NO02G03250.1, NO02G03250.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G03250.1
Unique Name	NO02G03250.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3739
Alignment location	chr2:872675..876413 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:872675..876413 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G03250.1 vs.
Match: EWM30281.1 (elongation factor 2 [Nannochloropsis gaditana])

HSP 1 Score: 1676.0 bits (4339), Expect = 0.000e+0
Identity = 830/879 (94.43%), Postives = 854/879 (97.16%), Query Frame = 0

Query:   59 MVNFTVDQLRAMMDLKHNIRNMSVIAHVDHGKSTLTDSLVSKAGIISAKNAGDARFTDTRADEQERCITIKSTGISMFFEYDMDAGEKLAQAAAEEQLTGEKKDNASAESASNKADNDTAIATAAASNVDINDKCFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCIEGVCVQTETVLRQAISERVRPVLMVNKVDRALLELQLPPEEMYQSFSRAIESVNVIIATYNDALMGDVQVYPDKGTVAFGSGLHQWGFTLKKFARTYAAKFNTDEASFMGKLWGDWYYDQDAKKWKTQSENGTLKRAFCQFIMDPICKIFEAVMEDKTAKVEKMLKVIGVTLKGDDKELRGKPLLKRIMQKWIPAADAILEMIVIHLPSPVAAQKYRVDNLYDGPLDDETAQAIRTCDTSPGAPLCMYVSKMVPTSDKGRFYAFGRVFAGRIATGQKCRILGPNYVPGKKTDLWVKNIQRTIVMMGRYVEQVQDVPAGNTCGLVGVDQYLLKSGTICTSESAHCIKTMKFSVSPVVRVAVEPKNSADLPKLVEGMKRLAKSDPMVLCYTEESGEHIIAGAGELHLEICLKDLQEDYMGTEVKISDPVVSYRETVTAVSKQTCLSKSPNKHNRLYATAEPLAEGLPDEIEDGKVNARDDFKLRARYLADTHGWDVTEARKIWAFAPDGTGPNIVLDATKGVNYLNEIKESVCSGFQQACGQGPMADEQCRGVCVKVLDVVLHADAIHRGMGQIQPTARRVVHACILTASPGLLEPVYLCEISCPQDAMGGCYGVLTRRRGHVFSEEQRPGTPMMTLKAYLPVMESFGFTADLRAGTGGKAFPQCVFDHWQMMNGDCLEPGSKANEVVLGVRKRKGLAPEIPPLDRFLDKL 938
            MVNFTVDQLRAMMDLKHNIRNMSVIAHVDHGKSTLTDSLVSKAGII+AKNAGDARFTDTRADEQERCITIKSTGISMFFEYDMDAGEKLAQAAAE QLTGEK D A A SA     N +AI TAAA+NV+INDKCFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCIEGVCVQTETVLRQAISERVRPVLMVNKVDRALLELQLPPEEMYQSFSRAIESVNVIIATYNDALMGDVQVYP+KGTVAFGSGLHQWGFTLKKFARTYAAKFNTDE+SFM KLWGDW+YDQ+AKKWKTQSENGTLKRAFCQFIMDPICK+FEAVMEDKTAK+EKMLKVIGVTLKGDDKEL+GKPLLKRIMQKWIPAADAILEMIV+HLPSPVAAQKYRVDNLYDGPLDDETA AIRTCDT P APLCMYVSKMVPTSDKGRFYAFGRVFAGRIATGQKCRILGPNYVPGKKTDLWVKNIQRTIVMMGRYVEQVQDVPAGNTCGLVGVDQYLLKSGTI