCACCGTCGCCACCAACGCCCTCCTCGAACGGAAAGGAG
AACGCTTCGCTTTGGCTATCACAAGTGGATTTCGCGATCTGCTCCATATT
GGCAATCAGTCCCGGCCCAACATATTTGACCTCAAAGTGCGTAAACCCGA
AGTCCTTTACGAAACCGTCGTTGAGATCGAGGAGCGTGTTGTGCTAGTGC
CCGAGAGTCAGCCGTCCCATCCCGACGATTTGCTGGGCGTGACAGGGGAG
CGGATACGCATTGAAAAGGCCGTGGATGAAGCGATGGCCCGGAAACAGCT
GCAGGCACTGTATGATGCAGGTTTCACCAGCGTGGCTGTTGTTTTGTTGC
ATGCCTACACTTTTACTGCTCATGAGGTGCTGTTGGGGAGGCTGGCCAAG
GAGATTGGTTTCAGGCAAGTCTCGCTCTCATCGCAGGTGATGCCGATGGT
AAAGATGGTACCGAGAGGATTAACTACTTGTATTGATGCCTATCTTACCC
CGGTCATCGATGCGTACTTGCAGTCGTTCAAGTCAGGGTTTGACAGGGGC
TTAGAAGGGAACGTCAAGGTGGCATTTATGCAGAGTGATGGAGGTTTGGC
GCCCATGAATGCGTTTTCGGGCCATCGGGCTATTTTGTCAGGGCCAGCAG
GAGGGGTGGTGGGGTATGCAGCAACGGTTTTTCAGAAGGATGGAGAGGGG
GAGGGAGGGAGGGAAGGACAGCCTTCGATTGGGTTTGATATGGGCGGGAC
TTCAACGGATGTGTCGAGGTATGACGGCTCGTTTCAGCACGTGTTTGAGA
CGACGACAGCGGGGATTACCATCCAGTCCCCTCAGTTGGATATAAGTACC
GTGGCGGCCGGGGGAGGGAGCCGGTTGAATTTCCGCAATGGCCTATTTGT
GGTCGGTCCCGAGAGCGCCGGGGCGCATCCAGGGCCTGTTTGCTACCGGA
AAGGTGGGGTTTTAGCCTTGACAGATGCGAACTTATTGCTGGGACGTGTG
ATTCCTAAGTATTTTCCTCATATTTTTGGTCCACGGGAAGACGAGCCTTT
GGATGCCGTGGCGGTGCGGATAGCTTTTGAGGCTTTGACTGAGGAAGTGA
ATGCATTCAGTGCTGCGGAAGCTGCTGCTTCTGCCACTGGTGGCGCAGAG
CTGCAGTACAAGAAGAAGACAGTGGATGAAGTGGCGTATGGGTTTGTACG
GGTGGCGAACGAGGCGATGTGTCGGCCGATTCGGAATTTGACGACGATGC
GAGGGTTCGATATTACTACGCATGCCCTCGCTTGTTTTGGGGGGGCTGGT
CCACAGCATTGTTGTGCGATGGCCAAAGCGCTGGGCATGCGGAGGATTGT
TGTGAGCCGTTTCTCCGGCGTGTTGTCGGCATATGGCATTCATTTGGCAG
ATATCGTTGTGGAGAAGCAGGAGCCGGCGGCAGGGTTGTATTGTCCTCAA
TCGAGATCTGTATTGGAAGCTCGCTTGGATGCCCTAGAGGAAGCAGCGAG
GGAAGAGTTACAGGCGCAGGGCTTTGAACCAGAGGCTGTGCAGGTGGAAC
GATATTTGAATCTTCGGTTTGCGGGAACGGACTGTGCGTTGATGACGACG
GCGGCATGTGGCAGCAGTGGTGGTGACGATGGTGATTACGGCGCTGCTTT
CGAGGCCAACTACCAGCGGGAGTTTGGGTTTAAGCTAACTGGACGGGATA
TAATGGTGGATGATGTCCGTATCCGCGCCACGGGGCACAGTCAGTCAGGG
GCCCGCCAAAAAATAGCTGCAGCAGCAGCAGGTGAGCAGCCTATCGCTAC
