NO03G05690.1, NO03G05690.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G05690.1
Unique NameNO03G05690.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2093
Alignment locationchr3:1637101..1639673 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1637101..1639673 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO03G05690.1 vs.
Match: XP_005855028.1 (acetylserotonin o-methyltransferase-like protein [Nannochloropsis gaditana CCMP526]; EKU21326.1 acetylserotonin o-methyltransferase-like protein [Nannochloropsis gaditana CCMP526]; EWM30044.1 acetylserotonin o-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 318.2 bits (814), Expect = 2.800e-83
Identity = 177/282 (62.77%), Postives = 209/282 (74.11%), Query Frame = 0 
Query:   16 FLLIAAASVLSWYSPPTALAFVLPAHRLHPASACFNTMSASSPSSTPSDTSTTLIPHLSTLKSSATLILASKSPRRQEIMQLMGFSPDEFSVMPSDFPEDLDKKAFANPADYAQKNAELKALDIATKLFR-EVDGEV----------KNTILVIGSDTIVDLDGTILEKPDDEAHAHAMLSSLSGRQHLVHSGVAVFSSKGPRSKTNGTPLPVVSFCESTRVTFATLTSEEIWSYVRSGEPMDKAGAYGIQGLGGQMVRGIDGCYFTVMGLPMHRLSAALAQ 287
            F L+ A + L+W     A  F  P  R     +    MSA++PS T    S+TL+P+LS  K+   LILASKSPRRQEI+QLMGF   +F V+PSDFPEDLDK+ F NPADYAQKNAE KA ++ATKLF     G+V          K T +VIGSDTIVD DG ILEKP+D  HA+AMLSSLSGR HLVHSGVA++SSKGP+S  +G PLPVVSFCE+ RV FA L+ EEIW+Y+RSGEPMDKAG YGIQGLGGQ+VRGI+GCYFTVMG+PMH+LS ALAQ
Sbjct:   10 FPLVNAETCLTWRPSFVAFHFWCPISRFRLIISPL-AMSAAAPSRT----SSTLLPYLSIFKTKVNLILASKSPRRQEILQLMGFDSKDFVVLPSDFPEDLDKRNFINPADYAQKNAECKAQEVATKLFGGSSSGDVGKVGGQRDAGKKTTIVIGSDTIVDRDGIILEKPEDAQHAYAMLSSLSGRTHLVHSGVAIYSSKGPKSG-DGIPLPVVSFCETARVDFAPLSEEEIWNYIRSGEPMDKAGGYGIQGLGGQVVRGIEGCYFTVMGMPMHKLSVALAQ 285
The following BLAST results are available for this feature:
BLAST of NO03G05690.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005855028.12.800e-8362.77acetylserotonin o-methyltransferase-like protein [... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G05690NO03G05690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G05690.1NO03G05690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G05690.1.cds1NO03G05690.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G05690.1.cds2NO03G05690.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G05690.1.cds3NO03G05690.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G05690.1 ID=NO03G05690.1|Name=NO03G05690.1|organism=Nannochloropsis oceanica|type=mRNA|length=2093bp
