NO03G04530.1, NO03G04530.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G04530.1
Unique Name	NO03G04530.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3810
Alignment location	chr3:1300278..1304623 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:1300278..1304623 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO03G04530.1 vs.
Match: EWM29929.1 (fatty-acid- ligase fadd9 [Nannochloropsis gaditana])

HSP 1 Score: 1676.4 bits (4340), Expect = 0.000e+0
Identity = 861/1296 (66.44%), Postives = 1013/1296 (78.16%), Query Frame = 0

Query:   10 WTMPGPNLARLATLLPHDPELQAYQPSPSVQSLVDAAPTTIEIIQQLCQGYAERVALKWCSDGAMTSDYTYTMTYKEVWEKVQTMATVLSTKGWLCKKEFVAVCGFASPGWVLVDILSLYLGAVLVPLPLNVPYEDLKYMLDESGARVVFVSAEESESLAGNVLGKEGACPSVEMVVVMDYGGEEKGQAWVAKLRSLLPASVVRVLTMQELL-------LEHDKKSSSSSNSSSSTFVSPAIPGAEGWGEEPNPLLGLMYTSGSTGRPKGAMYTETLMRALWHTGFSWGAGEIPVVSLGFLPLNHIVGRVTIYQSFTKGGVVYFVRRSDMSTLFEDFARAKPTKTMMVPRIANMAYETYQLKKAELLQAAGLSPTSSCSSPYSSSQQQLLDRVERAARAYIRDKIFGGRLLFAIVGTAPSSAAVSNLIQEACEMPMVEGYGSTELGGITIENHINDATVLKWKLIDVPELGYTLKDHPFPRGELLVRTTTAIPGYYKHPEATSELIDAEGFYSTGDIMEQRGERILVWIDRRKNVLKLAQGEYVSVSRLEALFSGSADISNIYLYGNSLRSFMLGVVVPSEGLVEMAREGWRSSSGG----GKEKQELA-----------ERIKPLLRQRLDAVAKAAGLAAHEVPRDFIVQLDGFTRENSLLTDSNKLARARLKQAFGPRLEAMYTAVEERKEKRLASLQANPDASITEQVCAALEMTLGLGEEVGLDATFAQLGGDSLSAVRLTEHLKRSCGVEVPVAKLLNPTATMQSLVEYLEAK---GEMKDGGKEDEGGGEEIYERVHGPKQAAPLIFAKDLMVEKFIPAAVLHPPGTGGAMDWAAKAGEGLGEGGKGMKGVLLTGANGFLGRFLLLELLGKLQGENEGNRNSSRSTSVSTTITTIYCIVRARNDAAAKARLWEAVGASLLDPNEERVVALAGDVSQPRLGLNCEEAYVSLTEKVDLVLHAGALVNHNLSYRELFGPNVLGTTNIMQFCLTPPSKPKPLHFISTVAVAMGEGGPGPHVTEVHIGKDWAKERRIGGSAYAEGYGASKWAAEVLLQDLNRETGLPVVAYRCSMILPHTSLSGQINVSDIFTRLIVGMIYTGVAPLSFTDGEGQAPHYDGSSVDFVAGAIVAIALEGGR--------GGGRE---KGCRLFHVVNPHRMKGASLDDIVGWVRSAGYPVEGVAPYQEWFNLFKSKLEALPSDKRAQSPLPVLHQWQTPLPSRKKMEELLVLDATCFRDAVKRVTKRGDVPVLSERYLHTCLYHMSVVGLIGATPVVAEAAVWER 1270
            W MPGPN+ RLATLL HD ELQ   P P VQ+ +D   TTIE++QQ+C+GYAER ALKWC +GA T+DYT  +TY+++W++V+ MATVLS +GWL KK+FVAVCGFASPGWVL+D+L+LYLGAVLVPLPLNVPYEDL+ ML+ES ARVVF +AEE+ +L  NVL K+GACP VE VVVMDYG E  GQA V  LR +LPA+V+RVLT+ ELL       ++  ++  +++ +SS  F+ PA+PG++GW +E NPLLGLMYTSGSTGRPKGAMYTE LMRALWHTGFSWG GE+PV+SLGFLPLNHIVGRVTIYQ+ +KGG VYFVRRSDMSTLFEDFA A+PTKTMMVPRIANMAYETYQLKK ELLQ  GLS +S  +   +  ++  LD VERAAR