GGATTACGAAGCTGTGTATTTTGAAGGGCTTGGGCGGGTGCAAACGCCCT
TGTACAGAGCTGAGGAGCTTAAGGCAGGGTTTGTCATACCGGGCCCTGCG
ATCATTATGCAGACCATTTCGACTGTCGTTGTTGACCCGGGTTGTGCTGC
TCATGTGACACTCGAGGGTGATTTTGAGATAGTGGTGGGGGAGGCGGAGA
CAAAGAGGATTACCACTGAATTGGACCCGATTTATCTGTCAATCTTTGCG
CATCGCTTTATGGGTATTGCGGAGCAAATGGGACGGACATTGCAGAGGAC
CTCGATAAGTGTGAATATCAAAGAGCGGCTTGATTTTAGCTGCGCGATTT
TTGATGAGTCAGGGGGTCTGGTTGCCAATGCACCACATTTACCCGTCCAT
TTGGGCGCGATGCAGGAGGCTGTGAAGTATCAATTGAAACATTGGGGAGA
GAAAGGCTTGAAGGAGGGAGATGTGTTGGTATCGAACCATCCACAATTGG
CGGGAGGCTCGCATTTGCCTGACATTACGGTGATTACGCCGGTGTTTAAT
GAAGGGAGAATTGTATTTTTTGTGGCAAGCCGTGGACATCATGCTGATGT
GGGTGGCATTGCCCCTGGGTCGATGCCGTCACTGTCGAAGCGATTGGAGG
AGGAGGGGGCGGCGATTGTGGCTTTTAAGTTGGTGGAAGGTGGAGTGTTC
CAAGAAAAGGGAATCACCGAGTTGCTTCAGGCTCCGGCCCAAGTGCCGGG
TAGTAGTGGCACACGTAATTTACAAGACAATTTGAGTGATCTACACGCAC
AAGTGGCAGCTAATACACAAGGGGCAAGTTTGATGCATTCTCTGGTAGCA
GAATATGGGATTGAGGTGGTCCAAGCGTACATGCAGCACATCCAAACCAA
CGCCGAGCGGGCCGTCCGCGTGATGCTCACCGCTTTTTCCACCCGTCAGC
AGTTGCCGCTGATTGGAACAGTCAAAGCGGAAGATTTTATGGATGATGGC
ACGCCGATCTGCTTAGCGATTACAATTGATCGGACGCAGGGCTCGGCGGT
ATTTGATTTTGCGGGCACGGGGCCTGAGCTGTATGGGAATTTGAATGCCC
CTCCTGCTGTGACGGCTTCTGCGGTCATTTATTGCTTGCGTTGCCTCCTG
CCCGACGTGGATATTCCTTTGAATCAAGGTTGTTTGGTGCCGGTTGAGAT
ACGTATCCCGCCTTCAAGTCTGTTGAACCCAAGCCCGACCGCCGCGGTGG
TTGGAGGCAACGTATTGACTTCCCAGAGGATAACTGACGTGATTTTTCGA
GCGTTTGGCGCCGTGGCTGCTTCGCAAGGATGCATGAATAACTTGACTTT
CGGATATGCTTCTATGGGCTACTATGAGACAATCGCGGGAGGGGCAGGGG
CAGGGCCAACGTGGCATGGGGAGAGTGGCGTGCATACTCATATGACGAAC
ACACGGATTACGGATCCAGAAATTTTGGAGAGGCGGTTTCCGGTACTATT
GCGTGCTTTTGTATTACGGAATGGCTCGGGGGGAAGGGGGAAGCATTGTG
GTGGGGACGGGGTGATACGTGAGTTGGAGTTTCGACGGCCGTTAGTTGTG
AGTATCTTGTCGGAGCGGCGGGCCTTTCGACCGTACGGGCTGGAGGGGGG
AGAGGCAGGGGCACGGGGCTTGAATTTGTTGACTTTTGCCAAGAGTGGGA
TAAACGGAGAAGGAGGAGGAAGAGGGAGCAGGCTGGTAAATTTGGGGGGC
AAGAACACGGTGCAGGTGCATGCAGGGGATGTCTTGACAATTTACACCCC
