|
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr3 | genome | chr3:441430..445515 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO03G01440.2 vs.
Match: ATB53142.1 (diacylglycerol acyltransferase [Nannochloropsis oceanica strain IMET1]) HSP 1 Score: 516.2 bits (1328), Expect = 6.900e-143 Identity = 257/294 (87.41%), Postives = 263/294 (89.46%), Query Frame = 0
Query: 8 MVDLSCHARAELYVSVSVPP--PSLIPLPLSLSFPPLF----SLSQGGAAMYVENSFKGRNVNGPIMLAMHPHGIMPHSFLLNGAGRIHAQKPEVFLPPHYQDMSLKSTGVAEPLLFRIPFISAFLYFFGCAEPASKEMMHDILGRQVPFGILVGGSEEILLMEYQKENIYILERKGFIKYALQHGYTIAIGYLFGESNLYHTITWGRKTRLALFKKFKIPLFLAWGRWFFPLLPERAAPLNAVVGNPIDLPRIANPSQADIDKYHALYIEKLTDLFERNKAAFGYSDRTLNFF 296
M L H + + S+ P P L+P+P F +GGAAMYVENSFKGRNVNGPIMLAMHPHGIMPHSFLLNGAGRIHAQKPEVFLPPHYQDMSLKSTGVAEPLLFRIPFISAFLYFFGCAEPASKEMMHDILGRQVPFG LVGGSEEILLMEYQKENIYILERKGFIKYALQHGYTIAIGYLFGESNLYHTITWGRKTRLALFKKFKIPLFLAWGRWFFPLLPERAAPLNAVVGNPIDLPRIANPSQADIDKYHALYIEKLTDLFERNKAAFGYSDRTLNFF
Sbjct: 101 MTWLFWHGYKKTFYSILGPLLYPLLLPVPAWPGFVRFILNMAGYFEGGAAMYVENSFKGRNVNGPIMLAMHPHGIMPHSFLLNGAGRIHAQKPEVFLPPHYQDMSLKSTGVAEPLLFRIPFISAFLYFFGCAEPASKEMMHDILGRQVPFGTLVGGSEEILLMEYQKENIYILERKGFIKYALQHGYTIAIGYLFGESNLYHTITWGRKTRLALFKKFKIPLFLAWGRWFFPLLPERAAPLNAVVGNPIDLPRIANPSQADIDKYHALYIEKLTDLFERNKAAFGYSDRTLNFF 394
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO03G01440.2 ID=NO03G01440.2|Name=NO03G01440.2|organism=Nannochloropsis oceanica|type=mRNA|length=3952bp TCTGCAGTTTGTTTTTCGTTTCGTGACAGGGTGAGACTTGTCTGCCATTC AACATGTTGTTGCTTTGACTATGAACTGAAGGCGAACGGGCAACGCCTCC AAGTACTCCGTCACTTCCTCGCACGCTTATTCTGCTCTGAGTCCACGCAT GGAACAAAAGAAAAGAGAAAGTAATTATATGATTGTCACCGACAACAACG CATGGAAGAAAGACAAATTAACTCAACAGCATGTGCCGCCGTTTTTTTCG CAGTCGTTTCTTTCCCCACTCTCTTCCTCCTTCCCCTGCAGCCTCATTGA GAATACTGTAGACAACCCCTCTCGCTTTCTCGATCCCTTTCAATCACCAC CACAACCACCACATATACCACACATACACCAAGACACAACTTACAATCAC ACCACCACTACCCTATCCCTATCCCATCCTTCTTCCCCTCTACGGAAAGA AATCCGCAATCGAAGACACGTAATAATCAGGATGGATTTTATTCGCCGCA