NO04G02740.1, NO04G02740.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G02740.1
Unique Name	NO04G02740.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3526
Alignment location	chr4:724996..728521 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:724996..728521 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G02740.1 vs.
Match: EWM28763.1 (Pentatricopeptide repeat containing protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 519.6 bits (1337), Expect = 2.300e-143
Identity = 415/792 (52.40%), Postives = 469/792 (59.22%), Query Frame = 0

Query:   10 MNEPPTLDCSRGDNTSGYSTESS--NSSSGLWSFGGSGRGGNGSTSSNRRGTVSSASSASSGKAPDTPSSHDCVPFTAIGSSLDAPRWPGD------GIAGASTGTNHNPGGVGLSRCMLSSPNPPSSPSPAGLHIRTWDPPPH--SPTTYGSQSEGAAAAAAAAAGAAIQRNGLPSGKEHHLYSGSSSAASSPVSTTLSHCKKSIPKQHEWSHGGLGNMDPHMSPLSNSGSPSLISPSPTVSNYSFGFQSPMPSDLESSFANLLLDRTGGSAVEGGACTPRGRAQALQQFQQQQQQQQQHHHHHYHHHQQQQQQHIQQQQPPQLRHVHGIAVGLGLDDRPPLHNQLQGSPTSAGLRILTGRQFPSQQHQQQQQEQQQQQEQQEQQEQPLPPQQQPQPPQQQQHLHHHHHQQQSLIIQIPASTSAFGSGPSSAPAAGMSNRSHLFLSGSDEVGLHARGTYSPRLQGQTSPRFLGSTTGGIGGGMNTRGMGGGGGGGNGFHNRSPRQHHPQQQQGGNSLYMHNVGGGRSSSLSSRGSGGGGMMNGGYGGGSPHHLMAGGSGRRGGGGGGGGGGSRGGGGGFYSPTGSSSSGMGSPIGGGRLEVYYGGGSPRGMGYSGHGGEGPMDFETKRCSNAIKKLCSAGNVTEVFAVLEDMLGHGLVPDLKTVKTIMRTCVKKLAWRRAVQLLHTTGLPLDVVIFTMAINTCGKAGEWEQGLRVLREMDSEEAKAHGIVPNEVSYGTAISACGKAGRWELALSLLNEVKDRGLLLNDVCYGGAIDACGRAGQWQEALKLL 792
            MNEPP L   R + T  +++ SS  NSSSGLWS+GGS  GG+G+T     G  SSA +    +AP          F  I  S   P W  +      G + +S G  H     G S  +L+  +PP SP P  L +R  D      S   +  ++EGAAAAAAAAAGA + R  +P G E  L SGS S  SSP      H +K      +W  G L       SP    GSP   S SPT S+   G +SP+  +LE S + L+LDR G  A    A    GR+    ++QQQ Q  QQ HHH     Q       QQ    QLR  HG+  G   D+R   ++QL       G+R    R + S Q Q+                   PP  QP                Q+L+IQIP  +SA GSGPSSAPAAGMSNRS+LF  G  E G + RG++SP L  Q SPR  GS  G +G       MG G    N FHN+SPRQ+H Q  Q   S YMH   G RS SL   G  G         GGSP HLMA  + RRGGGG  G GG   GGGG YSPTGSS   MGSP G G  E Y GGGSPR MG+ GHGG G MD E KRCSNAIKKLCSAGNVTEVFAVLEDMLG GLVPDLKTVKTIMRTCVKKLAWRRAVQLLH  GLPLDVVIFTMAINTCGKAGEWEQGLRVLREMDS++AKA GI+PNEVSYGTAISACGKAGRWELALSLLNEVK RGLLLNDVCYGGAIDACGRAGQWQEALKLL