GGGTGGGGGGGGGTTTGGGGTGGGCTCGGGGGGAGAGGAAGAGGAGGGTG
GGGGGGAAAGGAGACCGGTCAAGCGGCGAGGTGTCGTGCATCATCTAGGT
AATAAGGGTGGTGGTAGTTTGGGCCAATACAAAATTGCGCAAGAGTCGGC
TTAAGAGGTATTGGTGTGGAGAAATGGGACGCCCGGGTATATGAGGGATT
GAAACGACGTGGATGGAAGAAGGCGGGGGATTGACCAGTAAGATTTAAGG
TGTGTAGTTCATCGTGAATGCGAATTGTAATTTGTAGGTCATGAACATCG
GTAACGTATGGATCCCCCCCCAAAAGAAGCAAGAACAAGTAGCCATGAAG
AGAATTTGGACGTTGG

protein sequence of NO04G03680.1

>NO04G03680.1-protein ID=NO04G03680.1-protein|Name=NO04G03680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1326bp
MAPAFSFAIDRGGTFTDVFCVLPEGKGHRVLKLLSEDPANYPDAPREGIR
RILEKETGVPHPRDQPLDTSRIASIKMGTTVATNALLERKGERFALAITS
GFRDLLHIGNQSRPNIFDLKVRKPEVLYETVVEIEERVVLVPESQPSHPD
DLLGVTGERIRIEKAVDEAMARKQLQALYDAGFTSVAVVLLHAYTFTAHE
VLLGRLAKEIGFRQVSLSSQVMPMVKMVPRGLTTCIDAYLTPVIDAYLQS
FKSGFDRGLEGNVKVAFMQSDGGLAPMNAFSGHRAILSGPAGGVVGYAAT
VFQKDGEGEGGREGQPSIGFDMGGTSTDVSRYDGSFQHVFETTTAGITIQ
SPQLDISTVAAGGGSRLNFRNGLFVVGPESAGAHPGPVCYRKGGVLALTD
ANLLLGRVIPKYFPHIFGPREDEPLDAVAVRIAFEALTEEVNAFSAAEAA
ASATGGAELQYKKKTVDEVAYGFVRVANEAMCRPIRNLTTMRGFDITTHA
LACFGGAGPQHCCAMAKALGMRRIVVSRFSGVLSAYGIHLADIVVEKQEP
AAGLYCPQSRSVLEARLDALEEAAREELQAQGFEPEAVQVERYLNLRFAG
TDCALMTTAACGSSGGDDGDYGAAFEANYQREFGFKLTGRDIMVDDVRIR
ATGHSQSGARQKIAAAAAGEQPIATDYEAVYFEGLGRVQTPLYRAEELKA
GFVIPGPAIIMQTISTVVVDPGCAAHVTLEGDFEIVVGEAETKRITTELD
PIYLSIFAHRFMGIAEQMGRTLQRTSISVNIKERLDFSCAIFDESGGLVA
NAPHLPVHLGAMQEAVKYQLKHWGEKGLKEGDVLVSNHPQLAGGSHLPDI
TVITPVFNEGRIVFFVASRGHHADVGGIAPGSMPSLSKRLEEEGAAIVAF
KLVEGGVFQEKGITELLQAPAQVPGSSGTRNLQDNLSDLHAQVAANTQGA
SLMHSLVAEYGIEVVQAYMQHIQTNAERAVRVMLTAFSTRQQLPLIGTVK
AEDFMDDGTPICLAITIDRTQGSAVFDFAGTGPELYGNLNAPPAVTASAV
IYCLRCLLPDVDIPLNQGCLVPVEIRIPPSSLLNPSPTAAVVGGNVLTSQ
RITDVIFRAFGAVAASQGCMNNLTFGYASMGYYETIAGGAGAGPTWHGES
GVHTHMTNTRITDPEILERRFPVLLRAFVLRNGSGGRGKHCGGDGVIREL
EFRRPLVVSILSERRAFRPYGLEGGEAGARGLNLLTFAKSGINGEGGGRG
SRLVNLGGKNTVQVHAGDVLTIYTPGGGGFGVGSGGEEEEGGGERRPVKR
