NO03G02870.3, NO03G02870.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G02870.3
Unique Name	NO03G02870.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3233
Alignment location	chr3:866035..870275 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:866035..870275 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO03G02870.3 vs.
Match: EWM29753.1 (mediator of rna polymerase ii transcription subunit 14 [Nannochloropsis gaditana])

HSP 1 Score: 605.1 bits (1559), Expect = 3.500e-169
Identity = 363/881 (41.20%), Postives = 519/881 (58.91%), Query Frame = 0

Query:   19 FVSYPLVQAQIALDRLFYMHRDLFRKQVATRPYDLATAIDVLALGTTFGRFPRELNLSRSTAVDKDGISELELNHAIHSSLIIREKVPAQYAYARVEEGTLQLVDADNFALSLMLEYPEPASAPWRLLDIQILLSPQGGNDRHGNNFHSLKPDLEQMKQLFSLVIPILENDSVPLLSTYKLCRSFCNALRLEMLALQAKELAKGTWQGHLHVDDSSLGRLEITMWKGVYL---HAEQEFDGAAIAEVDANKNEDKKVGVKAVAEICGCILRLWLDEENGMRHLRATCSYCPASEGLLKKAEEVTFHLSVKRSHISASSLLLQAFRLLVPHRLQVVQDLLKQDAVLRSLAQRGSIQIIRLSSSLQLKVWGSHLGLDVDRKSGRFIVCAPSCSGAYPAGELGDLLREWQASLGDCSTDASFGFAIGLFHGIVRHLFLRHLEVLASTHYDLACDRRWNKLWSSNLKSNDKDKEQTGLALRAKASTFFVLNARSGLLKGERHTGLGALGEEWDFLEIELGDLGVGDPVPCAYLVMASLSRRSARVSPIRARLLLDVPIIDGATYESWLGQVLAKARESMEARLVLDAATTALDLPRVRGGCIQHVLKREWVMLELGESQGSKSTKEGRLTSLSVVRSTEHEWIWNVGLSALELSGLLPR---SDDTTFTNNDKVLRIMHRCGGVAGVLEVTFAGGWDPLVHALKLAEVVTTVAQLSWMVASFPSDTRLGIVLGGRESNMPLPLHKIPFRHTSGLAGTLCHRAFQQTSETI--QVGLNEAGRFFLSFADPLLNQVHGAWGLVEDEFCRSLNFGQLLQRIEMWANPLQTLARALQDYFPLHNFDVVPWSVASLAVTCRGSPTEGLLLLTVASPGLEHSQSGVVRLTF 892
            F+       ++ALDRLFY HRDLFRKQ+ATRPY    AID+LA G++  R  R ++LS+S     D     ELN AI SSLI+RE+VP Q   ARVE GTL L+DADNF L L LE+P P  A WRL+D Q+ L  +GG    GN F  LK +   +++L + +  +LE +  P+  TY LC SFCNAL+LE+L LQAKELAKG W GHL VD S  G L I  WKG+ L   H ++E   + +   D  +N  +K        +  C +R+ L  E+ MRHLRA CSY  AS+G ++++ E  F L + ++ +S  SLL  A  +LV +RLQVV D+LKQ+  ++ L Q+G + I    +SL L  +GS+L   VDRKSG  I+ A S S    + +L  LL EW  S+ D     S    IG+F  ++RHLFL +L +LAS  YDL CDR+        L+  + DK + G   R K+S +F+L++RS L  GE    +  +GE W +LE+E     +    P AYLVMAS SR+ A +  I+ R LLD  + +  ++E WL Q +  AR+ M+  L LD A TALD        +++ L  E + L +G++  ++S +EG+L SLSV  + + +WIWN+ L AL+    +PR    D   F + ++   + +R    A ++ + F G WDPL+  +KL +VV  VA L  M AS         V       +PLPL K+ F H+ GLA  LCH  F++  +++      ++ GRF+L+F D ++++V GAW L+E++FCR  +  +LL+R+E  A PL+TLAR L   +P  +F ++PWS+ S+A+TC+ + +  LLLLTV  P  +   SGVVRLT+