T+E+AHCIKTMKFSVSPVVRVAVEPKNS+DLPKLVEGMKRLAKSDPMVLCYTEESGEHIIAGAGELHLEICLKDLQED+MGTEVKISDPVVSYRETVT VS QTCLSKSPNKHNRLYATAEPLA+GLPDEIEDGKVNARDDFKLRARYLADTHGWDVTEARKIWAFAPDGTGPNIVLDATKGVNYLNEIKESV  GFQQACGQGPMADEQ RGVCVK+LDVVLHADAIHRGMGQIQPTARRVVHACILTASPG+LEPVYLCEISCPQDAMGGCYGVLTRRRGHVFSEEQRPGTPMMTLKAYLPVMESFGFTADLRAGTGGKAFPQCVFDHWQMM GD LE G+K+NEV+LGVRKRKGL+PEIPPLDRFLD+L
Sbjct:    1 MVNFTVDQLRAMMDLKHNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAAKNAGDARFTDTRADEQERCITIKSTGISMFFEYDMDAGEKLAQAAAEAQLTGEKAD-AGASSA-----NSSAITTAAAANVEINDKCFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCIEGVCVQTETVLRQAISERVRPVLMVNKVDRALLELQLPPEEMYQSFSRAIESVNVIIATYNDALMGDVQVYPEKGTVAFGSGLHQWGFTLKKFARTYAAKFNTDESSFMQKLWGDWFYDQEAKKWKTQSENGTLKRAFCQFIMDPICKVFEAVMEDKTAKIEKMLKVIGVTLKGDDKELKGKPLLKRIMQKWIPAADAILEMIVVHLPSPVAAQKYRVDNLYDGPLDDETANAIRTCDTGPDAPLCMYVSKMVPTSDKGRFYAFGRVFAGRIATGQKCRILGPNYVPGKKTDLWVKNIQRTIVMMGRYVEQVQDVPAGNTCGLVGVDQYLLKSGTITTAENAHCIKTMKFSVSPVVRVAVEPKNSSDLPKLVEGMKRLAKSDPMVLCYTEESGEHIIAGAGELHLEICLKDLQEDFMGTEVKISDPVVSYRETVTGVSSQTCLSKSPNKHNRLYATAEPLADGLPDEIEDGKVNARDDFKLRARYLADTHGWDVTEARKIWAFAPDGTGPNIVLDATKGVNYLNEIKESVVGGFQQACGQGPMADEQVRGVCVKLLDVVLHADAIHRGMGQIQPTARRVVHACILTASPGVLEPVYLCEISCPQDAMGGCYGVLTRRRGHVFSEEQRPGTPMMTLKAYLPVMESFGFTADLRAGTGGKAFPQCVFDHWQMMGGDPLEAGTKSNEVMLGVRKRKGLSPEIPPLDRFLDRL 873

The following BLAST results are available for this feature:

BLAST of NO02G03250.1 vs.

BLAST of NO02G03250.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30281.1	0.000e+0	94.43	elongation factor 2 [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G03250	NO02G03250	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G03250.1	NO02G03250.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G03250.1.cds1	NO02G03250.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:872675..876413+
coding sequence from alignment at chr2:872675..876413+

mRNA sequence

>NO02G03250.1 ID=NO02G03250.1|Name=NO02G03250.1|organism=Nannochloropsis oceanica|type=mRNA|length=3739bp
GGGCCATGCAACCTCCCCAACGAGAACGGCTCGGATCGTGCAGCGGGAGA
