NO02G04820.3, NO02G04820.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G04820.3
Unique Name	NO02G04820.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5024
Alignment location	chr2:1303865..1309286 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:1303865..1309286 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G04820.3 vs.
Match: EWM30182.1 (zinc finger protein [Nannochloropsis gaditana])

HSP 1 Score: 1111.7 bits (2874), Expect = 0.000e+0
Identity = 586/804 (72.89%), Postives = 629/804 (78.23%), Query Frame = 0

Query:    1 MSLIHSPLSCYYKCSAALADCPLVEIVHFHDCLRGEVKLFAAGTAKLRAIVGSRGVFSQEVIDLEAQLHAQFLSLRRVFQAHSKAEDDLIWPALREKAWRDGVARESLECALEEDHSDEEYIFAEIEGLLALFEKGCNPPPPLLSPSSSSSPAISTATTAASAATAAAATAAVASLPNV--AETTREALRLLSELEGLAIRASENMISHLQREETEVLPLIQRCFSREEMARLVGTILGERPGDLMDTILAMMFRNLTPESRADMLRHVKHAVDGTFFDRWLSYVRLAHQGSAAAFLDEAAGGDESTLERESKVAEEKNARTGAVGGGGGGMGGGEGGGGKTEVGCFMACGRDSEEGGEDQVHTADGICASPHNGR-TCTNTHHHHHERGKPRPGCRMCGWVGRCPRESKLEPQEFEAAVRAIARDNSLGMTDKSKAVQTLRSCSWQQKRPRPGRTITAGTVGHIHPPPPPSSSSSTSGTSSSSSSSAMRPSSLSAIPAANITSNSSSNSNTISSQLKAPSVAMPLPPPHRPPSAVKEAHDRSPSHTPTGELGCKHYRRACKLRAACCGRLYPCRLCHDEAAGDHAMDRYAVTEICCMHCGELQPPARACRNQGCRQIFSAYYCDICRLYDDAAGKAIYHCPYCNVCRLGKGLGIDFRHCMTCNACVSLNVAPEKHKCIEQALQRDCPVCSEPLFTSTTHYKVLSLCGHSMHRQCYEAYRQTAYTCPICKKSMEDMTSHFAGLDLLLQTYPMPIEFATWRSDVLCQDCGEESHDIPYHFLYHKCTRGCGSYNTRVLQAGDRGGG 802
            M+ + S +  +    AALADCPLVEIVHFHDCLRGEV+LFAAGTAKLRAIV  RGV S+E IDLEA+LHAQFLSLRRVFQAHSKAEDDLIWPALREKAWRDGVARESLECALEEDHSDEEYIFAEIEGLL+L EK   P   +       SP++                      P++  AE T E LR++S+LEGLA+RASENMI HLQREETEVLPLIQRCFSREEMARLVG ILGERPGDLMDTILAMMFRNLTPE+RADMLRHVKHAVDGTFFDRWLSYVRLAHQ SA AF+DE  G   S+  R+ +VAE K+A  G  G      GG E G G      FMAC  + EE GE +    +G       G+ T      H H RG+PRPGCRMCGWVGRCPRESKLEPQEFEAAVRAIARD S+GM +KSKAVQTLR+  WQQKR RPG T+TAGT G IHPPPPPS  +ST+ T+  S S  M        P A   S SS       S L AP+VA PLPPPHRPPSA  EA DRSPS+TPTGE GC HYRRACKLRA CCGRLYPCRLCHD+A  DHAMDRYAV EICCM CGELQPPAR CRN  CR +FSAYYCDICRLYDD  GKAIYHCPYCNVCRLGKGLGIDFRHCMTCNACVSL V PE+HKCIEQALQRDCPVCSEPLFTSTTHYKVLS CGHSMHRQCY+AYRQTAYTCPICKKSMEDM+SHFAGLDLLLQ YPMP EFATWRSDVLCQDCGEES +IPYHFLYHKC  GCGSYNTRVLQAGDRG G
Sbjct:   43 MAEVSSSVRSHEAHRAALADCPLVEIVHFHDCLRGEVQLFAAGTAKLRAIVSGRGVLSKEAIDLEARLHAQFLSLRRVFQAHSKAEDDLIWPALREKAWRDGVARESLECALEEDHSDEEYIFAEIEGLLSLLEKKMQPTLAIRPGRKPRSPSLRYWVPCFEFRCCGGTGGGSEPCPSLPAAEATPEVLRVVSDLEGLAVRASENMIRHLQREETEVLPLIQRCFSREEMARLVGAILGERPGDLMDTILAMMFRNLTPEARADMLRHVKHAVDGTFFDRWLSYVRLAHQASATAFVDETMGERGSSTGRQGQVAEGKDAGVGVEGE----RGGRETGNG------FMACEHEEEEEGEGE----EGTGVKGGGGQVTGGGRSSHSHPRGRPRPGCRMCGWVGRCPRESKLEPQEFEAAVRAIARDKSIGMIEKSKAVQTLRAAPWQQKRARPGPTVTAGTAGRIHPPPPPSFLASTTSTTFPSPSHHMVNHETPHAPGAKDHSGSSP------SALAAPAVAAPLPPPHRPPSADTEALDRSPSYTPTGEFGCMHYRRACKLRAPCCGRLYPCRLCHDQALTDHAMDRYAVAEICCMRCGELQPPARTCRNPHCRHVFSAYYCDICRLYDDDVGKAIYHCPYCNVCRLGKGLGIDFRHCMTCNACVSLAVPPERHKCIEQALQRDCPVCSEPLFTSTTHYKVLS-CGHSMHRQCYDAYRQTAYTCPICKKSMEDMSSHFAGLDLLLQAYPMPPEFATWRSDVLCQDCGEESRNIPYHFLYHKCANGCGSYNTRVLQAGDRGNG 825

The following BLAST results are available for this feature:

BLAST of NO02G04820.3 vs.

