NO03G04630.1, NO03G04630.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G04630.1
Unique Name	NO03G04630.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3700
Alignment location	chr3:1327306..1331306 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:1327306..1331306 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO03G04630.1 vs.
Match: EWM29909.1 (lysine-specific demethylase [Nannochloropsis gaditana])

HSP 1 Score: 947.6 bits (2448), Expect = 2.200e-272
Identity = 487/663 (73.45%), Postives = 560/663 (84.46%), Query Frame = 0

Query:   43 MKNQSEDDDGVSSSSSTSSSSSSSSSSSFSSSSSSSSAATFAVANVASGSSSTATACISGSSAAQVCEKKDGKRNATHTLPHWVGNSFNECGKRTRRPPPRFTES-GLDSKEESILRQAIENSKIETHLCDTVEIADVPTFRPSPAEFADPIQFIESVRGAGEHFGIVKIIPPQGWSPPPE-ALDLSSTLPFKTRLQSLQFFKQGTGFADGKNYSFAEYEAMAHAFAERWKRERYEKQGKEGPRLEDLERDYWRIIETAEEVVDVEYGNDLDTLTYGSGFPRAKDLMMPSGGDGSEEKFATETIGKDKEGRGRVFGTPEYYERCGWNMNNLPLWPGSVLRYIRAPLKGVNVPWLYLGMQFATFCWHNEDNFMYSINYLHKGAPKQWYSIPGSKADLMEKVMKGFLREVFDNNPDLLHHMTNQFHPVLFHRAGVPVFKAHQRPGEFIVTFPKSFHAGFNYGFNVAEAVNFSPPHWLPAGREAIERYRKFARESVVSHDRLVLTLAHNLCPEWSIPSLRALLNDLTLIVKEEEYVRNELSRQGLRVDVVPTDKLLPNNLKEMDDISLDYDEKRACLSCKHVCFLSAVACECSEYKVACLREVALLCDCKMEERYLMAWHSISALWGMVRRVDNYLKARQEEVGKKE-KEAEDEAGVTTTSDGESS 703
            +K + E   GVS+S+++++   S+S+++ +  S ++SA +   +N+ S          +G++ AQ   + + KRN   ++    G +    GKR+RRPPPRF E+ GLD +EESILRQAIENSKIETHLCDTVEI +VP FRPS AEFADPIQFIESV+ AG+HFGIVKIIPP GWSPPP+  +  S   P KTRLQSL++FK+GTG ADGK+Y+FAEYE MA  F+E+W++ERY+ QGK+ P  EDLERDYWRIIE AEEVVDVEYGNDLDTLTYGSGFPRA DLMMP     +E++FA ETIGKD+EGRGR+ GTPEYYERCGWNMNNLPLWPGSVLRYIRAPLKGVNVPWLYLGMQFATFCWHNEDNFM+SINYLH+GA KQWYSIPGSKAD+MEKVMKGFLREVF NNPDLLHHMTNQFHPVLFHRAGVPVFKA Q PGEFIVTFPKSFHAGFNYGFNVAEAVNFSPP WLP GREA+ERYR+FARESVVSHDRLVLTLAHNLCPEWSIPSL+ALL+DLTLIVKEEE+ R++L+RQGLRVD+VP  KLLPNNLKEMDD SLDYDEKR CLSCKHVCFLSAVACECSE KV CLREV LLC C+M++RYLMAWHSIS LW MVRRV+ YLKAR  E+GK++ ++ E+E G +TTSDGE S
