NO02G02420.1, NO02G02420.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G02420.1
Unique Name	NO02G02420.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3813
Alignment location	chr2:667723..671535 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:667723..671535 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G02420.1 vs.
Match: EWM30394.1 (WD40-repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 2243.4 bits (5812), Expect = 0.000e+0
Identity = 1135/1273 (89.16%), Postives = 1198/1273 (94.11%), Query Frame = 0

Query:    1 MASTGIAPALSLLNLTLQRPGYIHAAVSGNFSSPKAQEVVVIRGTSYLELLRTDAERLKVVPVCTFNTFCNLRCLLTFRQVGTNKDYLVVGADTGRITILEYVVDSNEFRTVHCETFGKSACRRIVPGQYLAADPLGRAIMISAVEKQKLVYVMNRDAGGRLTISSPLEAHKSHALVYATVGLDVGTENPIFAAIEKDYSDADQDPTGEAAAETYKQLVYYELDLGLNHVIRKWSQPIASTALSLLAVPGERANGPGGVLILSENWVAYTHQDHPELRTPIPRRAGQPASRGTLLTASAMHRQKDVLFYLLQSEYGDLYKVTLDLSEDRTKVQNINMQVFDTIPSANGLCITKTGLLLCASEFANHMLYQFQGIDNPEAVAADSLEEEALDDEDKLGDSSEEAAQVAPTFTPAAKLKNLAAVDVLESLAPVTGMHVADLAGEDAAQIYTLCGRGGRSSLRILRHGLQVSEEASSDLPGTPNAVWTIKGRQEEKHDRFIVVSFTNATLVFSIGDQIEEVTDSGFLGTAPTLEVKLLADNAMLQVHTHGIRHIRPGRPVNEWKTPGRKVIEQASANERQVAIALEGGDVVYFELDAAGMLMEVASKEIGLAVACLDLGPVPHGRVGSSFLAVGGYDSTVRVLSLEQVSLLTQRSMLQLSVRAESVCLAEMAKDGEGAG---GAATASSSSSSSLFLNVGLSNGIMQRLLLDPLEGTLSDSRQRFLGAKPVKLLRVNIEGSPAVLALSSRTWLSYNHQGRFLQTPLSYESLDYASDFASEYITEGLVAVTGSSLRIITIQNFGNMFNQTEVPLRYTPRQMVQVPGCSRLVLIESDHNEYNETERAFLATTEAAAAGDSHGGAAGGGEGGEEAPEDVAAAAALAAAEGALPPPPPPEGGTEDEEEAEGETFVRGPLPPVEGKWASCIRIVDGRTGETLELVELSLNEAAVSLATVAFHDRGGEVFVCVGTATDLCLHPRKHSAAAIHVYRLFDNRLVLLHKTEVEDVPKSLVELKGFGRLLAGIGHSLRMYDLGKKKLLKKCENRNLPNFIVGMQTMSDRIYVSDVLDSVHFVKYRRAENALVVFADDTAPRAVTACCTVDYDTIAGGDKFGNLFLLRLPEKVSDDVDNPTGNRVLWDTGRLNGAPNKVEVLAHFYVGEVVTALQKVALVPGGQEVILYTTVAGTVGALVPFSSRRSKNTFFLLEMEMRKEANLHFKRDHVAYRSYYAPVKEVIDGDLCELFGGLPVAKQRAVALEVLDRTPGEVLKLVEDFKNTIL 1271
            MAS  IAP L+LLNLT+QRPGYIHAAVSGNFSSPKAQEVVVIRGTSYLELLR+DAER K+ PVCTFNTFCNLRCLLTFRQVGTNKDYLVVG+D+GRITILEYVV++NEFRTVHCETFGK+ CRRIVPGQ+LAADPLGRAIMISA+EKQKLVYVMNRDAGGRLTISSPLEAH+SHALVYATVGLDVGTENPIFAAIEKDYS+ADQDPTGEAAAETYKQLVYYELDLGLNHVIRKW+QPIASTA SLLAVPGER NGPGGVLILSENWVAYTHQDHPELRTPIPRRAGQ ASRGTLLTA+AMHRQKDVLFYLLQSE+GDLYKVTLDL+++RT+VQNINMQVFDTIP ANGLCITKTGLLLCASEFANH+LYQFQGIDNPEAVAADSL+EEALDDEDKLGD++EEAA