GAGCCCCAGCCACTCGCTAAACTCCAACTGAATGCTGAACCATTGATGAA
GTCTCCACCACGACGAGGGGATTGTTGGGCTTGATACCGATGCGGCCACA
AGTCGTTTCCACCATGTTGCTCAAATGAGCGCGGCGGTGATTGTCGTTGG
ACAGGGCAGGCGAAACTTGACTGTTTTGTTGAGTAGAGGCCACCTCATTC
CTGCGCAAGGAATCCACCACACACGCACCGGCACAGAACGGGTAATGCTG
TCACGCAAGGTTTCCATAGAAAAACATGATGGGGTGCCCAGGAGGCTACG
ATTGGAATGAGCATCCAATTGGAATTCAATCTAGGGGTGGGGATGCCTGG
ATGGCTGGCTGCGCATGAAGCGCGCCCTCTCATCTCAAGCCACGCGCTTG
GCTTCGTTCGATCATTCACTCACACACCTCTGTCCTCCACCCACATATCG
CCCTGACAGGAAACCCCCCCTTTCCTCTTTCACCCCAGCGTTTGCCGTCC
GACCCCCTCAGCAGCAGCAGCAAGCAATCGCGCGAAAGATGGTGAACTTC
ACGGTCGACCAGCTCCGGGCCATGATGGACCTGAAGCACAACATCCGTAA
CATGTCCGTGATTGCACACGTCGACCACGGCAAATCCACCCTTACGGACT
CTCTTGTGTCCAAGGCCGGTATTATTTCCGCGAAGAACGCCGGAGACGCG
CGTTTTACGGACACACGCGCTGACGAGCAGGAGCGCTGCATCACCATCAA
GTCCACCGGAATTTCCATGTTCTTCGAGTACGACATGGATGCCGGAGAGA
AGCTAGCCCAGGCTGCTGCCGAGGAGCAGCTCACAGGCGAGAAGAAAGAC
AACGCCTCCGCTGAAAGCGCTTCCAACAAGGCCGATAACGATACTGCCAT
CGCCACGGCCGCCGCTTCAAACGTGGACATCAACGACAAGTGCTTCCTGA
TCAATCTTATTGACTCCCCCGGCCACGTCGACTTCTCTTCCGAGGTGACG
GCTGCGCTCCGCGTGACGGACGGTGCCCTGGTGGTGGTGGACTGTATTGA
GGGTGTGTGCGTGCAGACCGAGACCGTGCTGCGACAGGCCATCTCGGAGC
GCGTTCGCCCCGTGCTGATGGTCAACAAGGTGGACCGCGCTCTGCTAGAG
CTACAGCTGCCGCCTGAGGAGATGTACCAGTCTTTCTCCCGCGCCATCGA
GTCTGTGAACGTGATCATTGCCACTTACAACGACGCGCTCATGGGCGATG
TGCAGGTCTACCCCGACAAAGGCACAGTCGCATTCGGGTCCGGCCTTCAC
CAGTGGGGCTTTACACTCAAGAAGTTTGCTCGCACATACGCGGCCAAGTT
CAACACGGATGAGGCGTCGTTTATGGGCAAGCTGTGGGGCGACTGGTACT
ACGATCAGGACGCCAAGAAGTGGAAGACACAGAGCGAGAACGGCACGCTC
AAGCGAGCATTCTGTCAGTTCATCATGGACCCCATCTGCAAGATCTTCGA
GGCCGTGATGGAGGACAAGACTGCAAAAGTGGAGAAGATGCTCAAGGTCA
TCGGCGTGACGCTCAAGGGTGACGATAAGGAACTCAGGGGCAAGCCCTTG
CTTAAGCGCATCATGCAGAAGTGGATCCCGGCCGCAGACGCCATTCTGGA
AATGATTGTCATCCACCTGCCGTCGCCTGTGGCGGCGCAGAAGTACCGTG
TAGACAATTTGTACGATGGTCCCCTGGACGATGAGACGGCTCAGGCCATC
CGCACCTGCGACACTAGCCCGGGCGCGCCGTTATGCATGTACGTGTCCAA
GATGGTGCCCACATCGGACAAAGGCCGCTTCTATGCCTTCGGTCGCGTCT
TTGCCGGCCGCATCGCAACGGGCCAGAAGTGTCGTATCCTGGGCCCAAAC
TACGTGCCGGGCAAGAAGACCGACCTGTGGGTCAAAAATATCCAGCGCAC
CATTGTCATGATGGGGCGGTACGTGGAGCAGGTGCAGGACGTGCCGGCCG