GGTGGAGGGAGGGAGGCCCCCAGCTGGCAGTGGCTGGAGAGGATTGTGTG
GAGGGAGTGGAAGACACGCCCGTCCAACGGCACAACCACACGCGAAGGTG
ACATAGGCGAGGAGCAAGGAGGAGGCGATGAAGCGGGGAAGGGGGTAGCA
GAGTTGCTGGTTGGCCGGGTCTTGACGTAAAAAATCAGATCGCGAGGGCT
GGCCCCACTGTCAGTGGCGAAGGACGACTTAGGGGAGGAAGATGAGAAGG
GGGAGGAAGAAGGAGACGCGCCATCAAGATAGTTATTTAACCATTTGAGG
TTTTCGGAGTTGATGCTCCGTTCTCGAGGGTAGTGCGTAAAGAAATCTGG
GTGGACTGTTGTGTGAAAAGGGAGAGGGGAGGGTAAGAAAGGACGGTAAG
GATTTGGGCGTTTGGTTAGGGATAGGAGAAAGATTGTGTACGGGAACTAT
GAAGGTGTGCATACCTTGCAGCAGAAACTGTCGTTTGATGAGAGTGGTGG
GATCCATGCCACTGCTGCCAGAGGATGAGGCAGTGTGACTGCTCCTGTTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTACTACTACTGCTACAGCAGCCCGTCCAGATGTGGCGAG
GACGAAGGCGTGGACGCAAGCTTCGCATGATGCTACCTCCACGTCCAACA
AAGCTGGTAATAGTGCGCAATGTGGGGTGCCGTGTTCGATGAGGAAGGGC
TGCCAGAACAATCCAAGTGCCGGGGGGGATAGAGGACGGAGGAAGGCTGC
TGGGAATGAGGATGGCACGGTGTCGGTGGCGGCCTGGGCAGAGATGTCAA
ATTGTGCCGAAGACTGTGCGCCTGTGCGTGTGCGCGCGGGGCTGTGCTGT
GATCTGAAAGGGGTTGCGTGTCGTGCAGGGGCGGAGTTGGATCGAATCAA
TAAAGCTGCCAGCTGGCAAGCTTCTCTAAAATCAAACTATCCGTGACCGC
GGTGCCGTCATACAGAAATTCTTCCAATTCAACACCTAGGGCATGCTGCA
TTCCAATATGCTACATCCCACCCCACTCAGCATCCACTCCCACAGCTTCC
CAACCCTCCGCGCCCTGCGAGTTTGGCTTTTTGCAATTCATTGAATGCAT
ACTCTCCATCTCCGGTCTTCCCAGAGCCCAAGCCGCCAGTTCCTTCTTAT
TGCCGCAGCCTCTGTCTTGTCTTGGTACTCGCCGCCTACAGCGCTTGCGT
TTGTGCTTCCTGCTCATCGACTTCACCCTGCTTCCGCCTGCTTCAACACT
ATGTCCGCCTCATCCCCATCCTCCACTCCCTCGGACACGTCCACCACACT
CATCCCCCATTTGAGCACCCTCAAGAGCTCGGCCACGTTGATCCTCGCCT
CCAAAAGCCCTCGGCGGCAAGAGATTATGCAGCTGATGGGCTTTAGTCCC
GACGAATTTTCGGTAATGCCGAGCGACTTTCCCGAGGACTTGGACAAAAA
AGCCTTTGCCAATCCCGCGGACTACGCCCAGAAAAACGCTGAACTCAAGG
CTCTAGATATAGCGACCAAGCTCTTTAGAGAGGTAGACGGAGAGGTAAAG
AATACGATTCTTGTCATTGGCTCCGATACCATCGTGGACCTTGATGGCAC
CATTTTGGAAAAGCCTGACGATGAGGCGCATGCGCATGCCATGCTTTCCT
CCCTCTCCGGACGACAACACCTGGTGCATTCAGGCGTGGCCGTGTTCAGC
TCCAAGGGCCCGCGAAGCAAAACAAATGGAACTCCGTTGCCTGTTGTGTC
GTTCTGCGAGTCGACACGGGTGACTTTCGCGACCTTGACCTCGGAGGAAA
TATGGAGTTACGTCCGCTCCGGTGAGCCGATGGATAAGGCGGGTGCCTAT
GGAATCCAGGGGCTTGGGGGGCAGATGGTGCGAGGGATCGACGGCTGCTA
TTTTACTGTCATGGGGTTGCCCATGCATAGGCTGAGCGCCGCGCTGGCCC
AAGTCATCATAAAAGGATTGCTGTAGAGTGTGAAATGTAGAACAAATGAT
TATCCAACAGAATAGAAAAGAATTACAAGTACTGAGTGCCAGA
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protein sequence of NO03G05690.1

