NO04G03420.3, NO04G03420.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G03420.3
Unique Name	NO04G03420.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3291
Alignment location	chr4:938027..942406 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:938027..942406 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G03420.3 vs.
Match: EWM28765.1 (unc-45 family protein [Nannochloropsis gaditana])

HSP 1 Score: 612.8 bits (1579), Expect = 1.900e-171
Identity = 406/1047 (38.78%), Postives = 591/1047 (56.45%), Query Frame = 0

Query:   17 MEVLKQRGNALYAQKKYDEAIKAYDEAIASLSVAAGSSSSSDEKEVHENVKEISKLRGTLLANRAACYLQTKRWEACILDASEALESDRQHVKALYRRAQAYEALGTFEKAFQDLRLAVNLDPNSQELVRATHRLREATQQQESRRQSSPVAQLLARLRKGNFESTGTISRADAWKGLIGLTSEDGAAALDLLRQQGGGIRFVEACIHNTD----LESERVLALRLLAASCQHGVFVKEAFTTSCDTDTAGNYFLQSLVNVLGEGSKVRTEKEERAEEEIASVLVLSFIRMVKEGKGHVQVLKPAIQCWVAALSHRQGTIQKLGLEALLWWSAECTTAKNPESASLLVGACLAPLVRLFEDARESSTFSMRLNATHLLGRIFGCLLGQEKGKERVKTLATELLMTTTTLKVLAERKLELRMLLVLALFNADASLGCWVLAEEETDAAVRRLLASGGADQQIVVAEVFNRASTTETGRACLRPYVLDHTLVCLMKTSGAPFEARVAAAAAFTKLGLAAKTLPSTSTELTDLLNIASSGLEQATACLSSPSPSFDGTRLRTSAIEGSVVEILSCLATRTTLKRELTFGSNRCKACIRLLLAFVQQHIDEGSRTSTITSTTSITK-TTINSICSISSSSGAYDKVWYGVAFVLASLTLSNDELRKEALREKGIAPEEFEQLRKIQEMQQLVRQDWNVDNHELSSCAFFKGNFNELFIHTHGRAHVQQEGSEVDIIEAADPPEDVESRVKELVRLNAIRALSRLLSFQGLSPLAQEQAVTALVQIATVPEVRGRLILEGGYNACLSIAKKGAKSMETTRIKSLHALAKCLVTTNPKMLSDRQRLAPIAGLLWLCRHPMVTYLQQFESLLALTNLASHEEDCVEAILSNQGLKCLLSMQFSEHLLVRRAATEALCNMVYHPHVLASLRNPDTLKLWLALAEDYEGDLLTARAAAGGLAIASGDEEMASGIVEVPIMGLSVWRTLLSSGDSDLIHRAAVAIRSFTRFKKTQQALVREGWLLSALEEASAGAGKPENLQQLMQAIIAEVGQLLK 1059
            ME LK+RGNALY +KK D+A++AYDEA+    VA G    +DE E  +  K I +LR  + ANRAACYLQ  R   CI DA+ AL S+  +VKALYRRAQAY  LG    AFQDLRLA++LDP                        +  + +   R+R+    S      +     L  L + D A      ++Q           + TD    L S R LALRLLAA  +H  F+++AF+   +       F +   ++L    K +   EE A  EIA+    +FIR+ +  +   Q L  AI CW+  L+HR+ T Q++GL +LL WSA C   K+   + LL       L+R  ED  +S    +RL A   +GR F  LL   KG + VK+  + +L  +   ++ A RK EL +L+ L+L+ ADASLGCW+ +     A  R  +       Q  +A++ N+A+ +  GR C+R + ++  ++ +++++ AP EARVAAA+AFTKL +A+K +P  S+ELTD+LN+ S GL+         S +   T +    +  S VEI+S L TRT  K EL FGS+RC AC+  LL    + +D+ +   TI  +T+I +  +I+++C          