Sbjct:   64 VKGKDEGSRGVSTSAASATPVPSASATAATQLSDATSANS-TDSNIVSRRKQEP----AGTTPAQA--RGNNKRNLP-SVSSAGGVARENGGKRSRRPPPRFGETAGLDRREESILRQAIENSKIETHLCDTVEIGEVPVFRPSLAEFADPIQFIESVKQAGDHFGIVKIIPPPGWSPPPQDEMHRSCKTPVKTRLQSLKYFKEGTGVADGKDYTFAEYENMAVQFSEKWQKERYQGQGKDAPTHEDLERDYWRIIEAAEEVVDVEYGNDLDTLTYGSGFPRATDLMMPRSEGSTEDRFAIETIGKDREGRGRLLGTPEYYERCGWNMNNLPLWPGSVLRYIRAPLKGVNVPWLYLGMQFATFCWHNEDNFMFSINYLHRGAAKQWYSIPGSKADVMEKVMKGFLREVFANNPDLLHHMTNQFHPVLFHRAGVPVFKARQEPGEFIVTFPKSFHAGFNYGFNVAEAVNFSPPLWLPLGREAMERYRRFARESVVSHDRLVLTLAHNLCPEWSIPSLQALLHDLTLIVKEEEFWRSQLTRQGLRVDIVPPSKLLPNNLKEMDDASLDYDEKRVCLSCKHVCFLSAVACECSESKVVCLREVPLLCKCRMDQRYLMAWHSISDLWDMVRRVEEYLKARLGEMGKRDGQKEEEEGGGSTTSDGEES 718

The following BLAST results are available for this feature:

BLAST of NO03G04630.1 vs.

BLAST of NO03G04630.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29909.1	2.200e-272	73.45	lysine-specific demethylase [Nannochloropsis gadit...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G04630	NO03G04630	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO03G04630.1	NO03G04630.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO03G04630.1.cds1	NO03G04630.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04630.1.cds2	NO03G04630.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:1327306..1331306+
coding sequence from alignment at chr3:1327306..1331306+

mRNA sequence

>NO03G04630.1 ID=NO03G04630.1|Name=NO03G04630.1|organism=Nannochloropsis oceanica|type=mRNA|length=3700bp
TGCTTGGATACTCGCCGGGGGCATGGGGAGCAGGTTTATGGAAAGGTCCC
ATTGTCTTGTGCATGATACGGACTACAACTCGCCCAAGTGCACTTCAAAG
TGTGGTAAAATTTTGCGTGGTCCATGTGAGCGGAGAGGGGCCGAGTCCTG
TGCATGCATTGTGTTTGAGGGACCCTATAACTAATTCTGGCTTTCACACA
AAAACGCGACTCAAACTCACGCGGCTCTTGTGCTTCTTAAACATGGGTTT
GTCCCGCAACTTTTACCTGTACTTGTACATCCACATAATTACTTATTCAT
CGCACGAGAGAATTGAGTGGTCAACAATTTGTTTGGAGTCGTGTGGCAAG