Sbjct:   76 FIGLQAHHVRVALDRLFYTHRDLFRKQMATRPYAFPAAIDILAAGSSVARVSRAIDLSQSKTWLGDRHFLRELNLAIQSSLIVRERVPPQCTCARVENGTLSLMDADNFVLRLTLEHPSP-FARWRLVDFQLQLPFKGGYGSCGNAFEVLKLEQRHIQELLAHLAHLLEGNVQPICDTYNLCHSFCNALKLEILILQAKELAKGCWTGHLEVDISRAGILNIVFWKGLDLRPNHEDKEMRLSTVNSKDVEENRFRKGNA-----MSSCCIRVGLAGEDKMRHLRARCSYQLASKGPVEQSNEELFSLLINQACVSVPSLLRNALEILVGYRLQVVYDILKQETTVKFLLQKGILIIAMHGNSLYLYFYGSYLAFGVDRKSGNIIITA-SYSRCGGSEKLEGLLHEWHTSIQDVVNPTSIESFIGVFQRVLRHLFLNYLALLASASYDLVCDRK-----CFELQDFESDK-KGGSISREKSSIYFLLDSRSALASGELAPYVTNVGESWYYLELESRGTDLRMITPHAYLVMASASRKMAPLPYIKNRYLLDDFLAEEKSHEVWLSQAVTAARKVMQTCLKLDGAATALDFACPTEISLKNFLSNEKLNLNVGKTHSTRSIEEGKLQSLSVWCTGDDDWIWNIVLPALK----VPRFSFDDKFMFKHRNEGWWLEYRNHDSAHIIRLGFRGVWDPLLLGMKLNDVVKAVAGLLSMAASL-QRAHPHFVSSDSGEVIPLPLPKLIFWHSGGLACALCHSVFERPLDSVVKHQSPHQGGRFYLAFTDSVMHRVDGAWRLIEEDFCRCRDLKKLLERVEALAYPLRTLARTL-SIWPKLDFVILPWSLNSVALTCQAASSR-LLLLTVDKPLSDSCGSGVVRLTY 936

The following BLAST results are available for this feature:

BLAST of NO03G02870.3 vs.

BLAST of NO03G02870.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29753.1	3.500e-169	41.20	mediator of rna polymerase ii transcription subuni...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G02870	NO03G02870	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO03G02870.3	NO03G02870.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO03G02870.3.cds1	NO03G02870.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G02870.3.cds2	NO03G02870.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G02870.3.cds3	NO03G02870.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G02870.3.cds4	NO03G02870.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G02870.3.cds5	NO03G02870.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G02870.3.cds6	NO03G02870.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G02870.3.cds7	NO03G02870.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G02870.3.cds8	NO03G02870.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G02870.3.cds9	NO03G02870.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G02870.3.cds10	NO03G02870.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:866035..870275+