YIRD++FGGRLLFAIVGTAPSSAAVS LIQEACEMPMVEGYGSTELGGITIEN IN ATV+KWKLIDVPELGYTLKD P PRGELLV TTT IPGYYKHP+AT+ELID EGF+ TGDIMEQRG   LVWIDRRKNVLKLAQGEY+S+SRLEAL++G  D+ NI+LYGNSLRS++L VVVPSE LV  A+ G    +GG    G  + ELA            R+KPLLRQRLD++AK AG+A++EVPRDFIVQL GFTREN L+TDSNKLARARLK+ FGPRLEAMY AVE+RKEKRL  L ++P AS T+ V A LEMTLGLGEEVGLDATFAQLGGDSLSAVR+TEHLKR CGV VPVA+LLNP  T+ SL+++L+ K   G++      +E G EEIY RVHG      +IFA+DL + KFIP AVLHPP    A DWAA A +G  +    ++GVLLTGANGFLGRFLLLELL KL  + +     +           +YC++R R++AAAK RLWEAVGASLL  +E+R+V LAGDVS+P LGL+  + Y +L E VDLVLHAGALVNHNLSYR LFGPNV+GT NI++FCL  PS PKPLH++ST+AV MGEGGPG  V E H+G  W  +R +    YAEGYGASKWAAEVLLQ++++ETGLPVVAYRCSMILPH+SL GQINV+D+FTRL+ G+IYTGVAP SFTDG G AP YDGS VDFVAGAIVAI  +G            G+E    GCRLFHV+NPH  KG SLDD++ WV+SAGY VE + PY+ W   F+SKL+ALPS+KR QSPLPVL  WQ P PSR   +E+ V+DA+ FR AVK +T+ GDVP L E YL TCLY MS VGLI ATP V  A + E+
Sbjct:   22 WKMPGPNMDRLATLLAHDRELQDAMPDPQVQARIDKTATTIELVQQVCEGYAEREALKWCVNGAPTADYTECLTYRDIWKRVRAMATVLSGRGWLLKKDFVAVCGFASPGWVLIDVLALYLGAVLVPLPLNVPYEDLRSMLEESEARVVFCAAEEAHTLVMNVLAKDGACPGVETVVVMDYGEESNGQAMVQALRPVLPATVLRVLTLGELLTDVSQGIVDSTERYGTTAAASSCGFLPPAVPGSQGWSDESNPLLGLMYTSGSTGRPKGAMYTEKLMRALWHTGFSWGKGEVPVISLGFLPLNHIVGRVTIYQALSKGGRVYFVRRSDMSTLFEDFATARPTKTMMVPRIANMAYETYQLKKMELLQTVGLSSSSLPTEEQAQGKRLKLDEVERAAREYIRDRVFGGRLLFAIVGTAPSSAAVSALIQEACEMPMVEGYGSTELGGITIENRINVATVVKWKLIDVPELGYTLKDQPCPRGELLVMTTTGIPGYYKHPKATAELIDTEGFFHTGDIMEQRGPEELVWIDRRKNVLKLAQGEYLSISRLEALYAGDPDVKNIFLYGNSLRSYVLAVVVPSEALVAAAKAGLEDGNGGNGLKGSARDELAGQGEVEEEAVLARLKPLLRQRLDSMAKEAGMASYEVPRDFIVQLAGFTRENKLVTDSNKLARARLKETFGPRLEAMYDAVEQRKEKRLEHLHSDPQASTTDMVRAVLEMTLGLGEEVGLDATFAQLGGDSLSAVRVTEHLKRLCGVGVPVAELLNPAMTLSSLIQHLDLKLKRGQVVGAEDMEETGEEEIYRRVHGLGDDDAVIFAQDLTIGKFIPTAVLHPPEAKVATDWAAGAEKGFEKREGRVRGVLLTGANGFLGRFLLLELLQKLCAQTDYKLGGT---------GRVYCLIRGRDEAAAKCRLWEAVGASLLQAHEDRIVVLAGDVSRPHLGLS-GDTYANLLENVDLVLHAGALVNHNLSYRSLFGPNVVGTANIIKFCLARPSHPKPLHYVSTIAVTMGEGGPGREVHEGHLGYCWGNQRFVRKGTYAEGYGASKWAAEVLLQNVHKETGLPVVAYRCSMILPHSSLPGQINVADVFTRLLAGVIYTGVAPASFTDGHGPAPAYDGSPVDFVAGAIVAIVWKGFHRSTGQVDVDAGQEIEASGCRLFHVINPHVQKGPSLDDMIDWVQSAGYDVERITPYRTWLETFESKLQALPSEKRNQSPLPVLKHWQDPSPSRIHAQEISVVDASRFRAAVKELTRWGDVPCLCEGYLLTCLYQMSKVGLISATPAVMLAKLAEK 1307

The following BLAST results are available for this feature:

BLAST of NO03G04530.1 vs.