BLAST of NO02G04820.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30182.1	0.000e+0	72.89	zinc finger protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G04820	NO02G04820	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G04820.3	NO02G04820.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G04820.3.cds1	NO02G04820.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G04820.3.cds2	NO02G04820.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G04820.3.cds3	NO02G04820.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:1303865..1309286-
coding sequence from alignment at chr2:1303865..1309286-

mRNA sequence

>NO02G04820.3 ID=NO02G04820.3|Name=NO02G04820.3|organism=Nannochloropsis oceanica|type=mRNA|length=5024bp
TCGCAATACAAGCTCATTGTTAAGCCTTATTTTTCTCGTTCCCATATGCT
CACCCTTTCTCTTCCTCCCCTCCCTCCTCCTCCTCCTCCTCCTCCTCAAA
CTCTGCACTCATATAAATACCCACCGGATCCCGCCACACCTCATTCTTTA
ACACTTCCCCCATTTCCAGATCGCGGTCCTCGGCATGAAAAATCGAAAAG
AACGAGGGCTCCACGTCCTTCGGCATGGGGTCTTGCGCCATCAACGTGGT
GACCAACGTGGCTTTCAAATCCTTTGCTCCCACCGTATCTTTCCAGTCTA
TCTCAGAGGATGTAACGGTAGCCTCATGGTCTCGAAAGCGATATTCCTTC
CACAACACTGCGTTCGTAAAGTACACGTTCGGCGAGAAATGGAAGTCGAC
CCGGTAATCAGGCATCGTTACTGTCCCTCCTGCTCCCACGGCTGCTTCCT
CATTCGCATCCTTCTTCACGTCTACCACCTCTAGTTTGGTGAGGTGGCGG
AGAGCTCCTTGGTCCAGGTCGGTTATGTGCTCGCCCGTTGAGGGATGCAC
AAGCAAGACGCGGAACCAGAACTCAGGCACCTAAGGGAAGAGTGCAAGCT
TGAGCATTGAGGACGTTTTTCTTTTTTCGCTTTTTGATTCATTTATCAAC
TTGTTTACTAACTAAGTTGATTATTCATTTATTTGAACCTTCTTAATCTC
TTTAAATTCCCATGCATACATACCTGTTCTATCTCCTTTTGTCGGCGCGC
ATACACGGGCAGTTTTTGCTCGTTATACTTCTTGATTATCTGTAAAATCC
CTTCTGCCTGTGCTGTTTCCAACGCAGCCAGTTCTGTTTGTACGGCATAA
ATTGCTTTGATGCCATCTTCTTCCGCTTCGTCCGCTGCATTTGAGGAATT
TCTACAGGTTTCTGCGGGGACTTGAACGCTACTGTCCTCACCGTCCATGT
CCGTGCGTGGGGCCTAAATTATTTGAAAGGATGAGTGCACAGCCATAGAT
AGTTGACAGCATCGTGGAAAATAGTTCCTTGTAAAACAAATGATCTAGGC
TATTTTGATCGAAGCTGCGCTGCGGTTAGGTGGGGTTATAGCAGCAGATG
CGGCGCGGAGCCACGAGGCTGGAGAGGATTGGAGAGGACAGCTCTAGCGC
GAGCTCACGGGAAAATAATAGAGACGCATCATGCATCAACATCGATGTGA
CAATCTTAATGTATGCCTGCAGCAAGAAGATGTATATTCCGCTGCCACAG
AACACTGCATGCCCTTCACTACCACTATCCTCTTCGAACCCCACACCCCA
ACAAGCCTTGGCCTTCCCATCCCCAGCCTCTCACCTTTCTCTTCATCAAA
TCACTCAGGTTGACGGTCCCGCGCTTTGTTACCATAATTGTCAAAGATCA
GTCTGTGAAGGCGGAGTGGTGGATTGGTGCGAATAAGAAGCAAAAGAGTT