coding sequence from alignment at chr3:866035..870275+

mRNA sequence

>NO03G02870.3 ID=NO03G02870.3|Name=NO03G02870.3|organism=Nannochloropsis oceanica|type=mRNA|length=3233bp
ACAGGCAAAATTAAGCGGGCACTGTCTCCAGTGGCCTTAGCTAAGGTTCG
CTGGCCTGCTGTAGGATGATGGTCAAGCTTGCGGACCTCCTCCACCGGGT
GCTCGACCGGGCACATGAAGAGCTGCATGCCCTGGTCACGCGGACGCTCC
CTGGCCAAGACTACGAGGACCGACGCACAGAAATAACCAAGTATGTGCAC
TACACACGGCGTGCCTTGGTTCAGCTCTTCGTCCTATTGGAATGGCTTTC
GAAGCAGAATGATGCCATGGATACGGTCATGGACGGCGCAATTTTCCTCC
AGTCTGAGGCACAACAGGTGTGTCCCACCAACGAGAGAGAAATATGGTTT
CGCTGCCACAGTGGCCAAGTTGGCGCATTTTAATTGCTCCATTTTTTTTC
GTCTCATATCCCCTCGTTCAGGCCCAGATCGCTTTGGACCGTCTTTTCTA
CATGCATCGGGACCTTTTTCGCAAGCAGGTGGCGACCCGGCCCTATGATT
TAGCCACTGCCATTGACGTCTTGGCCCTTGGCACGACGTTTGGCCGCTTT
CCCAGAGAGTTGAACTTGTCGCGATCGACGGCTGTGGACAAGGATGGAAT
TTCGGAACTTGAGTTGAATCATGCCATCCACTCCAGCCTCATAATTCGCG
AGAAAGTTCCTGCGCAGTATGCGTATGCGCGCGTAGAGGAGGGCACGTTG
CAATTGGTCGACGCTGACAACTTTGCTCTCTCGCTGATGTTGGAGTACCC
CGAACCAGCATCGGCACCCTGGCGTCTCTTGGACATCCAGATACTCCTTT
CGCCCCAGGGAGGAAATGATAGGCATGGCAACAATTTCCACTCTTTGAAG
CCGGACCTAGAGCAGATGAAGCAGCTTTTTTCCCTGGTGATACCCATCCT
GGAAAATGACTCCGTGCCGCTTCTCAGTACTTACAAGCTCTGCCGCTCGT
TCTGCAACGCCCTGAGGCTAGAGATGCTGGCGCTTCAGGCCAAAGAGCTC
GCCAAAGGCACCTGGCAAGGCCATTTACATGTGGACGATTCATCTTTGGG
CCGGCTGGAGATAACCATGTGGAAAGGTGTCTATTTGCATGCGGAGCAAG
AATTCGATGGAGCAGCAATAGCAGAAGTGGATGCGAATAAAAATGAGGAT
AAGAAAGTGGGAGTGAAGGCTGTTGCTGAGATATGTGGTTGTATTCTCCG
ACTTTGGCTTGACGAAGAGAACGGAATGCGCCATTTGCGCGCTACTTGCT
CGTATTGCCCAGCCTCTGAAGGTCTACTGAAGAAAGCCGAAGAGGTGACT
TTTCACCTGAGTGTCAAGAGATCTCATATTTCTGCGTCTTCTTTGCTGCT
GCAGGCCTTCCGCCTCCTGGTGCCTCATCGTTTACAGGTGGTGCAGGACT
TATTGAAGCAAGATGCAGTCCTGCGAAGCCTGGCTCAGAGGGGCAGTATA
CAAATTATTCGCCTTAGTTCGAGCTTGCAGCTGAAGGTCTGGGGAAGTCA
CCTGGGCCTCGATGTCGATCGCAAGTCGGGCCGTTTCATCGTGTGCGCGC
CTTCATGCAGCGGTGCCTACCCTGCAGGAGAGCTTGGGGACCTCTTGCGG
