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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr3 | genome | chr3:1500032..1503699 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO03G05260.2 vs.
Match: EWM29972.1 (pyruvate kinase [Nannochloropsis gaditana]) HSP 1 Score: 905.6 bits (2339), Expect = 7.500e-260 Identity = 456/552 (82.61%), Postives = 499/552 (90.40%), Query Frame = 0
Query: 2 LVLRRTASRRCLLQSSST----RLLAPSPVAVSQRQKVDYIPSFIESRKSLTKIIATIGPASEQFPELQACVKSGMRIMRLNFSHATYEEATLRINNLRKSHGVHSAAMGSTFNLRAVLLDIQGPKIRTGSFKEGSIMLEQGKEYILTTDESVKLTGDEKQFYVDYEPLYGSTKKGDPVLIDDGNVVLEVTGHVGDGHGVICKALNSGKIKNRRGVNVPNSKVDLPALTVKDQADLSFGVQNDIDFVAASFVRKAQDIHDIRAYLAQEMSKHWPATHLPPKIIAKIESTEAIQNYEEIMEAADGIMVARGDLGVEIDQADVTNMQKMMVRRCRSVGKPVIVATQMLESMQVNPRPTRAEVSDVTNAVYDGADCVMLSGESAQGKYPIESIATMRTIIDAAETWIDRNPVHQGKLILRNIEKHE-ALTNQPVSFYEAAASAAVQAAFRLKAKVIIVHTKDGSLAKTVAKYSPFVPCMCFTNSQKVAKQLIIHRGLHPIVIPDGHLWNTNKDVVLDHVKRLGFAGQGDRVVVLTGELQHEGSTSTSGTYYMDVK 549
++L R A+RRC+ + S R+ S + V R KVDYIPSF ESRKSLTKI+ATIGPASEQFPELQACVKSGMRIMRLNFSHATYEEA+LRI NLRKSHGVHS A+G+ FNLRAVLLDIQGPKIRTGSFKEGSI+L+QG+EY LTTDESVKL+GDEK+FYVDY+PL+ STKKGDPVLIDDGNVVLEV GH DG GV+C+ALNSGKIKNRRGVNVP SKVDLPALT KD+ADLSFG+QND+DFVAASFVRKAQDI DIRAYL +EMSK WPATHL PKIIAK+ESTEAIQNYEEIM+AADGIMVARGDLGVEIDQADVTNMQKMM+RRCRSVGKPVIVATQMLESMQ+NPRPTRAEVSDVTNAVYDGADCVMLSGESAQGKYP+ES+ATMR+IIDAAETWI RNPVHQ KLILRN+EKHE + + P SFY+AAASAAVQAAFRLKAK IIVHT++G+LA+TVAKY PFVPCMCFT SQKVAKQLIIHRGLHPIVIP+GHLW NK VLDH +RLGF +GDRVVVLTGELQHEGS TSGTY+MDVK
Sbjct: 1 MLLLRAAARRCVTKCPSAVLQPRVNDSSFILVPNRPKVDYIPSFEESRKSLTKIVATIGPASEQFPELQACVKSGMRIMRLNFSHATYEEASLRIQNLRKSHGVHSQAIGAAFNLRAVLLDIQGPKIRTGSFKEGSILLKQGQEYELTTDESVKLSGDEKRFYVDYKPLFTSTKKGDPVLIDDGNVVLEVVGHREDGQGVLCRALNSGKIKNRRGVNVPKSKVDLPALTTKDKADLSFGIQNDVDFVAASFVRKAQDILDIRAYLKEEMSKFWPATHLLPKIIAKVESTEAIQNYEEIMQAADGIMVARGDLGVEIDQADVTNMQKMMIRRCRSVGKPVIVATQMLESMQINPRPTRAEVSDVTNAVYDGADCVMLSGESAQGKYPVESVATMRSIIDAAETWISRNPVHQHKLILRNMEKHETGIMDAPASFYDAAASAAVQAAFRLKAKCIIVHTEEGTLARTVAKYHPFVPCMCFTGSQKVAKQLIIHRGLHPIVIPNGHLWRENKAAVLDHARRLGFVQRGDRVVVLTGELQHEGSNMTSGTYFMDVK 552