GCGTTCCTTCTTGACCTCCCGGCTCCAACATGCAGAGAAGACTCTTATCC
GCTGCCCACCGAGCCAAGGCACGCGTTGAATTTGACCGGGCACTTGTCTT
GAGCGTGCCTGATACGTCACCACCTGGACCAGAAAAGAGTATGCGTGCAT
GATACGTCACTATCTGGACAAGGACGTAGTGTACTAGCCCTTGTTTCAAA
AGGCCCTATTTCCCCGACAAAACATAGATGGCACCTACAAATTTTCGTGA
CCCAAGCCCCACCACAACCCCGCTCTATTTCCTTCGTCTGCCGCTTCCAC
ACGGACCGCACCACCACTAATTTGCCTACTTCTTCTCCTATAACACTATC
AGGTCATGGCAGAGGTAGAGGCGGCAGCTCGCAGCCACGAGGCACATCGG
TACGTGCGAGAGGATACGTATGGGGGTCGGGGGAAAAGCATGCATATCCT
AACAGAGGAGGCTGGGGCCTACACCAATCCGAGGCACAGGCTTGACACAT
AACATTAACAATAAAAACCGTTGTGGAGCGAGGTATACGGCCAGGGCAGG
GCCCGTCTGCATTCCCGCCGTGCTATCACCCGCGCTGGGAGAAAGCTTAA
GATGCTTGGATTCACACTCCTGTGTCGAGCCCAGGAGGAATGCTTGGGAT
GCCCCATTCCCACATATGTCACTCATACACTCTCCCTTATCATGTTACTA
CAAATGCAGCGCGGCGTTGGCAGATTGTCCTTTGGTGGAGATTGTGCATT
TCCACGACTGCCTGCGGGGGGAAGTCAAACTCTTTGCGGCGGGCACCGCC
AAGCTCAGAGCAATCGTCGGCAGCCGCGGGGTCTTCTCACAAGAAGTTAT
CGATCTCGAGGCCCAACTCCATGCACAGTTCCTCTCCCTTCGACGCGTCT
TCCAAGCGCACAGCAAGGCCGAGGACGACCTCATCTGGCCCGCCCTCCGT
GAAAAGGCCTGGCGAGACGGCGTTGCTCGGGAGTCCCTGGAATGTGCTTT
GGAAGAGGATCATTCCGATGAGGAATACATATTTGCCGAGATTGAGGGTT
TGTTGGCCTTGTTTGAGAAAGGGTGCAATCCTCCACCACCGCTGCTCTCG
CCATCCTCTTCTTCTTCACCAGCAATATCTACAGCAACAACAGCAGCATC
AGCGGCAACAGCAGCAGCAGCAACGGCAGCAGTAGCATCCCTCCCCAACG
TGGCCGAAACCACCCGCGAAGCTCTCCGCCTGCTTTCGGAGCTCGAAGGG
CTGGCAATCCGGGCGTCGGAGAATATGATCAGTCACTTGCAGCGAGAGGA
GACTGAGGTCTTGCCGTTGATTCAACGGTGTTTTTCCCGGGAGGAGATGG
CGCGATTGGTGGGGACCATCCTGGGAGAGAGGCCGGGGGATCTGATGGAC
ACGATTTTGGCAATGATGTTCCGCAATCTGACCCCTGAATCGAGGGCTGA
CATGCTGCGGCACGTCAAGCACGCAGTGGACGGGACGTTTTTTGATCGAT
GGTTAAGCTATGTCCGGCTGGCGCACCAGGGATCAGCTGCTGCTTTTCTG
GACGAGGCGGCAGGAGGGGATGAGAGCACCCTGGAGAGGGAGAGCAAGGT
GGCTGAAGAGAAGAATGCGAGGACGGGTGCAGTTGGGGGGGGAGGAGGAG
GAATGGGAGGAGGAGAAGGGGGAGGGGGGAAGACGGAGGTGGGGTGTTTC
ATGGCTTGTGGTCGTGACAGCGAGGAAGGGGGGGAGGATCAGGTGCACAC
CGCGGATGGAATTTGTGCGTCTCCCCACAATGGCCGTACGTGTACCAACA
CGCATCACCACCACCATGAACGGGGAAAGCCTCGCCCTGGCTGTCGTATG
TGCGGTTGGGTGGGCCGATGTCCCCGCGAGTCGAAATTAGAACCCCAAGA
ATTCGAAGCGGCCGTTCGCGCAATTGCGAGAGACAACAGCTTGGGGATGA
CGGACAAGAGTAAAGCGGTGCAAACCCTTCGGTCATGTTCTTGGCAGCAG
AAAAGGCCCAGGCCAGGGCGAACCATCACGGCAGGTACGGTTGGCCATAT
CCATCCCCCTCCACCTCCCTCATCCTCGTCCTCCACCTCGGGCACTTCCT
CCTCTTCTTCCTCGTCGGCAATGCGCCCTTCCTCCCTCTCCGCCATCCCC