Sbjct:    1 MNEPPALANLRDNITPLFTSSSSSNNSSSGLWSYGGSV-GGDGTTQDGGGGC-SSADAQPQEQAP----------FHNISPSFSTPPWSNEWGDSREGKSSSSAGMGH-----GNSASVLNHLHPPVSPPPCALKLRPRDSASSNCSMNEFYCRTEGAAAAAAAAAGAVVNRFVVP-GTEACLTSGSPSDLSSP-GPDPRHSRKQ-----DWGPGALEMGSRMSSP--GGGSPLFRSSSPTASH---GGRSPVV-ELECSLSGLVLDRGGERAGSESAWALPGRSPDNVKYQQQHQHDQQQHHHERRGDQPYPAPQQQQPMSRQLRGAHGLG-GSAFDERSAFNSQLH----VGGVRGQGNRPYASNQPQK-------------------PPAPQPH---------------QALMIQIPTLSSALGSGPSSAPAAGMSNRSYLFAEGGSEGGRN-RGSFSPTLHNQASPRPPGS--GNLGN------MGMGMAARNSFHNQSPRQYHYQANQ---SPYMHGAAG-RSGSLGRSGVSGAAY------GGSPPHLMA--TARRGGGGNRGMGGG-AGGGGMYSPTGSSP--MGSPTGSGGDEYYGGGGSPRWMGHGGHGGGGAMDVEAKRCSNAIKKLCSAGNVTEVFAVLEDMLGRGLVPDLKTVKTIMRTCVKKLAWRRAVQLLHMEGLPLDVVIFTMAINTCGKAGEWEQGLRVLREMDSDDAKARGILPNEVSYGTAISACGKAGRWELALSLLNEVKGRGLLLNDVCYGGAIDACGRAGQWQEALKLL 699

The following BLAST results are available for this feature:

BLAST of NO04G02740.1 vs.

BLAST of NO04G02740.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28763.1	2.300e-143	52.40	Pentatricopeptide repeat containing protein, parti...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G02740	NO04G02740	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G02740.1	NO04G02740.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G02740.1.cds1	NO04G02740.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:724996..728521-
coding sequence from alignment at chr4:724996..728521-

mRNA sequence

>NO04G02740.1 ID=NO04G02740.1|Name=NO04G02740.1|organism=Nannochloropsis oceanica|type=mRNA|length=3526bp
AAAGGACAGGCTAAACGAGGTGTTTTGCGACTTGAGACTCGCCCAACGGC
GATATATCCTAGCCTCCCAATTGCCCCACGTTGACCTCAGGGGACAAGAG
CAAAGGGACGAAATGCCCTACAGCTACCCAGGACGCCTTCATTTCCCGAT
ATCAGACCTCTGACATCACCTTCTTTCTCCTCGATAACATGCGTGTCCCC
AGCTTTAGACAGGAATGTCATATCCTCGTAGGACATAAGGGCGAAAGGTT
CAAGACCCAGCCAGGTGTCTGCTTGAGCGCAGCAACGCTTCTGGACGAAG