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO03G05260.2 ID=NO03G05260.2|Name=NO03G05260.2|organism=Nannochloropsis oceanica|type=mRNA|length=1947bp ACCACAGGAAGTAACAACTCGCGTGAATTGTTTCGTCTTGTCCGCTTCCT CCTTCCCCCACCGCCCACCACCAGCCTAAACTCAAGCAAAATTATGCTCG TTCTACGTCGGACCGCCAGCCGCCGCTGCCTGCTCCAGAGCAGCAGCACT CGTCTCCTTGCCCCATCCCCCGTGGCCGTGTCGCAGCGGCAAAAGGTGGA TTATATTCCTTCCTTTATCGAGTCCCGCAAGAGCCTGACGAAAATCATCG CCACCATTGGTCCCGCCTCGGAGCAATTTCCCGAGCTGCAGGCTTGCGTC AAGAGCGGCATGCGAATCATGCGGCTCAACTTCTCACATGCCACGTACGA AGAGGCCACGCTTCGGATCAACAATCTTCGTAAGTCCCACGGCGTGCACT CGGCAGCCATGGGCTCCACGTTCAATTTGCGAGCCGTCCTACTGGATATC CAAGGCCCCAAAATTCGGACAGGTTCCTTCAAGGAAGGGAGCATCATGCT AGAGCAAGGCAAGGAGTACATCTTGACCACGGACGAGAGCGTGAAATTAA CGGGGGACGAGAAACAGTTCTATGTGGATTATGAGCCCCTGTATGGATCT ACCAAAAAGGGCGACCCCGTGCTGATCGATGACGGTAACGTCGTCTTGGA GGTCACCGGGCATGTGGGGGACGGCCATGGCGTCATTTGCAAGGCCCTCA ACTCCGGAAAGATCAAAAACAGACGAGGCGTTAATGTGCCGAACAGCAAG GTGGACCTGCCCGCTCTGACCGTCAAAGACCAAGCCGACCTTTCCTTCGG CGTCCAAAATGACATCGATTTTGTCGCCGCCTCCTTCGTCCGCAAGGCCC AAGACATTCATGATATCCGGGCGTATCTTGCCCAGGAGATGTCGAAGCAC TGGCCTGCGACGCACTTGCCCCCTAAGATCATTGCCAAGATCGAATCGAC GGAAGCGATTCAGAATTATGAGGAGATCATGGAAGCTGCCGATGGCATCA TGGTGGCTCGTGGGGATTTGGGGGTGGAGATCGATCAGGCCGACGTGACC AACATGCAGAAGATGATGGTCCGCCGGTGTCGCAGCGTGGGGAAGCCTGT CATTGTCGCAACTCAGATGCTTGAGTCGATGCAGGTTAATCCCCGCCCGA CCCGCGCGGAAGTTTCTGATGTCACGAACGCTGTCTACGACGGAGCCGAC TGTGTGATGCTCTCGGGTGAAAGCGCCCAAGGAAAGTATCCTATCGAGTC CATCGCGACCATGCGCACCATCATCGACGCCGCTGAAACTTGGATCGATC GTAATCCCGTCCACCAGGGAAAATTAATCTTACGGAACATCGAAAAGCAT GAGGCCCTGACCAACCAGCCCGTGAGCTTTTATGAGGCGGCGGCCAGCGC GGCGGTCCAGGCGGCGTTTCGATTGAAAGCTAAGGTTATTATTGTGCATA CAAAGGACGGGTCATTGGCCAAGACCGTGGCAAAGTACTCCCCTTTCGTC CCATGCATGTGTTTCACCAACTCTCAGAAGGTTGCGAAGCAGCTCATCAT CCATCGCGGTCTTCATCCCATCGTCATTCCGGACGGCCACCTGTGGAATA CCAACAAGGACGTTGTACTGGACCATGTGAAAAGGCTGGGCTTCGCAGGC CAGGGAGACCGCGTTGTTGTGCTGACGGGTGAACTGCAACACGAGGGATC CACGTCGACAAGCGGGACGTACTATATGGATGTTAAATAGAAGGAGGAAA TGGCTTATAAAAGTAAAGCGAACGTGAACGAAGAAACCAAAGACAAAGAC GGGAGGGAGGAGGAGAAACGGAGGAGGCAGAAAGGAAATTACGGCGATAC ACGCCTCGAGGAGGTAAAGAGAAATTAATACAGTTTTGAATCGACTGACG CTTGTCAGCGCCTCCAAAAGAAAAATATATAAGAAGGCTCATTGATG back to topprotein sequence of NO03G05260.2 >NO03G05260.2-protein ID=NO03G05260.2-protein|Name=NO03G05260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=549bp