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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr3 | genome | chr3:768160..770626 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO03G02700.2 vs.
Match: EWM29715.1 (alpha- -mannosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 412.5 bits (1059), Expect = 2.300e-111 Identity = 189/233 (81.12%), Postives = 202/233 (86.70%), Query Frame = 0
Query: 397 FHIFRDYRELDRTAWGGFVEKEFCVDVNELHALLGGTEADSSCILLHKGRAWDSLLVTMVMNGPLQPFTYTRLNGDKDTWALAAALTYHNFSTAETTPGYFMHEAQAELTLFDSAYAGWAQPVRGQVQFLRDPSAPGGVVPLYVNNQLLNMTEYPSLKDGLAFGLWEDYGYPFCGWRAVNGLLRPAPQVFDVMDSVVRALEAVGEPDECLCKSFRCRFPDPFGADSPFLPRRL 630
FHIFRDYRELDR AWG FVE E+C D++ELH LL GTEADSSC+LLHKGRAWD+LLVTM MNGPLQPFTY RLNGDKDTWALAAALTY NFS A+TTPGYFM EA+ ELTL DSAYAGWAQP+RGQVQF RDP A GGVVPLYVNNQLLNMTEYP ++ LAFGLWEDYGYPFCGWRAVN LLRP P+VF+VMD+V AL VG PDECLCK FRCRFP FG DSPFL RRL
Sbjct: 368 FHIFRDYRELDRNAWG-FVEHEYCTDMDELHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSMAQTTPGYFMREARPELTLLDSAYAGWAQPIRGQVQFRRDPEAVGGVVPLYVNNQLLNMTEYPGMRHRLAFGLWEDYGYPFCGWRAVNALLRPPPEVFNVMDAVGEALHTVGAPDECLCKWFRCRFPVAFGTDSPFLLRRL 599
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO03G02700.2 ID=NO03G02700.2|Name=NO03G02700.2|organism=Nannochloropsis oceanica|type=mRNA|length=2183bp
ACAGCGAGTGGGGCTTTTATGGCATCTATGGCGGAAGATATGCAAGGGGA
GGCAAGCTAAGGCTGGTGGTGGGTAACTTGGTCTCGTGGAATGAGGCGTG
GGCAGGTGCTTTTTTGAAAAGCAGCACACGCTAGAGGGTTGGACGAGCTC
AAATGTACACGACCAGCCTGCGCTTTCGGAAATGGCAGCACCGCATGCTG
GACTCGTTGCAGCGGACAGACATTCCCGTCTATGTCAAAGGTCACGTGAC
GGCCGCCGCGCACAGATCCAGGTCCTGGGTTTACTACGGTTCCTTGGTCC
TGACCACGGTTTACGTGGTGAGTATGCTTCATTTCTACTCGCCCTCCACT
CCCACTGCTCTCAGAAACCCCGGCTACCGAGCTTGTCGACGCGGGCCTCA
ATCCGCCGACCGCCTCGCCTTCCTACACCACGGTAATGAGACATTGCGGC
AAGGCTACGATGCGCGTAGGAGCGTCAGACGGATGCTGTTGGCCGAAGTC
AAGGATCAGGAAAGGGATTCTGGAAATAGAGAAGAGTACACGATAGGAGA
GGAGGAAGGGGGAAATGGAATGGACGTGAATGGGAACTTACTCCTGGAAT