GATGAAGAAAAAATCCCACGGCACAGATATGAACGAACCGCCTACCTTGG
ATTGCTCTCGCGGCGATAACACATCCGGCTACAGTACGGAGAGCAGCAAC
AGCAGCAGCGGCCTGTGGTCTTTCGGCGGCAGCGGCAGGGGGGGCAATGG
AAGCACAAGCAGCAACAGGAGAGGGACCGTAAGCAGTGCAAGCAGCGCAA
GCAGTGGCAAGGCCCCCGACACTCCGTCGTCCCACGACTGTGTTCCTTTC
ACTGCAATTGGCTCCTCGCTCGATGCTCCCCGTTGGCCTGGTGATGGGAT
CGCAGGGGCCTCTACCGGCACCAACCACAATCCTGGCGGCGTGGGCTTGA
GTCGGTGTATGTTGTCGTCCCCGAACCCCCCGTCCTCCCCATCGCCCGCA
GGCCTCCACATCCGCACCTGGGATCCACCACCTCATTCCCCGACGACGTA
CGGCAGCCAATCAGAAGGTGCAGCAGCAGCAGCAGCGGCAGCTGCGGGGG
CGGCCATTCAACGTAATGGACTACCTAGCGGGAAGGAGCATCACCTTTAT
TCGGGTTCGTCGTCCGCGGCCTCGTCGCCTGTTTCTACGACGTTGAGCCA
TTGTAAGAAAAGTATACCAAAGCAGCACGAATGGAGCCACGGGGGATTAG
GGAATATGGATCCTCATATGTCTCCCTTGTCAAATAGTGGCTCGCCGTCC
TTGATCTCGCCGAGTCCCACCGTCAGCAACTACAGCTTTGGATTTCAGTC
ACCCATGCCATCTGATCTCGAATCGTCATTTGCAAACCTGCTGCTAGATC
GAACGGGGGGTAGTGCGGTGGAGGGAGGGGCATGCACGCCCCGAGGACGG
GCACAGGCCTTGCAGCAGTTTCAACAGCAGCAGCAGCAGCAGCAGCAGCA
TCATCATCATCATTACCATCATCATCAACAACAGCAGCAGCAGCACATTC
AGCAGCAGCAGCCACCGCAGCTTCGCCACGTGCATGGTATTGCAGTAGGA
CTGGGACTTGATGACCGTCCTCCCCTTCACAATCAACTTCAAGGTTCTCC
TACTTCCGCTGGACTACGCATTCTCACCGGTCGTCAGTTTCCCTCCCAGC
AGCATCAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGGAGCAGCAGGAG
CAGCAGGAGCAGCCGCTGCCGCCGCAGCAGCAGCCACAGCCGCCACAGCA
GCAGCAGCACCTCCACCACCACCACCACCAGCAGCAGTCGCTCATAATCC
AGATCCCAGCGTCGACCTCTGCCTTTGGCTCGGGTCCGAGCAGTGCTCCC
GCCGCAGGGATGAGCAATCGAAGCCATCTCTTCTTGAGTGGTAGTGATGA
GGTCGGGCTCCACGCTCGGGGCACGTACTCTCCACGCCTGCAAGGGCAGA
CTTCACCTCGTTTCCTGGGCAGCACTACGGGAGGGATTGGGGGAGGGATG
AACACGAGGGGCATGGGTGGAGGGGGAGGGGGTGGGAACGGTTTTCACAA
CCGATCTCCTCGGCAGCATCATCCCCAGCAACAGCAGGGGGGCAATTCTC
TGTATATGCATAATGTAGGGGGAGGGCGGAGCAGCAGCTTAAGTAGTCGT
GGTAGTGGTGGTGGAGGAATGATGAATGGTGGGTATGGTGGAGGGTCTCC
GCACCACTTAATGGCTGGCGGAAGTGGTCGACGTGGAGGAGGAGGAGGAG
GAGGAGGAGGCGGAAGCCGTGGTGGTGGCGGAGGGTTTTATTCGCCGACG
GGATCGAGTAGTAGTGGGATGGGGAGTCCGATTGGGGGAGGGCGCCTGGA
AGTTTATTATGGTGGTGGATCACCACGAGGGATGGGGTATAGTGGGCATG
GAGGTGAAGGACCTATGGATTTTGAGACGAAGCGTTGCTCGAACGCAATT
AAGAAGCTGTGCAGCGCGGGGAATGTGACAGAGGTGTTCGCGGTGCTGGA