BLAST of NO03G04530.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29929.1	0.000e+0	66.44	fatty-acid- ligase fadd9 [Nannochloropsis gaditana...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G04530	NO03G04530	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO03G04530.1	NO03G04530.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO03G04530.1.cds1	NO03G04530.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04530.1.cds2	NO03G04530.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04530.1.cds3	NO03G04530.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04530.1.cds4	NO03G04530.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04530.1.cds5	NO03G04530.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:1300278..1304623-
coding sequence from alignment at chr3:1300278..1304623-

mRNA sequence

>NO03G04530.1 ID=NO03G04530.1|Name=NO03G04530.1|organism=Nannochloropsis oceanica|type=mRNA|length=3810bp
ATGGCATCCTCCGCTTCCACTATCGAATGGACCATGCCAGGACCAAATCT
TGCCCGTCTTGCTACCCTTCTCCCGCATGATCCGGAATTGCAAGCCTACC
AACCGAGTCCATCAGTTCAATCCCTCGTCGACGCCGCGCCCACCACCATC
GAAATCATTCAGCAACTATGCCAAGGGTACGCAGAACGCGTAGCATTAAA
ATGGTGTTCGGACGGAGCAATGACTTCTGACTACACATATACTATGACCT
ATAAAGAAGTATGGGAAAAAGTGCAGACAATGGCAACGGTCTTGAGCACC
AAGGGGTGGCTGTGCAAGAAGGAGTTTGTAGCCGTATGTGGGTTTGCGAG
CCCCGGGTGGGTACTTGTGGACATCCTGAGCTTGTACCTTGGAGCAGTTC
TTGTGCCTTTACCGCTGAATGTCCCTTATGAAGACTTAAAATATATGTTG
GATGAATCAGGGGCGAGGGTCGTCTTCGTCTCTGCGGAGGAGAGCGAGAG
CCTGGCAGGTAACGTGCTTGGGAAGGAGGGGGCATGTCCGTCAGTCGAGA
TGGTGGTGGTGATGGATTATGGGGGTGAGGAGAAAGGACAGGCGTGGGTG
GCGAAGCTGCGGTCTCTGCTGCCAGCGAGTGTGGTGCGGGTCCTGACGAT
GCAGGAGTTGTTGCTGGAGCACGACAAGAAGAGCAGTAGCAGTAGCAATA
GCAGCAGCAGTACCTTTGTGTCGCCGGCGATTCCGGGGGCGGAGGGGTGG
GGGGAGGAGCCGAATCCTTTGCTGGGGTTGATGTATACCTCGGGGAGCAC
CGGACGGCCGAAAGGGGCTATGTACACGGAGACGTTGATGCGGGCTTTGT
GGCACACGGGCTTTTCGTGGGGGGCGGGGGAGATCCCGGTAGTGAGCTTG
GGGTTTCTACCGTTGAATCATATCGTTGGAAGAGTTACGATTTACCAGAG
CTTCACCAAGGGCGGCGTGGTTTACTTTGTAAGGCGTTCCGACATGTCGA
CGTTATTCGAAGACTTCGCTCGGGCCAAGCCGACCAAGACAATGATGGTG
CCCCGCATTGCCAATATGGCATACGAAACCTATCAACTCAAGAAAGCCGA
ACTACTACAAGCCGCCGGCCTCTCCCCCACCTCTTCTTGCTCCTCCCCGT
ACTCCTCTTCACAACAGCAGCTGCTCGATAGAGTTGAACGCGCTGCTCGT
GCGTACATCCGCGACAAGATATTCGGAGGCCGTCTCCTCTTTGCGATAGT
CGGGACGGCTCCTTCGTCTGCGGCGGTGTCGAACTTGATCCAAGAGGCGT
GTGAGATGCCCATGGTGGAAGGATACGGGTCTACAGAGCTCGGCGGCATC
ACTATCGAGAACCACATCAACGACGCCACGGTCCTCAAATGGAAACTCAT
TGACGTACCCGAGCTAGGCTACACGCTTAAAGACCATCCCTTTCCTAGGG
GGGAGCTCCTCGTCCGAACCACCACAGCCATCCCCGGGTACTACAAACAC
CCGGAGGCCACAAGTGAGTTAATTGATGCAGAAGGTTTTTATTCCACGGG