GCAACACGTGCGGGTTAGTGGGCGTGGACCAGTACCTGCTCAAGTCGGGC
ACCATCTGCACGTCAGAGTCGGCGCACTGCATCAAGACCATGAAATTTTC
CGTCTCGCCCGTGGTGCGCGTGGCTGTCGAGCCCAAGAACTCGGCAGACC
TGCCTAAGCTGGTGGAGGGCATGAAGCGCTTGGCCAAGTCGGACCCCATG
GTGCTCTGCTACACCGAGGAGTCAGGAGAGCACATTATCGCTGGTGCGGG
TGAGCTGCACTTGGAAATCTGTCTCAAGGACCTGCAAGAGGACTACATGG
GGACGGAGGTGAAGATCTCGGACCCCGTGGTATCGTACCGCGAGACCGTT
ACGGCCGTCTCCAAGCAGACGTGTCTGTCCAAGTCCCCCAACAAGCACAA
CCGCCTCTACGCCACGGCTGAGCCCCTTGCAGAGGGCCTGCCCGATGAGA
TCGAGGACGGCAAGGTCAATGCCCGTGACGACTTTAAGCTCCGTGCCCGC
TACCTGGCGGACACACACGGCTGGGACGTGACGGAGGCGCGAAAGATCTG
GGCCTTCGCGCCCGACGGCACGGGTCCCAACATTGTACTGGACGCCACCA
AGGGCGTAAACTACCTGAACGAGATCAAAGAATCAGTCTGCAGCGGTTTT
CAGCAGGCCTGCGGGCAGGGCCCCATGGCGGACGAGCAGTGCCGTGGCGT
GTGCGTCAAAGTTCTGGACGTAGTACTGCACGCCGACGCCATCCACCGTG
GCATGGGTCAGATTCAGCCCACGGCCCGCCGCGTGGTACACGCCTGCATC
CTCACGGCCTCCCCCGGCCTTCTGGAGCCCGTTTACCTGTGCGAGATCTC
TTGCCCCCAGGATGCCATGGGCGGCTGTTATGGTGTGCTCACGCGGCGCC
GCGGCCATGTCTTCTCCGAGGAGCAGCGACCTGGCACGCCCATGATGACG
CTTAAGGCATACTTGCCTGTTATGGAGTCGTTCGGCTTCACGGCTGACCT
CCGTGCCGGCACTGGCGGCAAGGCATTCCCTCAGTGCGTGTTCGACCACT
GGCAGATGATGAACGGGGACTGCCTGGAGCCCGGCAGCAAGGCAAATGAA
GTCGTCCTTGGAGTGCGCAAGCGCAAGGGTCTTGCCCCTGAGATCCCCCC
CCTGGACCGTTTCCTCGACAAGCTCTAAGGCCTCCACCGCTTGCGTCTGC
ATCTACCGTTGCACTTACCCTAGCTTTTGTGTTGCTGCCGGCGCATACCT
TGTTTTGGCCCGGCAAAGCGAGGCAGGAATCAGGCTCATTACACACAAAC
CTACCCACACCATCAAGCAACATCGTTATATCAGACGTCAGTTCTCATTT
TATGTTTGGGGGAGTAAGTGGATTACTTAGAGCGGACGTGGACCGAAGAC
ACGTCAATCTCGGTTAGGAATTATTATTAAAGCGAGTAGGAAACGAGGAA
GAGAGTTGAAAGAAAGCTGGTAGGAAATGAGTTTAGCACACGGTGATTTA
CAGGTGGTAATGGTCCGAGAGGCAAAATGGGTAGCACGGGCGTATTTCCG
CTGTCTGCGTCCCTGTCGCTGTCCAGCATTGGTACACGTCAGGAAACGAG
GGTGGAGAGGGAATCCTTAAAATGGTGGGTTAACGGTTGGCCTAACGCAA
CAGCACGGAAGAAGAAAACTAGACATGGAAAAAGACAAG

protein sequence of NO02G03250.1

>NO02G03250.1-protein ID=NO02G03250.1-protein|Name=NO02G03250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=938bp
MKRALSSQATRLASFDHSLTHLCPPPTYRPDRKPPLSSFTPAFAVRPPQQ
QQQAIARKMVNFTVDQLRAMMDLKHNIRNMSVIAHVDHGKSTLTDSLVSK
AGIISAKNAGDARFTDTRADEQERCITIKSTGISMFFEYDMDAGEKLAQA