GGATATGCTGGGGCATGGGCTGGTGCCGGACCTGAAGACGGTGAAGACCA
TCATGCGGACATGCGTGAAGAAGCTGGCCTGGCGACGGGCGGTGCAGCTG
CTGCACACAACAGGCCTGCCGCTGGACGTGGTCATCTTCACAATGGCTAT
CAACACTTGCGGTAAGGCCGGAGAGTGGGAGCAGGGCCTGCGGGTGCTGC
GGGAGATGGACTCTGAGGAGGCCAAGGCCCACGGCATCGTGCCCAACGAG
GTGAGCTACGGGACGGCCATCTCGGCTTGCGGCAAGGCGGGCCGGTGGGA
GCTGGCGCTCTCGCTCTTAAACGAGGTCAAGGATCGCGGCCTGCTCCTCA
ATGATGTTTGTTACGGCGGGGCAATTGATGCCTGCGGGCGCGCGGGTCAG
TGGCAGGAGGCACTCAAGCTTCTGAATGAGATGACGCTGGACGGGGTGGC
GGCCAATGAGGTGTGCTACAACTCGGCCATCTCCGCCTGCGGCAAGGCCG
GGGAGTGGGAGAAGGCGGTGGCTTTGTTGCGCGAGATGCGGGAGCGGGGC
CTGACGCCCGACGAGCTGAACTACAACTCCGCTATCTCGGCCTGCGGCAA
GGCGGCCCAGTGGGCGCACGCCATTCGCCTGCTCCGCGAGATGGCCGTAC
AAGGGTTGTGCCCGGATGTGGTGTCCTACGGGGCGGCCATCGATGCCTGC
CGTAAGGCCGGCAAGTACGACCGAGGCCTGGCGCTGCTGGGCGAGATGCG
CCAGGTGGGCCTGGTGCCCAACGAGGTTTGCTACCACTCGGCGGTCACGG
CCTGCTCCGAGGCAGGCCGGTGGAATGAGGCCCTGTTTGTGCTCTCGGAG
ATGGTCAAGCAAGGCCTCAAGCCGGATGCCATCAGCTACAATGCGGCTGT
GGAGGCCTGCGCCAAGTCGGGAAAGTGGGACGCCCTGGTCATCCTGCTGC
AGGAGACGGCTCGGGACCCGGACACCACACTTTTGGATGCCGTCTACAAC
AATGCCGTCATAACCTGCGCCAAGTACGGCAACTGGGAGTTGGCGGCCAC
CGTGCTGCAGGAGATGGAGTATTTGGGTGGGAATGGTGGAAGTGGGGCGG
GGACGCCGGGCGGCAGCAATAGCAGCAGTCATCCGGGCTTGTCGCCCACC
TCGGCCTCCTACTCTGCGGTCATTGACGCTTGTGCCAAGGCCCTGGCCGC
CGCAGGAGCAGCAGGTGACGGGAGCCCCTCCTCTTCACCCCCCCCCCTTC
CGGCGGCCTGCCCCAGTGGGAGCTGA

protein sequence of NO04G02740.1

>NO04G02740.1-protein ID=NO04G02740.1-protein|Name=NO04G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1075bp
MKKKSHGTDMNEPPTLDCSRGDNTSGYSTESSNSSSGLWSFGGSGRGGNG
STSSNRRGTVSSASSASSGKAPDTPSSHDCVPFTAIGSSLDAPRWPGDGI
AGASTGTNHNPGGVGLSRCMLSSPNPPSSPSPAGLHIRTWDPPPHSPTTY
GSQSEGAAAAAAAAAGAAIQRNGLPSGKEHHLYSGSSSAASSPVSTTLSH
CKKSIPKQHEWSHGGLGNMDPHMSPLSNSGSPSLISPSPTVSNYSFGFQS
PMPSDLESSFANLLLDRTGGSAVEGGACTPRGRAQALQQFQQQQQQQQQH
HHHHYHHHQQQQQQHIQQQQPPQLRHVHGIAVGLGLDDRPPLHNQLQGSP
TSAGLRILTGRQFPSQQHQQQQQEQQQQQEQQEQQEQPLPPQQQPQPPQQ
QQHLHHHHHQQQSLIIQIPASTSAFGSGPSSAPAAGMSNRSHLFLSGSDE
VGLHARGTYSPRLQGQTSPRFLGSTTGGIGGGMNTRGMGGGGGGGNGFHN
RSPRQHHPQQQQGGNSLYMHNVGGGRSSSLSSRGSGGGGMMNGGYGGGSP