GGACATCATGGAGCAGAGAGGGGAGAGGATACTGGTATGGATCGATCGGA
GGAAGAATGTGTTGAAATTGGCGCAAGGGGAGTATGTGAGTGTAAGTCGA
TTGGAAGCTCTGTTTTCGGGGAGTGCCGATATTTCGAATATTTACTTGTA
CGGGAATAGTCTGAGGAGCTTCATGTTGGGTGTAGTTGTACCCTCGGAGG
GATTGGTGGAGATGGCGAGGGAGGGATGGAGGAGTAGTAGTGGGGGCGGC
AAAGAAAAGCAGGAACTCGCGGAAAGGATTAAGCCGTTGTTGCGGCAACG
GTTGGATGCTGTGGCGAAAGCGGCGGGGTTGGCTGCTCATGAGGTGCCGA
GGGATTTCATCGTGCAACTGGATGGCTTTACACGGGAAAACAGCCTCTTG
ACAGATAGCAATAAACTGGCTCGAGCAAGGCTTAAGCAAGCGTTTGGTCC
AAGGCTCGAGGCTATGTACACGGCAGTGGAAGAACGCAAGGAGAAAAGAC
TTGCGTCCCTTCAGGCCAATCCTGACGCGTCCATCACTGAACAGGTCTGC
GCGGCGTTAGAAATGACCTTGGGATTAGGGGAGGAGGTGGGTTTGGATGC
AACTTTTGCGCAGTTGGGAGGGGATTCGTTGAGTGCCGTGCGATTGACGG
AGCATTTGAAGCGATCGTGTGGGGTAGAGGTGCCCGTTGCCAAGTTGCTC
AATCCAACAGCAACGATGCAGTCTTTAGTAGAGTATTTGGAGGCAAAGGG
GGAAATGAAGGATGGGGGGAAGGAGGATGAAGGAGGGGGAGAGGAGATAT
ATGAACGAGTGCATGGTCCTAAGCAAGCAGCCCCTTTAATTTTTGCCAAG
GACCTGATGGTGGAGAAGTTCATTCCAGCGGCTGTGCTGCATCCACCCGG
TACGGGGGGTGCAATGGATTGGGCCGCGAAGGCAGGGGAGGGCTTGGGGG
AGGGAGGAAAAGGGATGAAGGGTGTATTGCTGACGGGCGCCAACGGCTTC
CTGGGACGGTTTTTGTTGTTGGAGCTACTGGGTAAGCTGCAGGGGGAAAA
TGAGGGAAACAGGAACAGCAGTCGCAGCACCAGCGTGAGCACCACCATCA
CCACGATCTATTGCATAGTACGTGCCCGTAATGATGCCGCGGCTAAAGCC
CGATTATGGGAGGCAGTGGGTGCTTCGCTGTTAGATCCAAACGAGGAACG
GGTCGTCGCCTTGGCTGGAGATGTGAGTCAGCCACGCCTAGGATTGAATT
GCGAAGAAGCCTATGTGTCTTTGACGGAAAAAGTAGACTTGGTGTTACAT
GCAGGGGCGTTGGTCAACCACAATTTATCATACCGCGAGCTCTTTGGTCC
GAACGTATTGGGTACGACAAACATCATGCAATTCTGCCTGACCCCCCCCT
CGAAACCAAAGCCCCTTCATTTTATATCCACGGTAGCCGTGGCCATGGGG
GAGGGCGGACCCGGTCCGCATGTCACGGAAGTTCATATTGGGAAGGACTG
GGCAAAGGAGAGGAGGATCGGCGGAAGCGCGTATGCGGAGGGATATGGAG
CGTCGAAATGGGCTGCAGAGGTTTTGTTGCAGGATTTGAATAGGGAAACG
GGATTGCCGGTGGTTGCTTACAGGTGTAGTATGATTCTGCCGCACACCTC
GTTGTCGGGACAGATTAATGTGTCTGATATTTTTACTCGACTGATAGTGG
GCATGATATATACCGGGGTGGCTCCGCTGAGCTTCACAGATGGAGAGGGG
CAAGCGCCGCATTATGATGGTTCGTCTGTTGATTTTGTGGCGGGGGCCAT
AGTGGCGATTGCACTGGAGGGGGGGAGAGGTGGAGGGAGGGAGAAGGGAT
GTCGGCTTTTTCATGTGGTGAACCCGCATAGGATGAAGGGGGCATCGCTT
GATGATATTGTTGGGTGGGTTCGGTCAGCCGGGTATCCTGTGGAGGGAGT
TGCTCCTTACCAGGAGTGGTTTAATTTGTTCAAAAGCAAGTTGGAAGCCT
TGCCGTCTGATAAACGTGCTCAGAGCCCTCTTCCTGTTTTACACCAATGG
CAGACGCCCTTGCCTTCGCGGAAGAAGATGGAGGAGCTGTTGGTGTTGGA
CGCGACTTGCTTTAGAGATGCAGTGAAGAGGGTGACGAAAAGGGGAGACG
TTCCGGTGTTGAGTGAACGGTATTTGCACACATGTCTGTATCATATGAGT
GTAGTGGGTTTGATTGGGGCGACACCGGTGGTGGCTGAGGCGGCGGTATG
GGAAAGGTAG

protein sequence of NO03G04530.1

>NO03G04530.1-protein ID=NO03G04530.1-protein|Name=NO03G04530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1270bp
MASSASTIEWTMPGPNLARLATLLPHDPELQAYQPSPSVQSLVDAAPTTI
EIIQQLCQGYAERVALKWCSDGAMTSDYTYTMTYKEVWEKVQTMATVLST