CCCAGCAACTTCTCTTCCGAGGTAACCCCACTCAGGGTCAATACCGTCTT CAGTCCATTATCCTTCCCGAACAGAATATCCGTGTCCAATCGATCCCCGA CCATGCAAATCTTTGCCTTGGGAATCTCGTACTTATAGACGATGTAATCA ATCATTAACGGACTAGGCTTCCCAACCAACGTGGGCTCCTTCCCCGTACA ACCCTTGATGCACCCCACCATCGATCCTGCGCCAGCCCACTCCTGCGCAT CCGTCAAATGAGTTACTGCGTCCATATTCGTGGCGATGAACTCCGCCCCA TTCTCATTAATGCATAGCTGGGCATACTGAATCTTGTGGTAATTAAAGTG ACGATCAAAACCCACCACCACCGCGCCCACATCATGGTCGATCTCCAAAG CATACCCAGGAGTCAACTCAATCGTCTTGCCTTTATCTGCAGGCCCACCG ATGTGTGGCACGCCGATCAAATCCAGCTCCTCCCCAATTCCGACCTCGCC TATGACGTAGACCTTCTTCCCCGTCGCCTTGAAATTCTTCTGCTCCAAGT ATGCGGCCGCCGCAAATGAAGACGAGAAAATTTCCTCATCTTTAACGCCC AGTCCCAGCGAAGAAAACTTGCTCTTGTAGCCCTTGCGGCTCTTGGTGGA GTTGTTGGTCACGAAAAACATGCGCTTCCCCATGGCCCGGAGCTTCTCCA GGACCGAGGGCACCTTGTCGATCAAGGAGTCTCCACGCCAAATCACGCCG TCGCAGTCAAAGATAAACACATCAATGTCCTTAAGCAATTCGTCTTGCGG AGAGCTCAAGCGCTTGACTGATGCCGCGCCAGGTGGAGCGACAGTGGCCA TCATGGAGACGCGCCCGCGGCGGGCAGCAGCAGCGTTGGCCATGGCCAGG GGGTTGGTGGCAGCGCGCATGAGGCGCGGCACGGAGAAGGCCGAGGCCAA GGCAGGAAGAAGCAGCATCATTAAGCCCAGCGTGCTGCGCATGATTCAAG GGCTGTGGCGTGGGATAGATGGGGAATGAGTCGGGAGAGTGAGAACACAA ACCAGGCGAGATGGACCACATCTCCTCGAGAGACGGCCCGTGTGGCGAGC CTGCGGGATTGATTGCGGCAGGGAACAACGGCCCCAACCGACGCAGCCCA AAAATCCCTATGAGCTTGTCAACAACAAGGCAGCGAGCCAGCAGAGGACG GTGCACATGCAAATTCTCGCAACAAAGGCACACTTGCATGCATTTGTGCT CGTGTCCAAGCCCGCAAAATCGCCAAACGTCGTCGCGGCGCGGCCCGCGG GACTTCCATTTCGCCCAGCACATGCTTCCGCTTTCATTCTGCTGTGGTGT GTTTCTGCGTGCGACTGTTGCCCTTGCTACTTATTTTAACCCCATACTCC TGCCCTTACGCCTCGACAGACCTCTGGCACATGTGCCTGGCGAAAATACT GAGGCTGGACTTCGTGGGGCTCCCTGTGCTTCCGCCACCACCGCCGCCCT CTTCGTCAACGCCCGCTCTTAAAGAGACTCACTATTGAAGAATTACAACC GCATTACAACCCTACCCAAAGCCAACACCCACAGGTACCATCAGTAGCCA CTGCAGCAATAATAGCACCACCGCGACCAACATGGGTCTATTTGGCAGTG GGATCATCGAGCAGCAAGAGCAGGCGAAGCTGAAGCAGAAACCGTCTCCG CTGCGGGAGCTCAAGGGAGGCAATAAAAGCAGCAAGCACAAGGAACCCCT GACGCCCTCCAGTAATCTGAGGCCGGCCCGCTCCCCGACCGAGGTAGACT GGAGCTCTTTTCCCGAGGGCAGCTACACGCGCTTCGGGCATGGCGGGGAT TGGTGGACGCTGATCAAGGGGACGATAGCCATTTTGTTCACGTGGGGAAC