AAEEQLTGEKKDNASAESASNKADNDTAIATAAASNVDINDKCFLINLID
SPGHVDFSSEVTAALRVTDGALVVVDCIEGVCVQTETVLRQAISERVRPV
LMVNKVDRALLELQLPPEEMYQSFSRAIESVNVIIATYNDALMGDVQVYP
DKGTVAFGSGLHQWGFTLKKFARTYAAKFNTDEASFMGKLWGDWYYDQDA
KKWKTQSENGTLKRAFCQFIMDPICKIFEAVMEDKTAKVEKMLKVIGVTL
KGDDKELRGKPLLKRIMQKWIPAADAILEMIVIHLPSPVAAQKYRVDNLY
DGPLDDETAQAIRTCDTSPGAPLCMYVSKMVPTSDKGRFYAFGRVFAGRI
ATGQKCRILGPNYVPGKKTDLWVKNIQRTIVMMGRYVEQVQDVPAGNTCG
LVGVDQYLLKSGTICTSESAHCIKTMKFSVSPVVRVAVEPKNSADLPKLV
EGMKRLAKSDPMVLCYTEESGEHIIAGAGELHLEICLKDLQEDYMGTEVK
ISDPVVSYRETVTAVSKQTCLSKSPNKHNRLYATAEPLAEGLPDEIEDGK
VNARDDFKLRARYLADTHGWDVTEARKIWAFAPDGTGPNIVLDATKGVNY
LNEIKESVCSGFQQACGQGPMADEQCRGVCVKVLDVVLHADAIHRGMGQI
QPTARRVVHACILTASPGLLEPVYLCEISCPQDAMGGCYGVLTRRRGHVF
SEEQRPGTPMMTLKAYLPVMESFGFTADLRAGTGGKAFPQCVFDHWQMMN
GDCLEPGSKANEVVLGVRKRKGLAPEIPPLDRFLDKL*

mRNA from alignment at chr2:872675..876413+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G03250.1 ID=NO02G03250.1|Name=NO02G03250.1|organism=Nannochloropsis oceanica|type=mRNA|length=3739bp|location=Sequence derived from alignment at chr2:872675..876413+ (Nannochloropsis oceanica)
GGGCCATGCAACCTCCCCAACGAGAACGGCTCGGATCGTGCAGCGGGAGA
GAGCCCCAGCCACTCGCTAAACTCCAACTGAATGCTGAACCATTGATGAA
GTCTCCACCACGACGAGGGGATTGTTGGGCTTGATACCGATGCGGCCACA
AGTCGTTTCCACCATGTTGCTCAAATGAGCGCGGCGGTGATTGTCGTTGG
ACAGGGCAGGCGAAACTTGACTGTTTTGTTGAGTAGAGGCCACCTCATTC
CTGCGCAAGGAATCCACCACACACGCACCGGCACAGAACGGGTAATGCTG
TCACGCAAGGTTTCCATAGAAAAACATGATGGGGTGCCCAGGAGGCTACG
ATTGGAATGAGCATCCAATTGGAATTCAATCTAGGGGTGGGGATGCCTGG
ATGGCTGGCTGCGCATGAAGCGCGCCCTCTCATCTCAAGCCACGCGCTTG
GCTTCGTTCGATCATTCACTCACACACCTCTGTCCTCCACCCACATATCG
CCCTGACAGGAAACCCCCCCTTTCCTCTTTCACCCCAGCGTTTGCCGTCC
GACCCCCTCAGCAGCAGCAGCAAGCAATCGCGCGAAAGATGGTGAACTTC
ACGGTCGACCAGCTCCGGGCCATGATGGACCTGAAGCACAACATCCGTAA
CATGTCCGTGATTGCACACGTCGACCACGGCAAATCCACCCTTACGGACT
CTCTTGTGTCCAAGGCCGGTATTATTTCCGCGAAGAACGCCGGAGACGCG
CGTTTTACGGACACACGCGCTGACGAGCAGGAGCGCTGCATCACCATCAA
GTCCACCGGAATTTCCATGTTCTTCGAGTACGACATGGATGCCGGAGAGA
AGCTAGCCCAGGCTGCTGCCGAGGAGCAGCTCACAGGCGAGAAGAAAGAC