KGWLCKKEFVAVCGFASPGWVLVDILSLYLGAVLVPLPLNVPYEDLKYML
DESGARVVFVSAEESESLAGNVLGKEGACPSVEMVVVMDYGGEEKGQAWV
AKLRSLLPASVVRVLTMQELLLEHDKKSSSSSNSSSSTFVSPAIPGAEGW
GEEPNPLLGLMYTSGSTGRPKGAMYTETLMRALWHTGFSWGAGEIPVVSL
GFLPLNHIVGRVTIYQSFTKGGVVYFVRRSDMSTLFEDFARAKPTKTMMV
PRIANMAYETYQLKKAELLQAAGLSPTSSCSSPYSSSQQQLLDRVERAAR
AYIRDKIFGGRLLFAIVGTAPSSAAVSNLIQEACEMPMVEGYGSTELGGI
TIENHINDATVLKWKLIDVPELGYTLKDHPFPRGELLVRTTTAIPGYYKH
PEATSELIDAEGFYSTGDIMEQRGERILVWIDRRKNVLKLAQGEYVSVSR
LEALFSGSADISNIYLYGNSLRSFMLGVVVPSEGLVEMAREGWRSSSGGG
KEKQELAERIKPLLRQRLDAVAKAAGLAAHEVPRDFIVQLDGFTRENSLL
TDSNKLARARLKQAFGPRLEAMYTAVEERKEKRLASLQANPDASITEQVC
AALEMTLGLGEEVGLDATFAQLGGDSLSAVRLTEHLKRSCGVEVPVAKLL
NPTATMQSLVEYLEAKGEMKDGGKEDEGGGEEIYERVHGPKQAAPLIFAK
DLMVEKFIPAAVLHPPGTGGAMDWAAKAGEGLGEGGKGMKGVLLTGANGF
LGRFLLLELLGKLQGENEGNRNSSRSTSVSTTITTIYCIVRARNDAAAKA
RLWEAVGASLLDPNEERVVALAGDVSQPRLGLNCEEAYVSLTEKVDLVLH
AGALVNHNLSYRELFGPNVLGTTNIMQFCLTPPSKPKPLHFISTVAVAMG
EGGPGPHVTEVHIGKDWAKERRIGGSAYAEGYGASKWAAEVLLQDLNRET
GLPVVAYRCSMILPHTSLSGQINVSDIFTRLIVGMIYTGVAPLSFTDGEG
QAPHYDGSSVDFVAGAIVAIALEGGRGGGREKGCRLFHVVNPHRMKGASL
DDIVGWVRSAGYPVEGVAPYQEWFNLFKSKLEALPSDKRAQSPLPVLHQW
QTPLPSRKKMEELLVLDATCFRDAVKRVTKRGDVPVLSERYLHTCLYHMS
VVGLIGATPVVAEAAVWER*

mRNA from alignment at chr3:1300278..1304623-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO03G04530.1 ID=NO03G04530.1|Name=NO03G04530.1|organism=Nannochloropsis oceanica|type=mRNA|length=4346bp|location=Sequence derived from alignment at chr3:1300278..1304623- (Nannochloropsis oceanica)
ATGGCATCCTCCGCTTCCACTATCGAATGGACCATGCCAGGACCAAATCT
TGCCCGTCTTGCTACCCTTCTCCCGCATGATCCGGAATTGCAAGCCTACC
AACCGAGTCCATCAGTTCAATCCCTCGTCGACGCCGCGCCCACCACCATC
GAAATCATTCAGCAACTATGCCAAGGGTACGCAGAACGCGTAGCATTAAA
ATGGTGTTCGGACGGAGCAATGACTTCTGACTACACATATACTATGACCT
ATAAAGAAGTATGGGAAAAAGTGCAGACAATGGCAACGGTCTTGAGCACC
AAGGGGTGGCTGTGCAAGAAGGAGTTTGTAGCCGTATGTGGGTTTGCGAG
CCCCGGGTGGGTACTTGTGGACATCCTGAGCTTGTACCTTGGAGCAGTTC
TTGTGCCTTTACCGCTGAATGTCCCTTATGAAGACTTAAAATATATGTTG
GATGAATCAGGGGCGAGGGTCGTCTTCGTCTCTGCGGAGGAGAGCGAGAG
CCTGGCAGGTAACGTGCTTGGGAAGGAGGGGGCATGTCCGTCAGTCGAGA
TGGTGGTGGTGATGGATTATGGGGGTGAGGAGAAAGGACAGGCGTGGGTG
GCGAAGCTGCGGTCTCTGCTGCCAGCGAGTGTGGTGCGGGTCCTGACGAT
GCAGGAGTTGTTGCTGGAGCACGACAAGAAGAGCAGTAGCAGTAGCAATA
GCAGCAGCAGTACCTTTGTGTCGCCGGCGATTCCGGGGGCGGAGGGGTGG
GGGGAGGAGCCGAATCCTTTGCTGGGGTTGATGTATACCTCGGGGAGCAC
CGGACGGCCGAAAGGGGCTATGTACACGGAGACGTTGATGCGGGCTTTGT
GGCACACGGGCTTTTCGTGGGGGGCGGGGGAGATCCCGGTAGTGAGCTTG
GGGTTTCTACCGTTGAATCATATCGGTACGTGCTTTCCGATCTTTTCGTC
ATTCCTCCCTTCCTCCTACCCCAGCCTTGGCTGAACAACGTTGACGCATG