TGTTTTGCTCAAGCAAGTCGAACGGGATTCCAAGCAACAGAAAATAACAA
ATGCGACTTTAGGAACTCTCCCTCTCGTCTCTGGCCACGAGTACCCCGTG
CTCATTAGCCGACCAGATATCCCGCGAGCAGGGTTTCTTCTGTCTTTAAA
GAGAGAAGAATTGTCTCCCGTGTCTGTACTAGCGTCCCTTCTCTTACGGA
CTATCCCTCCTACTCGCCTCACGACAACAGCACCGAAACCCAGCAAAGGA
GCCGACAGTTCAAGCAAGCCAAGTTCTGAGTCAGACTCCTGCTGCTTGTT
TGTGGGTCAATATCGAGAAAGCGGCGTCCATTACATTGGAAATGAAGAGG
GAAGCAGAGAGTCCACCGCTCGAGGATTCTACCTGGAGTGATGAGAGCTC
TAAGGGCGGTGGGACTCGCAGAAAGAGCCTTGTGGGCGCGAACGGAAGAG
TGGGCAAAAAAACGCAAATGAAGAACCAAAGCGAAGACGACGATGGGGTC
TCTTCCTCGTCTTCAACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTTCTCCTCCTCCTCCTCTTCCTCTTCAGCCGCCACTTTTGCTGTTGCAA
ACGTGGCAAGTGGAAGCTCCTCAACCGCCACCGCCTGCATCAGCGGCTCA
TCCGCCGCACAAGTGTGCGAAAAGAAGGACGGTAAACGAAATGCCACTCA
CACCTTGCCTCATTGGGTAGGAAACTCCTTCAACGAATGCGGCAAGAGGA
CTAGGCGGCCGCCGCCTCGTTTTACGGAGTCAGGTTTGGACTCCAAAGAG
GAATCGATTCTTCGCCAGGCGATTGAGAACTCCAAGATCGAGACACACTT
ATGCGATACGGTCGAGATTGCGGATGTACCGACATTTCGCCCGAGCCCCG
CCGAGTTTGCGGATCCCATCCAATTTATCGAGAGTGTCCGCGGTGCCGGT
GAGCACTTTGGCATCGTCAAGATCATCCCTCCCCAGGGGTGGTCTCCTCC
ACCCGAGGCCTTGGACCTCTCGTCCACGCTACCTTTTAAGACAAGGCTGC
AAAGCTTGCAGTTCTTCAAACAAGGGACGGGGTTTGCGGATGGGAAGAAT
TACAGCTTTGCAGAGTACGAGGCCATGGCGCATGCGTTTGCAGAGAGGTG
GAAGAGGGAGAGGTATGAGAAGCAAGGGAAGGAGGGGCCGCGCCTCGAGG
ATCTTGAGCGGGACTACTGGAGGATCATTGAGACGGCGGAGGAGGTGGTG
GACGTGGAATACGGGAATGACTTGGACACGTTGACGTACGGGAGTGGGTT
TCCACGGGCGAAGGATTTGATGATGCCTTCAGGAGGAGACGGATCGGAAG
AGAAGTTTGCAACCGAGACGATTGGAAAGGATAAGGAGGGGAGAGGGCGG
GTGTTTGGCACGCCCGAGTACTATGAGCGGTGCGGATGGAATATGAACAA
CCTCCCCCTCTGGCCTGGATCCGTTTTGAGGTACATTCGCGCTCCGCTGA
AGGGGGTGAATGTCCCGTGGCTGTACCTGGGAATGCAGTTTGCGACTTTT
TGTTGGCACAATGAGGACAACTTTATGTATTCGATTAATTACCTCCACAA
AGGGGCGCCCAAGCAGTGGTACTCCATTCCCGGGTCCAAGGCAGACTTGA
TGGAGAAGGTTATGAAGGGATTTTTGCGCGAGGTCTTTGATAACAATCCG
GATTTGCTCCACCACATGACCAACCAGTTTCATCCCGTCCTCTTCCACCG
TGCCGGGGTCCCTGTCTTCAAAGCCCACCAGCGACCTGGCGAGTTTATTG