CTGGCTGGCCGGCGGCTTGTCTCCCGTTTGGATGACTTGGTTGTTTTGGC ACGGATACAAAAAGACGTTTTATTCGATCTTGGGCCCTTTGCTCTATCCG CTTTTGTTGCCAGTGCCGGCCTGGCCTGGATTCGTCCGATTCATTCTAAA CATGGCTGGGTATTTTGAGGTATGCGACGGTGTTTGTTAGAATTGATGCT GTGTGATGAAGCAAGATGAGTAGGGGTGAAGGATGAAAGGGAGTTGAAAA GACTATATGCCTTTTTTGAATGGGCAGGGTGATGATTGTGATGGTAGACC TGTCGTGTCATGCCCGTGCGGAACTTTATGTGAGTGTCTCCGTGCCTCCT CCTTCTCTCATCCCCCTTCCCTTGTCCCTTTCTTTTCCTCCTCTTTTCTC ACTGTCACAGGGCGGTGCAGCGATGTACGTTGAAAACTCCTTCAAAGGCC GCAACGTGAACGGCCCTATCATGTTGGCCATGCATCCCCACGGCATCATG CCTCACTCTTTCCTTCTCAACGGTGCCGGGCGGATCCACGCGCAGAAACC AGAGGTATTCCTCCCTCCACACTATCAAGATATGTCTCTCAAATCGACGG GCGTAGCGGAGCCTTTGTTGTTTCGGATTCCGTTTATCTCGGCGTTTCTA TACTTTTTCGGATGTGCCGAACCAGCGTCAAAGGAGATGATGCACGACAT CTTGGGGAGGCAGGTGCCGTTTGGGATTCTGGTTGGTGGCTCAGAAGAAA TTCTCCTCATGGAGTACCAGAAGGAAAACATCTACATCCTGGAACGCAAA GGCTTCATCAAATACGCCCTCCAACACGGCTACACCATTGCTATTGGCTA TCTGTTCGGGGAATCCAACCTCTACCACACCATCACCTGGGGCCGCAAGA CCCGCCTCGCTCTCTTCAAAAAATTCAAGATCCCCCTCTTCTTGGCTTGG GGGCGTTGGTTCTTCCCCTTACTTCCTGAGCGAGCCGCGCCTTTGAATGC TGTCGTAGGTAACCCGATAGATTTGCCCAGGATAGCTAACCCAAGCCAGG CCGACATTGACAAATACCATGCGTTGTATATTGAGAAGTTGACAGACTTG TTCGAACGGAATAAGGCGGCCTTCGGGTATTCTGATCGGACGTTGAATTT CTTTTAGGGAGGGGGGGAGGGAGTGATGTCGAGAAGAATAAAAGGAAGGT GTGTGTAGGGGATGAGTGTTCCGGCATTGTTTTGGCTGGAGGCATGGAAA GTAAGATGGAAAGAGACGCTGTAGTGGCATACCGAACGTGAGATCGACAC GCATGTTCGTCAGGTCGTCAATGCCCATCGAAAGGAAGAAAGGGGAGAGG GAGGGAAAGATCGAGCTGGTGTACAAAAAGATGCATGACTGAGTGAAGAG GCGGAAGAGAGCAGCAGCAGAGACTTAGAACGATGATTCTCATAGCAGCT GCTACAAGAGCAACCACATAACCACCTAAAGCAAAAAATCCAAAAACAGA AAGATTTGACACGGAGAACGAGAACGAAGAAAGTTGGCACCGTAGCTCCG CA back to topprotein sequence of NO03G01440.2 >NO03G01440.2-protein ID=NO03G01440.2-protein|Name=NO03G01440.2|organism=Nannochloropsis oceanica|type=polypeptide|length=296bp MGRVMIVMVDLSCHARAELYVSVSVPPPSLIPLPLSLSFPPLFSLSQGGA AMYVENSFKGRNVNGPIMLAMHPHGIMPHSFLLNGAGRIHAQKPEVFLPP HYQDMSLKSTGVAEPLLFRIPFISAFLYFFGCAEPASKEMMHDILGRQVP