|
|
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr3 | genome | chr3:1253225..1257535 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO03G04350.1 vs.
Match: EWM29862.1 (vacuolar protein sorting-associated protein 41 [Nannochloropsis gaditana]) HSP 1 Score: 1254.6 bits (3245), Expect = 0.000e+0 Identity = 730/1320 (55.30%), Postives = 889/1320 (67.35%), Query Frame = 0
Query: 38 SSEDEDIDRSSDDEDDNSAPSPQPPQPPEEA-EEEMPILKYHRMKAHVQAIKQATPGSENQITALCMHPRCLIVGTLAGNLHLLDYQGSGQELGRIRADAHKGQRIRCISIDDSGEFVVSCSDAGTVVVVSLTFLTSSSLGTTFPAAGSASRGGGG---GGGEGGVASSNFSASSSSSSSSSSSNPSPPTASTADARGGNSGSTFTSSGTAITGRSSSSGNVVVGSEQIFCVSQEPLYAVHLDPGYRRKTEKGFVCGGQEGKLILTRKGFFSGSKEECLHEGEGAITAIAWRGGLVAWANEEGVKILDIENDERISFVERPEVEGGSGGGEELRCSLVWESETVLLIGWFDTFIVLQVKPRVEGGREGGLE------------------------GGAGRMLRMGEIVVRWKADCVICGVFPFDVDSVAILGYVGLVEGEDDDEDEAENEDEDSMSFGRRIGDGAGASLPRASPPPPVLPKSEKKVICRAELQLRTRKEGRIFSAEILPFDGEERVRDSTGFCLASSFALTCRKVPGPGVWRLPRGMGRG---------REGGTLGGKGRSVEAGQAQQERHLAPPPSSRSS-----------SSSIVDTGESFMPVMLMAAPEDLIVARVRNVEDWILFVLQHGALGAAIELALLNRHLLTQQRFHALATSYLEQLLARGAFERAAAECPRLLGEEAALWERWIYSFASRGKLSVLAPFIPLQTPRLNQTTYEMVLMHFLDNDKRSFLEIIKKWGGQQLKFGDGAGREGGRGGGKEKLYDLQEVSKRVGAMVGSAPDETLLQAQAYLFELQGKHAAALGVYWELFQVVQAG-------GKEGRREEERKRLFAPVFGMIEGHDLFEAAAARVLTLVQMDRGQAGGLLIRHVDRFPVESVVRQLQQQQQQEDQQQEDGQIRRQHDSSAPAATASAASTVSTVRGRAASSSSSSSSSSLLLWYLDLLFRRLPDQYNHPDYSRYHLLQVELYAAAAPTFRPVAGSSHIDT-------IASTTSANVDEDAVDENDSSLDPPYTSALLSFLTWSNHVRLETALAACERRTPPLYDEMVYILGRIGDTEEALRILLFEIGSVRRAIDFVDRQDKGLWKDLTEHSLNHPVFLAGLLRHAGEYNVDLARSLLQQIPGEMRIKGLKNKLLNIVASYRFERTLHEGVRRVAEQEWVAATRRFHHAHRRAIRVNIPDTLCQGCSNPLVGPAPQSLPLSLPPRALASVDARELHVFACKDSYHDVCCLALERRGG--EGGREGGR-----EGKGNERGHLTFQCVKCREEAQYELRGGERRGGIGGRGGG 1289
S DE++D ++ D + + PP PP+ EE+MP+LKYHRMKAHV+ + Q G + QITALCMHPRCLIVGT G +HLLDYQ G+ELG IRA AH G++IRC SIDD+GE++ SCSDAG VVV SLTF + ++ + S +RG E +A + + + +++ S P A+ + G + TS T TG S G VV+GSEQ+F VS++PL AVHLDPGYRR +EK FV GGQEG+L+L RKGFFS +EE LHE EG ITAIAWRG LVAWANEEGVK+LD+E +ERI F+ RPE+EG S +LRCSL+WESET LLIGWFDTF+VLQ+K R G L A R R+GE+ VRWKADCVI G++PFDVDSVA+LGYV LVEGE + + E M R+ + + P P P S K V+CRAELQLR+R+EGR+FS +ILP GEERVRDS GF ASSF LTCR+VPGPG+WRLPRG+GR G+ GG + AG R L + SS SS DTGESFMPVML+A PEDL+VARVR VED IL+VLQ GA+GAAIELALLNRHLLT QRFHALATSYLE LLA+GA+ RAAAECPRLLGEEA+ WERWIY+FA+R +L+ LAPFIPL++PRL+++TYEMVL HFLD D+ +FL IKKWG QQ KFG GA EGG G LYDL+++SKRV +V APD LLQA AYL + QG+ AA+L VYW+LF+++ A G + RK LF+PVF MIE H+ F+AAA RV LV+MDR +A LL+R+VDR PV SVVRQLQ +++ + + + ST SS +S+S SL+LWYLDLLFRRLPD YNHP+++++H+LQVELYAAAAP F P SH + I + + E+A DE D +P YTS LLSFL WSNHVRLETALAACERR PPLYDE+VYIL RIG +EALR+LL EI SVRRAI+FVDR DKGLW++LT HSL HP FLAGLLRHAG YNVDLARSL++ IP MRI+GL+ KLLNIVASYRFERTLHE RRVAE ++VAATRRFHHA RRA+RV+IP + CQGC P GP+P P LPPRA SVD RELHVF+CK YHD+CCLA+ER G E G+EGG+ + +ER + F C CR++AQY+L G+ +GG+ GG
Sbjct: 2 SDADEELDELGAEDGDVNGEASTPPIPPQSTGEEDMPVLKYHRMKAHVETV-QRVGGRDTQITALCMHPRCLIVGTSTGTVHLLDYQDKGRELGLIRAAAHGGRQIRCFSIDDTGEYLASCSDAGVVVVTSLTFPAQTLSSSSSFLSPSLTRGTATFKTDRKEEEIAETVKAGGGAVAATKLSFPSETPQAAAVLKQDGIEPVSTTSQSTGDTGYDSG-GQVVIGSEQVFRVSKQPLLAVHLDPGYRRISEKAFVTGGQEGRLVLGRKGFFSSYREETLHENEGPITAIAWRGSLVAWANEEGVKVLDVEGEERICFLARPEIEGRS---TDLRCSLLWESETSLLIGWFDTFMVLQIKARAPGTTPERLPPASAASSSPASSSSSASSSSPSHPSSAQRGSRVGEMTVRWKADCVISGLWPFDVDSVALLGYVSLVEGEAGEGEAGVQGLERGME---RLTTSSQDTTDSDQDPVPGQPPSSK-VVCRAELQLRSRREGRLFSGDILPVHGEERVRDSLGFLFASSFGLTCRRVPGPGLWRLPRGLGRAGGLIAKAGAAHAGSQGGSKDATSAGCHLASRGLGDGGGADSSHGPGRGQDLSASSPASDTGESFMPVMLIAGPEDLLVARVRGVEDRILWVLQKGAMGAAIELALLNRHLLTHQRFHALATSYLEVLLAQGAYGRAAAECPRLLGEEASSWERWIYTFAARRRLASLAPFIPLESPRLSRSTYEMVLNHFLDCDREAFLSTIKKWGTQQQKFGRGARDEGGVEGRSGGLYDLEDLSKRVTNIVAQAPDPLLLQAHAYLLQRQGRFAASLAVYWDLFRLLSAAARRRSPRGSAAGDMQTRKHLFSPVFSMIEEHNFFDAAAERVSLLVKMDRSKAADLLVRYVDRLPVASVVRQLQLEERGGEGE---------------------GAVPSTALAGHPQSSHASASPSLVLWYLDLLFRRLPDHYNHPEFAQFHVLQVELYAAAAPPFCPAPERSHTNAKDEDTVKIKDSGAHGSGENASDEEDGVAEPAYTSDLLSFLMWSNHVRLETALAACERRQPPLYDEIVYILSRIGHNKEALRLLLVEIRSVRRAIEFVDRHDKGLWRELTAHSLQHPRFLAGLLRHAGNYNVDLARSLVEDIPDAMRIRGLQPKLLNIVASYRFERTLHEESRRVAEHDYVAATRRFHHAQRRAVRVDIPQSRCQGCLEPFAGPSPAKPPPDLPPRAPESVDVRELHVFSCKHFYHDICCLAVERHGSAPEAGKEGGKTVGRQSPRLHERSYYKFYCQHCRDQAQYDLAEGK----VGGKKGG 1287
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO03G04350.1 ID=NO03G04350.1|Name=NO03G04350.1|organism=Nannochloropsis oceanica|type=mRNA|length=4110bp
CTACAGGACAAGCATGAGTTCGGCCACAAATGACGATCCAACTCGGGGCA
CGGCTGAGGAGGAAGCGGAGCAGGAAGAGGAAGAGGACTCTTCGTCATCC
GAAGAGGACTCCTCCTGTACGTCATCATCAGAAGACGAGGACATAGATAG
GAGCAGCGACGATGAGGACGACAATTCAGCCCCATCACCTCAACCACCAC
AACCACCTGAGGAAGCAGAAGAGGAGATGCCCATCCTGAAATACCACCGC
ATGAAAGCACACGTCCAAGCCATCAAGCAAGCCACCCCAGGCAGCGAAAA
TCAAATCACCGCACTATGCATGCATCCGCGTTGCTTGATTGTGGGTACTT
TGGCGGGAAATCTACATTTGTTGGACTATCAGGGAAGCGGACAGGAGTTG
GGACGCATCCGCGCGGACGCGCATAAAGGACAGCGGATACGTTGTATAAG