GCTGCCAACATCACCAGCAATAGCAGCAGCAACAGCAACACAATCTCCTC
GCAACTCAAGGCGCCAAGCGTGGCCATGCCCCTCCCTCCCCCTCACCGCC
CTCCCTCCGCCGTCAAAGAGGCCCACGATCGCTCCCCATCCCACACCCCC
ACGGGTGAACTCGGTTGCAAGCACTACCGCCGCGCCTGCAAACTCCGCGC
AGCCTGCTGTGGCCGTCTTTATCCTTGTCGTCTTTGTCACGACGAGGCGG
CGGGAGACCACGCGATGGATCGCTATGCAGTGACGGAAATTTGTTGCATG
CATTGTGGTGAGCTCCAGCCGCCAGCAAGGGCATGTAGGAATCAGGGGTG
TCGGCAGATTTTCAGCGCCTACTATTGCGACATCTGTAGGTTGTATGATG
ATGCGGCGGGAAAAGCCATATACCACTGTCCCTACTGCAATGTGTGCCGA
CTTGGGAAGGGTCTTGGGATTGACTTCCGGCACTGCATGACATGCAATGC
GTGTGTATCTCTCAACGTAGCCCCAGAGAAGCATAAGTGCATCGAGCAGG
CGCTGCAGAGAGACTGTCCAGTGTGTTCCGAGCCATTGTTCACGAGCACG
ACGCACTATAAAGTCTTATCGTTGTGTGGGCATTCCATGCATCGGCAGTG
CTATGAGGCCTATCGACAGACGGCTTACACGTGCCCGATCTGCAAGAAGT
CCATGGAGGATATGACGAGTCATTTTGCAGGGCTTGACCTACTCTTGCAG
ACCTACCCTATGCCGATTGAGTTTGCCACGTGGCGCTCGGATGTGTTATG
TCAGGACTGTGGGGAGGAGAGTCATGATATTCCCTACCATTTTTTGTACC
ATAAGTGCACGCGTGGATGTGGGAGCTATAATACTCGGGTATTGCAGGCG
GGCGATCGAGGAGGTGGGGCAGGGGGGATTGGAGGGGGAGTTGGAGGTGA
AGGAGGAAATGGGGAGTCGTCGTGAGAGGCAGAAGAGGAGGACAGGAGGA
CATATATTTTTGTTTAGGACTGGTGTACGAGTCAGAAGGGAAAAAATCAA
GAAGCGCGGAAGGAGAAGGAAAAGTATGAGGATGACGGAGCGCAAATACA
ACAGTGTATATACGACGTATAAAATGAAGTTGGATTTCTTACCTTCTATA
TATATGCGTCTACTTGCATGTCCAAATAGTTTTTTTTGTGTCTGACGGTT
TGCAGCTTGAGCAATAGCACCAAAGTGAGCGAAAAGGGCTCGGTGTAAGA
GAAAGTGTGCTGCTTGGCACTAACCGACACACCCAGCCCACGATGCATCC
CTAGCAAAACAAAAAACTTAAGAACCACATAGGGGAAACCCCAAAAGAGA
AAGAGACGATCAACAAATAAGAATTTTAAACTGCAGTGCTCCATTATTTT
TGTCATCACGCCGTTTGAAGTAAG

protein sequence of NO02G04820.3

>NO02G04820.3-protein ID=NO02G04820.3-protein|Name=NO02G04820.3|organism=Nannochloropsis oceanica|type=polypeptide|length=820bp
MSLIHSPLSCYYKCSAALADCPLVEIVHFHDCLRGEVKLFAAGTAKLRAI
VGSRGVFSQEVIDLEAQLHAQFLSLRRVFQAHSKAEDDLIWPALREKAWR
DGVARESLECALEEDHSDEEYIFAEIEGLLALFEKGCNPPPPLLSPSSSS
SPAISTATTAASAATAAAATAAVASLPNVAETTREALRLLSELEGLAIRA
SENMISHLQREETEVLPLIQRCFSREEMARLVGTILGERPGDLMDTILAM
MFRNLTPESRADMLRHVKHAVDGTFFDRWLSYVRLAHQGSAAAFLDEAAG
GDESTLERESKVAEEKNARTGAVGGGGGGMGGGEGGGGKTEVGCFMACGR
DSEEGGEDQVHTADGICASPHNGRTCTNTHHHHHERGKPRPGCRMCGWVG
RCPRESKLEPQEFEAAVRAIARDNSLGMTDKSKAVQTLRSCSWQQKRPRP
GRTITAGTVGHIHPPPPPSSSSSTSGTSSSSSSSAMRPSSLSAIPAANIT
SNSSSNSNTISSQLKAPSVAMPLPPPHRPPSAVKEAHDRSPSHTPTGELG
CKHYRRACKLRAACCGRLYPCRLCHDEAAGDHAMDRYAVTEICCMHCGEL