HHLMAGGSGRRGGGGGGGGGGSRGGGGGFYSPTGSSSSGMGSPIGGGRLE
VYYGGGSPRGMGYSGHGGEGPMDFETKRCSNAIKKLCSAGNVTEVFAVLE
DMLGHGLVPDLKTVKTIMRTCVKKLAWRRAVQLLHTTGLPLDVVIFTMAI
NTCGKAGEWEQGLRVLREMDSEEAKAHGIVPNEVSYGTAISACGKAGRWE
LALSLLNEVKDRGLLLNDVCYGGAIDACGRAGQWQEALKLLNEMTLDGVA
ANEVCYNSAISACGKAGEWEKAVALLREMRERGLTPDELNYNSAISACGK
AAQWAHAIRLLREMAVQGLCPDVVSYGAAIDACRKAGKYDRGLALLGEMR
QVGLVPNEVCYHSAVTACSEAGRWNEALFVLSEMVKQGLKPDAISYNAAV
EACAKSGKWDALVILLQETARDPDTTLLDAVYNNAVITCAKYGNWELAAT
VLQEMEYLGGNGGSGAGTPGGSNSSSHPGLSPTSASYSAVIDACAKALAA
AGAAGDGSPSSSPPPLPAACPSGS*

mRNA from alignment at chr4:724996..728521-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G02740.1 ID=NO04G02740.1|Name=NO04G02740.1|organism=Nannochloropsis oceanica|type=mRNA|length=3526bp|location=Sequence derived from alignment at chr4:724996..728521- (Nannochloropsis oceanica)
AAAGGACAGGCTAAACGAGGTGTTTTGCGACTTGAGACTCGCCCAACGGC
GATATATCCTAGCCTCCCAATTGCCCCACGTTGACCTCAGGGGACAAGAG
CAAAGGGACGAAATGCCCTACAGCTACCCAGGACGCCTTCATTTCCCGAT
ATCAGACCTCTGACATCACCTTCTTTCTCCTCGATAACATGCGTGTCCCC
AGCTTTAGACAGGAATGTCATATCCTCGTAGGACATAAGGGCGAAAGGTT
CAAGACCCAGCCAGGTGTCTGCTTGAGCGCAGCAACGCTTCTGGACGAAG
GATGAAGAAAAAATCCCACGGCACAGATATGAACGAACCGCCTACCTTGG
ATTGCTCTCGCGGCGATAACACATCCGGCTACAGTACGGAGAGCAGCAAC
AGCAGCAGCGGCCTGTGGTCTTTCGGCGGCAGCGGCAGGGGGGGCAATGG
AAGCACAAGCAGCAACAGGAGAGGGACCGTAAGCAGTGCAAGCAGCGCAA
GCAGTGGCAAGGCCCCCGACACTCCGTCGTCCCACGACTGTGTTCCTTTC
ACTGCAATTGGCTCCTCGCTCGATGCTCCCCGTTGGCCTGGTGATGGGAT
CGCAGGGGCCTCTACCGGCACCAACCACAATCCTGGCGGCGTGGGCTTGA
GTCGGTGTATGTTGTCGTCCCCGAACCCCCCGTCCTCCCCATCGCCCGCA
GGCCTCCACATCCGCACCTGGGATCCACCACCTCATTCCCCGACGACGTA
CGGCAGCCAATCAGAAGGTGCAGCAGCAGCAGCAGCGGCAGCTGCGGGGG
CGGCCATTCAACGTAATGGACTACCTAGCGGGAAGGAGCATCACCTTTAT
TCGGGTTCGTCGTCCGCGGCCTCGTCGCCTGTTTCTACGACGTTGAGCCA
TTGTAAGAAAAGTATACCAAAGCAGCACGAATGGAGCCACGGGGGATTAG
GGAATATGGATCCTCATATGTCTCCCTTGTCAAATAGTGGCTCGCCGTCC
TTGATCTCGCCGAGTCCCACCGTCAGCAACTACAGCTTTGGATTTCAGTC
ACCCATGCCATCTGATCTCGAATCGTCATTTGCAAACCTGCTGCTAGATC
GAACGGGGGGTAGTGCGGTGGAGGGAGGGGCATGCACGCCCCGAGGACGG