CACCTCTTATCCCCTTCCTCCTTCTCTCCCCCCCTTTCTGTCAGTTGGAA
GAGTTACGATTTACCAGAGCTTCACCAAGGGCGGCGTGGTTTACTTTGTA
AGGCGTTCCGACATGTCGACGTTATTCGAAGACTTCGCTCGGGCCAAGCC
GACCAAGACAATGATGGTGGTAAGTGCATGGGTGATCGGCAAGGGAGGGA
GGGGGGGAGGGAGAGCTAGAGTATTAAGCGAACATGTGAGCCGCGCACCT
ACCTAGGCCGATCCATGCATACCTGTTGCTTATATCTCCCGTCTTTCCCC
TTCTTTTCTCACCTCCCTCACTTTTTACAGCCCCGCATTGCCAATATGGC
ATACGAAACCTATCAACTCAAGAAAGCCGAACTACTACAAGCCGCCGGCC
TCTCCCCCACCTCTTCTTGCTCCTCCCCGTACTCCTCTTCACAACAGCAG
CTGCTCGATAGAGTTGAACGCGCTGCTCGTGCGTACATCCGCGACAAGAT
ATTCGGAGGCCGTCTCCTCTTTGCGATAGTCGGGACGGCTCCTTCGTCTG
CGGCGGTGTCGAACTTGATCCAAGAGGCGTGTGAGATGCCCATGGTGGAA
GGATACGGGTCTACAGAGGTGAAGACGAGAAAAATTGGGAGAGAGGGAGG
GAGGAGGGCTGCGGACATGATAACGTTCCGAGAGCAAGCTCACACGGATA
AGCACCATCTCTTCGTCCTTTCCTCTTTTCCTCCTTTCACAGCTCGGCGG
CATCACTATCGAGAACCACATCAACGACGCCACGGTCCTCAAATGGAAAC
TCATTGACGTACCCGAGCTAGGCTACACGCTTAAAGACCATCCCTTTCCT
AGGGGGGAGCTCCTCGTCCGAACCACCACAGCCATCCCCGGGTACTACAA
ACACCCGGAGGCCACAAGTGAGTTAATTGATGCAGAAGGTTTTTATTCCA
CGGGGGACATCATGGAGCAGAGAGGGGAGAGGATACTGGTATGGATCGAT
CGGAGGAAGAATGTGTTGAAATTGGCGCAAGGGGAGTATGTGAGTGTAAG
TCGATTGGAAGCTCTGTTTTCGGGGAGTGCCGATATTTCGAATATTTACT
TGTACGGGAATAGTCTGAGGAGCTTCATGTTGGGTGTAGTTGTACCCTCG
GAGGGATTGGTGGAGATGGCGAGGGAGGGATGGAGGAGTAGTAGTGGGGG
CGGCAAAGAAAAGCAGGAACTCGCGGAAAGGATTAAGCCGTTGTTGCGGC
AACGGTTGGATGCTGTGGCGAAAGCGGCGGGGTTGGCTGCTCATGAGGTG
CCGAGGGATTTCATCGTGCAACTGGATGGCTTTACACGGGAAAACAGCCT
CTTGACAGATAGCAATAAACTGGCTCGAGCAAGGCTTAAGCAAGGTGAGT
CCCCTCCTCATTCCTTTTAGACTATCGCTGGGTACTGCAAAGCTTCCACC
CAGCAAATCTGCGTCTTATCAGCCACTAATCCTCCGTCCCTCCCAATCTC
CCTCCCTCCACATCATCATCCCGGAGCGTTTGGTCCAAGGCTCGAGGCTA
TGTACACGGCAGTGGAAGAACGCAAGGAGAAAAGACTTGCGTCCCTTCAG
GCCAATCCTGACGCGTCCATCACTGAACAGGTCTGCGCGGCGTTAGAAAT
GACCTTGGGATTAGGGGAGGAGGTGGGTTTGGATGCAACTTTTGCGCAGT
TGGGAGGGGATTCGTTGAGTGCCGTGCGATTGACGGAGCATTTGAAGCGA
TCGTGTGGGGTAGAGGTGCCCGTTGCCAAGTTGCTCAATCCAACAGCAAC
GATGCAGTCTTTAGTAGAGTATTTGGAGGCAAAGGGGGAAATGAAGGATG
GGGGGAAGGAGGATGAAGGAGGGGGAGAGGAGATATATGAACGAGTGCAT
GGTCCTAAGCAAGCAGCCCCTTTAATTTTTGCCAAGGACCTGATGGTGGA
GAAGTTCATTCCAGCGGCTGTGCTGCATCCACCCGGTACGGGGGGTGCAA
TGGATTGGGCCGCGAAGGCAGGGGAGGGCTTGGGGGAGGGAGGAAAAGGG
ATGAAGGGTGTATTGCTGACGGGCGCCAACGGCTTCCTGGGACGGTTTTT
GTTGTTGGAGCTACTGGGTAAGCTGCAGGGGGAAAATGAGGGAAACAGGA
ACAGCAGTCGCAGCACCAGCGTGAGCACCACCATCACCACGATCTATTGC
ATAGTACGTGCCCGTAATGATGCCGCGGCTAAAGCCCGATTATGGGAGGC
AGTGGGTGCTTCGCTGTTAGATCCAAACGAGGAACGGGTCGTCGCCTTGG
CTGGAGATGTGAGTCAGCCACGCCTAGGATTGAATTGCGAAGAAGCCTAT
GTGTCTTTGACGGAAAAAGTAGACTTGGTGTTACATGCAGGGGCGTTGGT
CAACCACAATTTATCATACCGCGAGCTCTTTGGTCCGAACGTATTGGGTA
CGACAAACATCATGCAATTCTGCCTGACCCCCCCCTCGAAACCAAAGCCC