VAPTFTPA +LKNLAAVD +ESLAPVTGMHVADLAGEDAAQ+YTLCGRGGRSSLRILRHGLQV EEASSDLPG PNAVWTIKGRQ+E HDRFIVVSF NATLVFSIGDQIEEVTDSGFLGTAPTLEVKLLADNAMLQVHTHGIRHIRPGRPVNEWKTPGRK IEQASANERQVAIALEGGDVVYFELDAAGMLMEVASKE+GLAV+CLDLGPVP GRVGS+FLAVGGYDSTVR+LSLEQ SLLTQRSMLQLS  AESVCLAEMAK+GEGAG   G A +  +SSSSLFLNVGLSNGIMQRL+LDPLEGTLSDSRQRFLGAKPVKLLRV+IE   AVLALSSR WLSYNH GRF QTPLSY+ LDYAS FASEYI EGLVAVTGSSLRIITIQNFGN+FNQTEVPLRYTPRQMVQVPG SRLVLIESDHNEYNETERAFLA+T A  +  +       GE   +A + VAAAAALAAAEGALPPPPPPE GTEDE+ AEGETFVRGPLPPVEGKWASCIRIVDG TGETLELVEL+LNEAA+SL TVAFHDRGGEVF+CVGTATDLC HPRKHSAAAIHVYRLFDNRLVLLHKTEVEDVPKSL ELKGFGRLLAG+G SLRMYDLGKKKLLKKCENRNLPN IVG+QTM DRIYVSDVLDSVHFVKYRR ENALV+FADDT+PR +TACCTVDYDTIAGGDK GN+FLLRLPEKVSDDVDNPTGNRVLWDTGRLNGAPNK++VLAHFYVGEVVTALQKV+LVPGGQEVILY TVAGT+GALVPFSSRRSKNTFFLLEMEMRKEA+LHFKRDH+AYRSYY PVKEVIDGDLCELF  L   K+RAVALEVLDRTPGEV+KL+EDFKNTIL
Sbjct:    1 MASPNIAPPLNLLNLTMQRPGYIHAAVSGNFSSPKAQEVVVIRGTSYLELLRSDAERFKITPVCTFNTFCNLRCLLTFRQVGTNKDYLVVGSDSGRITILEYVVEANEFRTVHCETFGKTGCRRIVPGQFLAADPLGRAIMISALEKQKLVYVMNRDAGGRLTISSPLEAHRSHALVYATVGLDVGTENPIFAAIEKDYSEADQDPTGEAAAETYKQLVYYELDLGLNHVIRKWAQPIASTACSLLAVPGERFNGPGGVLILSENWVAYTHQDHPELRTPIPRRAGQAASRGTLLTAAAMHRQKDVLFYLLQSEFGDLYKVTLDLNQERTRVQNINMQVFDTIPPANGLCITKTGLLLCASEFANHILYQFQGIDNPEAVAADSLDEEALDDEDKLGDTAEEAASVAPTFTPAKQLKNLAAVDRMESLAPVTGMHVADLAGEDAAQLYTLCGRGGRSSLRILRHGLQVVEEASSDLPGRPNAVWTIKGRQDEAHDRFIVVSFANATLVFSIGDQIEEVTDSGFLGTAPTLEVKLLADNAMLQVHTHGIRHIRPGRPVNEWKTPGRKSIEQASANERQVAIALEGGDVVYFELDAAGMLMEVASKEVGLAVSCLDLGPVPQGRVGSNFLAVGGYDSTVRILSLEQASLLTQRSMLQLSATAESVCLAEMAKEGEGAGIGAGNAVSIPASSSSLFLNVGLSNGIMQRLVLDPLEGTLSDSRQRFLGAKPVKLLRVDIEDRSAVLALSSRAWLSYNHHGRFFQTPLSYQGLDYASGFASEYIPEGLVAVTGSSLRIITIQNFGNVFNQTEVPLRYTPRQMVQVPGSSRLVLIESDHNEYNETERAFLASTGAVESDKATDKEE--GEEPTKAADSVAAAAALAAAEGALPPPPPPEEGTEDEDGAEGETFVRGPLPPVEGKWASCIRIVDGLTGETLELVELALNEAAISLTTVAFHDRGGEVFICVGTATDLCFHPRKHSAAAIHVYRLFDNRLVLLHKTEVEDVPKSLAELKGFGRLLAGLGRSLRMYDLGKKKLLKKCENRNLPNLIVGLQTMGDRIYVSDVLDSVHFVKYRRLENALVIFADDTSPRTITACCTVDYDTIAGGDKVGNVFLLRLPEKVSDDVDNPTGNRVLWDTGRLNGAPNKLDVLAHFYVGEVVTALQKVSLVPGGQEVILYATVAGTIGALVPFSSRRSKNTFFLLEMEMRKEASLHFKRDHIAYRSYYTPVKEVIDGDLCELFRTLSAVKRRAVALEVLDRTPGEVVKLLEDFKNTIL 1271

The following BLAST results are available for this feature:

BLAST of NO02G02420.1 vs.