AACGCCTCCGCTGAAAGCGCTTCCAACAAGGCCGATAACGATACTGCCAT
CGCCACGGCCGCCGCTTCAAACGTGGACATCAACGACAAGTGCTTCCTGA
TCAATCTTATTGACTCCCCCGGCCACGTCGACTTCTCTTCCGAGGTGACG
GCTGCGCTCCGCGTGACGGACGGTGCCCTGGTGGTGGTGGACTGTATTGA
GGGTGTGTGCGTGCAGACCGAGACCGTGCTGCGACAGGCCATCTCGGAGC
GCGTTCGCCCCGTGCTGATGGTCAACAAGGTGGACCGCGCTCTGCTAGAG
CTACAGCTGCCGCCTGAGGAGATGTACCAGTCTTTCTCCCGCGCCATCGA
GTCTGTGAACGTGATCATTGCCACTTACAACGACGCGCTCATGGGCGATG
TGCAGGTCTACCCCGACAAAGGCACAGTCGCATTCGGGTCCGGCCTTCAC
CAGTGGGGCTTTACACTCAAGAAGTTTGCTCGCACATACGCGGCCAAGTT
CAACACGGATGAGGCGTCGTTTATGGGCAAGCTGTGGGGCGACTGGTACT
ACGATCAGGACGCCAAGAAGTGGAAGACACAGAGCGAGAACGGCACGCTC
AAGCGAGCATTCTGTCAGTTCATCATGGACCCCATCTGCAAGATCTTCGA
GGCCGTGATGGAGGACAAGACTGCAAAAGTGGAGAAGATGCTCAAGGTCA
TCGGCGTGACGCTCAAGGGTGACGATAAGGAACTCAGGGGCAAGCCCTTG
CTTAAGCGCATCATGCAGAAGTGGATCCCGGCCGCAGACGCCATTCTGGA
AATGATTGTCATCCACCTGCCGTCGCCTGTGGCGGCGCAGAAGTACCGTG
TAGACAATTTGTACGATGGTCCCCTGGACGATGAGACGGCTCAGGCCATC
CGCACCTGCGACACTAGCCCGGGCGCGCCGTTATGCATGTACGTGTCCAA
GATGGTGCCCACATCGGACAAAGGCCGCTTCTATGCCTTCGGTCGCGTCT
TTGCCGGCCGCATCGCAACGGGCCAGAAGTGTCGTATCCTGGGCCCAAAC
TACGTGCCGGGCAAGAAGACCGACCTGTGGGTCAAAAATATCCAGCGCAC
CATTGTCATGATGGGGCGGTACGTGGAGCAGGTGCAGGACGTGCCGGCCG
GCAACACGTGCGGGTTAGTGGGCGTGGACCAGTACCTGCTCAAGTCGGGC
ACCATCTGCACGTCAGAGTCGGCGCACTGCATCAAGACCATGAAATTTTC
CGTCTCGCCCGTGGTGCGCGTGGCTGTCGAGCCCAAGAACTCGGCAGACC
TGCCTAAGCTGGTGGAGGGCATGAAGCGCTTGGCCAAGTCGGACCCCATG
GTGCTCTGCTACACCGAGGAGTCAGGAGAGCACATTATCGCTGGTGCGGG
TGAGCTGCACTTGGAAATCTGTCTCAAGGACCTGCAAGAGGACTACATGG
GGACGGAGGTGAAGATCTCGGACCCCGTGGTATCGTACCGCGAGACCGTT
ACGGCCGTCTCCAAGCAGACGTGTCTGTCCAAGTCCCCCAACAAGCACAA
CCGCCTCTACGCCACGGCTGAGCCCCTTGCAGAGGGCCTGCCCGATGAGA
TCGAGGACGGCAAGGTCAATGCCCGTGACGACTTTAAGCTCCGTGCCCGC
TACCTGGCGGACACACACGGCTGGGACGTGACGGAGGCGCGAAAGATCTG
GGCCTTCGCGCCCGACGGCACGGGTCCCAACATTGTACTGGACGCCACCA
AGGGCGTAAACTACCTGAACGAGATCAAAGAATCAGTCTGCAGCGGTTTT
CAGCAGGCCTGCGGGCAGGGCCCCATGGCGGACGAGCAGTGCCGTGGCGT
GTGCGTCAAAGTTCTGGACGTAGTACTGCACGCCGACGCCATCCACCGTG
GCATGGGTCAGATTCAGCCCACGGCCCGCCGCGTGGTACACGCCTGCATC