TATTGATGACAGTGGGGAATTTGTGGTCAGTTGTTCGGATGCGGGGACGG
TGGTGGTAGTATCGCTGACATTCCTTACGTCATCCTCGCTTGGAACGACG
TTCCCAGCTGCTGGTAGTGCTTCTAGAGGAGGGGGAGGAGGAGGAGGAGA
GGGAGGGGTTGCATCGAGTAATTTCTCCGCGTCATCTTCCTCCTCCTCCT
CCTCTTCCTCCTCCAACCCATCCCCCCCTACCGCTTCCACTGCTGATGCC
AGGGGAGGGAACAGCGGAAGCACCTTTACAAGCTCTGGCACCGCCATCAC
AGGCAGGAGCAGCAGTAGTGGGAATGTAGTGGTCGGCTCCGAGCAGATAT
TTTGCGTGAGCCAAGAGCCCTTATACGCCGTCCACCTCGACCCAGGGTAT
CGACGCAAGACCGAGAAAGGGTTTGTATGCGGCGGGCAGGAGGGTAAATT
GATTCTGACAAGAAAAGGTTTCTTCAGTGGTAGTAAGGAGGAGTGCTTGC
ATGAAGGGGAGGGGGCGATCACTGCTATTGCATGGAGGGGGGGATTGGTG
GCTTGGGCAAATGAGGAAGGAGTCAAAATTTTGGATATTGAAAATGATGA
GAGGATAAGCTTTGTAGAGCGGCCGGAGGTGGAGGGAGGGAGTGGCGGAG
GGGAGGAGTTGAGGTGCTCGTTGGTGTGGGAGAGTGAGACGGTGTTGTTG
ATTGGGTGGTTTGATACTTTCATCGTATTGCAGGTGAAACCTCGAGTGGA
GGGAGGAAGGGAGGGAGGTCTAGAGGGAGGTGCCGGACGGATGTTGAGGA
TGGGGGAGATTGTGGTGAGGTGGAAGGCGGACTGTGTGATATGTGGTGTG
TTTCCCTTCGACGTGGACTCGGTGGCCATCCTGGGGTACGTGGGGTTGGT
CGAGGGGGAGGACGATGACGAGGACGAGGCCGAAAACGAAGATGAGGACA
GCATGTCTTTTGGGAGAAGAATAGGTGATGGTGCGGGCGCAAGTCTCCCT
AGAGCATCGCCACCACCGCCCGTACTCCCCAAATCAGAAAAAAAGGTGAT
ATGTCGTGCGGAGCTCCAGTTGCGGACTCGGAAAGAGGGCCGTATTTTTT
CTGCGGAAATTTTGCCTTTTGATGGGGAGGAGAGGGTGAGAGACTCGACG
GGGTTTTGTCTCGCTTCCAGCTTTGCATTGACATGCAGAAAGGTCCCAGG
GCCGGGAGTGTGGCGGTTACCCCGAGGGATGGGGAGAGGGAGGGAAGGAG
GGACGCTAGGGGGTAAAGGTAGAAGTGTCGAAGCCGGACAAGCGCAACAG
GAGCGACATTTAGCCCCCCCTCCTTCCTCCCGCTCTTCCTCGTCCTCAAT
CGTCGACACGGGCGAGAGCTTTATGCCGGTGATGTTGATGGCCGCCCCTG
AGGACTTGATCGTTGCGCGGGTCCGAAACGTGGAAGATTGGATTTTGTTC
GTCCTGCAACACGGCGCTTTGGGGGCCGCCATTGAACTTGCCCTCCTCAA
CCGTCATTTACTCACTCAACAGCGGTTCCACGCCCTGGCGACTTCCTACC
TGGAGCAACTCTTGGCTCGGGGTGCTTTTGAAAGAGCAGCGGCCGAATGC
CCGAGGTTGTTGGGGGAGGAGGCAGCGTTGTGGGAACGTTGGATCTATAG
CTTCGCCTCAAGGGGAAAACTGAGTGTACTTGCTCCATTTATACCATTGC
AGACCCCAAGATTGAACCAAACTACATATGAGATGGTCTTGATGCATTTC
TTGGATAACGACAAGAGAAGCTTTTTGGAGATCATCAAGAAATGGGGGGG
GCAACAGTTGAAGTTTGGGGATGGTGCTGGAAGGGAGGGAGGGAGGGGGG
GAGGGAAGGAAAAACTGTACGATTTACAAGAGGTGAGTAAGAGGGTGGGG
GCGATGGTGGGGTCGGCCCCGGATGAGACGTTGCTGCAAGCACAGGCCTA
TTTGTTTGAACTGCAGGGGAAACATGCGGCAGCGCTGGGCGTGTACTGGG
AGCTGTTCCAGGTTGTGCAGGCGGGGGGTAAGGAGGGGAGGAGAGAGGAG
GAGAGAAAGAGGTTGTTTGCGCCTGTCTTTGGGATGATTGAGGGGCACGA
TCTGTTTGAGGCGGCGGCGGCGAGGGTACTGACGCTAGTGCAGATGGATA
GAGGGCAGGCTGGGGGCTTGTTGATAAGGCATGTAGACCGTTTCCCGGTC
GAGTCGGTGGTTCGGCAGTTGCAGCAGCAACAGCAACAGGAGGACCAGCA
GCAAGAGGACGGGCAAATTCGACGGCAGCATGATTCTTCTGCTCCAGCTG
CTACTGCATCGGCGGCATCAACGGTATCGACGGTGCGGGGAAGGGCGGCT