>NO03G05690.1-protein ID=NO03G05690.1-protein|Name=NO03G05690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MHTLHLRSSQSPSRQFLLIAAASVLSWYSPPTALAFVLPAHRLHPASACF
NTMSASSPSSTPSDTSTTLIPHLSTLKSSATLILASKSPRRQEIMQLMGF
SPDEFSVMPSDFPEDLDKKAFANPADYAQKNAELKALDIATKLFREVDGE
VKNTILVIGSDTIVDLDGTILEKPDDEAHAHAMLSSLSGRQHLVHSGVAV
FSSKGPRSKTNGTPLPVVSFCESTRVTFATLTSEEIWSYVRSGEPMDKAG
AYGIQGLGGQMVRGIDGCYFTVMGLPMHRLSAALAQVIIKGLL*
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mRNA from alignment at chr3:1637101..1639673+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G05690.1 ID=NO03G05690.1|Name=NO03G05690.1|organism=Nannochloropsis oceanica|type=mRNA|length=2573bp|location=Sequence derived from alignment at chr3:1637101..1639673+ (Nannochloropsis oceanica)
GGTGGAGGGAGGGAGGCCCCCAGCTGGCAGTGGCTGGAGAGGATTGTGTG
GAGGGAGTGGAAGACACGCCCGTCCAACGGCACAACCACACGCGAAGGTG
ACATAGGCGAGGAGCAAGGAGGAGGCGATGAAGCGGGGAAGGGGGTAGCA
GAGTTGCTGGTTGGCCGGGTCTTGACGTAAAAAATCAGATCGCGAGGGCT
GGCCCCACTGTCAGTGGCGAAGGACGACTTAGGGGAGGAAGATGAGAAGG
GGGAGGAAGAAGGAGACGCGCCATCAAGATAGTTATTTAACCATTTGAGG
TTTTCGGAGTTGATGCTCCGTTCTCGAGGGTAGTGCGTAAAGAAATCTGG
GTGGACTGTTGTGTGAAAAGGGAGAGGGGAGGGTAAGAAAGGACGGTAAG
GATTTGGGCGTTTGGTTAGGGATAGGAGAAAGATTGTGTACGGGAACTAT
GAAGGTGTGCATACCTTGCAGCAGAAACTGTCGTTTGATGAGAGTGGTGG
GATCCATGCCACTGCTGCCAGAGGATGAGGCAGTGTGACTGCTCCTGTTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTACTACTACTGCTACAGCAGCCCGTCCAGATGTGGCGAG
GACGAAGGCGTGGACGCAAGCTTCGCATGATGCTACCTCCACGTCCAACA
AAGCTGGTAATAGTGCGCAATGTGGGGTGCCGTGTTCGATGAGGAAGGGC
TGCCAGAACAATCCAAGTGCCGGGGGGGATAGAGGACGGAGGAAGGCTGC
TGGGAATGAGGATGGCACGGTGTCGGTGGCGGCCTGGGCAGAGATGTCAA
ATTGTGCCGAAGACTGTGCGCCTGTGCGTGTGCGCGCGGGGCTGTGCTGT
GATCTGAAAGGGGTTGCGTGTCGTGCAGGGGCGGAGTTGGATCGAATCAA
TAAAGCTGCCAGCTGGCAAGCTTCTCTAAAATCAAACTATCCGTGACCGC
GGTGCCGTCATACAGAAATTCTTCCAATTCAACACCTAGGGCATGCTGCA
TTCCAATATGCTACATCCCACCCCACTCAGCATCCACTCCCACAGCTTCC
CAACCCTCCGCGCCCTGCGAGTTTGGCTTTTTGCAATTCATTGAATGCAT
ACTCTCCATCTCCGGTCTTCCCAGAGCCCAAGCCGCCAGTTCCTTCTTAT
TGCCGCAGCCTCTGTCTTGTCTTGGTACTCGCCGCCTACAGCGCTTGCGT
TTGTGCTTCCTGCTCATCGACTTCACCCTGCTTCCGCCTGCTTCAACACT
ATGTCCGCCTCATCCCCATCCTCCACTCCCTCGGACACGTCCACCACACT
CATCCCCCATTTGAGCACCCTCAAGAGCTCGGCCACGTTGATCCTCGCCT
CCAAAAGCCCTCGGCGGCAAGAGATTATGCAGCTGATGGGCTTTAGTCCC
GACGAATTTTCGGTAATGCCGAGCGACTTTCCCGAGGACTTGGACAAAAA
AGGTACCAACTTCATACGGAGGATGGACGAGGGAGAAAGGCAGGGAGGGA