MLVLRRTASRRCLLQSSSTRLLAPSPVAVSQRQKVDYIPSFIESRKSLTK IIATIGPASEQFPELQACVKSGMRIMRLNFSHATYEEATLRINNLRKSHG VHSAAMGSTFNLRAVLLDIQGPKIRTGSFKEGSIMLEQGKEYILTTDESV KLTGDEKQFYVDYEPLYGSTKKGDPVLIDDGNVVLEVTGHVGDGHGVICK ALNSGKIKNRRGVNVPNSKVDLPALTVKDQADLSFGVQNDIDFVAASFVR KAQDIHDIRAYLAQEMSKHWPATHLPPKIIAKIESTEAIQNYEEIMEAAD GIMVARGDLGVEIDQADVTNMQKMMVRRCRSVGKPVIVATQMLESMQVNP RPTRAEVSDVTNAVYDGADCVMLSGESAQGKYPIESIATMRTIIDAAETW IDRNPVHQGKLILRNIEKHEALTNQPVSFYEAAASAAVQAAFRLKAKVII VHTKDGSLAKTVAKYSPFVPCMCFTNSQKVAKQLIIHRGLHPIVIPDGHL WNTNKDVVLDHVKRLGFAGQGDRVVVLTGELQHEGSTSTSGTYYMDVK* back to topmRNA from alignment at chr3:1500032..1503699+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO03G05260.2 ID=NO03G05260.2|Name=NO03G05260.2|organism=Nannochloropsis oceanica|type=mRNA|length=3668bp|location=Sequence derived from alignment at chr3:1500032..1503699+ (Nannochloropsis oceanica) ACCACAGGAAGTAACAACTCGCGTGAATTGTTTCGTCTTGTCCGCTTCCT
CCTTCCCCCACCGCCCACCACCAGCCTAAACTCAAGCAAAATTATGCTCG
TTCTACGTCGGACCGCCAGCCGCCGCTGCCTGCTCCAGAGCAGCAGCACT
CGTCTCCTTGCCCCATCCCCCGTGGCCGTGTCGCAGCGGCAAAAGGTGGA
TTATATTCCTTCCTTTATCGAGTCCCGCAAGAGCCTGACGAAAATCATCG
CCACCATTGGTCCCGCCTCGGAGCAATTTCCCGAGCTGCAGGCTTGCGTC
AAGAGCGGGTAAGGCCGACGGCACGTGCCTTGCTTGCTTTGGTGGACGAT
TGAGATGAATATATGTATATATATATATATATACTCAGCGAGCGAGTTTG
TCGCACCTTTTTCACCCACCGCTCCCTCTCCGCGCACATACCAACAGCAT
GCGAATCATGCGGCTCAACTTCTCACATGCCACGTACGAAGAGGCCACGC
TTCGGATCAACAATCTTCGTAAGTCCCACGGCGTGCACTCGGCAGCCATG
GGCTCCACGTTCAATTTGCGAGGTACATCCACATGGGGGGAGGGAGGAAA
GACGGTTCAAAGCGGGAAGAGGCTGAACTCAGAAACGATATGTCGAGCGA
CTGAAATACATAAAAGAGTGCGAATTGATCACCCTCGTATCATCCTCGTT
TTTGGCCTCATATCGTTCCTTCTGGTCTCTTTTTCCGTGATTTAGCCGTC
CTACTGGATATCCAAGGCCCCAAAATTCGGACAGGTTCCTTCAAGGAAGG
GAGCATCATGCTAGAGCAAGGCAAGGAGTACATCTTGACCACGGACGAGA
GCGTGAAATTAACGGGGGACGAGAAACAGTTCTATGTGGATTATGAGGTG
AAAAAGAAGGGAGGGAAGGAGGGAGGGACAGTAGGAAACGGTAAGACGTT
ACCGTGCATTTGCCAGATTTCCTTCGCACAAACATCTTCTCTCACTCTTT
CTCCTTCCCTCCTTCCCTCCCTCCCTTCGCAGCCCCTGTATGGATCTACC
AAAAAGGGCGACCCCGTGCTGATCGATGACGGTAACGTCGTCTTGGAGGT
CACCGGGCATGTGGGGGACGGCCATGGCGTCATTTGCAAGGCCCTCAACT
CCGGAAAGATCAAAAACAGACGAGGCGTTAATGTGCCGAACAGCAAGGTA
GGTGTGTCGACGACAGGGAGGGCAGGAAAGGACGGGCAGCAGCCATGTCG
ATATGCCGAGGATAGGTGGGAAAGGGCAGCTGCAGTCACGAGAAACGCGC
AGTGGCCCATTACGGGCTGCATGTCTTGAAACGTGACGCTTTCCTCCCTC