TCTAGCTCCTCCTCATCCTCCTCCTCGTCGTTATTGCTGTGGTACTTGGA
TTTGCTCTTTCGACGGTTGCCTGATCAGTACAACCACCCAGATTACAGCC
GCTATCACTTGCTGCAGGTGGAGCTTTATGCCGCAGCCGCCCCAACCTTC
CGTCCCGTCGCCGGCAGCAGCCATATCGACACTATTGCCTCCACCACCTC
TGCGAACGTAGACGAAGATGCCGTCGACGAAAATGATAGCAGCCTTGACC
CTCCATACACCTCAGCCTTGCTCTCTTTTCTCACCTGGAGCAATCACGTC
CGGCTGGAAACGGCCTTGGCAGCATGTGAGCGGCGCACGCCTCCTTTATA
CGATGAAATGGTTTACATTTTGGGGAGGATCGGCGATACGGAAGAAGCCT
TGCGTATTCTTTTGTTCGAGATAGGGAGTGTGCGACGCGCGATTGACTTT
GTCGATCGTCAGGATAAGGGCCTTTGGAAGGACTTAACCGAGCATTCCCT
GAACCATCCTGTTTTTCTGGCAGGGCTACTGAGGCATGCGGGGGAGTATA
ATGTCGACTTAGCCCGGTCATTACTACAGCAGATCCCAGGCGAGATGAGG
ATCAAGGGGTTGAAGAACAAGCTGCTGAACATAGTGGCGTCCTATCGCTT
TGAACGCACGTTGCACGAAGGAGTCCGACGCGTGGCCGAGCAGGAGTGGG
TGGCTGCCACGCGGCGTTTTCACCACGCCCACCGACGTGCAATAAGGGTG
AATATTCCCGACACACTTTGTCAAGGGTGTTCAAACCCGCTGGTGGGTCC
GGCGCCCCAAAGCCTTCCTCTTTCCCTCCCTCCCCGGGCGTTGGCCTCGG
TGGATGCCAGGGAGCTGCATGTCTTTGCGTGCAAAGATTCTTACCACGAC
GTTTGTTGCTTAGCGTTGGAGAGGCGAGGGGGAGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGGAAAGGGAATGAGCGGGGGCATTTGACGTTTCAGTGTG
TGAAATGTCGGGAGGAGGCTCAATATGAATTGCGAGGGGGAGAGAGGAGG
GGAGGGATAGGTGGAAGGGGAGGAGGAGGAGGAGAAGGAGGAGGTGGAGG
AGGCCGTGTTCCAGGGCGGGGGCATGACGAGTAAAATTGGTGGCGGTGGG
GGAAGGAAGGAGGGGAGAAGAGAGGAGGAAAGAGTACACTGTACAGTAGA
AAGGCGTGATGCATTACTCGCACAGGCACACGACCAATATATAGCAAGCA
AGTAAATAGATCGAGCATAACGCAGAAGAGAAAAGCAAAATTGGTCCACG
ACTAAGAGAA back to topprotein sequence of NO03G04350.1 >NO03G04350.1-protein ID=NO03G04350.1-protein|Name=NO03G04350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1307bp
MSSATNDDPTRGTAEEEAEQEEEEDSSSSEEDSSCTSSSEDEDIDRSSDD
EDDNSAPSPQPPQPPEEAEEEMPILKYHRMKAHVQAIKQATPGSENQITA
LCMHPRCLIVGTLAGNLHLLDYQGSGQELGRIRADAHKGQRIRCISIDDS
GEFVVSCSDAGTVVVVSLTFLTSSSLGTTFPAAGSASRGGGGGGGEGGVA
SSNFSASSSSSSSSSSSNPSPPTASTADARGGNSGSTFTSSGTAITGRSS
SSGNVVVGSEQIFCVSQEPLYAVHLDPGYRRKTEKGFVCGGQEGKLILTR
KGFFSGSKEECLHEGEGAITAIAWRGGLVAWANEEGVKILDIENDERISF
VERPEVEGGSGGGEELRCSLVWESETVLLIGWFDTFIVLQVKPRVEGGRE
GGLEGGAGRMLRMGEIVVRWKADCVICGVFPFDVDSVAILGYVGLVEGED
DDEDEAENEDEDSMSFGRRIGDGAGASLPRASPPPPVLPKSEKKVICRAE
LQLRTRKEGRIFSAEILPFDGEERVRDSTGFCLASSFALTCRKVPGPGVW
RLPRGMGRGREGGTLGGKGRSVEAGQAQQERHLAPPPSSRSSSSSIVDTG
ESFMPVMLMAAPEDLIVARVRNVEDWILFVLQHGALGAAIELALLNRHLL
TQQRFHALATSYLEQLLARGAFERAAAECPRLLGEEAALWERWIYSFASR
GKLSVLAPFIPLQTPRLNQTTYEMVLMHFLDNDKRSFLEIIKKWGGQQLK
FGDGAGREGGRGGGKEKLYDLQEVSKRVGAMVGSAPDETLLQAQAYLFEL
QGKHAAALGVYWELFQVVQAGGKEGRREEERKRLFAPVFGMIEGHDLFEA