RGVVHHLGNKGGGSLGQYKIAQESA*

mRNA from alignment at chr4:996564..1000955-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G03680.1 ID=NO04G03680.1|Name=NO04G03680.1|organism=Nannochloropsis oceanica|type=mRNA|length=4392bp|location=Sequence derived from alignment at chr4:996564..1000955- (Nannochloropsis oceanica)
AACAGCACCACTCCCGCTATAGCATCATGGCTCCTGCCTTCAGCTTCGCC
ATCGACCGTGGGGGCACGTTCACCGACGTCTTTTGCGTCCTGCCTGGTAA
GTCTTTCCCGGGTAGGGCAACCTCCCCTTCCGCCCCCGACCTCTCATACA
CAATCACAAACCCGTACAGAAGGAAAGGGCCACCGTGTTTTGAAGTTGTT
GAGTGAAGACCCTGCCAACTACCCAGATGCGCCGCGAGAGGTGAGGAAAG
AAAAGGGACGACGGACCGAAGGAGGGGAAGGCAGACAGTCTTATCTCAAT
AAGCCAGAGACCTCATAATACATACTTTCTCTTTGAAACCCAGGGTATCC
GTCGTATTCTGGAGAAAGAAACAGGCGTGCCGCATCCACGCGACCAACCT
CTCGACACTTCGCGTATCGCCTCAATCAAGATGGGCACCACCGTCGCCAC
CAACGCCCTCCTCGAACGGAAAGGAGAACGCTTCGCTTTGGCTATCACAA
GTGGATTTCGCGATCTGCTCCATATTGGCAATCAGTCCCGGCCCAACATA
TTTGACCTCAAAGTGCGTAAACCCGAAGTCCTTTACGAAACCGTCGTTGA
GATCGAGGAGCGTGTTGTGCTAGTGCCCGAGAGTCAGCCGTCCCATCCCG
ACGATTTGCTGGGCGTGACAGGGGAGCGGATACGCATTGAAAAGGCCGTG
GATGAAGCGATGGCCCGGAAACAGCTGCAGGCACTGTATGATGCAGGTTT
CACCAGCGTGGCTGTTGTTTTGTTGCATGCCTACACTTTTACTGCTCATG
AGGTGCTGTTGGGGAGGCTGGCCAAGGAGATTGGTTTCAGGCAAGTCTCG
CTCTCATCGCAGGTGATGCCGATGGTAAAGATGGTACCGAGAGGATTAAC
TACTTGTATTGATGCCTATCTTACCCCGGTCATCGATGCGTACTTGCAGT
CGTTCAAGTCAGGGTTTGACAGGGGCTTAGAAGGGAACGTCAAGGTGGCA
TTTATGCAGAGTGATGGAGGTTTGGCGCCCATGAATGCGTTTTCGGGCCA
TCGGGCTATTTTGTCAGGGCCAGCAGGAGGGGTGGTGGGGTATGCAGCAA
CGGTTTTTCAGAAGGATGGAGAGGGGGAGGGAGGGAGGGAAGGACAGCCT
TCGATTGGGTTTGATATGGGCGGGACTTCAACGGATGTGTCGAGGTATGA
CGGCTCGTTTCAGCACGTGTTTGAGACGACGACAGCGGGGATTACCATCC
AGTCCCCTCAGTTGGATATAAGTACCGTGGCGGCCGGGGGAGGGAGCCGG
TTGAATTTCCGCAATGGCCTATTTGTGGTCGGTCCCGAGAGCGCCGGGGC
GCATCCAGGGCCTGTTTGCTACCGGAAAGGTGGGGTTTTAGCCTTGACAG
ATGCGAACTTATTGCTGGGACGTGTGATTCCTAAGTATTTTCCTCATATT