BLAST of NO02G02420.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30394.1	0.000e+0	89.16	WD40-repeat-containing protein [Nannochloropsis ga...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G02420	NO02G02420	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G02420.1	NO02G02420.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G02420.1.cds1	NO02G02420.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:667723..671535-
coding sequence from alignment at chr2:667723..671535-

mRNA sequence

>NO02G02420.1 ID=NO02G02420.1|Name=NO02G02420.1|organism=Nannochloropsis oceanica|type=mRNA|length=3813bp
ATGGCGTCGACCGGCATTGCCCCGGCGCTGAGCCTGCTGAATTTGACGCT
GCAACGACCGGGTTACATCCATGCTGCCGTATCGGGCAACTTTAGTTCGC
CCAAGGCTCAGGAGGTGGTGGTGATTCGTGGGACCAGCTACCTGGAGCTA
CTGCGCACGGACGCGGAGCGGCTTAAGGTGGTTCCTGTGTGTACGTTTAA
CACTTTTTGCAACTTACGCTGCCTCCTCACTTTTCGGCAAGTGGGAACCA
ACAAGGATTATCTGGTCGTCGGCGCAGACACGGGGCGCATCACCATCCTA
GAGTACGTCGTGGACTCGAATGAGTTCCGAACCGTACATTGCGAGACGTT
TGGAAAGTCGGCCTGTCGTCGTATCGTGCCTGGGCAGTATTTGGCGGCGG
ACCCACTGGGACGCGCCATAATGATAAGTGCGGTGGAGAAGCAAAAGCTA
GTGTATGTCATGAATCGAGACGCTGGAGGCCGGCTTACCATTTCCTCCCC
TCTGGAAGCTCACAAATCCCATGCATTAGTCTATGCAACAGTGGGGCTGG
ACGTGGGGACAGAAAACCCCATTTTTGCTGCGATAGAGAAGGATTACAGC
GATGCAGATCAGGACCCCACGGGGGAAGCAGCAGCGGAGACTTACAAGCA
GCTGGTATACTATGAGTTGGACTTGGGGTTGAACCATGTCATACGAAAGT
GGTCACAACCTATTGCATCTACGGCCTTATCTTTGCTGGCGGTGCCGGGG
GAGAGGGCCAATGGCCCGGGGGGTGTGCTGATCCTATCAGAGAATTGGGT
TGCGTACACACATCAAGACCACCCAGAGCTCCGCACACCCATCCCTCGCC
GCGCGGGACAGCCAGCTTCGAGGGGTACGCTGTTGACGGCCTCGGCGATG
CATCGGCAGAAGGACGTATTGTTTTATTTGTTGCAGTCGGAGTATGGGGA
TTTGTACAAGGTGACGTTGGATTTGAGCGAGGACCGGACGAAGGTCCAGA
ATATCAATATGCAGGTGTTTGATACAATCCCGTCGGCGAATGGGCTATGT
ATCACCAAGACGGGATTGCTTCTTTGTGCATCGGAGTTTGCAAATCACAT
GCTGTATCAGTTTCAGGGCATTGATAATCCTGAGGCCGTGGCTGCTGATT
CTTTGGAGGAGGAAGCGCTCGATGACGAGGACAAATTGGGAGATAGCTCG
GAGGAGGCTGCGCAGGTTGCTCCTACGTTTACCCCGGCGGCAAAATTGAA
GAATTTAGCGGCAGTCGATGTGTTAGAGAGCCTTGCGCCAGTCACGGGGA
TGCATGTGGCTGATTTGGCCGGGGAGGACGCAGCGCAGATTTACACGTTG