AAARVLTLVQMDRGQAGGLLIRHVDRFPVESVVRQLQQQQQQEDQQQEDG
QIRRQHDSSAPAATASAASTVSTVRGRAASSSSSSSSSSLLLWYLDLLFR
RLPDQYNHPDYSRYHLLQVELYAAAAPTFRPVAGSSHIDTIASTTSANVD
EDAVDENDSSLDPPYTSALLSFLTWSNHVRLETALAACERRTPPLYDEMV
YILGRIGDTEEALRILLFEIGSVRRAIDFVDRQDKGLWKDLTEHSLNHPV
FLAGLLRHAGEYNVDLARSLLQQIPGEMRIKGLKNKLLNIVASYRFERTL
HEGVRRVAEQEWVAATRRFHHAHRRAIRVNIPDTLCQGCSNPLVGPAPQS
LPLSLPPRALASVDARELHVFACKDSYHDVCCLALERRGGEGGREGGREG
KGNERGHLTFQCVKCREEAQYELRGGERRGGIGGRGGGGGEGGGGGGRVP
GRGHDE* back to topmRNA from alignment at chr3:1253225..1257535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO03G04350.1 ID=NO03G04350.1|Name=NO03G04350.1|organism=Nannochloropsis oceanica|type=mRNA|length=4311bp|location=Sequence derived from alignment at chr3:1253225..1257535+ (Nannochloropsis oceanica)
CTACAGGACAAGCATGAGTTCGGCCACAAATGACGATCCAACTCGGGGCA
CGGCTGAGGAGGAAGCGGAGCAGGAAGAGGAAGAGGACTCTTCGTCATCC
GAAGAGGTACGTTCAGCAGCACTTCCACCTTCCCATCGCCTCCCCCCTCA
AACCGTGCCCTGTCCACCCTCCCTCTAGGACTCCTCCTGTACGTCATCAT
CAGAAGACGAGGACATAGATAGGAGCAGCGACGATGAGGACGACAATTCA
GCCCCATCACCTCAACCACCACAACCACCTGAGGAAGCAGAAGAGGAGAT
GCCCATCCTGAAATACCACCGCATGAAAGCACACGTCCAAGCCATCAAGC
AAGCCACCCCAGGCAGCGAAAATCAAATCACCGCACTATGCATGCATCCG
CGTTGCTTGATTGTGGGTACTTTGGCGGGAAATCTACATTTGTTGGACTA
TCAGGGAAGCGGACAGGAGTTGGGACGCATCCGCGCGGACGCGCATAAAG
GACAGCGGATACGTTGTATAAGTATTGATGACAGTGGGGAATTTGTGGTC
AGTTGTTCGGATGCGGGGACGGTGGTGGTAGTATCGCTGACATTCCTTAC
GTCATCCTCGCTTGGAACGACGTTCCCAGCTGCTGGTAGTGCTTCTAGAG
GAGGGGGAGGAGGAGGAGGAGAGGGAGGGGTTGCATCGAGTAATTTCTCC
GCGTCATCTTCCTCCTCCTCCTCCTCTTCCTCCTCCAACCCATCCCCCCC
TACCGCTTCCACTGCTGATGCCAGGGGAGGGAACAGCGGAAGCACCTTTA
CAAGCTCTGGCACCGCCATCACAGGCAGGAGCAGCAGTAGTGGGAATGTA
GTGGTCGGCTCCGAGCAGATATTTTGCGTGAGCCAAGAGCCCTTATACGC
CGTCCACCTCGACCCAGGGTATCGACGCAAGACCGAGAAAGGGTTTGTAT
GCGGCGGGCAGGAGGGTAAATTGATTCTGACAAGAAAAGGTTTCTTCAGT
GGTAGTAAGGAGGAGTGCTTGCATGAAGGGGAGGGGGCGATCACTGCTAT
TGCATGGAGGGGGGGATTGGTGGCTTGGGCAAATGAGGAAGGAGTCAAAA
TTTTGGATATTGAAAATGATGAGAGGATAAGCTTTGTAGAGCGGCCGGAG
GTGGAGGGAGGGAGTGGCGGAGGGGAGGAGTTGAGGTGCTCGTTGGTGTG
GGAGAGTGAGACGGTGTTGTTGATTGGGTGGTTTGATACTTTCATCGTAT
TGCAGGTGAAACCTCGAGTGGAGGGAGGAAGGGAGGGAGGTCTAGAGGGA
GGTGCCGGACGGATGTTGAGGATGGGGGAGATTGTGGTGAGGTGGAAGGC
GGACTGTGTGATATGTGGTGTGTTTCCCTTCGACGTGGACTCGGTGGCCA
TCCTGGGGTACGTGGGGTTGGTCGAGGGGGAGGACGATGACGAGGACGAG
GCCGAAAACGAAGATGAGGACAGCATGTCTTTTGGGAGAAGAATAGGTGA
TGGTGCGGGCGCAAGTCTCCCTAGAGCATCGCCACCACCGCCCGTACTCC