TTTGGTCCACGGGAAGACGAGCCTTTGGATGCCGTGGCGGTGCGGATAGC
TTTTGAGGCTTTGACTGAGGAAGTGAATGCATTCAGTGCTGCGGAAGCTG
CTGCTTCTGCCACTGGTGGCGCAGAGCTGCAGTACAAGAAGAAGACAGTG
GATGAAGTGGCGTATGGGTTTGTACGGGTGGCGAACGAGGCGATGTGTCG
GCCGATTCGGAATTTGACGACGATGCGAGGGTTCGATATTACTACGCATG
CCCTCGCTTGTTTTGGGGGGGCTGGTCCACAGCATTGTTGTGCGATGGCC
AAAGCGCTGGGCATGCGGAGGATTGTTGTGAGCCGTTTCTCCGGCGTGTT
GTCGGCATATGGCATTCATTTGGCAGATATCGTTGTGGAGAAGCAGGAGC
CGGCGGCAGGGTTGTATTGTCCTCAATCGAGATCTGTATTGGAAGCTCGC
TTGGATGCCCTAGAGGAAGCAGCGAGGGAAGAGTTACAGGCGCAGGGCTT
TGAACCAGAGGCTGTGCAGGTGGAACGATATTTGAATCTTCGGTTTGCGG
GAACGGACTGTGCGTTGATGACGACGGCGGCATGTGGCAGCAGTGGTGGT
GACGATGGTGATTACGGCGCTGCTTTCGAGGCCAACTACCAGCGGGAGTT
TGGGTTTAAGCTAACTGGACGGGATATAATGGTGGATGATGTCCGTATCC
GCGCCACGGGGCACAGTCAGTCAGGGGCCCGCCAAAAAATAGCTGCAGCA
GCAGCAGGTGAGCAGCCTATCGCTACGGATTACGAAGCTGTGTATTTTGA
AGGGCTTGGGCGGGTGCAAACGCCCTTGTACAGAGCTGAGGAGCTTAAGG
CAGGGTTTGTCATACCGGGCCCTGCGATCATTATGCAGACCATTTCGACT
GTCGTTGTTGACCCGGGTTGTGCTGCTCATGTGACACTCGAGGGTGATTT
TGAGATAGTGGTGGGGGAGGCGGAGACAAAGAGGATTACCACTGAATTGG
ACCCGATTTATCTGTCAATCTTTGCGCATCGCTTTATGGGTATTGCGGAG
CAAATGGGACGGACATTGCAGAGGACCTCGATAAGTGTGAATATCAAAGA
GCGGCTTGATTTTAGCTGCGCGATTTTTGATGAGTCAGGGGGTCTGGTTG
CCAATGCACCACATTTACCCGTCCATTTGGGCGCGATGCAGGAGGCTGTG
AAGTATCAATTGAAACATTGGGGAGAGAAAGGCTTGAAGGAGGGAGATGT
GTTGGTATCGAACCATCCACAATTGGCGGGAGGCTCGCATTTGCCTGACA
TTACGGTGATTACGCCGGTGTTTAATGAAGGGAGAATTGTATTTTTTGTG
GCAAGCCGTGGACATCATGCTGATGTGGGTGGCATTGCCCCTGGGTCGAT
GCCGTCACTGTCGAAGCGATTGGAGGAGGAGGGGGCGGCGATTGTGGCTT
TTAAGTTGGTGGAAGGTGGAGTGTTCCAAGAAAAGGGAATCACCGAGTTG
CTTCAGGCTCCGGCCCAAGTGCCGGGTAGTAGTGGCACACGTAATTTACA
AGACAATTTGAGTGATCTACACGCACAAGTGGCAGCTAATACACAAGGGG
CAAGTTTGATGCATTCTCTGGTAGCAGAATATGGGATTGAGGTGGTCCAA
GCGTACATGCAGCACATCCAAACCAACGCCGAGCGGGCCGTCCGCGTGAT
GCTCACCGCTTTTTCCACCCGTCAGCAGTTGCCGCTGATTGGAACAGTCA
AAGCGGAAGATTTTATGGATGATGGCACGCCGATCTGCTTAGCGATTACA