GCACAGGCCTTGCAGCAGTTTCAACAGCAGCAGCAGCAGCAGCAGCAGCA
TCATCATCATCATTACCATCATCATCAACAACAGCAGCAGCAGCACATTC
AGCAGCAGCAGCCACCGCAGCTTCGCCACGTGCATGGTATTGCAGTAGGA
CTGGGACTTGATGACCGTCCTCCCCTTCACAATCAACTTCAAGGTTCTCC
TACTTCCGCTGGACTACGCATTCTCACCGGTCGTCAGTTTCCCTCCCAGC
AGCATCAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGGAGCAGCAGGAG
CAGCAGGAGCAGCCGCTGCCGCCGCAGCAGCAGCCACAGCCGCCACAGCA
GCAGCAGCACCTCCACCACCACCACCACCAGCAGCAGTCGCTCATAATCC
AGATCCCAGCGTCGACCTCTGCCTTTGGCTCGGGTCCGAGCAGTGCTCCC
GCCGCAGGGATGAGCAATCGAAGCCATCTCTTCTTGAGTGGTAGTGATGA
GGTCGGGCTCCACGCTCGGGGCACGTACTCTCCACGCCTGCAAGGGCAGA
CTTCACCTCGTTTCCTGGGCAGCACTACGGGAGGGATTGGGGGAGGGATG
AACACGAGGGGCATGGGTGGAGGGGGAGGGGGTGGGAACGGTTTTCACAA
CCGATCTCCTCGGCAGCATCATCCCCAGCAACAGCAGGGGGGCAATTCTC
TGTATATGCATAATGTAGGGGGAGGGCGGAGCAGCAGCTTAAGTAGTCGT
GGTAGTGGTGGTGGAGGAATGATGAATGGTGGGTATGGTGGAGGGTCTCC
GCACCACTTAATGGCTGGCGGAAGTGGTCGACGTGGAGGAGGAGGAGGAG
GAGGAGGAGGCGGAAGCCGTGGTGGTGGCGGAGGGTTTTATTCGCCGACG
GGATCGAGTAGTAGTGGGATGGGGAGTCCGATTGGGGGAGGGCGCCTGGA
AGTTTATTATGGTGGTGGATCACCACGAGGGATGGGGTATAGTGGGCATG
GAGGTGAAGGACCTATGGATTTTGAGACGAAGCGTTGCTCGAACGCAATT
AAGAAGCTGTGCAGCGCGGGGAATGTGACAGAGGTGTTCGCGGTGCTGGA
GGATATGCTGGGGCATGGGCTGGTGCCGGACCTGAAGACGGTGAAGACCA
TCATGCGGACATGCGTGAAGAAGCTGGCCTGGCGACGGGCGGTGCAGCTG
CTGCACACAACAGGCCTGCCGCTGGACGTGGTCATCTTCACAATGGCTAT
CAACACTTGCGGTAAGGCCGGAGAGTGGGAGCAGGGCCTGCGGGTGCTGC
GGGAGATGGACTCTGAGGAGGCCAAGGCCCACGGCATCGTGCCCAACGAG
GTGAGCTACGGGACGGCCATCTCGGCTTGCGGCAAGGCGGGCCGGTGGGA
GCTGGCGCTCTCGCTCTTAAACGAGGTCAAGGATCGCGGCCTGCTCCTCA
ATGATGTTTGTTACGGCGGGGCAATTGATGCCTGCGGGCGCGCGGGTCAG
TGGCAGGAGGCACTCAAGCTTCTGAATGAGATGACGCTGGACGGGGTGGC
GGCCAATGAGGTGTGCTACAACTCGGCCATCTCCGCCTGCGGCAAGGCCG
GGGAGTGGGAGAAGGCGGTGGCTTTGTTGCGCGAGATGCGGGAGCGGGGC
CTGACGCCCGACGAGCTGAACTACAACTCCGCTATCTCGGCCTGCGGCAA
GGCGGCCCAGTGGGCGCACGCCATTCGCCTGCTCCGCGAGATGGCCGTAC
AAGGGTTGTGCCCGGATGTGGTGTCCTACGGGGCGGCCATCGATGCCTGC
CGTAAGGCCGGCAAGTACGACCGAGGCCTGGCGCTGCTGGGCGAGATGCG
CCAGGTGGGCCTGGTGCCCAACGAGGTTTGCTACCACTCGGCGGTCACGG
CCTGCTCCGAGGCAGGCCGGTGGAATGAGGCCCTGTTTGTGCTCTCGGAG
