NO04G03270.1, NO04G03270.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO04G03270.1
Unique NameNO04G03270.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length543
Alignment locationchr4:907405..907947 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:907405..907947 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G03270.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03270NO04G03270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO04G03270.1NO04G03270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO04G03270.1.cds1NO04G03270.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO04G03270.1 ID=NO04G03270.1|Name=NO04G03270.1|organism=Nannochloropsis oceanica|type=mRNA|length=543bp
ATGTTGGTGTCGGTGTTGGTGCTGCTGCCACCGCTGGTGGTGGAGTTGGC
GAAACAGGAGAGGAGCCACAAGAGCAGCAGCCACCCGTCCTTGACGCTAG
TGCCGGTCAAAGTGGGAGCGGAAGTTCCCTGGAGGTTGTACGGGGGCTTG
TGTCGGAGAGTTATCGCCACTGCAGAGACTAAGGTGGACATGCATTTGGT
CGCCGTGTCTGTTGCGGATGAGGAAGGTTTCTACATCCTTCACACCAAAG
AGAGCATCACGGACAAGCCGTTGCCTTTCAAGGATGATGAGGTTGTAATT
GTCATGAAGCCTCAAGTGATGGTGGATGAGGGGACAGGCAAAACCTTCTT
TCACCTGAAGAAGAAAGACTTGGAGAGGCAACTGAAAGTTTTTGAAGAGC
TTTTTGAGGACTTGGGTTACAACAATGTCCTGCCGCAGAGGCTTCCGCAC
AGGCCGAGCACGGTGTTACCGGAGCCTGTCACGAAGGAGATGCCATTGGC
AAAGAAAGAAATCAATGAGAAAGTGTGTTGTTTGTGCAATTAA
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protein sequence of NO04G03270.1

>NO04G03270.1-protein ID=NO04G03270.1-protein|Name=NO04G03270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bp
MLVSVLVLLPPLVVELAKQERSHKSSSHPSLTLVPVKVGAEVPWRLYGGL
CRRVIATAETKVDMHLVAVSVADEEGFYILHTKESITDKPLPFKDDEVVI
VMKPQVMVDEGTGKTFFHLKKKDLERQLKVFEELFEDLGYNNVLPQRLPH
RPSTVLPEPVTKEMPLAKKEINEKVCCLCN*
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mRNA from alignment at chr4:907405..907947-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO04G03270.1 ID=NO04G03270.1|Name=NO04G03270.1|organism=Nannochloropsis oceanica|type=mRNA|length=543bp|location=Sequence derived from alignment at chr4:907405..907947- (Nannochloropsis oceanica)
ATGTTGGTGTCGGTGTTGGTGCTGCTGCCACCGCTGGTGGTGGAGTTGGC
GAAACAGGAGAGGAGCCACAAGAGCAGCAGCCACCCGTCCTTGACGCTAG
TGCCGGTCAAAGTGGGAGCGGAAGTTCCCTGGAGGTTGTACGGGGGCTTG
TGTCGGAGAGTTATCGCCACTGCAGAGACTAAGGTGGACATGCATTTGGT
CGCCGTGTCTGTTGCGGATGAGGAAGGTTTCTACATCCTTCACACCAAAG
AGAGCATCACGGACAAGCCGTTGCCTTTCAAGGATGATGAGGTTGTAATT
GTCATGAAGCCTCAAGTGATGGTGGATGAGGGGACAGGCAAAACCTTCTT
TCACCTGAAGAAGAAAGACTTGGAGAGGCAACTGAAAGTTTTTGAAGAGC
TTTTTGAGGACTTGGGTTACAACAATGTCCTGCCGCAGAGGCTTCCGCAC
AGGCCGAGCACGGTGTTACCGGAGCCTGTCACGAAGGAGATGCCATTGGC
AAAGAAAGAAATCAATGAGAAAGTGTGTTGTTTGTGCAATTAA
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Coding sequence (CDS) from alignment at chr4:907405..907947-

>NO04G03270.1 ID=NO04G03270.1|Name=NO04G03270.1|organism=Nannochloropsis oceanica|type=CDS|length=543bp|location=Sequence derived from alignment at chr4:907405..907947- (Nannochloropsis oceanica)
ATGTTGGTGTCGGTGTTGGTGCTGCTGCCACCGCTGGTGGTGGAGTTGGC
GAAACAGGAGAGGAGCCACAAGAGCAGCAGCCACCCGTCCTTGACGCTAG
TGCCGGTCAAAGTGGGAGCGGAAGTTCCCTGGAGGTTGTACGGGGGCTTG
TGTCGGAGAGTTATCGCCACTGCAGAGACTAAGGTGGACATGCATTTGGT
CGCCGTGTCTGTTGCGGATGAGGAAGGTTTCTACATCCTTCACACCAAAG
AGAGCATCACGGACAAGCCGTTGCCTTTCAAGGATGATGAGGTTGTAATT
GTCATGAAGCCTCAAGTGATGGTGGATGAGGGGACAGGCAAAACCTTCTT
TCACCTGAAGAAGAAAGACTTGGAGAGGCAACTGAAAGTTTTTGAAGAGC
TTTTTGAGGACTTGGGTTACAACAATGTCCTGCCGCAGAGGCTTCCGCAC
AGGCCGAGCACGGTGTTACCGGAGCCTGTCACGAAGGAGATGCCATTGGC
AAAGAAAGAAATCAATGAGAAAGTGTGTTGTTTGTGCAATTAA
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Synonyms
Publications