CCAAATCAGAAAAAAAGGTGATATGTCGTGCGGAGCTCCAGTTGCGGACT
CGGAAAGAGGGCCGTATTTTTTCTGCGGAAATTTTGCCTTTTGATGGGGA
GGAGAGGGTGAGAGACTCGACGGGGTTTTGTCTCGCTTCCAGCTTTGCAT
TGACATGCAGAAAGGTCCCAGGGCCGGGAGTGTGGCGGTTACCCCGAGGG
ATGGGGAGAGGGAGGGAAGGAGGGACGCTAGGGGGTAAAGGTAGAAGTGT
CGAAGCCGGACAAGCGCAACAGGAGCGACATTTAGCCCCCCCTCCTTCCT
CCCGCTCTTCCTCGTCCTCAATCGTCGACACGGGCGAGAGCTTTATGCCG
GTGATGTTGATGGCCGCCCCTGAGGACTTGATCGTTGCGCGGGTCCGAAA
CGTGGAAGATTGGATTTTGTTCGTCCTGCAACACGGCGCTTTGGGGGCCG
CCATTGAACTTGCCCTCCTCAACCGTCATTTACTCACTCAACAGCGGTTC
CACGCCCTGGCGACTTCCTACCTGGAGCAACTCTTGGCTCGGGGTGCTTT
TGAAAGAGCAGCGGCCGAATGCCCGAGGTTGTTGGGGGAGGAGGCAGCGT
TGTGGGAACGTTGGATCTATAGCTTCGCCTCAAGGGGAAAACTGAGTGTA
CTTGCTCCATTTATACCATTGCAGACCCCAAGATTGAACCAAACTACATA
TGAGATGGTCTTGATGCATTTCTTGGATAACGACAAGAGAAGCTTTTTGG
AGATCATCAAGAAATGGGGGGGGCAACAGTTGAAGTTTGGGGATGGTGCT
GGAAGGGAGGGAGGGAGGGGGGGAGGGAAGGAAAAACTGTACGATTTACA
AGAGGTGAGTAAGAGGGTGGGGGCGATGGTGGGGTCGGCCCCGGATGAGA
CGTTGCTGCAAGCACAGGCCTATTTGTTTGAACTGCAGGGGAAACATGCG
GCAGCGCTGGGCGTGTACTGGGAGCTGTTCCAGGTTGTGCAGGCGGGGGG
TAAGGAGGGGAGGAGAGAGGAGGAGAGAAAGAGGTTGTTTGCGCCTGTCT
TTGGGATGATTGAGGGGCACGATCTGTTTGAGGCGGCGGCGGCGAGGGTA
CTGACGCTAGTGCAGATGGATAGAGGGCAGGCTGGGGGCTTGTTGATAAG
GCATGTAGACCGTTTCCCGGTCGAGTCGGTGGTTCGGCAGTTGCAGCAGC
AACAGCAACAGGAGGACCAGCAGCAAGAGGACGGGCAAATTCGACGGCAG
CATGATTCTTCTGCTCCAGCTGCTACTGCATCGGCGGCATCAACGGTATC
GACGGTGCGGGGAAGGGCGGCTTCTAGCTCCTCCTCATCCTCCTCCTCGT
CGTTATTGCTGTGGTACTTGGATTTGCTCTTTCGACGGTTGCCTGATCAG
TACAACCACCCAGATTACAGCCGCTATCACTTGCTGCAGGTGGAGCTTTA
TGGTACGTAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGCCGGGGG
AGTTTGGACACGGTGTATGAAAAGCACGTGATGTAGATCTTTTTTTCTTT
ATCCCCTCCTTTTCTCTTAATCGTGACACAGCCGCAGCCGCCCCAACCTT
CCGTCCCGTCGCCGGCAGCAGCCATATCGACACTATTGCCTCCACCACCT
CTGCGAACGTAGACGAAGATGCCGTCGACGAAAATGATAGCAGCCTTGAC
CCTCCATACACCTCAGCCTTGCTCTCTTTTCTCACCTGGAGCAATCACGT
CCGGCTGGAAACGGCCTTGGCAGCATGTGAGCGGCGCACGCCTCCTTTAT
ACGATGAAATGGTTTACATTTTGGGGAGGATCGGCGATACGGAAGAAGCC
TTGCGTATTCTTTTGTTCGAGATAGGGAGTGTGCGACGCGCGATTGACTT
TGTCGATCGTCAGGATAAGGGCCTTTGGAAGGACTTAACCGAGCATTCCC
TGAACCATCCTGTTTTTCTGGCAGGGCTACTGAGGCATGCGGGGGAGTAT
AATGTCGACTTAGCCCGGTCATTACTACAGCAGATCCCAGGCGAGATGAG
GATCAAGGGGTTGAAGAACAAGCTGCTGAACATAGTGGCGTCCTATCGCT
TTGAACGCACGTTGCACGAAGGAGTCCGACGCGTGGCCGAGCAGGAGTGG
GTGGCTGCCACGCGGCGTTTTCACCACGCCCACCGACGTGCAATAAGGGT
GAATATTCCCGACACACTTTGTCAAGGGTGTTCAAACCCGCTGGTGGGTC
CGGCGCCCCAAAGCCTTCCTCTTTCCCTCCCTCCCCGGGCGTTGGCCTCG
GTGGATGCCAGGGAGCTGCATGTCTTTGCGTGCAAAGATTCTTACCACGA