CTTCATTTTATATCCACGGTAGCCGTGGCCATGGGGGAGGGCGGACCCGG
TCCGCATGTCACGGAAGTTCATATTGGGAAGGACTGGGCAAAGGAGAGGA
GGATCGGCGGAAGCGCGTATGCGGAGGGATATGGAGCGTCGAAATGGGCT
GCAGAGGTTTTGTTGCAGGATTTGAATAGGGAAACGGGATTGCCGGTGGT
TGCTTACAGGTGTAGTATGATTCTGCCGCACACCTCGTTGTCGGGACAGA
TTAATGTGTCTGATATTTTTACTCGACTGATAGTGGGCATGATATATACC
GGGGTGGCTCCGCTGAGCTTCACAGATGGAGAGGGGCAAGCGCCGCATTA
TGATGGTTCGTCTGTTGATTTTGTGGCGGGGGCCATAGTGGCGATTGCAC
TGGAGGGGGGGAGAGGTGGAGGGAGGGAGAAGGGATGTCGGCTTTTTCAT
GTGGTGAACCCGCATAGGATGAAGGGGGCATCGCTTGATGATATTGTTGG
GTGGGTTCGGTCAGCCGGGTATCCTGTGGAGGGAGTTGCTCCTTACCAGG
AGTGGTTTAATTTGTTCAAAAGCAAGTTGGAAGCCTTGCCGTCTGATAAA
CGTGCTCAGAGCCCTCTTCCTGTTTTACACCAATGGCAGACGCCCTTGCC
TTCGCGGAAGAAGATGGAGGAGCTGTTGGTGTTGGACGCGACTTGCTTTA
GAGATGCAGTGAAGAGGGTGACGAAAAGGGGAGACGTTCCGGTGTTGAGT
GAACGGTATTTGCACACATGTCTGTATCATATGAGTGTAGTGGGTTTGAT
TGGGGCGACACCGGTGGTGGCTGAGGCGGCGGTATGGGAAAGGTAG

Coding sequence (CDS) from alignment at chr3:1300278..1304623-

>NO03G04530.1 ID=NO03G04530.1|Name=NO03G04530.1|organism=Nannochloropsis oceanica|type=CDS|length=3810bp|location=Sequence derived from alignment at chr3:1300278..1304623- (Nannochloropsis oceanica)
ATGGCATCCTCCGCTTCCACTATCGAATGGACCATGCCAGGACCAAATCT
TGCCCGTCTTGCTACCCTTCTCCCGCATGATCCGGAATTGCAAGCCTACC
AACCGAGTCCATCAGTTCAATCCCTCGTCGACGCCGCGCCCACCACCATC
GAAATCATTCAGCAACTATGCCAAGGGTACGCAGAACGCGTAGCATTAAA
ATGGTGTTCGGACGGAGCAATGACTTCTGACTACACATATACTATGACCT
ATAAAGAAGTATGGGAAAAAGTGCAGACAATGGCAACGGTCTTGAGCACC
AAGGGGTGGCTGTGCAAGAAGGAGTTTGTAGCCGTATGTGGGTTTGCGAG
CCCCGGGTGGGTACTTGTGGACATCCTGAGCTTGTACCTTGGAGCAGTTC
TTGTGCCTTTACCGCTGAATGTCCCTTATGAAGACTTAAAATATATGTTG
GATGAATCAGGGGCGAGGGTCGTCTTCGTCTCTGCGGAGGAGAGCGAGAG
CCTGGCAGGTAACGTGCTTGGGAAGGAGGGGGCATGTCCGTCAGTCGAGA
TGGTGGTGGTGATGGATTATGGGGGTGAGGAGAAAGGACAGGCGTGGGTG
GCGAAGCTGCGGTCTCTGCTGCCAGCGAGTGTGGTGCGGGTCCTGACGAT
GCAGGAGTTGTTGCTGGAGCACGACAAGAAGAGCAGTAGCAGTAGCAATA
GCAGCAGCAGTACCTTTGTGTCGCCGGCGATTCCGGGGGCGGAGGGGTGG
GGGGAGGAGCCGAATCCTTTGCTGGGGTTGATGTATACCTCGGGGAGCAC
CGGACGGCCGAAAGGGGCTATGTACACGGAGACGTTGATGCGGGCTTTGT
GGCACACGGGCTTTTCGTGGGGGGCGGGGGAGATCCCGGTAGTGAGCTTG
GGGTTTCTACCGTTGAATCATATCGTTGGAAGAGTTACGATTTACCAGAG
CTTCACCAAGGGCGGCGTGGTTTACTTTGTAAGGCGTTCCGACATGTCGA
CGTTATTCGAAGACTTCGCTCGGGCCAAGCCGACCAAGACAATGATGGTG
CCCCGCATTGCCAATATGGCATACGAAACCTATCAACTCAAGAAAGCCGA
ACTACTACAAGCCGCCGGCCTCTCCCCCACCTCTTCTTGCTCCTCCCCGT
ACTCCTCTTCACAACAGCAGCTGCTCGATAGAGTTGAACGCGCTGCTCGT
GCGTACATCCGCGACAAGATATTCGGAGGCCGTCTCCTCTTTGCGATAGT
CGGGACGGCTCCTTCGTCTGCGGCGGTGTCGAACTTGATCCAAGAGGCGT
GTGAGATGCCCATGGTGGAAGGATACGGGTCTACAGAGCTCGGCGGCATC