ATGGTCAAGCAAGGCCTCAAGCCGGATGCCATCAGCTACAATGCGGCTGT
GGAGGCCTGCGCCAAGTCGGGAAAGTGGGACGCCCTGGTCATCCTGCTGC
AGGAGACGGCTCGGGACCCGGACACCACACTTTTGGATGCCGTCTACAAC
AATGCCGTCATAACCTGCGCCAAGTACGGCAACTGGGAGTTGGCGGCCAC
CGTGCTGCAGGAGATGGAGTATTTGGGTGGGAATGGTGGAAGTGGGGCGG
GGACGCCGGGCGGCAGCAATAGCAGCAGTCATCCGGGCTTGTCGCCCACC
TCGGCCTCCTACTCTGCGGTCATTGACGCTTGTGCCAAGGCCCTGGCCGC
CGCAGGAGCAGCAGGTGACGGGAGCCCCTCCTCTTCACCCCCCCCCCTTC
CGGCGGCCTGCCCCAGTGGGAGCTGA

Coding sequence (CDS) from alignment at chr4:724996..728521-

>NO04G02740.1 ID=NO04G02740.1|Name=NO04G02740.1|organism=Nannochloropsis oceanica|type=CDS|length=3225bp|location=Sequence derived from alignment at chr4:724996..728521- (Nannochloropsis oceanica)
ATGAAGAAAAAATCCCACGGCACAGATATGAACGAACCGCCTACCTTGGA
TTGCTCTCGCGGCGATAACACATCCGGCTACAGTACGGAGAGCAGCAACA
GCAGCAGCGGCCTGTGGTCTTTCGGCGGCAGCGGCAGGGGGGGCAATGGA
AGCACAAGCAGCAACAGGAGAGGGACCGTAAGCAGTGCAAGCAGCGCAAG
CAGTGGCAAGGCCCCCGACACTCCGTCGTCCCACGACTGTGTTCCTTTCA
CTGCAATTGGCTCCTCGCTCGATGCTCCCCGTTGGCCTGGTGATGGGATC
GCAGGGGCCTCTACCGGCACCAACCACAATCCTGGCGGCGTGGGCTTGAG
TCGGTGTATGTTGTCGTCCCCGAACCCCCCGTCCTCCCCATCGCCCGCAG
GCCTCCACATCCGCACCTGGGATCCACCACCTCATTCCCCGACGACGTAC
GGCAGCCAATCAGAAGGTGCAGCAGCAGCAGCAGCGGCAGCTGCGGGGGC
GGCCATTCAACGTAATGGACTACCTAGCGGGAAGGAGCATCACCTTTATT
CGGGTTCGTCGTCCGCGGCCTCGTCGCCTGTTTCTACGACGTTGAGCCAT
TGTAAGAAAAGTATACCAAAGCAGCACGAATGGAGCCACGGGGGATTAGG
GAATATGGATCCTCATATGTCTCCCTTGTCAAATAGTGGCTCGCCGTCCT
TGATCTCGCCGAGTCCCACCGTCAGCAACTACAGCTTTGGATTTCAGTCA
CCCATGCCATCTGATCTCGAATCGTCATTTGCAAACCTGCTGCTAGATCG
AACGGGGGGTAGTGCGGTGGAGGGAGGGGCATGCACGCCCCGAGGACGGG
CACAGGCCTTGCAGCAGTTTCAACAGCAGCAGCAGCAGCAGCAGCAGCAT
CATCATCATCATTACCATCATCATCAACAACAGCAGCAGCAGCACATTCA
GCAGCAGCAGCCACCGCAGCTTCGCCACGTGCATGGTATTGCAGTAGGAC
TGGGACTTGATGACCGTCCTCCCCTTCACAATCAACTTCAAGGTTCTCCT
ACTTCCGCTGGACTACGCATTCTCACCGGTCGTCAGTTTCCCTCCCAGCA
GCATCAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGGAGCAGCAGGAGC
AGCAGGAGCAGCCGCTGCCGCCGCAGCAGCAGCCACAGCCGCCACAGCAG
CAGCAGCACCTCCACCACCACCACCACCAGCAGCAGTCGCTCATAATCCA
GATCCCAGCGTCGACCTCTGCCTTTGGCTCGGGTCCGAGCAGTGCTCCCG