GAATGGCAGGCCTCCCTTGGGGACTGTAGCACCGATGCATCTTTCGGCTT
TGCCATTGGGCTTTTCCACGGCATTGTTCGGCACCTTTTCCTCCGACACC
TCGAAGTTTTGGCAAGCACCCACTATGACTTGGCATGCGATCGGCGATGG
AATAAGTTGTGGTCCTCCAACCTTAAGAGCAACGATAAAGACAAAGAGCA
GACCGGTTTGGCATTGCGGGCCAAGGCCTCGACTTTCTTCGTTCTGAATG
CTAGGAGCGGATTGCTGAAGGGCGAAAGACACACAGGTTTGGGCGCGCTT
GGAGAGGAGTGGGATTTCTTGGAGATTGAGTTGGGTGACCTGGGGGTAGG
AGACCCGGTCCCATGCGCATACCTGGTGATGGCCTCATTGTCTAGACGGT
CAGCTCGAGTATCGCCCATCCGCGCACGCCTCCTGCTGGATGTTCCGATC
ATCGATGGGGCTACTTATGAGTCGTGGCTTGGCCAGGTGTTGGCGAAGGC
AAGAGAGTCCATGGAAGCTCGGTTGGTGCTTGATGCAGCTACCACGGCGT
TGGACCTTCCTAGGGTAAGAGGCGGTTGCATACAGCATGTATTGAAGCGC
GAATGGGTGATGTTGGAATTGGGCGAGTCACAGGGAAGTAAAAGCACTAA
AGAAGGCAGGCTGACGAGTCTCTCAGTAGTACGCAGTACCGAGCACGAAT
GGATATGGAATGTTGGTCTTTCTGCGTTGGAGCTTTCGGGCCTCCTCCCA
CGGAGTGACGATACGACCTTCACAAATAATGATAAAGTTCTGCGGATAAT
GCACCGATGTGGCGGCGTTGCCGGCGTCCTCGAAGTCACCTTTGCAGGAG
GTTGGGATCCACTCGTCCACGCCCTGAAGCTCGCTGAAGTCGTGACCACC
GTGGCTCAGCTTTCCTGGATGGTCGCCTCGTTTCCCTCTGACACGCGCCT
CGGGATCGTGTTGGGTGGCAGGGAAAGCAACATGCCTCTACCTCTTCACA
AAATTCCTTTCCGACACACAAGCGGTCTTGCAGGCACCCTGTGCCACAGG
GCATTTCAACAGACCTCAGAGACAATACAGGTGGGCCTCAACGAGGCCGG
GCGCTTCTTCCTCTCCTTCGCAGACCCTCTTTTGAACCAGGTGCACGGAG
CATGGGGCCTCGTGGAAGATGAATTTTGCCGTTCATTGAATTTCGGGCAG
CTCCTGCAGCGAATTGAAATGTGGGCAAATCCATTGCAGACCCTGGCGAG
GGCCTTGCAGGACTATTTTCCTCTCCACAATTTCGACGTGGTGCCTTGGT
CTGTGGCTAGCCTGGCAGTCACGTGCAGGGGGTCTCCAACCGAAGGCTTG
CTTTTGCTCACGGTTGCTTCCCCTGGCTTGGAACACAGCCAATCGGGAGT
GGTAAGACTGACGTTCCAGGACATGGGAGGGGTGGTGCGAGGGGGGGGGG
CACGCGGGAGTGGGCGGCGCACGAATTCAATGCGGACGAAGTGGTCGGGA
TTGTAAGATTATGCTTTGGCATCTCGCCTCTGGAAAAATAAAAAATGTAC
AGACTGGGCGAAAGTGTGACGAAACACTCAATACATTAAGAACTATGGCA
CTGAATAAAAAGGAATGTACATATCTATGGAGA

protein sequence of NO03G02870.3

>NO03G02870.3-protein ID=NO03G02870.3-protein|Name=NO03G02870.3|organism=Nannochloropsis oceanica|type=polypeptide|length=921bp
MVSLPQWPSWRILIAPFFFVSYPLVQAQIALDRLFYMHRDLFRKQVATRP
YDLATAIDVLALGTTFGRFPRELNLSRSTAVDKDGISELELNHAIHSSLI
IREKVPAQYAYARVEEGTLQLVDADNFALSLMLEYPEPASAPWRLLDIQI
LLSPQGGNDRHGNNFHSLKPDLEQMKQLFSLVIPILENDSVPLLSTYKLC
RSFCNALRLEMLALQAKELAKGTWQGHLHVDDSSLGRLEITMWKGVYLHA