ATTGATCGGACGCAGGGCTCGGCGGTATTTGATTTTGCGGGCACGGGGCC
TGAGCTGTATGGGAATTTGAATGCCCCTCCTGCTGTGACGGCTTCTGCGG
TCATTTATTGCTTGCGTTGCCTCCTGCCCGACGTGGATATTCCTTTGAAT
CAAGGTTGTTTGGTGCCGGTTGAGATACGTATCCCGCCTTCAAGTCTGTT
GAACCCAAGCCCGACCGCCGCGGTGGTTGGAGGCAACGTATTGACTTCCC
AGAGGATAACTGACGTGATTTTTCGAGCGTTTGGCGCCGTGGCTGCTTCG
CAAGGATGCATGAATAACTTGACTTTCGGATATGCTTCTATGGGCTACTA
TGAGACAATCGCGGGAGGGGCAGGGGCAGGGCCAACGTGGCATGGGGAGA
GTGGCGTGCATACTCATATGACGAACACACGGATTACGGATCCAGAAATT
TTGGAGAGGCGGTTTCCGGTACTATTGCGTGCTTTTGTATTACGGAATGG
CTCGGGGGGAAGGGGGAAGCATTGTGGTGGGGACGGGGTGATACGTGAGT
TGGAGTTTCGACGGCCGTTAGTTGTGAGTATCTTGTCGGAGCGGCGGGCC
TTTCGACCGTACGGGCTGGAGGGGGGAGAGGCAGGGGCACGGGGCTTGAA
TTTGTTGACTTTTGCCAAGAGTGGGATAAACGGAGAAGGAGGAGGAAGAG
GGAGCAGGCTGGTAAATTTGGGGGGCAAGAACACGGTGCAGGTGCATGCA
GGGGATGTCTTGACAATTTACACCCCGGGTGGGGGGGGGTTTGGGGTGGG
CTCGGGGGGAGAGGAAGAGGAGGGTGGGGGGGAAAGGAGACCGGTCAAGC
GGCGAGGTGTCGTGCATCATCTAGGTAATAAGGGTGGTGGTAGTTTGGGC
CAATACAAAATTGCGCAAGAGTCGGCTTAAGAGGTATTGGTGTGGAGAAA
TGGGACGCCCGGGTATATGAGGGATTGAAACGACGTGGATGGAAGAAGGC
GGGGGATTGACCAGTAAGATTTAAGGTGTGTAGTTCATCGTGAATGCGAA
TTGTAATTTGTAGGTCATGAACATCGGTAACGTATGGATCCCCCCCCAAA
AGAAGCAAGAACAAGTAGCCATGAAGAGAATTTGGACGTTGG

Coding sequence (CDS) from alignment at chr4:996564..1000955-

>NO04G03680.1 ID=NO04G03680.1|Name=NO04G03680.1|organism=Nannochloropsis oceanica|type=CDS|length=3978bp|location=Sequence derived from alignment at chr4:996564..1000955- (Nannochloropsis oceanica)
ATGGCTCCTGCCTTCAGCTTCGCCATCGACCGTGGGGGCACGTTCACCGA
CGTCTTTTGCGTCCTGCCTGAAGGAAAGGGCCACCGTGTTTTGAAGTTGT
TGAGTGAAGACCCTGCCAACTACCCAGATGCGCCGCGAGAGGGTATCCGT
CGTATTCTGGAGAAAGAAACAGGCGTGCCGCATCCACGCGACCAACCTCT
CGACACTTCGCGTATCGCCTCAATCAAGATGGGCACCACCGTCGCCACCA
ACGCCCTCCTCGAACGGAAAGGAGAACGCTTCGCTTTGGCTATCACAAGT
GGATTTCGCGATCTGCTCCATATTGGCAATCAGTCCCGGCCCAACATATT
TGACCTCAAAGTGCGTAAACCCGAAGTCCTTTACGAAACCGTCGTTGAGA