CCGCAGGGATGAGCAATCGAAGCCATCTCTTCTTGAGTGGTAGTGATGAG
GTCGGGCTCCACGCTCGGGGCACGTACTCTCCACGCCTGCAAGGGCAGAC
TTCACCTCGTTTCCTGGGCAGCACTACGGGAGGGATTGGGGGAGGGATGA
ACACGAGGGGCATGGGTGGAGGGGGAGGGGGTGGGAACGGTTTTCACAAC
CGATCTCCTCGGCAGCATCATCCCCAGCAACAGCAGGGGGGCAATTCTCT
GTATATGCATAATGTAGGGGGAGGGCGGAGCAGCAGCTTAAGTAGTCGTG
GTAGTGGTGGTGGAGGAATGATGAATGGTGGGTATGGTGGAGGGTCTCCG
CACCACTTAATGGCTGGCGGAAGTGGTCGACGTGGAGGAGGAGGAGGAGG
AGGAGGAGGCGGAAGCCGTGGTGGTGGCGGAGGGTTTTATTCGCCGACGG
GATCGAGTAGTAGTGGGATGGGGAGTCCGATTGGGGGAGGGCGCCTGGAA
GTTTATTATGGTGGTGGATCACCACGAGGGATGGGGTATAGTGGGCATGG
AGGTGAAGGACCTATGGATTTTGAGACGAAGCGTTGCTCGAACGCAATTA
AGAAGCTGTGCAGCGCGGGGAATGTGACAGAGGTGTTCGCGGTGCTGGAG
GATATGCTGGGGCATGGGCTGGTGCCGGACCTGAAGACGGTGAAGACCAT
CATGCGGACATGCGTGAAGAAGCTGGCCTGGCGACGGGCGGTGCAGCTGC
TGCACACAACAGGCCTGCCGCTGGACGTGGTCATCTTCACAATGGCTATC
AACACTTGCGGTAAGGCCGGAGAGTGGGAGCAGGGCCTGCGGGTGCTGCG
GGAGATGGACTCTGAGGAGGCCAAGGCCCACGGCATCGTGCCCAACGAGG
TGAGCTACGGGACGGCCATCTCGGCTTGCGGCAAGGCGGGCCGGTGGGAG
CTGGCGCTCTCGCTCTTAAACGAGGTCAAGGATCGCGGCCTGCTCCTCAA
TGATGTTTGTTACGGCGGGGCAATTGATGCCTGCGGGCGCGCGGGTCAGT
GGCAGGAGGCACTCAAGCTTCTGAATGAGATGACGCTGGACGGGGTGGCG
GCCAATGAGGTGTGCTACAACTCGGCCATCTCCGCCTGCGGCAAGGCCGG
GGAGTGGGAGAAGGCGGTGGCTTTGTTGCGCGAGATGCGGGAGCGGGGCC
TGACGCCCGACGAGCTGAACTACAACTCCGCTATCTCGGCCTGCGGCAAG
GCGGCCCAGTGGGCGCACGCCATTCGCCTGCTCCGCGAGATGGCCGTACA
AGGGTTGTGCCCGGATGTGGTGTCCTACGGGGCGGCCATCGATGCCTGCC
GTAAGGCCGGCAAGTACGACCGAGGCCTGGCGCTGCTGGGCGAGATGCGC
CAGGTGGGCCTGGTGCCCAACGAGGTTTGCTACCACTCGGCGGTCACGGC
CTGCTCCGAGGCAGGCCGGTGGAATGAGGCCCTGTTTGTGCTCTCGGAGA
TGGTCAAGCAAGGCCTCAAGCCGGATGCCATCAGCTACAATGCGGCTGTG
GAGGCCTGCGCCAAGTCGGGAAAGTGGGACGCCCTGGTCATCCTGCTGCA
GGAGACGGCTCGGGACCCGGACACCACACTTTTGGATGCCGTCTACAACA
ATGCCGTCATAACCTGCGCCAAGTACGGCAACTGGGAGTTGGCGGCCACC
GTGCTGCAGGAGATGGAGTATTTGGGTGGGAATGGTGGAAGTGGGGCGGG
GACGCCGGGCGGCAGCAATAGCAGCAGTCATCCGGGCTTGTCGCCCACCT
CGGCCTCCTACTCTGCGGTCATTGACGCTTGTGCCAAGGCCCTGGCCGCC
GCAGGAGCAGCAGGTGACGGGAGCCCCTCCTCTTCACCCCCCCCCCTTCC
GGCGGCCTGCCCCAGTGGGAGCTGA

Synonyms

Publications