CGTTTGTTGCTTAGCGTTGGAGAGGCGAGGGGGAGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGGAAAGGGAATGAGCGGGGGCATTTGACGTTTCAGTGT
GTGAAATGTCGGGAGGAGGCTCAATATGAATTGCGAGGGGGAGAGAGGAG
GGGAGGGATAGGTGGAAGGGGAGGAGGAGGAGGAGAAGGAGGAGGTGGAG
GAGGCCGTGTTCCAGGGCGGGGGCATGACGAGTAAAATTGGTGGCGGTGG
GGGAAGGAAGGAGGGGAGAAGAGAGGAGGAAAGAGTACACTGTACAGTAG
AAAGGCGTGATGCATTACTCGCACAGGCACACGACCAATATATAGCAAGC
AAGTAAATAGATCGAGCATAACGCAGAAGAGAAAAGCAAAATTGGTCCAC
GACTAAGAGAA back to topCoding sequence (CDS) from alignment at chr3:1253225..1257535+ >NO03G04350.1 ID=NO03G04350.1|Name=NO03G04350.1|organism=Nannochloropsis oceanica|type=CDS|length=3921bp|location=Sequence derived from alignment at chr3:1253225..1257535+ (Nannochloropsis oceanica)
ATGAGTTCGGCCACAAATGACGATCCAACTCGGGGCACGGCTGAGGAGGA
AGCGGAGCAGGAAGAGGAAGAGGACTCTTCGTCATCCGAAGAGGACTCCT
CCTGTACGTCATCATCAGAAGACGAGGACATAGATAGGAGCAGCGACGAT
GAGGACGACAATTCAGCCCCATCACCTCAACCACCACAACCACCTGAGGA
AGCAGAAGAGGAGATGCCCATCCTGAAATACCACCGCATGAAAGCACACG
TCCAAGCCATCAAGCAAGCCACCCCAGGCAGCGAAAATCAAATCACCGCA
CTATGCATGCATCCGCGTTGCTTGATTGTGGGTACTTTGGCGGGAAATCT
ACATTTGTTGGACTATCAGGGAAGCGGACAGGAGTTGGGACGCATCCGCG
CGGACGCGCATAAAGGACAGCGGATACGTTGTATAAGTATTGATGACAGT
GGGGAATTTGTGGTCAGTTGTTCGGATGCGGGGACGGTGGTGGTAGTATC
GCTGACATTCCTTACGTCATCCTCGCTTGGAACGACGTTCCCAGCTGCTG
GTAGTGCTTCTAGAGGAGGGGGAGGAGGAGGAGGAGAGGGAGGGGTTGCA
TCGAGTAATTTCTCCGCGTCATCTTCCTCCTCCTCCTCCTCTTCCTCCTC
CAACCCATCCCCCCCTACCGCTTCCACTGCTGATGCCAGGGGAGGGAACA
GCGGAAGCACCTTTACAAGCTCTGGCACCGCCATCACAGGCAGGAGCAGC
AGTAGTGGGAATGTAGTGGTCGGCTCCGAGCAGATATTTTGCGTGAGCCA
AGAGCCCTTATACGCCGTCCACCTCGACCCAGGGTATCGACGCAAGACCG
AGAAAGGGTTTGTATGCGGCGGGCAGGAGGGTAAATTGATTCTGACAAGA
AAAGGTTTCTTCAGTGGTAGTAAGGAGGAGTGCTTGCATGAAGGGGAGGG
GGCGATCACTGCTATTGCATGGAGGGGGGGATTGGTGGCTTGGGCAAATG
AGGAAGGAGTCAAAATTTTGGATATTGAAAATGATGAGAGGATAAGCTTT
GTAGAGCGGCCGGAGGTGGAGGGAGGGAGTGGCGGAGGGGAGGAGTTGAG
GTGCTCGTTGGTGTGGGAGAGTGAGACGGTGTTGTTGATTGGGTGGTTTG
ATACTTTCATCGTATTGCAGGTGAAACCTCGAGTGGAGGGAGGAAGGGAG
GGAGGTCTAGAGGGAGGTGCCGGACGGATGTTGAGGATGGGGGAGATTGT
GGTGAGGTGGAAGGCGGACTGTGTGATATGTGGTGTGTTTCCCTTCGACG
TGGACTCGGTGGCCATCCTGGGGTACGTGGGGTTGGTCGAGGGGGAGGAC
GATGACGAGGACGAGGCCGAAAACGAAGATGAGGACAGCATGTCTTTTGG
GAGAAGAATAGGTGATGGTGCGGGCGCAAGTCTCCCTAGAGCATCGCCAC
CACCGCCCGTACTCCCCAAATCAGAAAAAAAGGTGATATGTCGTGCGGAG
CTCCAGTTGCGGACTCGGAAAGAGGGCCGTATTTTTTCTGCGGAAATTTT
GCCTTTTGATGGGGAGGAGAGGGTGAGAGACTCGACGGGGTTTTGTCTCG