QPPARACRNQGCRQIFSAYYCDICRLYDDAAGKAIYHCPYCNVCRLGKGL
GIDFRHCMTCNACVSLNVAPEKHKCIEQALQRDCPVCSEPLFTSTTHYKV
LSLCGHSMHRQCYEAYRQTAYTCPICKKSMEDMTSHFAGLDLLLQTYPMP
IEFATWRSDVLCQDCGEESHDIPYHFLYHKCTRGCGSYNTRVLQAGDRGG
GAGGIGGGVGGEGGNGESS*

mRNA from alignment at chr2:1303865..1309286-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G04820.3 ID=NO02G04820.3|Name=NO02G04820.3|organism=Nannochloropsis oceanica|type=mRNA|length=5422bp|location=Sequence derived from alignment at chr2:1303865..1309286- (Nannochloropsis oceanica)
TCGCAATACAAGCTCATTGTTAAGCCTTATTTTTCTCGTTCCCATATGCT
CACCCTTTCTCTTCCTCCCCTCCCTCCTCCTCCTCCTCCTCCTCCTCAAA
CTCTGCACTCATATAAATACCCACCGGATCCCGCCACACCTCATTCTTTA
ACACTTCCCCCATTTCCAGATCGCGGTCCTCGGCATGAAAAATCGAAAAG
AACGAGGGCTCCACGTCCTTCGGCATGGGGTCTTGCGCCATCAACGTGGT
GACCAACGTGGCTTTCAAATCCTTTGCTCCCACCGTATCTTTCCAGTCTA
TCTCAGAGGATGTAACGGTAGCCTCATGGTCTCGAAAGCGATATTCCTTC
CACAACACTGCGTTCGTAAAGTACACGTTCGGCGAGAAATGGAAGTCGAC
CCGGTAATCAGGCATCGTTACTGTCCCTCCTGCTCCCACGGCTGCTTCCT
CATTCGCATCCTTCTTCACGTCTACCACCTCTAGTTTGGTGAGGTGGCGG
AGAGCTCCTTGGTCCAGGTCGGTTATGTGCTCGCCCGTTGAGGGATGCAC
AAGCAAGACGCGGAACCAGAACTCAGGCACCTAAGGGAAGAGTGCAAGCT
TGAGCATTGAGGACGTTTTTCTTTTTTCGCTTTTTGATTCATTTATCAAC
TTGTTTACTAACTAAGTTGATTATTCATTTATTTGAACCTTCTTAATCTC
TTTAAATTCCCATGCATACATACCTGTTCTATCTCCTTTTGTCGGCGCGC
ATACACGGGCAGTTTTTGCTCGTTATACTTCTTGATTATCTGTAAAATCC
CTTCTGCCTGTGCTGTTTCCAACGCAGCCAGTTCTGTTTGTACGGCATAA
ATTGCTTTGATGCCATCTTCTTCCGCTTCGTCCGCTGCATTTGAGGAATT
TCTACAGGTTTCTGCGGGGACTTGAACGCTACTGTCCTCACCGTCCATGT
CCGTGCGTGGGGCCTAAATTATTTGAAAGGATGAGTGCACAGCCATAGAT
AGTTGACAGCATCGTGGAAAATAGTTCCTTGTAAAACAAATGATCTAGGC
TATTTTGATCGAAGCTGCGCTGCGGTTAGGTGGGGTTATAGCAGCAGATG
CGGCGCGGAGCCACGAGGCTGGAGAGGATTGGAGAGGACAGCTCTAGCGC
GAGCTCACGGGAAAATAATAGAGACGCATCATGCATCAACATCGATGTGA
CAATCTTAATGTATGCCTGCAGCAAGAAGATGTATATTCCGCTGCCACAG
AACACTGCATGCCCTTCACTACCACTATCCTCTTCGAACCCCACACCCCA
ACAAGCCTTGGCCTTCCCATCCCCAGCCTCTCACCTTTCTCTTCATCAAA
TCACTCAGGTTGACGGTCCCGCGCTTTGTTACCATAATTGTCAAAGATCA
GTCTGTGAAGGCGGAGTGGTGGATTGGTGCGAATAAGAAGCAAAAGAGTT
GCGTTCCTTCTTGACCTCCCGGCTCCAACATGCAGAGAAGACTCTTATCC
GCTGCCCACCGAGCCAAGGCACGCGTTGAATTTGACCGGGCACTTGTCTT
GAGCGTGCCTGATACGTCACCACCTGGACCAGAAAAGAGTATGCGTGCAT
GATACGTCACTATCTGGACAAGGACGTAGTGTACTAGCCCTTGTTTCAAA
AGGCCCTATTTCCCCGACAAAACATAGATGGCACCTACAAATTTTCGTGA