K  YGVAF +ASLTL+N+E++ +AL+E GI       + + + +Q+++R                             +  + Q   E D+ +  D  +DVE R++ELV+ N I  + RL+S   +S    +Q  TAL+ IAT+P +RG+ I +GGYN CL +AK+  + +E TR+KS+ ALAKCL+TT+PK+L+  QR API  L+ LCR+   T LQQFES LALTNLAS+ ++C+++I  N G++   S+QFSE  LVRRAATEALCNMV HP VLA L  P+TLK WL+LAEDY  DL  +RAAAGGLA+AS DEE+   +  +  + L+ W +LL SG++ LIHRAA AI+    F  T++ L ++    ++L EA+       N+  L +    E+G L++
Sbjct:    1 MEQLKRRGNALYKKKKIDDALQAYDEALNFPFVAPGKLDHNDE-EARQEEKRIQELRCAIFANRAACYLQKGRLTECIQDATNALRSNGNYVKALYRRAQAYAELGNLRDAFQDLRLALDLDP-----------------------FNQEIIREAHRVRESIQRSEAERQSSGVSVYLASLGTNDEA----FFKKQ-----------NRTDMWEKLISLRALALRLLAACSKHLDFLEDAFSPPSNETICETSFPKLFTSLLPSHEKQKNGVEEEAVLEIAT----NFIRLAETNRRRTQFLTLAIDCWITLLTHRRETFQEIGLASLLSWSANCLNEKDQSLSLLLAKPSWTTLLRFLEDPNDSFDVCLRLEAAEFIGRAFMVLLFH-KGSDEVKSFVSSILDNSVN-ELPAVRKAELELLVTLSLYYADASLGCWLFSTYAAQAKSRTSVLFSEPQYQFFMAKLCNQAANSSAGRICMRDHCMNIVILNIIRSNDAPLEARVAAASAFTKLHIASKDMPLISSELTDILNLLSKGLQDWIGA----SQTLGSTLMHRRTLSESCVEIISFLVTRTAFKNELMFGSSRCIACVPFLL----EVMDQRAERRTIGMSTNINRRNSISALCG---------KTLYGVAFSMASLTLNNEEMKADALQEGGI------AVDEYENIQRILRMQ---------------------------QKQLPQTAIEEDL-DTVDSAQDVEKRIRELVQRNVIGIIRRLVSHTEISESTLDQFATALLNIATIPALRGQFIQDGGYNTCLGLAKEN-RGLEVTRLKSVQALAKCLITTDPKVLASHQRTAPIHALVSLCRNVRATALQQFESSLALTNLASYGKECIDSIALNGGIESFFSLQFSEQTLVRRAATEALCNMVSHPLVLAKLGKPETLKYWLSLAEDYTRDLPLSRAAAGGLAMASKDEEIVRSMAVLSPIALNTWGSLLRSGETTLIHRAATAIQHLYSFNCTRELLFKDENFQNSLREAA-------NIDHLSE----EIGDLIR 939

The following BLAST results are available for this feature:

BLAST of NO04G03420.3 vs.

BLAST of NO04G03420.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28765.1	1.900e-171	38.78	unc-45 family protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G03420	NO04G03420	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G03420.3	NO04G03420.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G03420.3.cds1	NO04G03420.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds2	NO04G03420.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds3	NO04G03420.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds4	NO04G03420.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds5	NO04G03420.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds6	NO04G03420.