EQEFDGAAIAEVDANKNEDKKVGVKAVAEICGCILRLWLDEENGMRHLRA
TCSYCPASEGLLKKAEEVTFHLSVKRSHISASSLLLQAFRLLVPHRLQVV
QDLLKQDAVLRSLAQRGSIQIIRLSSSLQLKVWGSHLGLDVDRKSGRFIV
CAPSCSGAYPAGELGDLLREWQASLGDCSTDASFGFAIGLFHGIVRHLFL
RHLEVLASTHYDLACDRRWNKLWSSNLKSNDKDKEQTGLALRAKASTFFV
LNARSGLLKGERHTGLGALGEEWDFLEIELGDLGVGDPVPCAYLVMASLS
RRSARVSPIRARLLLDVPIIDGATYESWLGQVLAKARESMEARLVLDAAT
TALDLPRVRGGCIQHVLKREWVMLELGESQGSKSTKEGRLTSLSVVRSTE
HEWIWNVGLSALELSGLLPRSDDTTFTNNDKVLRIMHRCGGVAGVLEVTF
AGGWDPLVHALKLAEVVTTVAQLSWMVASFPSDTRLGIVLGGRESNMPLP
LHKIPFRHTSGLAGTLCHRAFQQTSETIQVGLNEAGRFFLSFADPLLNQV
HGAWGLVEDEFCRSLNFGQLLQRIEMWANPLQTLARALQDYFPLHNFDVV
PWSVASLAVTCRGSPTEGLLLLTVASPGLEHSQSGVVRLTFQDMGGVVRG
GGARGSGRRTNSMRTKWSGL*

mRNA from alignment at chr3:866035..870275+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO03G02870.3 ID=NO03G02870.3|Name=NO03G02870.3|organism=Nannochloropsis oceanica|type=mRNA|length=4241bp|location=Sequence derived from alignment at chr3:866035..870275+ (Nannochloropsis oceanica)
ACAGGCAAAATTAAGCGGGCACTGTCTCCAGTGGCCTTAGCTAAGGTTCG
CTGGCCTGCTGTAGGATGATGGTCAAGCTTGCGGACCTCCTCCACCGGGT
GCTCGACCGGGCACATGAAGAGCTGCATGCCCTGGTCACGCGGACGGTAT
GGAGAAGAGACACTCTAAGTGCACTTGGTGGGGGGAAAAGCTCTTTTCGT
TGACCGTTCCACTTCTCCGTTCCTCCACGCCTCCCTCCTCACCACAATTT
CTACAGCTCCCTGGCCAAGACTACGAGGACCGACGCACAGAAATAACCAA
GTATGTGCACTACACACGGCGTGCCTTGGTTCAGCTCTTCGTCCTATTGG
AATGGCTTTCGAAGCAGAATGATGCCATGGATACGGTCATGGACGGCGCA
ATTTTCCTCCAGTCTGAGGCACAACAGGTGTGTCCCACCAACGAGAGAGA
AATATGGTTTCGCTGCCACAGTGGCCAAGTTGGCGCATTTTAATTGCTCC
ATTTTTTTTCGTCTCATATCCCCTCGTTCAGGCCCAGATCGCTTTGGACC
GTCTTTTCTACATGCATCGGGACCTTTTTCGCAAGCAGGTGGCGACCCGG
CCCTATGATTTAGCCACTGCCATTGACGTCTTGGCCCTTGGCACGACGTT
TGGCCGCTTTCCCAGGTAAGGGGCCATTTGAAGTACTCTTGTTTTCGAGT
TAAGGGCCTTACATAGTAATCAAAATATGAAATGCTGATCTACTCTTCTT
TTTAATCGCGATACACAGAGAGTTGAACTTGTCGCGATCGACGGCTGTGG
ACAAGGATGGAATTTCGGAACTTGAGGTGCGTGTGCGTTGTACTTATCCA
AGAGGGACTGAGAGTACAGCTGGTGGTTGCACTCATCGATCATTCTTCCT
TTTTTACGTCCCGATTAGTTGAATCATGCCATCCACTCCAGCCTCATAAT
TCGCGAGAAAGTTCCTGCGCAGTATGCGTATGCGCGCGTAGAGGAGGGCA
CGTTGCAATTGGTCGACGCTGACAACTTTGCTCTCTCGCTGATGTTGGAG
TACCCCGAACCAGCATCGGCACCCTGGCGTCTCTTGGACATCCAGATACT