CTTCCAGCTTTGCATTGACATGCAGAAAGGTCCCAGGGCCGGGAGTGTGG
CGGTTACCCCGAGGGATGGGGAGAGGGAGGGAAGGAGGGACGCTAGGGGG
TAAAGGTAGAAGTGTCGAAGCCGGACAAGCGCAACAGGAGCGACATTTAG
CCCCCCCTCCTTCCTCCCGCTCTTCCTCGTCCTCAATCGTCGACACGGGC
GAGAGCTTTATGCCGGTGATGTTGATGGCCGCCCCTGAGGACTTGATCGT
TGCGCGGGTCCGAAACGTGGAAGATTGGATTTTGTTCGTCCTGCAACACG
GCGCTTTGGGGGCCGCCATTGAACTTGCCCTCCTCAACCGTCATTTACTC
ACTCAACAGCGGTTCCACGCCCTGGCGACTTCCTACCTGGAGCAACTCTT
GGCTCGGGGTGCTTTTGAAAGAGCAGCGGCCGAATGCCCGAGGTTGTTGG
GGGAGGAGGCAGCGTTGTGGGAACGTTGGATCTATAGCTTCGCCTCAAGG
GGAAAACTGAGTGTACTTGCTCCATTTATACCATTGCAGACCCCAAGATT
GAACCAAACTACATATGAGATGGTCTTGATGCATTTCTTGGATAACGACA
AGAGAAGCTTTTTGGAGATCATCAAGAAATGGGGGGGGCAACAGTTGAAG
TTTGGGGATGGTGCTGGAAGGGAGGGAGGGAGGGGGGGAGGGAAGGAAAA
ACTGTACGATTTACAAGAGGTGAGTAAGAGGGTGGGGGCGATGGTGGGGT
CGGCCCCGGATGAGACGTTGCTGCAAGCACAGGCCTATTTGTTTGAACTG
CAGGGGAAACATGCGGCAGCGCTGGGCGTGTACTGGGAGCTGTTCCAGGT
TGTGCAGGCGGGGGGTAAGGAGGGGAGGAGAGAGGAGGAGAGAAAGAGGT
TGTTTGCGCCTGTCTTTGGGATGATTGAGGGGCACGATCTGTTTGAGGCG
GCGGCGGCGAGGGTACTGACGCTAGTGCAGATGGATAGAGGGCAGGCTGG
GGGCTTGTTGATAAGGCATGTAGACCGTTTCCCGGTCGAGTCGGTGGTTC
GGCAGTTGCAGCAGCAACAGCAACAGGAGGACCAGCAGCAAGAGGACGGG
CAAATTCGACGGCAGCATGATTCTTCTGCTCCAGCTGCTACTGCATCGGC
GGCATCAACGGTATCGACGGTGCGGGGAAGGGCGGCTTCTAGCTCCTCCT
CATCCTCCTCCTCGTCGTTATTGCTGTGGTACTTGGATTTGCTCTTTCGA
CGGTTGCCTGATCAGTACAACCACCCAGATTACAGCCGCTATCACTTGCT
GCAGGTGGAGCTTTATGCCGCAGCCGCCCCAACCTTCCGTCCCGTCGCCG
GCAGCAGCCATATCGACACTATTGCCTCCACCACCTCTGCGAACGTAGAC
GAAGATGCCGTCGACGAAAATGATAGCAGCCTTGACCCTCCATACACCTC
AGCCTTGCTCTCTTTTCTCACCTGGAGCAATCACGTCCGGCTGGAAACGG
CCTTGGCAGCATGTGAGCGGCGCACGCCTCCTTTATACGATGAAATGGTT
TACATTTTGGGGAGGATCGGCGATACGGAAGAAGCCTTGCGTATTCTTTT
GTTCGAGATAGGGAGTGTGCGACGCGCGATTGACTTTGTCGATCGTCAGG
ATAAGGGCCTTTGGAAGGACTTAACCGAGCATTCCCTGAACCATCCTGTT
TTTCTGGCAGGGCTACTGAGGCATGCGGGGGAGTATAATGTCGACTTAGC
CCGGTCATTACTACAGCAGATCCCAGGCGAGATGAGGATCAAGGGGTTGA
AGAACAAGCTGCTGAACATAGTGGCGTCCTATCGCTTTGAACGCACGTTG
CACGAAGGAGTCCGACGCGTGGCCGAGCAGGAGTGGGTGGCTGCCACGCG
GCGTTTTCACCACGCCCACCGACGTGCAATAAGGGTGAATATTCCCGACA
CACTTTGTCAAGGGTGTTCAAACCCGCTGGTGGGTCCGGCGCCCCAAAGC
CTTCCTCTTTCCCTCCCTCCCCGGGCGTTGGCCTCGGTGGATGCCAGGGA
GCTGCATGTCTTTGCGTGCAAAGATTCTTACCACGACGTTTGTTGCTTAG
CGTTGGAGAGGCGAGGGGGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGG
AAAGGGAATGAGCGGGGGCATTTGACGTTTCAGTGTGTGAAATGTCGGGA
GGAGGCTCAATATGAATTGCGAGGGGGAGAGAGGAGGGGAGGGATAGGTG
GAAGGGGAGGAGGAGGAGGAGAAGGAGGAGGTGGAGGAGGCCGTGTTCCA
GGGCGGGGGCATGACGAGTAA back to top
|