TCACCTTTCCCAAGTCATTTCATGCCGGGTTTAATTACGGGTTCAACGTC
GCGGAAGCTGTCAACTTCTCTCCCCCTCACTGGTTGCCGGCCGGGAGGGA
GGCCATTGAGAGGTACCGGAAATTTGCCCGTGAATCGGTCGTCTCCCACG
ATCGGCTGGTTCTTACCCTGGCGCATAACTTGTGTCCGGAGTGGTCAATC
CCGTCTTTAAGGGCGTTGTTGAACGACCTGACGTTGATCGTGAAGGAGGA
AGAGTATGTGAGGAATGAGCTCAGCCGTCAGGGGTTGAGGGTGGATGTGG
TGCCGACGGATAAGTTGCTACCGAACAATTTGAAGGAGATGGATGATATC
TCCCTGGACTACGATGAGAAGCGCGCGTGCTTGAGTTGCAAGCATGTGTG
TTTCCTGTCGGCCGTGGCATGCGAGTGCAGTGAGTACAAGGTGGCGTGCT
TGAGAGAAGTGGCATTGCTGTGCGATTGCAAGATGGAAGAACGTTATCTG
ATGGCGTGGCATAGCATCAGTGCCTTGTGGGGAATGGTCCGCCGCGTGGA
CAATTACTTGAAAGCTCGGCAGGAAGAAGTAGGCAAGAAGGAAAAGGAGG
CAGAAGACGAAGCGGGCGTCACCACCACGAGCGATGGAGAGTCGTCAAAT
GGTGCGCCTTGAGCGGTGGGGACAAAAAGAAAAGAGTGTAAATACAAAAT
AACTCGCAGAAAGGAATCATCTGTAGGTGTGTATGAGAATTGATTGCGTG
TCCTGTGTACGTATCTTTGTGTTCCTATGTATTTGCCTAGGAGAGAGAGA
GGGAATGACGGCCTTCATGCCTCGTCATCCTCAGCCAGCCGTAATCCCTG
ACACTACCAACAAGACAATGGTTGAAAAAGAAAGAAGAATAAGACACATC
GATCATCACTCAATGTGCAGCTTTTTGTTTTGCGATTCTTCACCCCCTCC
CTATTTATTTCTTACGTCCTAGCTAGCTTAGTCGTCCTTCTTGTTGCCTG
GGGCAGTCTCCAAATTCCCTGTAGTCGAGCTGCGTGTCCTGCTCTTGCTT
CCGACCGGCGTCGTGGGCCAGACCAGCCCCGCGCATTCCACCTCACTTTT
GGTGGCCAGCCGGCCGGTGGGCTTGTGCCTCCACTCCCCGTTCTGGTAAT
TGAGGCTGTCGAGTCCCGGAGGTATGCCGTAGGTCTTTTCGTAGTCGGCC
TGGGAGATGGGTTTGCTCTTGATTGCCAGCTCCACAAAAGCCAGGAGGAT
TGAGGCCAAGAAAAACAGGACACAAAATGTTGGGAAATCGATCTCCATGG
TCGTGTATAGCTTGTTGTGTGTATGTGGGGCGTGGGGTGCGCGCGCAGGG
GGGAAGGGGAGAAGCAAGCGAGGAACAAATGTTGAAGGCGACTGTTAACC
TGATTTATGTAGTTTTTAAGTGGAGATGGCTCTGGGTTTAGTATGGCGGG
ACTATAGGCGTCAGAATGTGATTAGAAGAAAGGCTATGTCGGGTCGTTAA
TATACGTGTGGCACTTGCCCGCGGGGCACAAAGACATACACAAAAAATAC

protein sequence of NO03G04630.1

>NO03G04630.1-protein ID=NO03G04630.1-protein|Name=NO03G04630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=707bp
MKREAESPPLEDSTWSDESSKGGGTRRKSLVGANGRVGKKTQMKNQSEDD
DGVSSSSSTSSSSSSSSSSSFSSSSSSSSAATFAVANVASGSSSTATACI
SGSSAAQVCEKKDGKRNATHTLPHWVGNSFNECGKRTRRPPPRFTESGLD