CCTTTCGCCCCAGGTAACACAAGCCGAGATATCTCATTTACAGGATTTGC
CTTTGTCTTACCTCCCCGTTCCTGTGTCTAATACTTCGTTTCTATCTGTG
ATCCAGGGAGGAAATGATAGGCATGGCAACAATTTCCACTCTTTGAAGCC
GGACCTAGAGCAGATGAAGCAGCTTTTTTCCCTGGTGATACCCATCCTGG
TAAGTCAGACATTTATAGGGGGAAGGACATTACCTACTCCTGTGGTTATT
CCCTCGTCGATCTCACGACAGTATTAACTCAACTTAATGAGAGGGAAGAA
GATTGTTAACTCAGATATGACGTTTCCGACTTCATGAAAGGAAAATGACT
CCGTGCCGCTTCTCAGTACTTACAAGCTCTGCCGCTCGTTCTGCAACGCC
CTGAGGCTAGAGATGCTGGCGCTTCAGGCCAAAGAGCTCGCCAAAGGTAG
GCGGGGAGGGGAGATCAATACGCGGCGGATAACGTGTGAGCTTCGTATTA
TTTCAATCCTTATCCTTTCTTGTCCTTGTCCTATCTCTTACTTGCAGGCA
CCTGGCAAGGCCATTTACATGTGGACGATTCATCTTTGGGCCGGCTGGAG
ATAACCATGTGGAAAGGTGTCTATTTGCATGCGGAGCAAGAATTCGATGG
AGCAGCAATAGCAGAAGTGGATGCGAATAAAAATGAGGATAAGAAAGTGG
GAGTGAAGGCTGTTGCTGAGATATGTGGTTGTATTCTCCGACTTTGGCTT
GACGAAGAGAACGGAATGCGCCATTTGCGCGCTACTTGCTCGTATTGCCC
AGCCTCTGAAGGTATAACTTCAACCTATCTGAGCGCTCAAGTGTCGAACT
CGCTTTCTCACGGATTTTATGGTTTCCTTATTCAAATGTCCTATCTCTCT
TAGGTCTACTGAAGAAAGCCGAAGAGGTGACTTTTCACCTGAGTGTCAAG
AGATCTCATATTTCTGCGTCTTCTTTGCTGCTGCAGGCCTTCCGCCTCCT
GGTGCCTCATCGTTTACAGGTGGTGCAGGACTTATTGAAGCAAGATGCAG
TCCTGCGAAGCCTGGCTCAGAGGGGCAGTATACAAATTATTCGCCTTAGT
TCGAGCTTGCAGCTGAAGGTCTGGGGAAGTCACCTGGGCCTCGATGTCGA
TCGCAAGTCGGGCCGTTTCATCGTGTGCGCGCCTTCATGCAGGTACCAAA
ACTCGCATTTCTTTGTCCGCGCCGTGTTGTCTGAGGGCAACATTAATGCT
ATTTCATGCTTTCCCCTCATAAATTCCCTCAGCGGTGCCTACCCTGCAGG
AGAGCTTGGGGACCTCTTGCGGGAATGGCAGGCCTCCCTTGGGGACTGTA
GCACCGATGCATCTTTCGGCTTTGCCATTGGGCTTTTCCACGGCATTGTT
CGGCACCTTTTCCTCCGACACCTCGAAGTTTTGGCAAGCACCCACTATGA
CTTGGCATGCGATCGGCGATGGAATAAGTTGTGGTCCTCCAACCTTAAGG
TAAGGGATGTAATTGGGGTTCTGGGTGTATTTGAGGGTGTTTGGACTTGG
GTGTTCCCTCGATTCTTATGTTTCCATCAATTTTCGATCCCCATCTCGCC
CCTCTCCTCCAATTGAAGAGCAACGATAAAGACAAAGAGCAGACCGGTTT
GGCATTGCGGGCCAAGGCCTCGACTTTCTTCGTTCTGAATGCTAGGAGCG
GATTGCTGAAGGGCGAAAGACACACAGGTTTGGGCGCGCTTGGAGAGGAG
TGGGATTTCTTGGAGATTGAGTTGGGTGACCTGGGGGTAGGAGACCCGGT
CCCATGCGCATACCTGGTGATGGCCTCATTGTCTAGACGGTCAGCTCGAG
TATCGCCCATCCGCGCACGCCTCCTGCTGGATGTTCCGATCATCGATGGG
GCTACTTATGAGTCGTGGCTTGGCCAGGTGTTGGCGAAGGCAAGAGAGTC
CATGGAAGCTCGGTTGGTGCTTGATGCAGCTACCACGGTACGTTAAGTAA
AGGACGAAATGGAGGAGATGACTGTAATCTCACTATTTCTCTTCCTCTAT