GGGATGGGGATATGAAAGGGAATAGAGTAAGAGAGATGGGGATATGGAAG
AGAATGGAGTAAGAGATGCATGGTAGCGGGAGTTTCAGAGGGGAGGGGAT
GCATCAACTGTACTCACTTAGTCATATGGTTGTCAACTCATCTCTTTCCC
ATTTCTTATTCCCTTCCTCCTTCTTCCCCCACATGTCCTCCAGCCTTTGC
CAATCCCGCGGACTACGCCCAGAAAAACGCTGAACTCAAGGCTCTAGATA
TAGCGACCAAGCTCTTTAGAGAGGTAGACGGAGAGGTAAAGAATACGATT
CTTGTCATTGGCTCCGATACCATGTACGTGCCTCCAACAGAGGAAGAGAG
GGAGAAAGAGACGGAAATAGGGTCATGCAGACTGAAGGAATTAATGAAAA
GGTCCTTAATCTGCCGAGCTTTGGCTAAATTATATCTCGGAGGGTACACC
AAATAGACGATATGCGTACCATTCTGATTTTGATGCCATGTCTTTGCTTA
TCCCCCCTCTCCACCTCTTTTCCCTCCCTCCCTCCCTCTTTACCATCGAT
CCCCTTTTCCAGCGTGGACCTTGATGGCACCATTTTGGAAAAGCCTGACG
ATGAGGCGCATGCGCATGCCATGCTTTCCTCCCTCTCCGGACGACAACAC
CTGGTGCATTCAGGCGTGGCCGTGTTCAGCTCCAAGGGCCCGCGAAGCAA
AACAAATGGAACTCCGTTGCCTGTTGTGTCGTTCTGCGAGTCGACACGGG
TGACTTTCGCGACCTTGACCTCGGAGGAAATATGGAGTTACGTCCGCTCC
GGTGAGCCGATGGATAAGGCGGGTGCCTATGGAATCCAGGGGCTTGGGGG
GCAGATGGTGCGAGGGATCGACGGCTGCTATTTTACTGTCATGGGGTTGC
CCATGCATAGGCTGAGCGCCGCGCTGGCCCAAGTCATCATAAAAGGATTG
CTGTAGAGTGTGAAATGTAGAACAAATGATTATCCAACAGAATAGAAAAG
AATTACAAGTACTGAGTGCCAGA
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Coding sequence (CDS) from alignment at chr3:1637101..1639673+

>NO03G05690.1 ID=NO03G05690.1|Name=NO03G05690.1|organism=Nannochloropsis oceanica|type=CDS|length=882bp|location=Sequence derived from alignment at chr3:1637101..1639673+ (Nannochloropsis oceanica)
ATGCATACTCTCCATCTCCGGTCTTCCCAGAGCCCAAGCCGCCAGTTCCT
TCTTATTGCCGCAGCCTCTGTCTTGTCTTGGTACTCGCCGCCTACAGCGC
TTGCGTTTGTGCTTCCTGCTCATCGACTTCACCCTGCTTCCGCCTGCTTC
AACACTATGTCCGCCTCATCCCCATCCTCCACTCCCTCGGACACGTCCAC
CACACTCATCCCCCATTTGAGCACCCTCAAGAGCTCGGCCACGTTGATCC
TCGCCTCCAAAAGCCCTCGGCGGCAAGAGATTATGCAGCTGATGGGCTTT
AGTCCCGACGAATTTTCGGTAATGCCGAGCGACTTTCCCGAGGACTTGGA
CAAAAAAGCCTTTGCCAATCCCGCGGACTACGCCCAGAAAAACGCTGAAC
TCAAGGCTCTAGATATAGCGACCAAGCTCTTTAGAGAGGTAGACGGAGAG
GTAAAGAATACGATTCTTGTCATTGGCTCCGATACCATCGTGGACCTTGA
TGGCACCATTTTGGAAAAGCCTGACGATGAGGCGCATGCGCATGCCATGC
TTTCCTCCCTCTCCGGACGACAACACCTGGTGCATTCAGGCGTGGCCGTG
TTCAGCTCCAAGGGCCCGCGAAGCAAAACAAATGGAACTCCGTTGCCTGT
TGTGTCGTTCTGCGAGTCGACACGGGTGACTTTCGCGACCTTGACCTCGG
AGGAAATATGGAGTTACGTCCGCTCCGGTGAGCCGATGGATAAGGCGGGT
GCCTATGGAATCCAGGGGCTTGGGGGGCAGATGGTGCGAGGGATCGACGG
CTGCTATTTTACTGTCATGGGGTTGCCCATGCATAGGCTGAGCGCCGCGC
TGGCCCAAGTCATCATAAAAGGATTGCTGTAG
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Synonyms
Publications