CTTCCCTCCCTCCCTAACCCCCTCTCTCCCACCCTTCCTCGATCCCCCAC
TTCCCCAGGTGGACCTGCCCGCTCTGACCGTCAAAGACCAAGCCGACCTT
TCCTTCGGCGTCCAAAATGACATCGATTTTGTCGCCGCCTCCTTCGTCCG
CAAGGCCCAAGACATTCATGATATCCGGGCGTATCTTGCCCAGGAGATGT
CGAAGCACTGGCCTGCGACGCACTTGCCCCCTAAGATCATTGCCAAGATC
GAATCGACGGAAGCGATTCAGAATTATGAGGAGATCATGGAAGCTGCCGA
TGGCATCATGGTGGCTCGTGGGGATTTGGGGGTACGTCAGGGAGGGGAGG
AGGGAGAGAGGGAGCGGGAGAACGAGGATTGCACTGAGTAGGTGAAGATT
GAGAGGACAAATGCGTCTTGTTATTTCAAATGCGACAATGGAGGTAATGG
ATTTCGGGGTCATGGGAGGATTGCTCATGATGTGTGTGGGAGCGGGAAGG
AGGGTAGGAGGGATGGCAAAAGGGAGAGAAGGAAGGAAGGGAGGCTGGAA
GGGAGACGTTTCGTGGACCCACGAATTCTTCAAGTAAATGGTTTTTATGA
ATGCGCAGATACGCTTACTCAATCTTCCACGCCATTTCCTCATTCTCCTT
CCTTCCTTCCCTCCCTCCCTCCTTGTGTTTTTCGTCCAGGTGGAGATCGA
TCAGGCCGACGTGACCAACATGCAGAAGATGATGGTCCGCCGGTGTCGCA
GCGTGGGGAAGCCTGTCATTGTCGCAACTCAGATGCTTGAGTCGATGCAG
GTTAATCCCCGCCCGACCCGCGCGGAAGTTTCTGATGTCACGGTACGTGC
GTGAAAGGGATGAAGGAAGGAGGGAGGGAGGGGGGGAGAGATGGAGGGAG
GGAGAAGCACGGTTGTTCATGTACTGATGTATGTACATTCTCGGTCATCG
ATCTTTCCCACTCATCCCTTCCATCCAATCTTCGATTTCCCCTCTGCATT
TGATAACAGAACGCTGTCTACGACGGAGCCGACTGTGTGATGCTCTCGGG
TGAAAGCGCCCAAGGAAAGTATCCTATCGAGTCCATCGCGACCATGCGCA
CCATCATCGACGCCGCTGGTACGTACCTGCTTTAAAAAAGGAGGGAGGGA
AGCAGCGATGACGAGTGATTGACCATTGATAGATTGCGCTCATCCTCCAT
CTACCAAATCGTCCGCTTATCTAGTCTCACCTACTGATGACAACCCTCCC
TTCTTCCCTACGCCTACGTCCACGCCCTCCCTCCCTCCCTCCCTCTTTAT
GACAGAAACTTGGATCGATCGTAATCCCGTCCACCAGGGAAAATTAATCT
TACGGAACATCGAAAAGCATGAGGCCCTGACCAACCAGCCCGTGAGCTTT
TATGAGGCGGCGGCCAGCGCGGCGGTCCAGGCGGCGTTTCGATTGAAAGC
TAAGGTTATTATTGTGCATACAAAGGACGGGTCATTGGCCAAGACCGTGG
CAAAGTGTACGTGACGGAGGTGATGGGGAAGGGGAGAGGGGGGAAAAGGG
AAAGAGAAACAGAGACAGAGATACCGAAACACAGGCAGGGAGAGATAAGG
AGATGGACAGACAGAGGAAGATATATATATGTATATATGTCTATATATAG
AGAGAGAGAGGGGGGGGGGGGGGGCGGATGGGGAAAGCACAGTGATTGTG
TGCTTTCCTCCCATAGGTTTTTCCTTCATCTGTGACATGGTTTATGAAGG
CATTTTCTCACTTAACTTCCTATTCTTCCCTGCCTATTCTTCCCTGCCTT
TTCTTCCCTGCCTTCTCATCCCTGACCCCTTTTGGCAACCTCCCTCTTCA
CCTACAGACTCCCCTTTCGTCCCATGCATGTGTTTCACCAACTCTCAGAA
GGTTGCGAAGCAGCTCATCATCCATCGCGGTCTTCATCCCATCGTCATTC
CGGACGGCCACCTGTGGAATACCAACAAGGACGTTGTACTGGACCATGTG
AAAAGGCTGGGCTTCGCAGGCCAGGGAGACCGCGTTGTTGTGCTGACGGG
TGAACTGCAACACGAGGGATCCACGTCGACAAGCGGGACGTACTATATGG
ATGTTAAATAGAAGGAGGAAATGGCTTATAAAAGTAAAGCGAACGTGAAC