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds7	NO04G03420.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds8	NO04G03420.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds9	NO04G03420.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds10	NO04G03420.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G03420.3.cds11	NO04G03420.3.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:938027..942406-
coding sequence from alignment at chr4:938027..942406-

mRNA sequence

>NO04G03420.3 ID=NO04G03420.3|Name=NO04G03420.3|organism=Nannochloropsis oceanica|type=mRNA|length=3291bp
ACATCCACAGAGAGGCGCGACACAAGAATAAGGAATACACTGTCAGTCCC
TACCTCAACAAGAGCTGTTCTCCAAACTTACATGCAGAAGCGTATCCATC
CTCCCCAGGATCCCTCCGCCGCCCAGCATATGGAGGTCCTCAAGCAACGC
GGCAATGCTTTGTACGCTCAGAAGAAGTACGACGAGGCCATTAAAGCGTA
CGATGAGGCCATAGCCAGCCTGTCGGTGGCTGCGGGGAGTTCTAGCTCTT
CTGACGAAAAGGAAGTACATGAGAATGTCAAGGAGATCAGCAAGCTGCGC
GGCACTCTCCTCGCGAATCGGGCAGCGTGCTATCTGCAGACAAAACGTTG
GGAGGCATGTATTCTTGACGCCTCGGAGGCTCTCGAGTCGGATCGACAAC
ACGTCAAGGCCTTATACAGACGCGCACAGGCCTACGAAGCGCTTGGCACT
TTTGAGAAGGCGTTCCAAGACTTGCGACTGGCGGTTAATCTAGACCCAAA
CAGCCAAGAGCTCGTGCGAGCCACGCATCGACTACGAGAGGCGACGCAAC
AGCAGGAATCAAGGCGTCAATCCTCTCCCGTGGCGCAGCTATTGGCGCGC
CTACGAAAGGGAAATTTTGAAAGTACAGGTACCATTAGCAGAGCTGATGC
CTGGAAAGGCTTAATTGGCCTGACGAGCGAAGATGGAGCGGCGGCATTGG
ATTTGTTGCGGCAGCAAGGAGGAGGGATTAGATTTGTGGAGGCGTGCATT
CATAATACGGACCTTGAAAGTGAGCGTGTTCTAGCGCTGCGATTGCTGGC
CGCCTCCTGTCAGCATGGTGTCTTTGTCAAGGAAGCATTTACCACGTCCT
GCGATACAGACACGGCGGGAAACTACTTTTTGCAAAGCCTTGTTAACGTG
CTGGGGGAGGGGAGTAAGGTGAGGACGGAGAAGGAGGAGAGAGCGGAGGA
GGAGATCGCCTCTGTACTCGTCTTGAGTTTCATTCGCATGGTCAAGGAAG
GCAAGGGTCATGTGCAGGTTTTGAAGCCCGCAATACAATGCTGGGTCGCG
GCCTTATCACATCGACAGGGCACCATTCAAAAATTAGGTTTGGAGGCCTT
GCTATGGTGGAGTGCGGAGTGCACGACTGCGAAGAACCCAGAATCTGCGA
GTCTGCTTGTTGGGGCATGCCTAGCTCCTTTAGTGAGGCTTTTCGAAGAT
GCGCGAGAATCGTCCACATTTTCGATGCGCCTCAATGCCACGCATCTCTT
GGGACGGATTTTTGGTTGCCTTCTGGGTCAGGAGAAGGGGAAAGAGCGCG
TCAAGACCCTTGCCACGGAGTTGCTCATGACGACCACCACGCTCAAAGTA
CTTGCAGAGAGAAAACTGGAGCTACGCATGTTATTGGTTTTAGCGCTTTT
CAATGCAGACGCAAGTTTGGGGTGTTGGGTGTTGGCAGAAGAGGAGACTG
ATGCTGCTGTACGAAGGCTGCTGGCCTCTGGCGGGGCGGACCAACAAATT
GTGGTGGCAGAGGTGTTCAATAGGGCATCGACGACGGAAACGGGCCGGGC
GTGTCTTCGCCCCTATGTCTTAGATCACACTTTAGTCTGTCTCATGAAGA
CAAGCGGCGCTCCGTTCGAGGCCCGCGTGGCTGCTGCAGCTGCTTTTACG