SKEESILRQAIENSKIETHLCDTVEIADVPTFRPSPAEFADPIQFIESVR
GAGEHFGIVKIIPPQGWSPPPEALDLSSTLPFKTRLQSLQFFKQGTGFAD
GKNYSFAEYEAMAHAFAERWKRERYEKQGKEGPRLEDLERDYWRIIETAE
EVVDVEYGNDLDTLTYGSGFPRAKDLMMPSGGDGSEEKFATETIGKDKEG
RGRVFGTPEYYERCGWNMNNLPLWPGSVLRYIRAPLKGVNVPWLYLGMQF
ATFCWHNEDNFMYSINYLHKGAPKQWYSIPGSKADLMEKVMKGFLREVFD
NNPDLLHHMTNQFHPVLFHRAGVPVFKAHQRPGEFIVTFPKSFHAGFNYG
FNVAEAVNFSPPHWLPAGREAIERYRKFARESVVSHDRLVLTLAHNLCPE
WSIPSLRALLNDLTLIVKEEEYVRNELSRQGLRVDVVPTDKLLPNNLKEM
DDISLDYDEKRACLSCKHVCFLSAVACECSEYKVACLREVALLCDCKMEE
RYLMAWHSISALWGMVRRVDNYLKARQEEVGKKEKEAEDEAGVTTTSDGE
SSNGAP*

mRNA from alignment at chr3:1327306..1331306+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO03G04630.1 ID=NO03G04630.1|Name=NO03G04630.1|organism=Nannochloropsis oceanica|type=mRNA|length=4001bp|location=Sequence derived from alignment at chr3:1327306..1331306+ (Nannochloropsis oceanica)
TGCTTGGATACTCGCCGGGGGCATGGGGAGCAGGTTTATGGAAAGGTCCC
ATTGTCTTGTGCATGATACGGACTACAACTCGCCCAAGTGCACTTCAAAG
TGTGGTAAAATTTTGCGTGGTCCATGTGAGCGGAGAGGGGCCGAGTCCTG
TGCATGCATTGTGTTTGAGGGACCCTATAACTAATTCTGGCTTTCACACA
AAAACGCGACTCAAACTCACGCGGCTCTTGTGCTTCTTAAACATGGGTTT
GTCCCGCAACTTTTACCTGTACTTGTACATCCACATAATTACTTATTCAT
CGCACGAGAGAATTGAGTGGTCAACAATTTGTTTGGAGTCGTGTGGCAAG
TGTTTTGCTCAAGCAAGTCGAACGGGATTCCAAGCAACAGAAAATAACAA
ATGCGACTTTAGGAACTCTCCCTCTCGTCTCTGGCCACGAGTACCCCGTG
CTCATTAGCCGACCAGATATCCCGCGAGCAGGGTTTCTTCTGTCTTTAAA
GAGAGAAGAATTGTCTCCCGTGTCTGTACTAGCGTCCCTTCTCTTACGGA
CTATCCCTCCTACTCGCCTCACGACAACAGCACCGAAACCCAGCAAAGGA
GCCGACAGTTCAAGCAAGCCAAGTTCTGAGTCAGACTCCTGCTGCTTGTT
TGTGGGTCAATATCGAGAAAGCGGCGTCCATTACATTGGAAATGAAGAGG
GAAGCAGAGAGTCCACCGCTCGAGGATTCTACCTGGAGTGATGAGAGCTC
TAAGGGCGGTGGGACTCGCAGAAAGAGCCTTGTGGGCGCGAACGGAAGAG
TGGGCAAAAAAACGCAAATGAAGAACCAAAGCGAAGACGACGATGGGGTC
TCTTCCTCGTCTTCAACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTTCTCCTCCTCCTCCTCTTCCTCTTCAGCCGCCACTTTTGCTGTTGCAA