TGCCTCCGCGGACACGTGATTTAATGAATGATGAAATTGGGAAAGTGAGG
TTGGAGAGAGAGAAACGAGAGGGAAAAAACACAAGGATACTGGCCGAGGA
GGCTGGTGCAGTGGGCGCCTCGCCTGCGAAGCCGGCCCACGAGAGCTACT
ACCATTTTCAGGGTTTGTACGTCCCAGCAGTCGATAGGCCCACCACCCGC
TTTACGCAAGGTCGAGGGATTGTGATCACGGCCTCGGGGCGGATATCAGG
GCAGGCGATCGGGGCGTACGTGACGAGTTTTATTTTGCGGAGGTTTTTGG
GTTGTCGGTTGCCCATTGAGATTTACTATGTGGGGCCCCGGGAGACATTT
GATTCGCCACTGGAGGTGAAACTGAAAGAGCTGGGAGGTCTCAAGGTCCT
GAGCCTTACCGAGGTCTTGGACGACGACGACTTCTACCAAGCCGAGCTTC
GTCACCTGCACGTGGTAGACAAACGACTTCGGAGCTACGCTGCCAAGCCG
TATGCTCTGTATGCAGCTTCTTTTGAGGAAGTCTTGCTGTTCGACGCGGG
TGTAATTCCTTTCGTAAATCCAGAGATGTTTTTTGACTTTGACAGCTATA
GAGATCATGGGTACGTTTATTTTTCTTGTACATTCGCACGGGCACCCCCT
CCTCGAACGTGTTATCACTCCGACGGAATGACAGCTACACATGTACTCAC
CCCACCTCCCTCTCTTCGCTTCGTTCCTCCCGCCCTCAGCTTCCATATAT
TCCGAGACTACCGTGAATTGGACCGCACTGCATGGGGTGGCTTCGTGGAA
AAAGAATTCTGTGTAGATGTCAATGAGCTGCACGCACTGCTGGGGGGCAC
GGAGGCAGATTCTAGTTGCATCCTACTCCACAAAGGGCGCGCATGGGACT
CCCTTTTAGTCACCATGGTAATGAACGGCCCCTTGCAGCCCTTCACCTAC
ACACGCCTCAACGGCGACAAGGATACCTGGGCCCTGGCCGCGGCTTTGAC
CTACCATAATTTTTCAACCGCCGAAACGACACCCGGATATTTCATGCATG
AAGCACAAGCAGAGCTCACCCTCTTCGACTCAGCCTACGCGGGTTGGGCG
CAGCCCGTCCGAGGACAAGTTCAATTTCTCCGTGATCCCAGCGCCCCTGG
TGGTGTGGTTCCGCTGTACGTTAACAACCAGTTGTTGAACATGACGGAGT
ACCCGAGCCTGAAGGATGGCCTGGCTTTTGGTCTGTGGGAAGATTACGGG
TACCCTTTCTGTGGATGGCGGGCTGTGAATGGCTTGCTGCGGCCAGCTCC
GCAGGTTTTTGACGTGATGGATTCTGTGGTGCGCGCTCTGGAGGCAGTCG
GAGAGCCTGATGAGTGTTTGTGTAAGTCGTTTCGATGTCGTTTCCCGGAC
CCTTTTGGTGCTGACTCTCCTTTTCTTCCTCGCCGGCTTCTGAGAAGATG
AGGAACAAGAAGAGGAGTGGTGTATATTTTAAGTTAAAATATGTAGAACG
TAGGCAGCCCAAAGTGTTGATTGACAAAACGGAAGGCGGCGTGTTATTGA
AAAGCCGGCAGAACGCAAAACAAACAACAAAGT back to topprotein sequence of NO03G02700.2 >NO03G02700.2-protein ID=NO03G02700.2-protein|Name=NO03G02700.2|organism=Nannochloropsis oceanica|type=polypeptide|length=633bp
MYTTSLRFRKWQHRMLDSLQRTDIPVYVKGHVTAAAHRSRSWVYYGSLVL
TTVYVVSMLHFYSPSTPTALRNPGYRACRRGPQSADRLAFLHHGNETLRQ