TGTGGGAGGGGGGGGAGAAGTAGCCTGAGGATTTTAAGACATGGATTGCA
GGTGTCAGAGGAGGCAAGTTCGGATTTGCCTGGGACACCGAATGCGGTTT
GGACGATCAAGGGAAGGCAGGAGGAGAAACATGATCGGTTTATTGTTGTG
TCGTTCACGAACGCCACGTTGGTATTTTCGATTGGGGATCAGATTGAGGA
AGTTACTGACTCGGGTTTTTTGGGTACGGCGCCGACGTTGGAGGTGAAGT
TGTTGGCGGATAACGCAATGTTGCAGGTGCACACGCATGGGATTCGCCAC
ATTCGGCCTGGAAGGCCTGTAAATGAGTGGAAAACCCCGGGGCGGAAAGT
GATTGAGCAGGCTTCGGCTAATGAACGACAGGTCGCTATTGCGTTGGAAG
GAGGAGATGTGGTGTACTTTGAGTTGGACGCCGCAGGAATGCTGATGGAA
GTGGCGTCGAAGGAGATCGGTTTAGCCGTGGCGTGCTTGGACTTGGGGCC
CGTGCCACATGGGAGGGTGGGGTCGAGTTTCCTGGCAGTGGGGGGGTATG
ATTCAACGGTGAGGGTTTTGTCGTTGGAGCAGGTTTCACTCTTGACGCAA
CGGAGTATGCTGCAACTGTCGGTGAGGGCCGAGTCTGTTTGTTTGGCGGA
GATGGCCAAGGATGGGGAGGGGGCAGGGGGTGCTGCGACTGCTTCTTCGT
CGTCGTCTTCCTCATTGTTTTTGAACGTAGGCCTGAGCAATGGGATTATG
CAAAGACTGCTGCTCGATCCTTTGGAAGGCACTCTCTCTGACAGTCGACA
ACGTTTCCTCGGTGCGAAACCCGTCAAGCTTCTCCGGGTCAACATCGAAG
GCAGCCCCGCCGTCCTTGCCCTCTCCTCCCGCACCTGGCTCTCCTACAAC
CATCAAGGACGTTTCCTCCAAACCCCCCTTTCCTACGAGAGCCTCGATTA
CGCCTCGGATTTTGCCTCTGAATATATCACAGAAGGTCTTGTGGCTGTCA
CAGGGAGCTCGCTCCGCATTATCACAATTCAAAATTTTGGAAATATGTTC
AACCAAACCGAGGTGCCCTTGCGGTATACCCCAAGGCAAATGGTCCAAGT
TCCAGGCTGTTCCCGCCTCGTCCTGATCGAATCTGACCACAACGAATACA
ATGAAACGGAACGCGCTTTTCTTGCCACAACGGAAGCTGCGGCTGCGGGT
GATAGTCATGGAGGAGCGGCTGGAGGAGGAGAGGGAGGCGAGGAAGCGCC
GGAGGATGTGGCGGCTGCTGCGGCGTTGGCAGCGGCGGAGGGGGCTTTGC
CTCCCCCACCGCCTCCTGAAGGAGGAACAGAAGATGAGGAAGAGGCGGAG
GGAGAGACGTTTGTGCGGGGGCCGTTGCCGCCTGTGGAGGGGAAGTGGGC
ATCGTGCATTCGCATCGTGGATGGCCGGACAGGAGAGACCTTGGAGTTGG
TGGAGTTGTCGTTGAACGAGGCGGCTGTGTCCCTGGCAACAGTGGCGTTC
CATGACAGAGGGGGGGAGGTCTTTGTATGTGTAGGGACGGCGACGGATTT
GTGTCTACACCCAAGAAAGCATAGTGCGGCGGCTATTCATGTGTATCGTT
TGTTTGATAACCGTTTGGTGTTGCTACATAAAACGGAGGTGGAAGATGTA
CCTAAGAGTCTGGTCGAATTGAAAGGATTCGGAAGGCTCCTTGCGGGTAT
AGGGCATTCCTTGCGCATGTACGACTTGGGGAAGAAGAAGCTTTTGAAGA
AGTGCGAGAATCGGAATTTGCCAAATTTCATCGTAGGGATGCAGACGATG
AGCGACCGAATTTATGTCTCTGACGTGTTAGATAGCGTGCATTTTGTCAA
ATACCGGCGGGCAGAGAATGCATTGGTGGTGTTTGCCGATGATACGGCTC
CGCGGGCGGTCACGGCTTGCTGCACTGTTGACTACGACACTATTGCTGGT