ACGTGGCAAGTGGAAGCTCCTCAACCGCCACCGCCTGCATCAGCGGCTCA
TCCGCCGCACAAGTGTGCGAAAAGAAGGACGGTAAACGAAATGCCACTCA
CACCTTGCCTCATTGGGTAGGAAACTCCTTCAACGAATGCGGCAAGAGGA
CTAGGCGGCCGCCGCCTCGTTTTACGGAGTCAGGTTTGGACTCCAAAGAG
GAATCGATTCTTCGCCAGGCGATTGAGAACTCCAAGATCGAGACACACTT
ATGCGATACGGTCGAGATTGCGGATGTACCGACATTTCGGTAAGTCAATT
TGAGTCATGGTGGCTGAGGTAGAGCGGGGGCGGGAGGGATGAGAAGAGAG
GGCGGGGAGACGAAAAGGCGATGAGCTATATTCGCCGCCTGTATATAAGC
GCGCTGTTTTCATGCCTTTCTACGAGGCAAGGTAAGACATGTTAATGCCA
TTTGTTCACTCTTTTCTACTTTCCTCACCGTGTGCCATTTTCCCTTCTCT
TTATCGAGCCCACGTCCGCGAGACCTTCAAGAATTGATTTAGACCTAACG
CTTGCTCCCTCCTTCTCTCCTCCCTTCCCTTTTTCCCTAGCCCGAGCCCC
GCCGAGTTTGCGGATCCCATCCAATTTATCGAGAGTGTCCGCGGTGCCGG
TGAGCACTTTGGCATCGTCAAGATCATCCCTCCCCAGGGGTGGTCTCCTC
CACCCGAGGCCTTGGACCTCTCGTCCACGCTACCTTTTAAGACAAGGCTG
CAAAGCTTGCAGTTCTTCAAACAAGGGACGGGGTTTGCGGATGGGAAGAA
TTACAGCTTTGCAGAGTACGAGGCCATGGCGCATGCGTTTGCAGAGAGGT
GGAAGAGGGAGAGGTATGAGAAGCAAGGGAAGGAGGGGCCGCGCCTCGAG
GATCTTGAGCGGGACTACTGGAGGATCATTGAGACGGCGGAGGAGGTGGT
GGACGTGGAATACGGGAATGACTTGGACACGTTGACGTACGGGAGTGGGT
TTCCACGGGCGAAGGATTTGATGATGCCTTCAGGAGGAGACGGATCGGAA
GAGAAGTTTGCAACCGAGACGATTGGAAAGGATAAGGAGGGGAGAGGGCG
GGTGTTTGGCACGCCCGAGTACTATGAGCGGTGCGGATGGAATATGAACA
ACCTCCCCCTCTGGCCTGGATCCGTTTTGAGGTACATTCGCGCTCCGCTG
AAGGGGGTGAATGTCCCGTGGCTGTACCTGGGAATGCAGTTTGCGACTTT
TTGTTGGCACAATGAGGACAACTTTATGTATTCGATTAATTACCTCCACA
AAGGGGCGCCCAAGCAGTGGTACTCCATTCCCGGGTCCAAGGCAGACTTG
ATGGAGAAGGTTATGAAGGGATTTTTGCGCGAGGTCTTTGATAACAATCC
GGATTTGCTCCACCACATGACCAACCAGTTTCATCCCGTCCTCTTCCACC
GTGCCGGGGTCCCTGTCTTCAAAGCCCACCAGCGACCTGGCGAGTTTATT
GTCACCTTTCCCAAGTCATTTCATGCCGGGTTTAATTACGGGTTCAACGT
CGCGGAAGCTGTCAACTTCTCTCCCCCTCACTGGTTGCCGGCCGGGAGGG
AGGCCATTGAGAGGTACCGGAAATTTGCCCGTGAATCGGTCGTCTCCCAC
GATCGGCTGGTTCTTACCCTGGCGCATAACTTGTGTCCGGAGTGGTCAAT
CCCGTCTTTAAGGGCGTTGTTGAACGACCTGACGTTGATCGTGAAGGAGG
AAGAGTATGTGAGGAATGAGCTCAGCCGTCAGGGGTTGAGGGTGGATGTG