AAATTAGGTCTCGCTGCCAAGACCCTCCCTTCCACCTCGACCGAGCTAAC
GGACCTTTTAAACATTGCTAGTAGTGGGCTCGAGCAGGCAACTGCATGTC
TCTCCTCTCCCTCGCCTTCATTTGACGGGACGCGCTTGAGGACAAGTGCG
ATAGAGGGAAGTGTCGTCGAAATACTCTCTTGTCTTGCCACACGCACTAC
CCTGAAACGTGAACTCACCTTTGGTTCTAACCGCTGCAAGGCTTGCATTC
GTCTTCTCCTAGCCTTTGTGCAGCAGCATATTGACGAAGGCAGCAGAACC
AGTACTATCACCAGCACCACCAGCATCACCAAGACCACCATTAACAGCAT
CTGCAGTATCAGCAGTAGCAGCGGTGCATATGACAAAGTCTGGTATGGTG
TTGCGTTTGTTTTAGCATCCCTGACGTTGAGTAATGACGAGCTGCGGAAA
GAGGCTTTGCGGGAGAAGGGTATTGCGCCGGAGGAGTTCGAGCAGCTGCG
GAAAATCCAGGAGATGCAACAACTGGTACGACAAGACTGGAATGTAGACA
ATCATGAGTTGTCTTCTTGTGCATTTTTTAAAGGAAATTTTAACGAACTC
TTCATACACACGCATGGACGTGCGCACGTACAGCAGGAAGGAAGTGAAGT
GGACATCATTGAAGCCGCTGACCCGCCCGAGGACGTTGAATCTCGCGTGA
AGGAGCTGGTCCGCCTCAACGCCATCCGTGCCCTCAGTCGGCTTCTCTCC
TTCCAGGGGTTAAGTCCCTTAGCACAAGAACAAGCAGTGACGGCATTGGT
GCAAATCGCAACGGTGCCTGAAGTGAGGGGACGTCTAATTCTGGAAGGAG
GATACAATGCTTGCTTAAGCATTGCTAAAAAGGGCGCAAAGTCGATGGAA
ACCACACGGATAAAGTCGCTGCATGCCCTGGCTAAGTGTCTAGTCACAAC
CAACCCCAAAATGCTCTCCGACAGGCAACGCCTGGCCCCCATAGCTGGCT
TGCTCTGGCTATGCCGCCATCCCATGGTAACTTATCTCCAGCAATTCGAG
TCCCTCTTAGCTCTTACGAATCTTGCTTCCCATGAGGAAGACTGTGTGGA
AGCCATCCTCAGTAATCAGGGACTTAAATGCTTGCTCTCAATGCAATTCT
CGGAGCATCTGCTGGTCAGACGAGCAGCCACCGAGGCCCTCTGCAACATG
GTTTATCACCCACATGTGCTTGCAAGTCTTCGAAATCCTGATACACTCAA
GCTTTGGCTGGCTCTGGCAGAAGATTACGAAGGGGACCTTCTCACCGCAC
GTGCTGCCGCCGGGGGGTTGGCAATAGCGTCAGGGGACGAAGAAATGGCC
AGTGGCATTGTGGAAGTTCCAATAATGGGGTTGAGCGTATGGAGGACTTT
ACTGTCGAGTGGGGATAGCGACCTCATTCATCGCGCTGCTGTTGCTATAC
GGAGTTTTACTCGCTTCAAGAAGACGCAGCAAGCCTTGGTCCGTGAGGGA
TGGTTGCTGAGCGCTTTGGAGGAGGCGTCAGCGGGGGCCGGGAAACCAGA
AAATTTACAACAATTAATGCAGGCCATCATCGCTGAGGTCGGCCAACTTT
TAAAGTAAAGTAAAGCAAGGGGAATACTGCGAGTAATTTTT

protein sequence of NO04G03420.3

>NO04G03420.3-protein ID=NO04G03420.3-protein|Name=NO04G03420.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1059bp
MQKRIHPPQDPSAAQHMEVLKQRGNALYAQKKYDEAIKAYDEAIASLSVA
AGSSSSSDEKEVHENVKEISKLRGTLLANRAACYLQTKRWEACILDASEA
LESDRQHVKALYRRAQAYEALGTFEKAFQDLRLAVNLDPNSQELVRATHR
LREATQQQESRRQSSPVAQLLARLRKGNFESTGTISRADAWKGLIGLTSE
DGAAALDLLRQQGGGIRFVEACIHNTDLESERVLALRLLAASCQHGVFVK
EAFTTSCDTDTAGNYFLQSLVNVLGEGSKVRTEKEERAEEEIASVLVLSF
IRMVKEGKGHVQVLKPAIQCWVAALSHRQGTIQKLGLEALLWWSAECTTA
KNPESASLLVGACLAPLVRLFEDARESSTFSMRLNATHLLGRIFGCLLGQ