GGGGACAAATTTGGCAACTTGTTTCTGTTGCGTTTGCCTGAAAAAGTGTC
AGATGACGTGGACAACCCGACCGGGAACCGCGTCTTGTGGGATACGGGGC
GGTTGAATGGGGCACCAAACAAGGTGGAGGTTTTGGCGCATTTTTACGTA
GGGGAGGTTGTGACTGCGCTGCAAAAGGTGGCTCTGGTGCCGGGTGGGCA
AGAGGTCATTTTATATACGACTGTTGCGGGGACGGTCGGAGCTTTGGTCC
CTTTCTCGTCGCGGCGTTCGAAGAACACGTTCTTTTTGCTCGAGATGGAG
ATGCGGAAGGAGGCCAATTTGCACTTCAAACGTGATCATGTTGCGTACCG
TTCGTACTACGCCCCGGTCAAGGAAGTGATTGATGGTGACTTGTGCGAGC
TTTTCGGGGGTTTGCCGGTGGCGAAGCAACGGGCTGTGGCTTTAGAAGTG
TTAGATCGGACGCCGGGGGAGGTCCTGAAGTTGGTCGAGGATTTTAAGAA
TACCATTCTATAG

protein sequence of NO02G02420.1

>NO02G02420.1-protein ID=NO02G02420.1-protein|Name=NO02G02420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1271bp
MASTGIAPALSLLNLTLQRPGYIHAAVSGNFSSPKAQEVVVIRGTSYLEL
LRTDAERLKVVPVCTFNTFCNLRCLLTFRQVGTNKDYLVVGADTGRITIL
EYVVDSNEFRTVHCETFGKSACRRIVPGQYLAADPLGRAIMISAVEKQKL
VYVMNRDAGGRLTISSPLEAHKSHALVYATVGLDVGTENPIFAAIEKDYS
DADQDPTGEAAAETYKQLVYYELDLGLNHVIRKWSQPIASTALSLLAVPG
ERANGPGGVLILSENWVAYTHQDHPELRTPIPRRAGQPASRGTLLTASAM
HRQKDVLFYLLQSEYGDLYKVTLDLSEDRTKVQNINMQVFDTIPSANGLC
ITKTGLLLCASEFANHMLYQFQGIDNPEAVAADSLEEEALDDEDKLGDSS
EEAAQVAPTFTPAAKLKNLAAVDVLESLAPVTGMHVADLAGEDAAQIYTL
CGRGGRSSLRILRHGLQVSEEASSDLPGTPNAVWTIKGRQEEKHDRFIVV
SFTNATLVFSIGDQIEEVTDSGFLGTAPTLEVKLLADNAMLQVHTHGIRH
IRPGRPVNEWKTPGRKVIEQASANERQVAIALEGGDVVYFELDAAGMLME
VASKEIGLAVACLDLGPVPHGRVGSSFLAVGGYDSTVRVLSLEQVSLLTQ
RSMLQLSVRAESVCLAEMAKDGEGAGGAATASSSSSSSLFLNVGLSNGIM
QRLLLDPLEGTLSDSRQRFLGAKPVKLLRVNIEGSPAVLALSSRTWLSYN
HQGRFLQTPLSYESLDYASDFASEYITEGLVAVTGSSLRIITIQNFGNMF
NQTEVPLRYTPRQMVQVPGCSRLVLIESDHNEYNETERAFLATTEAAAAG
DSHGGAAGGGEGGEEAPEDVAAAAALAAAEGALPPPPPPEGGTEDEEEAE
GETFVRGPLPPVEGKWASCIRIVDGRTGETLELVELSLNEAAVSLATVAF
HDRGGEVFVCVGTATDLCLHPRKHSAAAIHVYRLFDNRLVLLHKTEVEDV
PKSLVELKGFGRLLAGIGHSLRMYDLGKKKLLKKCENRNLPNFIVGMQTM
SDRIYVSDVLDSVHFVKYRRAENALVVFADDTAPRAVTACCTVDYDTIAG
GDKFGNLFLLRLPEKVSDDVDNPTGNRVLWDTGRLNGAPNKVEVLAHFYV
GEVVTALQKVALVPGGQEVILYTTVAGTVGALVPFSSRRSKNTFFLLEME
MRKEANLHFKRDHVAYRSYYAPVKEVIDGDLCELFGGLPVAKQRAVALEV
LDRTPGEVLKLVEDFKNTIL*