TCGAGGAGCGTGTTGTGCTAGTGCCCGAGAGTCAGCCGTCCCATCCCGAC
GATTTGCTGGGCGTGACAGGGGAGCGGATACGCATTGAAAAGGCCGTGGA
TGAAGCGATGGCCCGGAAACAGCTGCAGGCACTGTATGATGCAGGTTTCA
CCAGCGTGGCTGTTGTTTTGTTGCATGCCTACACTTTTACTGCTCATGAG
GTGCTGTTGGGGAGGCTGGCCAAGGAGATTGGTTTCAGGCAAGTCTCGCT
CTCATCGCAGGTGATGCCGATGGTAAAGATGGTACCGAGAGGATTAACTA
CTTGTATTGATGCCTATCTTACCCCGGTCATCGATGCGTACTTGCAGTCG
TTCAAGTCAGGGTTTGACAGGGGCTTAGAAGGGAACGTCAAGGTGGCATT
TATGCAGAGTGATGGAGGTTTGGCGCCCATGAATGCGTTTTCGGGCCATC
GGGCTATTTTGTCAGGGCCAGCAGGAGGGGTGGTGGGGTATGCAGCAACG
GTTTTTCAGAAGGATGGAGAGGGGGAGGGAGGGAGGGAAGGACAGCCTTC
GATTGGGTTTGATATGGGCGGGACTTCAACGGATGTGTCGAGGTATGACG
GCTCGTTTCAGCACGTGTTTGAGACGACGACAGCGGGGATTACCATCCAG
TCCCCTCAGTTGGATATAAGTACCGTGGCGGCCGGGGGAGGGAGCCGGTT
GAATTTCCGCAATGGCCTATTTGTGGTCGGTCCCGAGAGCGCCGGGGCGC
ATCCAGGGCCTGTTTGCTACCGGAAAGGTGGGGTTTTAGCCTTGACAGAT
GCGAACTTATTGCTGGGACGTGTGATTCCTAAGTATTTTCCTCATATTTT
TGGTCCACGGGAAGACGAGCCTTTGGATGCCGTGGCGGTGCGGATAGCTT
TTGAGGCTTTGACTGAGGAAGTGAATGCATTCAGTGCTGCGGAAGCTGCT
GCTTCTGCCACTGGTGGCGCAGAGCTGCAGTACAAGAAGAAGACAGTGGA
TGAAGTGGCGTATGGGTTTGTACGGGTGGCGAACGAGGCGATGTGTCGGC
CGATTCGGAATTTGACGACGATGCGAGGGTTCGATATTACTACGCATGCC
CTCGCTTGTTTTGGGGGGGCTGGTCCACAGCATTGTTGTGCGATGGCCAA
AGCGCTGGGCATGCGGAGGATTGTTGTGAGCCGTTTCTCCGGCGTGTTGT
CGGCATATGGCATTCATTTGGCAGATATCGTTGTGGAGAAGCAGGAGCCG
GCGGCAGGGTTGTATTGTCCTCAATCGAGATCTGTATTGGAAGCTCGCTT
GGATGCCCTAGAGGAAGCAGCGAGGGAAGAGTTACAGGCGCAGGGCTTTG
AACCAGAGGCTGTGCAGGTGGAACGATATTTGAATCTTCGGTTTGCGGGA
ACGGACTGTGCGTTGATGACGACGGCGGCATGTGGCAGCAGTGGTGGTGA
CGATGGTGATTACGGCGCTGCTTTCGAGGCCAACTACCAGCGGGAGTTTG
GGTTTAAGCTAACTGGACGGGATATAATGGTGGATGATGTCCGTATCCGC
GCCACGGGGCACAGTCAGTCAGGGGCCCGCCAAAAAATAGCTGCAGCAGC
AGCAGGTGAGCAGCCTATCGCTACGGATTACGAAGCTGTGTATTTTGAAG
GGCTTGGGCGGGTGCAAACGCCCTTGTACAGAGCTGAGGAGCTTAAGGCA
GGGTTTGTCATACCGGGCCCTGCGATCATTATGCAGACCATTTCGACTGT
CGTTGTTGACCCGGGTTGTGCTGCTCATGTGACACTCGAGGGTGATTTTG