CCCAAGCCCCACCACAACCCCGCTCTATTTCCTTCGTCTGCCGCTTCCAC
ACGGACCGCACCACCACTAATTTGCCTACTTCTTCTCCTATAACACTATC
AGGTCATGGCAGAGGTAGAGGCGGCAGCTCGCAGCCACGAGGCACATCGG
TACGTGCGAGAGGATACGTATGGGGGTCGGGGGAAAAGCATGCATATCCT
AACAGAGGAGGCTGGGGCCTACACCAATCCGAGGCACAGGCTTGACACAT
AACATTAACAATAAAAACCGTTGTGGAGCGAGGTATACGGCCAGGGCAGG
GCCCGTCTGCATTCCCGCCGTGCTATCACCCGCGCTGGGAGAAAGCTTAA
GATGCTTGGATTCACACTCCTGTGTCGAGCCCAGGAGGAATGCTTGGGAT
GCCCCATTCCCACATATGTCACTCATACACTCTCCCTTATCATGTTACTA
CAAATGCAGCGCGGCGTTGGCAGATTGTCCTTTGGTGGAGATTGTGCATT
TCCACGACTGCCTGCGGGGGGAAGTCAAACTCTTTGCGGCGGGCACCGCC
AAGCTCAGGTGAGCTTTTGGACAGAGAAAGAGAGGACGACATGCATGGAG
AGCGAATGGGCACGGAGAATAGAAAAGAGGCATTTTGGTCTTAGGAAGGA
CTCAAGGAAGTCTATATAGAGTGCTGAATAATTTGTCAGGCATGTCTCAT
TCCTCCTCTTAACGACCAACAGAGCAATCGTCGGCAGCCGCGGGGTCTTC
TCACAAGAAGTTATCGATCTCGAGGCCCAACTCCATGCACAGTTCCTCTC
CCTTCGACGCGTCTTCCAAGCGCACAGCAAGGCCGAGGACGACCTCATCT
GGCCCGCCCTCCGTGAAAAGGCCTGGCGAGACGGCGTTGCTCGGGAGTCC
CTGGAATGTGCTTTGGAAGAGGATCATTCCGATGAGGAATACATATTTGC
CGAGATTGAGGGTTTGTTGGCCTTGTTTGAGAAAGGGTGCAATCCTCCAC
CACCGCTGCTCTCGCCATCCTCTTCTTCTTCACCAGCAATATCTACAGCA
ACAACAGCAGCATCAGCGGCAACAGCAGCAGCAGCAACGGCAGCAGTAGC
ATCCCTCCCCAACGTGGCCGAAACCACCCGCGAAGCTCTCCGCCTGCTTT
CGGAGCTCGAAGGGCTGGCAATCCGGGCGTCGGAGAATATGATCAGTCAC
TTGCAGCGAGAGGAGACTGAGGTCTTGCCGTTGATTCAACGGTGTTTTTC
CCGGGAGGAGATGGCGCGATTGGTGGGGACCATCCTGGGAGAGAGGCCGG
GGGATCTGATGGACACGATTTTGGCAATGATGTTCCGCAATCTGACCCCT
GAATGTGCGTATATTAGCTTCCCTTTGGGCCCTAATGTGCCCATATTGGC
TTCCCTTTGACCCTTGAATGTTCTCATATTAGCCTCCTTCATTCCGCCTT
TCTTTCCTTTCTTTGTCACACCTCTTCCTCCCTCTCGCCCTCCTTTCCTC
TTTCTTTCGGCATTATTGGTTTATTAAGTTCGTGTTGAGGTCACCATAGC
TTCCTTCCCTTCCTCCCCACTTCCCCTCCTCTCCACAGCGAGGGCTGACA
TGCTGCGGCACGTCAAGCACGCAGTGGACGGGACGTTTTTTGATCGATGG
TTAAGCTATGTCCGGCTGGCGCACCAGGGATCAGCTGCTGCTTTTCTGGA
CGAGGCGGCAGGAGGGGATGAGAGCACCCTGGAGAGGGAGAGCAAGGTGG
CTGAAGAGAAGAATGCGAGGACGGGTGCAGTTGGGGGGGGAGGAGGAGGA
ATGGGAGGAGGAGAAGGGGGAGGGGGGAAGACGGAGGTGGGGTGTTTCAT
GGCTTGTGGTCGTGACAGCGAGGAAGGGGGGGAGGATCAGGTGCACACCG
CGGATGGAATTTGTGCGTCTCCCCACAATGGCCGTACGTGTACCAACACG
CATCACCACCACCATGAACGGGGAAAGCCTCGCCCTGGCTGTCGTATGTG
CGGTTGGGTGGGCCGATGTCCCCGCGAGTCGAAATTAGAACCCCAAGAAT
TCGAAGCGGCCGTTCGCGCAATTGCGAGAGACAACAGCTTGGGGATGACG
GACAAGAGTAAAGCGGTGCAAACCCTTCGGTCATGTTCTTGGCAGCAGAA