EKGKERVKTLATELLMTTTTLKVLAERKLELRMLLVLALFNADASLGCWV
LAEEETDAAVRRLLASGGADQQIVVAEVFNRASTTETGRACLRPYVLDHT
LVCLMKTSGAPFEARVAAAAAFTKLGLAAKTLPSTSTELTDLLNIASSGL
EQATACLSSPSPSFDGTRLRTSAIEGSVVEILSCLATRTTLKRELTFGSN
RCKACIRLLLAFVQQHIDEGSRTSTITSTTSITKTTINSICSISSSSGAY
DKVWYGVAFVLASLTLSNDELRKEALREKGIAPEEFEQLRKIQEMQQLVR
QDWNVDNHELSSCAFFKGNFNELFIHTHGRAHVQQEGSEVDIIEAADPPE
DVESRVKELVRLNAIRALSRLLSFQGLSPLAQEQAVTALVQIATVPEVRG
RLILEGGYNACLSIAKKGAKSMETTRIKSLHALAKCLVTTNPKMLSDRQR
LAPIAGLLWLCRHPMVTYLQQFESLLALTNLASHEEDCVEAILSNQGLKC
LLSMQFSEHLLVRRAATEALCNMVYHPHVLASLRNPDTLKLWLALAEDYE
GDLLTARAAAGGLAIASGDEEMASGIVEVPIMGLSVWRTLLSSGDSDLIH
RAAVAIRSFTRFKKTQQALVREGWLLSALEEASAGAGKPENLQQLMQAII
AEVGQLLK*

mRNA from alignment at chr4:938027..942406-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G03420.3 ID=NO04G03420.3|Name=NO04G03420.3|organism=Nannochloropsis oceanica|type=mRNA|length=4380bp|location=Sequence derived from alignment at chr4:938027..942406- (Nannochloropsis oceanica)
ACATCCACAGAGAGGCGCGACACAAGAATAAGGAATACACTGTCAGTCCC
TACCTCAACAAGAGCTGTTCTCCAAACTTACATGCAGAAGCGTATCCATC
CTCCCCAGGATCCCTCCGCCGCCCAGCATATGGAGGTCCTCAAGCAACGC
GGCAATGCTTTGTACGCTCAGAAGAAGTACGACGAGGCCATTAAAGCGTA
CGATGAGGCCATAGCCAGCCTGTCGGTGGCTGCGGGGAGTTCTAGCTCTT
CTGACGAAAAGGTGACAAGGGGGGTGGCATGAAAGAGCTGGGAGGTTTTT
GAATGCGCAGTAACGCGGGCAGTGTTCCCTCGCGACGGCTGCCAAACAAG
TGATCTGGAAGTTGGGTAGAAGTGGTTTGGTTTGCTAAGCTATGTCTTGG
CAATAAGAGGGAATGTAACGCCTTGCATTCCCTCTATACTCAATCTTATA
CGCCAGGAAGTACATGAGAATGTCAAGGAGATCAGCAAGCTGCGCGGCAC
TCTCCTCGCGAATCGGGCAGCGTGCTATCTGCAGACAAAACGTTGGGAGG
CATGTATTCTTGTAAGTTGGAGGAAGGCCATGCATTTACTCGACCAAATA
CGTATATAATGTTTACCCTCCGCTATCACATGCACAGGACGCCTCGGAGG
CTCTCGAGTCGGATCGACAACACGTCAAGGCCTTATACAGACGCGCACAG
GTAGCTCTTCTGCAAAAATCCGTTTTTCACGCTAATCTAATGTTTTCAAC
AAGGTGCTGATTTATTGTTTTATTTTTGTTGCACTCGCGCGTCGTCTTCA
CTTACAAGGCCTACGAAGCGCTTGGCACTTTTGAGAAGGCGTTCCAAGAC
TTGCGACTGGCGGTATGTCTATATAAAATGGGAAGGTGGCAAGATGGGTG
ACTTTATCATTTCATTCCTTTTCCTTGTATTTCTGATGTGCAAATCTCTC
TGGGATGTATGGTGTATTTATTAATATATACAGGTTAATCTAGACCCAAA
CAGCCAAGAGCTCGTGCGAGCCACGCATCGACTACGAGAGGCGACGCAAC
AGCAGGAATCAAGGCGTCAATCCTCTCCCGTGGCGCAGCTATTGGCGCGC
CTACGAAAGGGAAATTTTGAAAGTACAGGTACCATTAGCAGAGCTGATGC
CTGGAAAGGCTTAATTGGCCTGACGAGCGAAGATGGAGCGGCGGCATTGG
ATTTGTTGCGGCAGCAAGGAGGAGGGATTAGATTTGTGGAGGCGTGCATT