GTGCCGACGGATAAGTTGCTACCGAACAATTTGAAGGAGATGGATGATAT
CTCCCTGGACTACGATGAGAAGCGCGCGTGCTTGAGTTGCAAGCATGTGT
GTTTCCTGTCGGCCGTGGCATGCGAGTGCAGTGAGTACAAGGTGGCGTGC
TTGAGAGAAGTGGCATTGCTGTGCGATTGCAAGATGGAAGAACGTTATCT
GATGGCGTGGCATAGCATCAGTGCCTTGTGGGGAATGGTCCGCCGCGTGG
ACAATTACTTGAAAGCTCGGCAGGAAGAAGTAGGCAAGAAGGAAAAGGAG
GCAGAAGACGAAGCGGGCGTCACCACCACGAGCGATGGAGAGTCGTCAAA
TGGTGCGCCTTGAGCGGTGGGGACAAAAAGAAAAGAGTGTAAATACAAAA
TAACTCGCAGAAAGGAATCATCTGTAGGTGTGTATGAGAATTGATTGCGT
GTCCTGTGTACGTATCTTTGTGTTCCTATGTATTTGCCTAGGAGAGAGAG
AGGGAATGACGGCCTTCATGCCTCGTCATCCTCAGCCAGCCGTAATCCCT
GACACTACCAACAAGACAATGGTTGAAAAAGAAAGAAGAATAAGACACAT
CGATCATCACTCAATGTGCAGCTTTTTGTTTTGCGATTCTTCACCCCCTC
CCTATTTATTTCTTACGTCCTAGCTAGCTTAGTCGTCCTTCTTGTTGCCT
GGGGCAGTCTCCAAATTCCCTGTAGTCGAGCTGCGTGTCCTGCTCTTGCT
TCCGACCGGCGTCGTGGGCCAGACCAGCCCCGCGCATTCCACCTCACTTT
TGGTGGCCAGCCGGCCGGTGGGCTTGTGCCTCCACTCCCCGTTCTGGTAA
TTGAGGCTGTCGAGTCCCGGAGGTATGCCGTAGGTCTTTTCGTAGTCGGC
CTGGGAGATGGGTTTGCTCTTGATTGCCAGCTCCACAAAAGCCAGGAGGA
TTGAGGCCAAGAAAAACAGGACACAAAATGTTGGGAAATCGATCTCCATG
GTCGTGTATAGCTTGTTGTGTGTATGTGGGGCGTGGGGTGCGCGCGCAGG
GGGGAAGGGGAGAAGCAAGCGAGGAACAAATGTTGAAGGCGACTGTTAAC
CTGATTTATGTAGTTTTTAAGTGGAGATGGCTCTGGGTTTAGTATGGCGG
GACTATAGGCGTCAGAATGTGATTAGAAGAAAGGCTATGTCGGGTCGTTA
ATATACGTGTGGCACTTGCCCGCGGGGCACAAAGACATACACAAAAAATA
C

Coding sequence (CDS) from alignment at chr3:1327306..1331306+

>NO03G04630.1 ID=NO03G04630.1|Name=NO03G04630.1|organism=Nannochloropsis oceanica|type=CDS|length=2121bp|location=Sequence derived from alignment at chr3:1327306..1331306+ (Nannochloropsis oceanica)
ATGAAGAGGGAAGCAGAGAGTCCACCGCTCGAGGATTCTACCTGGAGTGA
TGAGAGCTCTAAGGGCGGTGGGACTCGCAGAAAGAGCCTTGTGGGCGCGA
ACGGAAGAGTGGGCAAAAAAACGCAAATGAAGAACCAAAGCGAAGACGAC
GATGGGGTCTCTTCCTCGTCTTCAACCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTTCTCCTCCTCCTCCTCTTCCTCTTCAGCCGCCACTTTTG
CTGTTGCAAACGTGGCAAGTGGAAGCTCCTCAACCGCCACCGCCTGCATC