AAGGCCCAGGCCAGGGCGAACCATCACGGCAGGTACGGTTGGCCATATCC
ATCCCCCTCCACCTCCCTCATCCTCGTCCTCCACCTCGGGCACTTCCTCC
TCTTCTTCCTCGTCGGCAATGCGCCCTTCCTCCCTCTCCGCCATCCCCGC
TGCCAACATCACCAGCAATAGCAGCAGCAACAGCAACACAATCTCCTCGC
AACTCAAGGCGCCAAGCGTGGCCATGCCCCTCCCTCCCCCTCACCGCCCT
CCCTCCGCCGTCAAAGAGGCCCACGATCGCTCCCCATCCCACACCCCCAC
GGGTGAACTCGGTTGCAAGCACTACCGCCGCGCCTGCAAACTCCGCGCAG
CCTGCTGTGGCCGTCTTTATCCTTGTCGTCTTTGTCACGACGAGGCGGCG
GGAGACCACGCGATGGATCGCTATGCAGTGACGGAAATTTGTTGCATGCA
TTGTGGTGAGCTCCAGCCGCCAGCAAGGGCATGTAGGAATCAGGGGTGTC
GGCAGATTTTCAGCGCCTACTATTGCGACATCTGTAGGTTGTATGATGAT
GCGGCGGGAAAAGCCATATACCACTGTCCCTACTGCAATGTGTGCCGACT
TGGGAAGGGTCTTGGGATTGACTTCCGGCACTGCATGACATGCAATGCGT
GTGTATCTCTCAACGTAGCCCCAGAGAAGCATAAGTGCATCGAGCAGGCG
CTGCAGAGAGACTGTCCAGTGTGTTCCGAGCCATTGTTCACGAGCACGAC
GCACTATAAAGTCTTATCGTTGTGTGGGCATTCCATGCATCGGCAGTGCT
ATGAGGCCTATCGACAGACGGCTTACACGTGCCCGATCTGCAAGAAGTCC
ATGGAGGATATGACGAGTCATTTTGCAGGGCTTGACCTACTCTTGCAGAC
CTACCCTATGCCGATTGAGTTTGCCACGTGGCGCTCGGATGTGTTATGTC
AGGACTGTGGGGAGGAGAGTCATGATATTCCCTACCATTTTTTGTACCAT
AAGTGCACGCGTGGATGTGGGAGCTATAATACTCGGGTATTGCAGGCGGG
CGATCGAGGAGGTGGGGCAGGGGGGATTGGAGGGGGAGTTGGAGGTGAAG
GAGGAAATGGGGAGTCGTCGTGAGAGGCAGAAGAGGAGGACAGGAGGACA
TATATTTTTGTTTAGGACTGGTGTACGAGTCAGAAGGGAAAAAATCAAGA
AGCGCGGAAGGAGAAGGAAAAGTATGAGGATGACGGAGCGCAAATACAAC
AGTGTATATACGACGTATAAAATGAAGTTGGATTTCTTACCTTCTATATA
TATGCGTCTACTTGCATGTCCAAATAGTTTTTTTTGTGTCTGACGGTTTG
CAGCTTGAGCAATAGCACCAAAGTGAGCGAAAAGGGCTCGGTGTAAGAGA
AAGTGTGCTGCTTGGCACTAACCGACACACCCAGCCCACGATGCATCCCT
AGCAAAACAAAAAACTTAAGAACCACATAGGGGAAACCCCAAAAGAGAAA
GAGACGATCAACAAATAAGAATTTTAAACTGCAGTGCTCCATTATTTTTG
TCATCACGCCGTTTGAAGTAAG

Coding sequence (CDS) from alignment at chr2:1303865..1309286-

>NO02G04820.3 ID=NO02G04820.3|Name=NO02G04820.3|organism=Nannochloropsis oceanica|type=CDS|length=2460bp|location=Sequence derived from alignment at chr2:1303865..1309286- (Nannochloropsis oceanica)
ATGTCACTCATACACTCTCCCTTATCATGTTACTACAAATGCAGCGCGGC
GTTGGCAGATTGTCCTTTGGTGGAGATTGTGCATTTCCACGACTGCCTGC
GGGGGGAAGTCAAACTCTTTGCGGCGGGCACCGCCAAGCTCAGAGCAATC
GTCGGCAGCCGCGGGGTCTTCTCACAAGAAGTTATCGATCTCGAGGCCCA
ACTCCATGCACAGTTCCTCTCCCTTCGACGCGTCTTCCAAGCGCACAGCA
AGGCCGAGGACGACCTCATCTGGCCCGCCCTCCGTGAAAAGGCCTGGCGA
GACGGCGTTGCTCGGGAGTCCCTGGAATGTGCTTTGGAAGAGGATCATTC