CATAATACGGACCTTGAAAGTGAGGTGCGTTGATTGGCTTCTTTACATTC
GTTTTATGGACCAGCAGCCCTCCCGATCATTTTCTCAACACCCACATCTT
GCTTCTCTTTATCGCAGCGTGTTCTAGCGCTGCGATTGCTGGCCGCCTCC
TGTCAGCATGGTGTCTTTGTCAAGGAAGCATTTACCACGTCCTGCGATAC
AGACACGGCGGGAAACTACTTTTTGCAAAGCCTTGTTAACGTGCTGGGGG
AGGGGAGTAAGGTGAGGACGGAGAAGGAGGAGAGAGCGGAGGAGGAGATC
GCCTCTGTACTCGTCTTGAGTTTCATTCGCATGGTCAAGGAAGGCAAGGG
TCATGTGCAGGTTTTGAAGCCCGCAATACAATGCTGGGTCGCGGCCTTAT
CACATCGACAGGTGAGAAAGTGTTGATGTTCCTCCACTTCTTTGCAGCAC
TTCTTTGAAGCAGAACGAGTTGAACAGTCCGCTACTTAGATCTAATTGGC
CATTTCTTTTCTTCCCGCATTTACCAGGGCACCATTCAAAAATTAGGTTT
GGAGGCCTTGCTATGGTGGAGTGCGGAGTGCACGACTGCGAAGAACCCAG
AATCTGCGAGTCTGCTTGTTGGGGCATGCCTAGCTCCTTTAGTGAGGTAC
GTGCGTACGTGGCTGTGTGCACGAAGAGGAGATGGGGGGGGGGATGGGCG
GGGTGAGAGCAGGTGGTCTGACTACTTTAATCTTCGGGTGATAGACATAA
TTTTATCTCAATATAATCATGAGCAGGCTTTTCGAAGATGCGCGAGAATC
GTCCACATTTTCGATGCGCCTCAATGCCACGCATCTCTTGGGACGGATTT
TTGGTTGCCTTCTGGGTCAGGAGAAGGGGAAAGAGCGCGTCAAGACCCTT
GCCACGGAGTTGCTCATGACGACCACCACGCTCAAAGTACTTGCAGAGAG
AAAACTGGAGCTACGCATGTTATTGGTTTTAGCGCTTTTCAATGCAGACG
CAAGTTTGGGGTGTTGGGTGTTGGCAGAAGAGGAGACTGATGCTGCTGTA
CGAAGGCTGCTGGCCTCTGGCGGGGCGGACCAACAAATTGTGGTGGCAGA
GGTGTTCAATAGGGCATCGACGACGGAAACGGGCCGGGCGTGTCTTCGCC
CCTATGTCTTAGATCACACTTTAGTCTGTCTCATGAAGACAAGCGGCGCT
CCGTTCGAGGCCCGCGTGGCTGCTGCAGCTGCTTTTACGAAATTAGGTCT
CGCTGCCAAGACCCTCCCTTCCACCTCGACCGAGCTAACGGACCTTTTAA
ACATTGCTAGTAGTGGGCTCGAGCAGGCAACTGCATGTCTCTCCTCTCCC
TCGCCTTCATTTGACGGGACGCGCTTGAGGACAAGTGCGATAGAGGGAAG
TGTCGTCGAAATACTCTCTTGTCTTGCCACACGCACTACCCTGAAACGTG
AACTCACCTTTGGTTCTAACCGCTGCAAGGCTTGCATTCGTCTTCTCCTA
GCCTTTGTGCAGCAGCATATTGACGAAGGCAGCAGAACCAGTACTATCAC
CAGCACCACCAGCATCACCAAGACCACCATTAACAGCATCTGCAGTATCA
GCAGTAGCAGCGGTGCATATGACAAAGTCTGGTATGGTGTTGCGTTTGTT
TTAGCATCCCTGACGTTGAGTAATGACGAGCTGCGGAAAGAGGCTTTGCG
GGAGAAGGGTATTGCGCCGGAGGAGTTCGAGCAGCTGCGGAAAATCCAGG
AGATGCAACAACTGGTACGACAAGACTGGAATGTAGACAATCATGAGTTG
TCTTCTTGTGCATTTTTTAAAGGAAATTTTAACGAACTCTTCATACACAC
GCATGGACGTGCGCACGTACAGCAGGAAGGAAGTGAAGTGGACATCATTG
AAGCCGCTGACCCGCCCGAGGACGTTGAATCTCGCGTGAAGGAGCTGGTC
CGCCTCAACGCCATCCGTGCCCTCAGTCGGCTTCTCTCCTTCCAGGGGTT
AAGTCCCTTAGCACAAGAACAAGCAGTGACGGCATTGGTGCAAATCGCAA
CGGTGCCTGAAGTGAGGGGACGTCTAATTCTGGAAGGAGGATACAATGCT
TGCTTAAGCATTGCTAAAAAGGGCGCAAAGTCGATGGAAACCACACGGAT
AAAGTCGCTGCATGCCCTGGCTAAGGTAAATTACCTGAAAGTGGTCTCTT