FGILVGGSEEILLMEYQKENIYILERKGFIKYALQHGYTIAIGYLFGESN LYHTITWGRKTRLALFKKFKIPLFLAWGRWFFPLLPERAAPLNAVVGNPI DLPRIANPSQADIDKYHALYIEKLTDLFERNKAAFGYSDRTLNFF* back to topmRNA from alignment at chr3:441430..445515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO03G01440.2 ID=NO03G01440.2|Name=NO03G01440.2|organism=Nannochloropsis oceanica|type=mRNA|length=4086bp|location=Sequence derived from alignment at chr3:441430..445515- (Nannochloropsis oceanica) TCTGCAGTTTGTTTTTCGTTTCGTGACAGGGTGAGACTTGTCTGCCATTC
AACATGTTGTTGCTTTGACTATGAACTGAAGGCGAACGGGCAACGCCTCC
AAGTACTCCGTCACTTCCTCGCACGCTTATTCTGCTCTGAGTCCACGCAT
GGAACAAAAGAAAAGAGAAAGTAATTATATGATTGTCACCGACAACAACG
CATGGAAGAAAGACAAATTAACTCAACAGCATGTGCCGCCGTTTTTTTCG
CAGTCGTTTCTTTCCCCACTCTCTTCCTCCTTCCCCTGCAGCCTCATTGA
GAATACTGTAGACAACCCCTCTCGCTTTCTCGATCCCTTTCAATCACCAC
CACAACCACCACATATACCACACATACACCAAGACACAACTTACAATCAC
ACCACCACTACCCTATCCCTATCCCATCCTTCTTCCCCTCTACGGAAAGA
AATCCGCAATCGAAGACACGTAATAATCAGGATGGATTTTATTCGCCGCA
CCCAGCAACTTCTCTTCCGAGGTAACCCCACTCAGGGTCAATACCGTCTT
CAGTCCATTATCCTTCCCGAACAGAATATCCGTGTCCAATCGATCCCCGA
CCATGCAAATCTTTGCCTTGGGAATCTCGTACTTATAGACGATGTAATCA
ATCATTAACGGACTAGGCTTCCCAACCAACGTGGGCTCCTTCCCCGTACA
ACCCTTGATGCACCCCACCATCGATCCTGCGCCAGCCCACTCCTGCGCAT
CCGTCAAATGAGTTACTGCGTCCATATTCGTGGCGATGAACTCCGCCCCA
TTCTCATTAATGCATAGCTGGGCATACTGAATCTTGTGGTAATTAAAGTG
ACGATCAAAACCCACCACCACCGCGCCCACATCATGGTCGATCTCCAAAG
CATACCCAGGAGTCAACTCAATCGTCTTGCCTTTATCTGCAGGCCCACCG
ATGTGTGGCACGCCGATCAAATCCAGCTCCTCCCCAATTCCGACCTCGCC
TATGACGTAGACCTTCTTCCCCGTCGCCTTGAAATTCTTCTGCTCCAAGT
ATGCGGCCGCCGCAAATGAAGACGAGAAAATTTCCTCATCTTTAACGCCC
AGTCCCAGCGAAGAAAACTTGCTCTTGTAGCCCTTGCGGCTCTTGGTGGA
GTTGTTGGTCACGAAAAACATGCGCTTCCCCATGGCCCGGAGCTTCTCCA
GGACCGAGGGCACCTTGTCGATCAAGGAGTCTCCACGCCAAATCACGCCG
TCGCAGTCAAAGATAAACACATCAATGTCCTTAAGCAATTCGTCTTGCGG
AGAGCTCAAGCGCTTGACTGATGCCGCGCCAGGTGGAGCGACAGTGGCCA
TCATGGAGACGCGCCCGCGGCGGGCAGCAGCAGCGTTGGCCATGGCCAGG
GGGTTGGTGGCAGCGCGCATGAGGCGCGGCACGGAGAAGGCCGAGGCCAA