GAAGAAACCAAAGACAAAGACGGGAGGGAGGAGGAGAAACGGAGGAGGCA
GAAAGGAAATTACGGCGATACACGCCTCGAGGAGGTAAAGAGAAATTAAT
ACAGTTTTGAATCGACTGACGCTTGTCAGCGCCTCCAAAAGAAAAATATA
TAAGAAGGCTCATTGATG back to topCoding sequence (CDS) from alignment at chr3:1500032..1503699+ >NO03G05260.2 ID=NO03G05260.2|Name=NO03G05260.2|organism=Nannochloropsis oceanica|type=CDS|length=1647bp|location=Sequence derived from alignment at chr3:1500032..1503699+ (Nannochloropsis oceanica) ATGCTCGTTCTACGTCGGACCGCCAGCCGCCGCTGCCTGCTCCAGAGCAG CAGCACTCGTCTCCTTGCCCCATCCCCCGTGGCCGTGTCGCAGCGGCAAA AGGTGGATTATATTCCTTCCTTTATCGAGTCCCGCAAGAGCCTGACGAAA ATCATCGCCACCATTGGTCCCGCCTCGGAGCAATTTCCCGAGCTGCAGGC TTGCGTCAAGAGCGGCATGCGAATCATGCGGCTCAACTTCTCACATGCCA CGTACGAAGAGGCCACGCTTCGGATCAACAATCTTCGTAAGTCCCACGGC GTGCACTCGGCAGCCATGGGCTCCACGTTCAATTTGCGAGCCGTCCTACT GGATATCCAAGGCCCCAAAATTCGGACAGGTTCCTTCAAGGAAGGGAGCA TCATGCTAGAGCAAGGCAAGGAGTACATCTTGACCACGGACGAGAGCGTG AAATTAACGGGGGACGAGAAACAGTTCTATGTGGATTATGAGCCCCTGTA TGGATCTACCAAAAAGGGCGACCCCGTGCTGATCGATGACGGTAACGTCG TCTTGGAGGTCACCGGGCATGTGGGGGACGGCCATGGCGTCATTTGCAAG GCCCTCAACTCCGGAAAGATCAAAAACAGACGAGGCGTTAATGTGCCGAA CAGCAAGGTGGACCTGCCCGCTCTGACCGTCAAAGACCAAGCCGACCTTT CCTTCGGCGTCCAAAATGACATCGATTTTGTCGCCGCCTCCTTCGTCCGC AAGGCCCAAGACATTCATGATATCCGGGCGTATCTTGCCCAGGAGATGTC GAAGCACTGGCCTGCGACGCACTTGCCCCCTAAGATCATTGCCAAGATCG AATCGACGGAAGCGATTCAGAATTATGAGGAGATCATGGAAGCTGCCGAT GGCATCATGGTGGCTCGTGGGGATTTGGGGGTGGAGATCGATCAGGCCGA CGTGACCAACATGCAGAAGATGATGGTCCGCCGGTGTCGCAGCGTGGGGA AGCCTGTCATTGTCGCAACTCAGATGCTTGAGTCGATGCAGGTTAATCCC CGCCCGACCCGCGCGGAAGTTTCTGATGTCACGAACGCTGTCTACGACGG AGCCGACTGTGTGATGCTCTCGGGTGAAAGCGCCCAAGGAAAGTATCCTA TCGAGTCCATCGCGACCATGCGCACCATCATCGACGCCGCTGAAACTTGG ATCGATCGTAATCCCGTCCACCAGGGAAAATTAATCTTACGGAACATCGA AAAGCATGAGGCCCTGACCAACCAGCCCGTGAGCTTTTATGAGGCGGCGG CCAGCGCGGCGGTCCAGGCGGCGTTTCGATTGAAAGCTAAGGTTATTATT GTGCATACAAAGGACGGGTCATTGGCCAAGACCGTGGCAAAGTACTCCCC TTTCGTCCCATGCATGTGTTTCACCAACTCTCAGAAGGTTGCGAAGCAGC TCATCATCCATCGCGGTCTTCATCCCATCGTCATTCCGGACGGCCACCTG TGGAATACCAACAAGGACGTTGTACTGGACCATGTGAAAAGGCTGGGCTT CGCAGGCCAGGGAGACCGCGTTGTTGTGCTGACGGGTGAACTGCAACACG AGGGATCCACGTCGACAAGCGGGACGTACTATATGGATGTTAAATAG back to top
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