GYDARRSVRRMLLAEVKDQERDSGNREEYTIGEEEGGNGMDVNGNLLLEL
PPRTRDLMNDEIGKVRLEREKREGKNTRILAEEAGAVGASPAKPAHESYY
HFQGLYVPAVDRPTTRFTQGRGIVITASGRISGQAIGAYVTSFILRRFLG
CRLPIEIYYVGPRETFDSPLEVKLKELGGLKVLSLTEVLDDDDFYQAELR
HLHVVDKRLRSYAAKPYALYAASFEEVLLFDAGVIPFVNPEMFFDFDSYR
DHGYVYFSCTFARAPPPRTCYHSDGMTATHVLTPPPSLRFVPPALSFHIF
RDYRELDRTAWGGFVEKEFCVDVNELHALLGGTEADSSCILLHKGRAWDS
LLVTMVMNGPLQPFTYTRLNGDKDTWALAAALTYHNFSTAETTPGYFMHE
AQAELTLFDSAYAGWAQPVRGQVQFLRDPSAPGGVVPLYVNNQLLNMTEY
PSLKDGLAFGLWEDYGYPFCGWRAVNGLLRPAPQVFDVMDSVVRALEAVG
EPDECLCKSFRCRFPDPFGADSPFLPRRLLRR* back to topmRNA from alignment at chr3:768160..770626+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO03G02700.2 ID=NO03G02700.2|Name=NO03G02700.2|organism=Nannochloropsis oceanica|type=mRNA|length=2467bp|location=Sequence derived from alignment at chr3:768160..770626+ (Nannochloropsis oceanica)
ACAGCGAGTGGGGCTTTTATGGCATCTATGGCGGAAGATATGCAAGGGGA
GGCAAGCTAAGGCTGGTGGTGGGTAACTTGGTCTCGTGGAATGAGGCGTG
GGCAGGTGCTTTTTTGAAAAGCAGCACACGCTAGAGGGTTGGACGAGCTC
AAATGTACACGACCAGCCTGCGCTTTCGGAAATGGCAGCACCGCATGCTG
GACTCGTTGCAGCGGACAGACATTCCCGTCTATGTCAAAGGTCACGTGAC
GGCCGCCGCGCACAGATCCAGGTCCTGGGTTTACTACGGTGAGTGTCTTA
CTCACGCTAATTCTGTGTCCCGACCCCGGGGATGCATGCATATGCCATAT
CCCTTCCCTCGGCCACATGCCCGCATGTTCACGTTTCTTACCCTTTGTTC
AACATTTTCTCCGTAGGTTCCTTGGTCCTGACCACGGTTTACGTGGTGAG
TATGCTTCATTTCTACTCGCCCTCCACTCCCACTGCTCTCAGAAACCCCG
GCTACCGAGCTTGTCGACGCGGGCCTCAATCCGCCGACCGCCTCGCCTTC
CTACACCACGGTAATGAGACATTGCGGCAAGGCTACGATGCGCGTAGGAG
CGTCAGACGGATGCTGTTGGCCGAAGTCAAGGATCAGGAAAGGGATTCTG
GAAATAGAGAAGAGTACACGATAGGAGAGGAGGAAGGGGGAAATGGAATG
GACGTGAATGGGAACTTACTCCTGGAATTGCCTCCGCGGACACGTGATTT
AATGAATGATGAAATTGGGAAAGTGAGGTTGGAGAGAGAGAAACGAGAGG
GAAAAAACACAAGGATACTGGCCGAGGAGGCTGGTGCAGTGGGCGCCTCG
CCTGCGAAGCCGGCCCACGAGAGCTACTACCATTTTCAGGGTTTGTACGT
CCCAGCAGTCGATAGGCCCACCACCCGCTTTACGCAAGGTCGAGGGATTG
TGATCACGGCCTCGGGGCGGATATCAGGGCAGGCGATCGGGGCGTACGTG