ACTATCGAGAACCACATCAACGACGCCACGGTCCTCAAATGGAAACTCAT
TGACGTACCCGAGCTAGGCTACACGCTTAAAGACCATCCCTTTCCTAGGG
GGGAGCTCCTCGTCCGAACCACCACAGCCATCCCCGGGTACTACAAACAC
CCGGAGGCCACAAGTGAGTTAATTGATGCAGAAGGTTTTTATTCCACGGG
GGACATCATGGAGCAGAGAGGGGAGAGGATACTGGTATGGATCGATCGGA
GGAAGAATGTGTTGAAATTGGCGCAAGGGGAGTATGTGAGTGTAAGTCGA
TTGGAAGCTCTGTTTTCGGGGAGTGCCGATATTTCGAATATTTACTTGTA
CGGGAATAGTCTGAGGAGCTTCATGTTGGGTGTAGTTGTACCCTCGGAGG
GATTGGTGGAGATGGCGAGGGAGGGATGGAGGAGTAGTAGTGGGGGCGGC
AAAGAAAAGCAGGAACTCGCGGAAAGGATTAAGCCGTTGTTGCGGCAACG
GTTGGATGCTGTGGCGAAAGCGGCGGGGTTGGCTGCTCATGAGGTGCCGA
GGGATTTCATCGTGCAACTGGATGGCTTTACACGGGAAAACAGCCTCTTG
ACAGATAGCAATAAACTGGCTCGAGCAAGGCTTAAGCAAGCGTTTGGTCC
AAGGCTCGAGGCTATGTACACGGCAGTGGAAGAACGCAAGGAGAAAAGAC
TTGCGTCCCTTCAGGCCAATCCTGACGCGTCCATCACTGAACAGGTCTGC
GCGGCGTTAGAAATGACCTTGGGATTAGGGGAGGAGGTGGGTTTGGATGC
AACTTTTGCGCAGTTGGGAGGGGATTCGTTGAGTGCCGTGCGATTGACGG
AGCATTTGAAGCGATCGTGTGGGGTAGAGGTGCCCGTTGCCAAGTTGCTC
AATCCAACAGCAACGATGCAGTCTTTAGTAGAGTATTTGGAGGCAAAGGG
GGAAATGAAGGATGGGGGGAAGGAGGATGAAGGAGGGGGAGAGGAGATAT
ATGAACGAGTGCATGGTCCTAAGCAAGCAGCCCCTTTAATTTTTGCCAAG
GACCTGATGGTGGAGAAGTTCATTCCAGCGGCTGTGCTGCATCCACCCGG
TACGGGGGGTGCAATGGATTGGGCCGCGAAGGCAGGGGAGGGCTTGGGGG
AGGGAGGAAAAGGGATGAAGGGTGTATTGCTGACGGGCGCCAACGGCTTC
CTGGGACGGTTTTTGTTGTTGGAGCTACTGGGTAAGCTGCAGGGGGAAAA
TGAGGGAAACAGGAACAGCAGTCGCAGCACCAGCGTGAGCACCACCATCA
CCACGATCTATTGCATAGTACGTGCCCGTAATGATGCCGCGGCTAAAGCC
CGATTATGGGAGGCAGTGGGTGCTTCGCTGTTAGATCCAAACGAGGAACG
GGTCGTCGCCTTGGCTGGAGATGTGAGTCAGCCACGCCTAGGATTGAATT
GCGAAGAAGCCTATGTGTCTTTGACGGAAAAAGTAGACTTGGTGTTACAT
GCAGGGGCGTTGGTCAACCACAATTTATCATACCGCGAGCTCTTTGGTCC
GAACGTATTGGGTACGACAAACATCATGCAATTCTGCCTGACCCCCCCCT
CGAAACCAAAGCCCCTTCATTTTATATCCACGGTAGCCGTGGCCATGGGG
GAGGGCGGACCCGGTCCGCATGTCACGGAAGTTCATATTGGGAAGGACTG
GGCAAAGGAGAGGAGGATCGGCGGAAGCGCGTATGCGGAGGGATATGGAG
CGTCGAAATGGGCTGCAGAGGTTTTGTTGCAGGATTTGAATAGGGAAACG
GGATTGCCGGTGGTTGCTTACAGGTGTAGTATGATTCTGCCGCACACCTC
GTTGTCGGGACAGATTAATGTGTCTGATATTTTTACTCGACTGATAGTGG
GCATGATATATACCGGGGTGGCTCCGCTGAGCTTCACAGATGGAGAGGGG
CAAGCGCCGCATTATGATGGTTCGTCTGTTGATTTTGTGGCGGGGGCCAT
AGTGGCGATTGCACTGGAGGGGGGGAGAGGTGGAGGGAGGGAGAAGGGAT
GTCGGCTTTTTCATGTGGTGAACCCGCATAGGATGAAGGGGGCATCGCTT
GATGATATTGTTGGGTGGGTTCGGTCAGCCGGGTATCCTGTGGAGGGAGT
TGCTCCTTACCAGGAGTGGTTTAATTTGTTCAAAAGCAAGTTGGAAGCCT
TGCCGTCTGATAAACGTGCTCAGAGCCCTCTTCCTGTTTTACACCAATGG
CAGACGCCCTTGCCTTCGCGGAAGAAGATGGAGGAGCTGTTGGTGTTGGA
CGCGACTTGCTTTAGAGATGCAGTGAAGAGGGTGACGAAAAGGGGAGACG
TTCCGGTGTTGAGTGAACGGTATTTGCACACATGTCTGTATCATATGAGT
GTAGTGGGTTTGATTGGGGCGACACCGGTGGTGGCTGAGGCGGCGGTATG
GGAAAGGTAG

Synonyms

Publications