CCAGGCGTTGGACCTTCCTAGGGTAAGAGGCGGTTGCATACAGCATGTAT
TGAAGCGCGAATGGGTGATGTTGGAATTGGGCGAGTCACAGGGAAGTAAA
AGCACTAAAGAAGGCAGGCTGACGAGTCTCTCAGTAGTACGCAGTACCGA
GCACGAATGGATATGGAATGTTGGTCTTTCTGCGTTGGAGCTTTCGGGCC
TCCTCCCACGGAGTGACGATACGACCTTCACAAATAATGATAAAGTTCTG
CGGATAATGCACCGATGTGGCGGCGTTGCCGGCGTCCTCGAAGTCACCTT
TGCAGGAGGTTGGGATCCACTCGTCCACGCCCTGAAGCTCGCTGAAGTCG
TGACCACCGTGGCTCAGCTTTCCTGGATGGTCGCCTCGTTTCCCTCTGAC
ACGCGCCTCGGGATCGTGTTGGGTGGCAGGGAAAGCAACATGCCTCTACC
TCTTCACAAAATTCCTTTCCGACACACAAGCGGTCTTGCAGGCACCCTGT
GCCACAGGGCATTTCAACAGACCTCAGAGACAATACAGGTGGGCCTCAAC
GAGGCCGGGCGCTTCTTCCTCTCCTTCGCAGACCCTCTTTTGAACCAGGT
GCACGGAGCATGGGGCCTCGTGGAAGATGAATTTTGCCGTTCATTGAATT
TCGGGCAGCTCCTGCAGCGAATTGAAATGTGGGCAAATCCATTGCAGACC
CTGGCGAGGGCCTTGCAGGACTATTTTCCTCTCCACAATTTCGACGTGGT
GCCTTGGTCTGTGGCTAGCCTGGCAGTCACGTGCAGGGGGTCTCCAACCG
AAGGCTTGCTTTTGCTCACGGTTGCTTCCCCTGGCTTGGAACACAGCCAA
TCGGGAGTGGTAAGACTGACGTTCCAGGACATGGGAGGGGTGGTGCGAGG
GGGGGGGGCACGCGGGAGTGGGCGGCGCACGAATTCAATGCGGACGAAGT
GGTCGGGATTGTAAGATTATGCTTTGGCATCTCGCCTCTGGAAAAATAAA
AAATGTACAGACTGGGCGAAAGTGTGACGAAACACTCAATACATTAAGAA
CTATGGCACTGAATAAAAAGGAATGTACATATCTATGGAGA

Coding sequence (CDS) from alignment at chr3:866035..870275+

>NO03G02870.3 ID=NO03G02870.3|Name=NO03G02870.3|organism=Nannochloropsis oceanica|type=CDS|length=2763bp|location=Sequence derived from alignment at chr3:866035..870275+ (Nannochloropsis oceanica)
ATGGTTTCGCTGCCACAGTGGCCAAGTTGGCGCATTTTAATTGCTCCATT
TTTTTTCGTCTCATATCCCCTCGTTCAGGCCCAGATCGCTTTGGACCGTC
TTTTCTACATGCATCGGGACCTTTTTCGCAAGCAGGTGGCGACCCGGCCC
TATGATTTAGCCACTGCCATTGACGTCTTGGCCCTTGGCACGACGTTTGG
CCGCTTTCCCAGAGAGTTGAACTTGTCGCGATCGACGGCTGTGGACAAGG
ATGGAATTTCGGAACTTGAGTTGAATCATGCCATCCACTCCAGCCTCATA
ATTCGCGAGAAAGTTCCTGCGCAGTATGCGTATGCGCGCGTAGAGGAGGG
CACGTTGCAATTGGTCGACGCTGACAACTTTGCTCTCTCGCTGATGTTGG
AGTACCCCGAACCAGCATCGGCACCCTGGCGTCTCTTGGACATCCAGATA
CTCCTTTCGCCCCAGGGAGGAAATGATAGGCATGGCAACAATTTCCACTC
TTTGAAGCCGGACCTAGAGCAGATGAAGCAGCTTTTTTCCCTGGTGATAC
CCATCCTGGAAAATGACTCCGTGCCGCTTCTCAGTACTTACAAGCTCTGC
CGCTCGTTCTGCAACGCCCTGAGGCTAGAGATGCTGGCGCTTCAGGCCAA
AGAGCTCGCCAAAGGCACCTGGCAAGGCCATTTACATGTGGACGATTCAT
CTTTGGGCCGGCTGGAGATAACCATGTGGAAAGGTGTCTATTTGCATGCG