GGCAGGAAGAAGCAGCATCATTAAGCCCAGCGTGCTGCGCATGATTCAAG
GGCTGTGGCGTGGGATAGATGGGGAATGAGTCGGGAGAGTGAGAACACAA
ACCAGGCGAGATGGACCACATCTCCTCGAGAGACGGCCCGTGTGGCGAGC
CTGCGGGATTGATTGCGGCAGGGAACAACGGCCCCAACCGACGCAGCCCA
AAAATCCCTATGAGCTTGTCAACAACAAGGCAGCGAGCCAGCAGAGGACG
GTGCACATGCAAATTCTCGCAACAAAGGCACACTTGCATGCATTTGTGCT
CGTGTCCAAGCCCGCAAAATCGCCAAACGTCGTCGCGGCGCGGCCCGCGG
GACTTCCATTTCGCCCAGCACATGCTTCCGCTTTCATTCTGCTGTGGTGT
GTTTCTGCGTGCGACTGTTGCCCTTGCTACTTATTTTAACCCCATACTCC
TGCCCTTACGCCTCGACAGACCTCTGGCACATGTGCCTGGCGAAAATACT
GAGGCTGGACTTCGTGGGGCTCCCTGTGCTTCCGCCACCACCGCCGCCCT
CTTCGTCAACGCCCGCTCTTAAAGAGACTCACTATTGAAGAATTACAACC
GCATTACAACCCTACCCAAAGCCAACACCCACAGGTACCATCAGTAGCCA
CTGCAGCAATAATAGCACCACCGCGACCAACATGGGTCTATTTGGCAGTG
GGATCATCGAGCAGCAAGAGCAGGCGAAGCTGAAGCAGAAACCGTCTCCG
CTGCGGGAGCTCAAGGGAGGCAATAAAAGCAGCAAGCACAAGGAACCCCT
GACGCCCTCCAGTAATCTGAGGCCGGCCCGCTCCCCGACCGAGGTAGACT
GGAGCTCTTTTCCCGAGGGCAGCTACACGCGCTTCGGGCATGGCGGGGAT
TGGTGGACGCTGATCAAGGGGACGATAGCCATTTTGTTCACGTGGGGAAC
CTGGCTGGCCGGCGGCTTGTCTCCCGTTTGGATGACTTGGTTGTTTTGGC
ACGGATACAAAAAGACGTTTTATTCGATCTTGGGCCCTTTGCTCTATCCG
CTTTTGTTGCCAGTGCCGGCCTGGCCTGGATTCGTCCGATTCATTCTAAA
CATGGCTGGGTATTTTGAGGTATGCGACGGTGTTTGTTAGAATTGATGCT
GTGTGATGAAGCAAGATGAGTAGGGGTGAAGGATGAAAGGGAGTTGAAAA
GACTATATGCCTTTTTTGAATGGGCAGGGTGATGATTGTGATGGTAGACC
TGTCGTGTCATGCCCGTGCGGAACTTTATGTGAGTGTCTCCGTGCCTCCT
CCTTCTCTCATCCCCCTTCCCTTGTCCCTTTCTTTTCCTCCTCTTTTCTC
ACTGTCACAGGGCGGTGCAGCGATGTACGTTGAAAACTCCTTCAAAGGCC
GCAACGTGAACGGCCCTATCATGTTGGCCATGCATCCCCACGGCATCATG
CCTCACTCTTTCCTTCTCAACGGTGCCGGGCGGATCCACGCGCAGAAACC
AGAGGTATTCCTCCCTCCACACTATCAAGATATGTCTCTCAAATCGACGG
GCGTAGCGGAGCCTTTGTTGTTTCGGATTCCGTTTATCTCGGCGTTTCTA
TACTTTTTCGGATGTGCCGAACCAGCGTCAAAGGAGATGATGCACGACAT
CTTGGGGAGGCAGGTGCCGTTTGGGATTCTGGTACGTGCCTAGAAAAGCA
TGTGTTGTGAGAGGAAGATGGGGAATAAGTTAAGGCTTAGGCGGGCCGTT
TCTTCTTAAGTGTCACGCCTTATTCGCCGCCTTTTCCCTTTCCCCTGCCC
CTCCTCCCCTCCCAGGTTGGTGGCTCAGAAGAAATTCTCCTCATGGAGTA
CCAGAAGGAAAACATCTACATCCTGGAACGCAAAGGCTTCATCAAATACG