TTAGGGTCTCTTTTCATTCAAATCTTCCAACCTAAACCTTGTTAATCTTC
CTTTTTCCCTGCCCCCATATTCCTCAGTGTCTAGTCACAACCAACCCCAA
AATGCTCTCCGACAGGCAACGCCTGGCCCCCATAGCTGGCTTGCTCTGGC
TATGCCGCCATCCCATGGTAACTTATCTCCAGCAATTCGAGTCCCTCTTA
GCTCTTACGAATCTTGCTTCCCATGAGGAAGACTGTGTGGAAGCCATCCT
CAGTAATCAGGGACTTAAATGCTTGCTCTCAATGCAATTCTCGGAGCATC
TGCTGGTCAGACGAGCAGCCACCGAGGCCCTCTGCAACATGGTTTATCAC
CCACATGTGCTTGCAAGTCTTCGAAATCCTGATACACTCAAGCTTTGGCT
GGCTCTGGCAGAAGATTACGAAGGGGACCTTCTCACCGCACGTGCTGCCG
CCGGGGGGTTGGCAATAGCGTCAGGGGACGAAGGTAAGGAAAGAATGATG
GTTTCCTCAATGGTCAGAGCAGGCTTCAAATTCGCTCACATAATCTAATA
CACAGAAATGGCCAGTGGCATTGTGGAAGTTCCAATAATGGGGTTGAGCG
TATGGAGGACTTTACTGTCGAGTGGGGATAGCGACCTCATTCATCGCGCT
GCTGTTGCTATACGTAAGTTTTTTCTCTTTCTCATCTCACCGGAGACTGC
GCCTCTTGACTCATGCTTCGTCTTTTTCATCATTCATAGGGAGTTTTACT
CGCTTCAAGAAGACGCAGCAAGCCTTGGTCCGTGAGGGATGGTTGCTGAG
CGCTTTGGAGGAGGCGTCAGCGGGGGCCGGGAAACCAGAAAATTTACAAC
AATTAATGCAGGCCATCATCGCTGAGGTCGGCCAACTTTTAAAGTAAAGT
AAAGCAAGGGGAATACTGCGAGTAATTTTT

Coding sequence (CDS) from alignment at chr4:938027..942406-

>NO04G03420.3 ID=NO04G03420.3|Name=NO04G03420.3|organism=Nannochloropsis oceanica|type=CDS|length=3177bp|location=Sequence derived from alignment at chr4:938027..942406- (Nannochloropsis oceanica)
ATGCAGAAGCGTATCCATCCTCCCCAGGATCCCTCCGCCGCCCAGCATAT
GGAGGTCCTCAAGCAACGCGGCAATGCTTTGTACGCTCAGAAGAAGTACG
ACGAGGCCATTAAAGCGTACGATGAGGCCATAGCCAGCCTGTCGGTGGCT
GCGGGGAGTTCTAGCTCTTCTGACGAAAAGGAAGTACATGAGAATGTCAA
GGAGATCAGCAAGCTGCGCGGCACTCTCCTCGCGAATCGGGCAGCGTGCT
ATCTGCAGACAAAACGTTGGGAGGCATGTATTCTTGACGCCTCGGAGGCT
CTCGAGTCGGATCGACAACACGTCAAGGCCTTATACAGACGCGCACAGGC
CTACGAAGCGCTTGGCACTTTTGAGAAGGCGTTCCAAGACTTGCGACTGG
CGGTTAATCTAGACCCAAACAGCCAAGAGCTCGTGCGAGCCACGCATCGA
CTACGAGAGGCGACGCAACAGCAGGAATCAAGGCGTCAATCCTCTCCCGT
GGCGCAGCTATTGGCGCGCCTACGAAAGGGAAATTTTGAAAGTACAGGTA
CCATTAGCAGAGCTGATGCCTGGAAAGGCTTAATTGGCCTGACGAGCGAA
GATGGAGCGGCGGCATTGGATTTGTTGCGGCAGCAAGGAGGAGGGATTAG
ATTTGTGGAGGCGTGCATTCATAATACGGACCTTGAAAGTGAGCGTGTTC
TAGCGCTGCGATTGCTGGCCGCCTCCTGTCAGCATGGTGTCTTTGTCAAG
GAAGCATTTACCACGTCCTGCGATACAGACACGGCGGGAAACTACTTTTT
GCAAAGCCTTGTTAACGTGCTGGGGGAGGGGAGTAAGGTGAGGACGGAGA
AGGAGGAGAGAGCGGAGGAGGAGATCGCCTCTGTACTCGTCTTGAGTTTC
ATTCGCATGGTCAAGGAAGGCAAGGGTCATGTGCAGGTTTTGAAGCCCGC
AATACAATGCTGGGTCGCGGCCTTATCACATCGACAGGGCACCATTCAAA
AATTAGGTTTGGAGGCCTTGCTATGGTGGAGTGCGGAGTGCACGACTGCG