ACGAGTTTTATTTTGCGGAGGTTTTTGGGTTGTCGGTTGCCCATTGAGAT
TTACTATGTGGGGCCCCGGGAGACATTTGATTCGCCACTGGAGGTGAAAC
TGAAAGAGCTGGGAGGTCTCAAGGTAAGGATGTGACGCAAATAGAGAAGG
AGATAAGCATGTGACGCGCTTCTGCTTAGAGGCTTGCAAGTGAGCAAATG
TGAGCATTGAAGAGAAAGGCGGACTAAACAAGCACCCTCCTATACTGCCT
CTTCTCTCGTTCATGCCCTCACACCTTAGGTCCTGAGCCTTACCGAGGTC
TTGGACGACGACGACTTCTACCAAGCCGAGCTTCGTCACCTGCACGTGGT
AGACAAACGACTTCGGAGCTACGCTGCCAAGCCGTATGCTCTGTATGCAG
CTTCTTTTGAGGAAGTCTTGCTGTTCGACGCGGGTGTAATTCCTTTCGTA
AATCCAGAGATGTTTTTTGACTTTGACAGCTATAGAGATCATGGGTACGT
TTATTTTTCTTGTACATTCGCACGGGCACCCCCTCCTCGAACGTGTTATC
ACTCCGACGGAATGACAGCTACACATGTACTCACCCCACCTCCCTCTCTT
CGCTTCGTTCCTCCCGCCCTCAGCTTCCATATATTCCGAGACTACCGTGA
ATTGGACCGCACTGCATGGGGTGGCTTCGTGGAAAAAGAATTCTGTGTAG
ATGTCAATGAGCTGCACGCACTGCTGGGGGGCACGGAGGCAGATTCTAGT
TGCATCCTACTCCACAAAGGGCGCGCATGGGACTCCCTTTTAGTCACCAT
GGTAATGAACGGCCCCTTGCAGCCCTTCACCTACACACGCCTCAACGGCG
ACAAGGATACCTGGGCCCTGGCCGCGGCTTTGACCTACCATAATTTTTCA
ACCGCCGAAACGACACCCGGATATTTCATGCATGAAGCACAAGCAGAGCT
CACCCTCTTCGACTCAGCCTACGCGGGTTGGGCGCAGCCCGTCCGAGGAC
AAGTTCAATTTCTCCGTGATCCCAGCGCCCCTGGTGGTGTGGTTCCGCTG
TACGTTAACAACCAGTTGTTGAACATGACGGAGTACCCGAGCCTGAAGGA
TGGCCTGGCTTTTGGTCTGTGGGAAGATTACGGGTACCCTTTCTGTGGAT
GGCGGGCTGTGAATGGCTTGCTGCGGCCAGCTCCGCAGGTTTTTGACGTG
ATGGATTCTGTGGTGCGCGCTCTGGAGGCAGTCGGAGAGCCTGATGAGTG
TTTGTGTAAGTCGTTTCGATGTCGTTTCCCGGACCCTTTTGGTGCTGACT
CTCCTTTTCTTCCTCGCCGGCTTCTGAGAAGATGAGGAACAAGAAGAGGA
GTGGTGTATATTTTAAGTTAAAATATGTAGAACGTAGGCAGCCCAAAGTG
TTGATTGACAAAACGGAAGGCGGCGTGTTATTGAAAAGCCGGCAGAACGC
AAAACAAACAACAAAGT back to topCoding sequence (CDS) from alignment at chr3:768160..770626+ >NO03G02700.2 ID=NO03G02700.2|Name=NO03G02700.2|organism=Nannochloropsis oceanica|type=CDS|length=1899bp|location=Sequence derived from alignment at chr3:768160..770626+ (Nannochloropsis oceanica)
ATGTACACGACCAGCCTGCGCTTTCGGAAATGGCAGCACCGCATGCTGGA
CTCGTTGCAGCGGACAGACATTCCCGTCTATGTCAAAGGTCACGTGACGG