AGCGGCTCATCCGCCGCACAAGTGTGCGAAAAGAAGGACGGTAAACGAAA
TGCCACTCACACCTTGCCTCATTGGGTAGGAAACTCCTTCAACGAATGCG
GCAAGAGGACTAGGCGGCCGCCGCCTCGTTTTACGGAGTCAGGTTTGGAC
TCCAAAGAGGAATCGATTCTTCGCCAGGCGATTGAGAACTCCAAGATCGA
GACACACTTATGCGATACGGTCGAGATTGCGGATGTACCGACATTTCGCC
CGAGCCCCGCCGAGTTTGCGGATCCCATCCAATTTATCGAGAGTGTCCGC
GGTGCCGGTGAGCACTTTGGCATCGTCAAGATCATCCCTCCCCAGGGGTG
GTCTCCTCCACCCGAGGCCTTGGACCTCTCGTCCACGCTACCTTTTAAGA
CAAGGCTGCAAAGCTTGCAGTTCTTCAAACAAGGGACGGGGTTTGCGGAT
GGGAAGAATTACAGCTTTGCAGAGTACGAGGCCATGGCGCATGCGTTTGC
AGAGAGGTGGAAGAGGGAGAGGTATGAGAAGCAAGGGAAGGAGGGGCCGC
GCCTCGAGGATCTTGAGCGGGACTACTGGAGGATCATTGAGACGGCGGAG
GAGGTGGTGGACGTGGAATACGGGAATGACTTGGACACGTTGACGTACGG
GAGTGGGTTTCCACGGGCGAAGGATTTGATGATGCCTTCAGGAGGAGACG
GATCGGAAGAGAAGTTTGCAACCGAGACGATTGGAAAGGATAAGGAGGGG
AGAGGGCGGGTGTTTGGCACGCCCGAGTACTATGAGCGGTGCGGATGGAA
TATGAACAACCTCCCCCTCTGGCCTGGATCCGTTTTGAGGTACATTCGCG
CTCCGCTGAAGGGGGTGAATGTCCCGTGGCTGTACCTGGGAATGCAGTTT
GCGACTTTTTGTTGGCACAATGAGGACAACTTTATGTATTCGATTAATTA
CCTCCACAAAGGGGCGCCCAAGCAGTGGTACTCCATTCCCGGGTCCAAGG
CAGACTTGATGGAGAAGGTTATGAAGGGATTTTTGCGCGAGGTCTTTGAT
AACAATCCGGATTTGCTCCACCACATGACCAACCAGTTTCATCCCGTCCT
CTTCCACCGTGCCGGGGTCCCTGTCTTCAAAGCCCACCAGCGACCTGGCG
AGTTTATTGTCACCTTTCCCAAGTCATTTCATGCCGGGTTTAATTACGGG
TTCAACGTCGCGGAAGCTGTCAACTTCTCTCCCCCTCACTGGTTGCCGGC
CGGGAGGGAGGCCATTGAGAGGTACCGGAAATTTGCCCGTGAATCGGTCG
TCTCCCACGATCGGCTGGTTCTTACCCTGGCGCATAACTTGTGTCCGGAG
TGGTCAATCCCGTCTTTAAGGGCGTTGTTGAACGACCTGACGTTGATCGT
GAAGGAGGAAGAGTATGTGAGGAATGAGCTCAGCCGTCAGGGGTTGAGGG
TGGATGTGGTGCCGACGGATAAGTTGCTACCGAACAATTTGAAGGAGATG
GATGATATCTCCCTGGACTACGATGAGAAGCGCGCGTGCTTGAGTTGCAA
GCATGTGTGTTTCCTGTCGGCCGTGGCATGCGAGTGCAGTGAGTACAAGG
TGGCGTGCTTGAGAGAAGTGGCATTGCTGTGCGATTGCAAGATGGAAGAA
CGTTATCTGATGGCGTGGCATAGCATCAGTGCCTTGTGGGGAATGGTCCG
CCGCGTGGACAATTACTTGAAAGCTCGGCAGGAAGAAGTAGGCAAGAAGG
AAAAGGAGGCAGAAGACGAAGCGGGCGTCACCACCACGAGCGATGGAGAG
TCGTCAAATGGTGCGCCTTGA

Synonyms

Publications