AAGAACCCAGAATCTGCGAGTCTGCTTGTTGGGGCATGCCTAGCTCCTTT
AGTGAGGCTTTTCGAAGATGCGCGAGAATCGTCCACATTTTCGATGCGCC
TCAATGCCACGCATCTCTTGGGACGGATTTTTGGTTGCCTTCTGGGTCAG
GAGAAGGGGAAAGAGCGCGTCAAGACCCTTGCCACGGAGTTGCTCATGAC
GACCACCACGCTCAAAGTACTTGCAGAGAGAAAACTGGAGCTACGCATGT
TATTGGTTTTAGCGCTTTTCAATGCAGACGCAAGTTTGGGGTGTTGGGTG
TTGGCAGAAGAGGAGACTGATGCTGCTGTACGAAGGCTGCTGGCCTCTGG
CGGGGCGGACCAACAAATTGTGGTGGCAGAGGTGTTCAATAGGGCATCGA
CGACGGAAACGGGCCGGGCGTGTCTTCGCCCCTATGTCTTAGATCACACT
TTAGTCTGTCTCATGAAGACAAGCGGCGCTCCGTTCGAGGCCCGCGTGGC
TGCTGCAGCTGCTTTTACGAAATTAGGTCTCGCTGCCAAGACCCTCCCTT
CCACCTCGACCGAGCTAACGGACCTTTTAAACATTGCTAGTAGTGGGCTC
GAGCAGGCAACTGCATGTCTCTCCTCTCCCTCGCCTTCATTTGACGGGAC
GCGCTTGAGGACAAGTGCGATAGAGGGAAGTGTCGTCGAAATACTCTCTT
GTCTTGCCACACGCACTACCCTGAAACGTGAACTCACCTTTGGTTCTAAC
CGCTGCAAGGCTTGCATTCGTCTTCTCCTAGCCTTTGTGCAGCAGCATAT
TGACGAAGGCAGCAGAACCAGTACTATCACCAGCACCACCAGCATCACCA
AGACCACCATTAACAGCATCTGCAGTATCAGCAGTAGCAGCGGTGCATAT
GACAAAGTCTGGTATGGTGTTGCGTTTGTTTTAGCATCCCTGACGTTGAG
TAATGACGAGCTGCGGAAAGAGGCTTTGCGGGAGAAGGGTATTGCGCCGG
AGGAGTTCGAGCAGCTGCGGAAAATCCAGGAGATGCAACAACTGGTACGA
CAAGACTGGAATGTAGACAATCATGAGTTGTCTTCTTGTGCATTTTTTAA
AGGAAATTTTAACGAACTCTTCATACACACGCATGGACGTGCGCACGTAC
AGCAGGAAGGAAGTGAAGTGGACATCATTGAAGCCGCTGACCCGCCCGAG
GACGTTGAATCTCGCGTGAAGGAGCTGGTCCGCCTCAACGCCATCCGTGC
CCTCAGTCGGCTTCTCTCCTTCCAGGGGTTAAGTCCCTTAGCACAAGAAC
AAGCAGTGACGGCATTGGTGCAAATCGCAACGGTGCCTGAAGTGAGGGGA
CGTCTAATTCTGGAAGGAGGATACAATGCTTGCTTAAGCATTGCTAAAAA
GGGCGCAAAGTCGATGGAAACCACACGGATAAAGTCGCTGCATGCCCTGG
CTAAGTGTCTAGTCACAACCAACCCCAAAATGCTCTCCGACAGGCAACGC
CTGGCCCCCATAGCTGGCTTGCTCTGGCTATGCCGCCATCCCATGGTAAC
TTATCTCCAGCAATTCGAGTCCCTCTTAGCTCTTACGAATCTTGCTTCCC
ATGAGGAAGACTGTGTGGAAGCCATCCTCAGTAATCAGGGACTTAAATGC
TTGCTCTCAATGCAATTCTCGGAGCATCTGCTGGTCAGACGAGCAGCCAC
CGAGGCCCTCTGCAACATGGTTTATCACCCACATGTGCTTGCAAGTCTTC
GAAATCCTGATACACTCAAGCTTTGGCTGGCTCTGGCAGAAGATTACGAA
GGGGACCTTCTCACCGCACGTGCTGCCGCCGGGGGGTTGGCAATAGCGTC
AGGGGACGAAGAAATGGCCAGTGGCATTGTGGAAGTTCCAATAATGGGGT
TGAGCGTATGGAGGACTTTACTGTCGAGTGGGGATAGCGACCTCATTCAT
CGCGCTGCTGTTGCTATACGGAGTTTTACTCGCTTCAAGAAGACGCAGCA
AGCCTTGGTCCGTGAGGGATGGTTGCTGAGCGCTTTGGAGGAGGCGTCAG
CGGGGGCCGGGAAACCAGAAAATTTACAACAATTAATGCAGGCCATCATC
GCTGAGGTCGGCCAACTTTTAAAGTAA

Synonyms

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