CTCACGGCCTCCCCCGGCCTTCTGGAGCCCGTTTACCTGTGCGAGATCTC
TTGCCCCCAGGATGCCATGGGCGGCTGTTATGGTGTGCTCACGCGGCGCC
GCGGCCATGTCTTCTCCGAGGAGCAGCGACCTGGCACGCCCATGATGACG
CTTAAGGCATACTTGCCTGTTATGGAGTCGTTCGGCTTCACGGCTGACCT
CCGTGCCGGCACTGGCGGCAAGGCATTCCCTCAGTGCGTGTTCGACCACT
GGCAGATGATGAACGGGGACTGCCTGGAGCCCGGCAGCAAGGCAAATGAA
GTCGTCCTTGGAGTGCGCAAGCGCAAGGGTCTTGCCCCTGAGATCCCCCC
CCTGGACCGTTTCCTCGACAAGCTCTAAGGCCTCCACCGCTTGCGTCTGC
ATCTACCGTTGCACTTACCCTAGCTTTTGTGTTGCTGCCGGCGCATACCT
TGTTTTGGCCCGGCAAAGCGAGGCAGGAATCAGGCTCATTACACACAAAC
CTACCCACACCATCAAGCAACATCGTTATATCAGACGTCAGTTCTCATTT
TATGTTTGGGGGAGTAAGTGGATTACTTAGAGCGGACGTGGACCGAAGAC
ACGTCAATCTCGGTTAGGAATTATTATTAAAGCGAGTAGGAAACGAGGAA
GAGAGTTGAAAGAAAGCTGGTAGGAAATGAGTTTAGCACACGGTGATTTA
CAGGTGGTAATGGTCCGAGAGGCAAAATGGGTAGCACGGGCGTATTTCCG
CTGTCTGCGTCCCTGTCGCTGTCCAGCATTGGTACACGTCAGGAAACGAG
GGTGGAGAGGGAATCCTTAAAATGGTGGGTTAACGGTTGGCCTAACGCAA
CAGCACGGAAGAAGAAAACTAGACATGGAAAAAGACAAG

Coding sequence (CDS) from alignment at chr2:872675..876413+

>NO02G03250.1 ID=NO02G03250.1|Name=NO02G03250.1|organism=Nannochloropsis oceanica|type=CDS|length=2814bp|location=Sequence derived from alignment at chr2:872675..876413+ (Nannochloropsis oceanica)
ATGAAGCGCGCCCTCTCATCTCAAGCCACGCGCTTGGCTTCGTTCGATCA
TTCACTCACACACCTCTGTCCTCCACCCACATATCGCCCTGACAGGAAAC
CCCCCCTTTCCTCTTTCACCCCAGCGTTTGCCGTCCGACCCCCTCAGCAG
CAGCAGCAAGCAATCGCGCGAAAGATGGTGAACTTCACGGTCGACCAGCT
CCGGGCCATGATGGACCTGAAGCACAACATCCGTAACATGTCCGTGATTG
CACACGTCGACCACGGCAAATCCACCCTTACGGACTCTCTTGTGTCCAAG
GCCGGTATTATTTCCGCGAAGAACGCCGGAGACGCGCGTTTTACGGACAC
ACGCGCTGACGAGCAGGAGCGCTGCATCACCATCAAGTCCACCGGAATTT
CCATGTTCTTCGAGTACGACATGGATGCCGGAGAGAAGCTAGCCCAGGCT
GCTGCCGAGGAGCAGCTCACAGGCGAGAAGAAAGACAACGCCTCCGCTGA
AAGCGCTTCCAACAAGGCCGATAACGATACTGCCATCGCCACGGCCGCCG
CTTCAAACGTGGACATCAACGACAAGTGCTTCCTGATCAATCTTATTGAC
TCCCCCGGCCACGTCGACTTCTCTTCCGAGGTGACGGCTGCGCTCCGCGT
GACGGACGGTGCCCTGGTGGTGGTGGACTGTATTGAGGGTGTGTGCGTGC
AGACCGAGACCGTGCTGCGACAGGCCATCTCGGAGCGCGTTCGCCCCGTG
CTGATGGTCAACAAGGTGGACCGCGCTCTGCTAGAGCTACAGCTGCCGCC
TGAGGAGATGTACCAGTCTTTCTCCCGCGCCATCGAGTCTGTGAACGTGA