AGATAGTGGTGGGGGAGGCGGAGACAAAGAGGATTACCACTGAATTGGAC
CCGATTTATCTGTCAATCTTTGCGCATCGCTTTATGGGTATTGCGGAGCA
AATGGGACGGACATTGCAGAGGACCTCGATAAGTGTGAATATCAAAGAGC
GGCTTGATTTTAGCTGCGCGATTTTTGATGAGTCAGGGGGTCTGGTTGCC
AATGCACCACATTTACCCGTCCATTTGGGCGCGATGCAGGAGGCTGTGAA
GTATCAATTGAAACATTGGGGAGAGAAAGGCTTGAAGGAGGGAGATGTGT
TGGTATCGAACCATCCACAATTGGCGGGAGGCTCGCATTTGCCTGACATT
ACGGTGATTACGCCGGTGTTTAATGAAGGGAGAATTGTATTTTTTGTGGC
AAGCCGTGGACATCATGCTGATGTGGGTGGCATTGCCCCTGGGTCGATGC
CGTCACTGTCGAAGCGATTGGAGGAGGAGGGGGCGGCGATTGTGGCTTTT
AAGTTGGTGGAAGGTGGAGTGTTCCAAGAAAAGGGAATCACCGAGTTGCT
TCAGGCTCCGGCCCAAGTGCCGGGTAGTAGTGGCACACGTAATTTACAAG
ACAATTTGAGTGATCTACACGCACAAGTGGCAGCTAATACACAAGGGGCA
AGTTTGATGCATTCTCTGGTAGCAGAATATGGGATTGAGGTGGTCCAAGC
GTACATGCAGCACATCCAAACCAACGCCGAGCGGGCCGTCCGCGTGATGC
TCACCGCTTTTTCCACCCGTCAGCAGTTGCCGCTGATTGGAACAGTCAAA
GCGGAAGATTTTATGGATGATGGCACGCCGATCTGCTTAGCGATTACAAT
TGATCGGACGCAGGGCTCGGCGGTATTTGATTTTGCGGGCACGGGGCCTG
AGCTGTATGGGAATTTGAATGCCCCTCCTGCTGTGACGGCTTCTGCGGTC
ATTTATTGCTTGCGTTGCCTCCTGCCCGACGTGGATATTCCTTTGAATCA
AGGTTGTTTGGTGCCGGTTGAGATACGTATCCCGCCTTCAAGTCTGTTGA
ACCCAAGCCCGACCGCCGCGGTGGTTGGAGGCAACGTATTGACTTCCCAG
AGGATAACTGACGTGATTTTTCGAGCGTTTGGCGCCGTGGCTGCTTCGCA
AGGATGCATGAATAACTTGACTTTCGGATATGCTTCTATGGGCTACTATG
AGACAATCGCGGGAGGGGCAGGGGCAGGGCCAACGTGGCATGGGGAGAGT
GGCGTGCATACTCATATGACGAACACACGGATTACGGATCCAGAAATTTT
GGAGAGGCGGTTTCCGGTACTATTGCGTGCTTTTGTATTACGGAATGGCT
CGGGGGGAAGGGGGAAGCATTGTGGTGGGGACGGGGTGATACGTGAGTTG
GAGTTTCGACGGCCGTTAGTTGTGAGTATCTTGTCGGAGCGGCGGGCCTT
TCGACCGTACGGGCTGGAGGGGGGAGAGGCAGGGGCACGGGGCTTGAATT
TGTTGACTTTTGCCAAGAGTGGGATAAACGGAGAAGGAGGAGGAAGAGGG
AGCAGGCTGGTAAATTTGGGGGGCAAGAACACGGTGCAGGTGCATGCAGG
GGATGTCTTGACAATTTACACCCCGGGTGGGGGGGGGTTTGGGGTGGGCT
CGGGGGGAGAGGAAGAGGAGGGTGGGGGGGAAAGGAGACCGGTCAAGCGG
CGAGGTGTCGTGCATCATCTAGGTAATAAGGGTGGTGGTAGTTTGGGCCA
ATACAAAATTGCGCAAGAGTCGGCTTAA

Synonyms

Publications