GAGCAAGAATTCGATGGAGCAGCAATAGCAGAAGTGGATGCGAATAAAAA
TGAGGATAAGAAAGTGGGAGTGAAGGCTGTTGCTGAGATATGTGGTTGTA
TTCTCCGACTTTGGCTTGACGAAGAGAACGGAATGCGCCATTTGCGCGCT
ACTTGCTCGTATTGCCCAGCCTCTGAAGGTCTACTGAAGAAAGCCGAAGA
GGTGACTTTTCACCTGAGTGTCAAGAGATCTCATATTTCTGCGTCTTCTT
TGCTGCTGCAGGCCTTCCGCCTCCTGGTGCCTCATCGTTTACAGGTGGTG
CAGGACTTATTGAAGCAAGATGCAGTCCTGCGAAGCCTGGCTCAGAGGGG
CAGTATACAAATTATTCGCCTTAGTTCGAGCTTGCAGCTGAAGGTCTGGG
GAAGTCACCTGGGCCTCGATGTCGATCGCAAGTCGGGCCGTTTCATCGTG
TGCGCGCCTTCATGCAGCGGTGCCTACCCTGCAGGAGAGCTTGGGGACCT
CTTGCGGGAATGGCAGGCCTCCCTTGGGGACTGTAGCACCGATGCATCTT
TCGGCTTTGCCATTGGGCTTTTCCACGGCATTGTTCGGCACCTTTTCCTC
CGACACCTCGAAGTTTTGGCAAGCACCCACTATGACTTGGCATGCGATCG
GCGATGGAATAAGTTGTGGTCCTCCAACCTTAAGAGCAACGATAAAGACA
AAGAGCAGACCGGTTTGGCATTGCGGGCCAAGGCCTCGACTTTCTTCGTT
CTGAATGCTAGGAGCGGATTGCTGAAGGGCGAAAGACACACAGGTTTGGG
CGCGCTTGGAGAGGAGTGGGATTTCTTGGAGATTGAGTTGGGTGACCTGG
GGGTAGGAGACCCGGTCCCATGCGCATACCTGGTGATGGCCTCATTGTCT
AGACGGTCAGCTCGAGTATCGCCCATCCGCGCACGCCTCCTGCTGGATGT
TCCGATCATCGATGGGGCTACTTATGAGTCGTGGCTTGGCCAGGTGTTGG
CGAAGGCAAGAGAGTCCATGGAAGCTCGGTTGGTGCTTGATGCAGCTACC
ACGGCGTTGGACCTTCCTAGGGTAAGAGGCGGTTGCATACAGCATGTATT
GAAGCGCGAATGGGTGATGTTGGAATTGGGCGAGTCACAGGGAAGTAAAA
GCACTAAAGAAGGCAGGCTGACGAGTCTCTCAGTAGTACGCAGTACCGAG
CACGAATGGATATGGAATGTTGGTCTTTCTGCGTTGGAGCTTTCGGGCCT
CCTCCCACGGAGTGACGATACGACCTTCACAAATAATGATAAAGTTCTGC
GGATAATGCACCGATGTGGCGGCGTTGCCGGCGTCCTCGAAGTCACCTTT
GCAGGAGGTTGGGATCCACTCGTCCACGCCCTGAAGCTCGCTGAAGTCGT
GACCACCGTGGCTCAGCTTTCCTGGATGGTCGCCTCGTTTCCCTCTGACA
CGCGCCTCGGGATCGTGTTGGGTGGCAGGGAAAGCAACATGCCTCTACCT
CTTCACAAAATTCCTTTCCGACACACAAGCGGTCTTGCAGGCACCCTGTG
CCACAGGGCATTTCAACAGACCTCAGAGACAATACAGGTGGGCCTCAACG
AGGCCGGGCGCTTCTTCCTCTCCTTCGCAGACCCTCTTTTGAACCAGGTG
CACGGAGCATGGGGCCTCGTGGAAGATGAATTTTGCCGTTCATTGAATTT
CGGGCAGCTCCTGCAGCGAATTGAAATGTGGGCAAATCCATTGCAGACCC
TGGCGAGGGCCTTGCAGGACTATTTTCCTCTCCACAATTTCGACGTGGTG
CCTTGGTCTGTGGCTAGCCTGGCAGTCACGTGCAGGGGGTCTCCAACCGA
AGGCTTGCTTTTGCTCACGGTTGCTTCCCCTGGCTTGGAACACAGCCAAT
CGGGAGTGGTAAGACTGACGTTCCAGGACATGGGAGGGGTGGTGCGAGGG
GGGGGGGCACGCGGGAGTGGGCGGCGCACGAATTCAATGCGGACGAAGTG
GTCGGGATTGTAA

Synonyms

Publications