TCATTGCCACTTACAACGACGCGCTCATGGGCGATGTGCAGGTCTACCCC
GACAAAGGCACAGTCGCATTCGGGTCCGGCCTTCACCAGTGGGGCTTTAC
ACTCAAGAAGTTTGCTCGCACATACGCGGCCAAGTTCAACACGGATGAGG
CGTCGTTTATGGGCAAGCTGTGGGGCGACTGGTACTACGATCAGGACGCC
AAGAAGTGGAAGACACAGAGCGAGAACGGCACGCTCAAGCGAGCATTCTG
TCAGTTCATCATGGACCCCATCTGCAAGATCTTCGAGGCCGTGATGGAGG
ACAAGACTGCAAAAGTGGAGAAGATGCTCAAGGTCATCGGCGTGACGCTC
AAGGGTGACGATAAGGAACTCAGGGGCAAGCCCTTGCTTAAGCGCATCAT
GCAGAAGTGGATCCCGGCCGCAGACGCCATTCTGGAAATGATTGTCATCC
ACCTGCCGTCGCCTGTGGCGGCGCAGAAGTACCGTGTAGACAATTTGTAC
GATGGTCCCCTGGACGATGAGACGGCTCAGGCCATCCGCACCTGCGACAC
TAGCCCGGGCGCGCCGTTATGCATGTACGTGTCCAAGATGGTGCCCACAT
CGGACAAAGGCCGCTTCTATGCCTTCGGTCGCGTCTTTGCCGGCCGCATC
GCAACGGGCCAGAAGTGTCGTATCCTGGGCCCAAACTACGTGCCGGGCAA
GAAGACCGACCTGTGGGTCAAAAATATCCAGCGCACCATTGTCATGATGG
GGCGGTACGTGGAGCAGGTGCAGGACGTGCCGGCCGGCAACACGTGCGGG
TTAGTGGGCGTGGACCAGTACCTGCTCAAGTCGGGCACCATCTGCACGTC
AGAGTCGGCGCACTGCATCAAGACCATGAAATTTTCCGTCTCGCCCGTGG
TGCGCGTGGCTGTCGAGCCCAAGAACTCGGCAGACCTGCCTAAGCTGGTG
GAGGGCATGAAGCGCTTGGCCAAGTCGGACCCCATGGTGCTCTGCTACAC
CGAGGAGTCAGGAGAGCACATTATCGCTGGTGCGGGTGAGCTGCACTTGG
AAATCTGTCTCAAGGACCTGCAAGAGGACTACATGGGGACGGAGGTGAAG
ATCTCGGACCCCGTGGTATCGTACCGCGAGACCGTTACGGCCGTCTCCAA
GCAGACGTGTCTGTCCAAGTCCCCCAACAAGCACAACCGCCTCTACGCCA
CGGCTGAGCCCCTTGCAGAGGGCCTGCCCGATGAGATCGAGGACGGCAAG
GTCAATGCCCGTGACGACTTTAAGCTCCGTGCCCGCTACCTGGCGGACAC
ACACGGCTGGGACGTGACGGAGGCGCGAAAGATCTGGGCCTTCGCGCCCG
ACGGCACGGGTCCCAACATTGTACTGGACGCCACCAAGGGCGTAAACTAC
CTGAACGAGATCAAAGAATCAGTCTGCAGCGGTTTTCAGCAGGCCTGCGG
GCAGGGCCCCATGGCGGACGAGCAGTGCCGTGGCGTGTGCGTCAAAGTTC
TGGACGTAGTACTGCACGCCGACGCCATCCACCGTGGCATGGGTCAGATT
CAGCCCACGGCCCGCCGCGTGGTACACGCCTGCATCCTCACGGCCTCCCC
CGGCCTTCTGGAGCCCGTTTACCTGTGCGAGATCTCTTGCCCCCAGGATG
CCATGGGCGGCTGTTATGGTGTGCTCACGCGGCGCCGCGGCCATGTCTTC
TCCGAGGAGCAGCGACCTGGCACGCCCATGATGACGCTTAAGGCATACTT
GCCTGTTATGGAGTCGTTCGGCTTCACGGCTGACCTCCGTGCCGGCACTG
GCGGCAAGGCATTCCCTCAGTGCGTGTTCGACCACTGGCAGATGATGAAC
GGGGACTGCCTGGAGCCCGGCAGCAAGGCAAATGAAGTCGTCCTTGGAGT
GCGCAAGCGCAAGGGTCTTGCCCCTGAGATCCCCCCCCTGGACCGTTTCC
TCGACAAGCTCTAA

Synonyms

Publications