CCCTCCAACACGGCTACACCATTGCTATTGGCTATCTGTTCGGGGAATCC
AACCTCTACCACACCATCACCTGGGGCCGCAAGACCCGCCTCGCTCTCTT
CAAAAAATTCAAGATCCCCCTCTTCTTGGCTTGGGGGCGTTGGTTCTTCC
CCTTACTTCCTGAGCGAGCCGCGCCTTTGAATGCTGTCGTAGGTAACCCG
ATAGATTTGCCCAGGATAGCTAACCCAAGCCAGGCCGACATTGACAAATA
CCATGCGTTGTATATTGAGAAGTTGACAGACTTGTTCGAACGGAATAAGG
CGGCCTTCGGGTATTCTGATCGGACGTTGAATTTCTTTTAGGGAGGGGGG
GAGGGAGTGATGTCGAGAAGAATAAAAGGAAGGTGTGTGTAGGGGATGAG
TGTTCCGGCATTGTTTTGGCTGGAGGCATGGAAAGTAAGATGGAAAGAGA
CGCTGTAGTGGCATACCGAACGTGAGATCGACACGCATGTTCGTCAGGTC
GTCAATGCCCATCGAAAGGAAGAAAGGGGAGAGGGAGGGAAAGATCGAGC
TGGTGTACAAAAAGATGCATGACTGAGTGAAGAGGCGGAAGAGAGCAGCA
GCAGAGACTTAGAACGATGATTCTCATAGCAGCTGCTACAAGAGCAACCA
CATAACCACCTAAAGCAAAAAATCCAAAAACAGAAAGATTTGACACGGAG
AACGAGAACGAAGAAAGTTGGCACCGTAGCTCCGCA back to topCoding sequence (CDS) from alignment at chr3:441430..445515- >NO03G01440.2 ID=NO03G01440.2|Name=NO03G01440.2|organism=Nannochloropsis oceanica|type=CDS|length=888bp|location=Sequence derived from alignment at chr3:441430..445515- (Nannochloropsis oceanica) ATGGGCAGGGTGATGATTGTGATGGTAGACCTGTCGTGTCATGCCCGTGC GGAACTTTATGTGAGTGTCTCCGTGCCTCCTCCTTCTCTCATCCCCCTTC CCTTGTCCCTTTCTTTTCCTCCTCTTTTCTCACTGTCACAGGGCGGTGCA GCGATGTACGTTGAAAACTCCTTCAAAGGCCGCAACGTGAACGGCCCTAT CATGTTGGCCATGCATCCCCACGGCATCATGCCTCACTCTTTCCTTCTCA ACGGTGCCGGGCGGATCCACGCGCAGAAACCAGAGGTATTCCTCCCTCCA CACTATCAAGATATGTCTCTCAAATCGACGGGCGTAGCGGAGCCTTTGTT GTTTCGGATTCCGTTTATCTCGGCGTTTCTATACTTTTTCGGATGTGCCG AACCAGCGTCAAAGGAGATGATGCACGACATCTTGGGGAGGCAGGTGCCG TTTGGGATTCTGGTTGGTGGCTCAGAAGAAATTCTCCTCATGGAGTACCA GAAGGAAAACATCTACATCCTGGAACGCAAAGGCTTCATCAAATACGCCC TCCAACACGGCTACACCATTGCTATTGGCTATCTGTTCGGGGAATCCAAC CTCTACCACACCATCACCTGGGGCCGCAAGACCCGCCTCGCTCTCTTCAA AAAATTCAAGATCCCCCTCTTCTTGGCTTGGGGGCGTTGGTTCTTCCCCT TACTTCCTGAGCGAGCCGCGCCTTTGAATGCTGTCGTAGGTAACCCGATA GATTTGCCCAGGATAGCTAACCCAAGCCAGGCCGACATTGACAAATACCA TGCGTTGTATATTGAGAAGTTGACAGACTTGTTCGAACGGAATAAGGCGG CCTTCGGGTATTCTGATCGGACGTTGAATTTCTTTTAG back to top
|