CGATGAGGAATACATATTTGCCGAGATTGAGGGTTTGTTGGCCTTGTTTG
AGAAAGGGTGCAATCCTCCACCACCGCTGCTCTCGCCATCCTCTTCTTCT
TCACCAGCAATATCTACAGCAACAACAGCAGCATCAGCGGCAACAGCAGC
AGCAGCAACGGCAGCAGTAGCATCCCTCCCCAACGTGGCCGAAACCACCC
GCGAAGCTCTCCGCCTGCTTTCGGAGCTCGAAGGGCTGGCAATCCGGGCG
TCGGAGAATATGATCAGTCACTTGCAGCGAGAGGAGACTGAGGTCTTGCC
GTTGATTCAACGGTGTTTTTCCCGGGAGGAGATGGCGCGATTGGTGGGGA
CCATCCTGGGAGAGAGGCCGGGGGATCTGATGGACACGATTTTGGCAATG
ATGTTCCGCAATCTGACCCCTGAATCGAGGGCTGACATGCTGCGGCACGT
CAAGCACGCAGTGGACGGGACGTTTTTTGATCGATGGTTAAGCTATGTCC
GGCTGGCGCACCAGGGATCAGCTGCTGCTTTTCTGGACGAGGCGGCAGGA
GGGGATGAGAGCACCCTGGAGAGGGAGAGCAAGGTGGCTGAAGAGAAGAA
TGCGAGGACGGGTGCAGTTGGGGGGGGAGGAGGAGGAATGGGAGGAGGAG
AAGGGGGAGGGGGGAAGACGGAGGTGGGGTGTTTCATGGCTTGTGGTCGT
GACAGCGAGGAAGGGGGGGAGGATCAGGTGCACACCGCGGATGGAATTTG
TGCGTCTCCCCACAATGGCCGTACGTGTACCAACACGCATCACCACCACC
ATGAACGGGGAAAGCCTCGCCCTGGCTGTCGTATGTGCGGTTGGGTGGGC
CGATGTCCCCGCGAGTCGAAATTAGAACCCCAAGAATTCGAAGCGGCCGT
TCGCGCAATTGCGAGAGACAACAGCTTGGGGATGACGGACAAGAGTAAAG
CGGTGCAAACCCTTCGGTCATGTTCTTGGCAGCAGAAAAGGCCCAGGCCA
GGGCGAACCATCACGGCAGGTACGGTTGGCCATATCCATCCCCCTCCACC
TCCCTCATCCTCGTCCTCCACCTCGGGCACTTCCTCCTCTTCTTCCTCGT
CGGCAATGCGCCCTTCCTCCCTCTCCGCCATCCCCGCTGCCAACATCACC
AGCAATAGCAGCAGCAACAGCAACACAATCTCCTCGCAACTCAAGGCGCC
AAGCGTGGCCATGCCCCTCCCTCCCCCTCACCGCCCTCCCTCCGCCGTCA
AAGAGGCCCACGATCGCTCCCCATCCCACACCCCCACGGGTGAACTCGGT
TGCAAGCACTACCGCCGCGCCTGCAAACTCCGCGCAGCCTGCTGTGGCCG
TCTTTATCCTTGTCGTCTTTGTCACGACGAGGCGGCGGGAGACCACGCGA
TGGATCGCTATGCAGTGACGGAAATTTGTTGCATGCATTGTGGTGAGCTC
CAGCCGCCAGCAAGGGCATGTAGGAATCAGGGGTGTCGGCAGATTTTCAG
CGCCTACTATTGCGACATCTGTAGGTTGTATGATGATGCGGCGGGAAAAG
CCATATACCACTGTCCCTACTGCAATGTGTGCCGACTTGGGAAGGGTCTT
GGGATTGACTTCCGGCACTGCATGACATGCAATGCGTGTGTATCTCTCAA
CGTAGCCCCAGAGAAGCATAAGTGCATCGAGCAGGCGCTGCAGAGAGACT
GTCCAGTGTGTTCCGAGCCATTGTTCACGAGCACGACGCACTATAAAGTC
TTATCGTTGTGTGGGCATTCCATGCATCGGCAGTGCTATGAGGCCTATCG
ACAGACGGCTTACACGTGCCCGATCTGCAAGAAGTCCATGGAGGATATGA
CGAGTCATTTTGCAGGGCTTGACCTACTCTTGCAGACCTACCCTATGCCG
ATTGAGTTTGCCACGTGGCGCTCGGATGTGTTATGTCAGGACTGTGGGGA
GGAGAGTCATGATATTCCCTACCATTTTTTGTACCATAAGTGCACGCGTG
GATGTGGGAGCTATAATACTCGGGTATTGCAGGCGGGCGATCGAGGAGGT
GGGGCAGGGGGGATTGGAGGGGGAGTTGGAGGTGAAGGAGGAAATGGGGA
GTCGTCGTGA

Synonyms

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