CCGCCGCGCACAGATCCAGGTCCTGGGTTTACTACGGTTCCTTGGTCCTG
ACCACGGTTTACGTGGTGAGTATGCTTCATTTCTACTCGCCCTCCACTCC
CACTGCTCTCAGAAACCCCGGCTACCGAGCTTGTCGACGCGGGCCTCAAT
CCGCCGACCGCCTCGCCTTCCTACACCACGGTAATGAGACATTGCGGCAA
GGCTACGATGCGCGTAGGAGCGTCAGACGGATGCTGTTGGCCGAAGTCAA
GGATCAGGAAAGGGATTCTGGAAATAGAGAAGAGTACACGATAGGAGAGG
AGGAAGGGGGAAATGGAATGGACGTGAATGGGAACTTACTCCTGGAATTG
CCTCCGCGGACACGTGATTTAATGAATGATGAAATTGGGAAAGTGAGGTT
GGAGAGAGAGAAACGAGAGGGAAAAAACACAAGGATACTGGCCGAGGAGG
CTGGTGCAGTGGGCGCCTCGCCTGCGAAGCCGGCCCACGAGAGCTACTAC
CATTTTCAGGGTTTGTACGTCCCAGCAGTCGATAGGCCCACCACCCGCTT
TACGCAAGGTCGAGGGATTGTGATCACGGCCTCGGGGCGGATATCAGGGC
AGGCGATCGGGGCGTACGTGACGAGTTTTATTTTGCGGAGGTTTTTGGGT
TGTCGGTTGCCCATTGAGATTTACTATGTGGGGCCCCGGGAGACATTTGA
TTCGCCACTGGAGGTGAAACTGAAAGAGCTGGGAGGTCTCAAGGTCCTGA
GCCTTACCGAGGTCTTGGACGACGACGACTTCTACCAAGCCGAGCTTCGT
CACCTGCACGTGGTAGACAAACGACTTCGGAGCTACGCTGCCAAGCCGTA
TGCTCTGTATGCAGCTTCTTTTGAGGAAGTCTTGCTGTTCGACGCGGGTG
TAATTCCTTTCGTAAATCCAGAGATGTTTTTTGACTTTGACAGCTATAGA
GATCATGGGTACGTTTATTTTTCTTGTACATTCGCACGGGCACCCCCTCC
TCGAACGTGTTATCACTCCGACGGAATGACAGCTACACATGTACTCACCC
CACCTCCCTCTCTTCGCTTCGTTCCTCCCGCCCTCAGCTTCCATATATTC
CGAGACTACCGTGAATTGGACCGCACTGCATGGGGTGGCTTCGTGGAAAA
AGAATTCTGTGTAGATGTCAATGAGCTGCACGCACTGCTGGGGGGCACGG
AGGCAGATTCTAGTTGCATCCTACTCCACAAAGGGCGCGCATGGGACTCC
CTTTTAGTCACCATGGTAATGAACGGCCCCTTGCAGCCCTTCACCTACAC
ACGCCTCAACGGCGACAAGGATACCTGGGCCCTGGCCGCGGCTTTGACCT
ACCATAATTTTTCAACCGCCGAAACGACACCCGGATATTTCATGCATGAA
GCACAAGCAGAGCTCACCCTCTTCGACTCAGCCTACGCGGGTTGGGCGCA
GCCCGTCCGAGGACAAGTTCAATTTCTCCGTGATCCCAGCGCCCCTGGTG
GTGTGGTTCCGCTGTACGTTAACAACCAGTTGTTGAACATGACGGAGTAC
CCGAGCCTGAAGGATGGCCTGGCTTTTGGTCTGTGGGAAGATTACGGGTA
CCCTTTCTGTGGATGGCGGGCTGTGAATGGCTTGCTGCGGCCAGCTCCGC
AGGTTTTTGACGTGATGGATTCTGTGGTGCGCGCTCTGGAGGCAGTCGGA
GAGCCTGATGAGTGTTTGTGTAAGTCGTTTCGATGTCGTTTCCCGGACCC
TTTTGGTGCTGACTCTCCTTTTCTTCCTCGCCGGCTTCTGAGAAGATGA back to top
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