mRNA from alignment at chr2:667723..671535-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G02420.1 ID=NO02G02420.1|Name=NO02G02420.1|organism=Nannochloropsis oceanica|type=mRNA|length=3813bp|location=Sequence derived from alignment at chr2:667723..671535- (Nannochloropsis oceanica)
ATGGCGTCGACCGGCATTGCCCCGGCGCTGAGCCTGCTGAATTTGACGCT
GCAACGACCGGGTTACATCCATGCTGCCGTATCGGGCAACTTTAGTTCGC
CCAAGGCTCAGGAGGTGGTGGTGATTCGTGGGACCAGCTACCTGGAGCTA
CTGCGCACGGACGCGGAGCGGCTTAAGGTGGTTCCTGTGTGTACGTTTAA
CACTTTTTGCAACTTACGCTGCCTCCTCACTTTTCGGCAAGTGGGAACCA
ACAAGGATTATCTGGTCGTCGGCGCAGACACGGGGCGCATCACCATCCTA
GAGTACGTCGTGGACTCGAATGAGTTCCGAACCGTACATTGCGAGACGTT
TGGAAAGTCGGCCTGTCGTCGTATCGTGCCTGGGCAGTATTTGGCGGCGG
ACCCACTGGGACGCGCCATAATGATAAGTGCGGTGGAGAAGCAAAAGCTA
GTGTATGTCATGAATCGAGACGCTGGAGGCCGGCTTACCATTTCCTCCCC
TCTGGAAGCTCACAAATCCCATGCATTAGTCTATGCAACAGTGGGGCTGG
ACGTGGGGACAGAAAACCCCATTTTTGCTGCGATAGAGAAGGATTACAGC
GATGCAGATCAGGACCCCACGGGGGAAGCAGCAGCGGAGACTTACAAGCA
GCTGGTATACTATGAGTTGGACTTGGGGTTGAACCATGTCATACGAAAGT
GGTCACAACCTATTGCATCTACGGCCTTATCTTTGCTGGCGGTGCCGGGG
GAGAGGGCCAATGGCCCGGGGGGTGTGCTGATCCTATCAGAGAATTGGGT
TGCGTACACACATCAAGACCACCCAGAGCTCCGCACACCCATCCCTCGCC
GCGCGGGACAGCCAGCTTCGAGGGGTACGCTGTTGACGGCCTCGGCGATG
CATCGGCAGAAGGACGTATTGTTTTATTTGTTGCAGTCGGAGTATGGGGA
TTTGTACAAGGTGACGTTGGATTTGAGCGAGGACCGGACGAAGGTCCAGA
ATATCAATATGCAGGTGTTTGATACAATCCCGTCGGCGAATGGGCTATGT
ATCACCAAGACGGGATTGCTTCTTTGTGCATCGGAGTTTGCAAATCACAT
GCTGTATCAGTTTCAGGGCATTGATAATCCTGAGGCCGTGGCTGCTGATT
CTTTGGAGGAGGAAGCGCTCGATGACGAGGACAAATTGGGAGATAGCTCG
GAGGAGGCTGCGCAGGTTGCTCCTACGTTTACCCCGGCGGCAAAATTGAA
GAATTTAGCGGCAGTCGATGTGTTAGAGAGCCTTGCGCCAGTCACGGGGA
TGCATGTGGCTGATTTGGCCGGGGAGGACGCAGCGCAGATTTACACGTTG
TGTGGGAGGGGGGGGAGAAGTAGCCTGAGGATTTTAAGACATGGATTGCA
GGTGTCAGAGGAGGCAAGTTCGGATTTGCCTGGGACACCGAATGCGGTTT
GGACGATCAAGGGAAGGCAGGAGGAGAAACATGATCGGTTTATTGTTGTG
TCGTTCACGAACGCCACGTTGGTATTTTCGATTGGGGATCAGATTGAGGA
AGTTACTGACTCGGGTTTTTTGGGTACGGCGCCGACGTTGGAGGTGAAGT
TGTTGGCGGATAACGCAATGTTGCAGGTGCACACGCATGGGATTCGCCAC
ATTCGGCCTGGAAGGCCTGTAAATGAGTGGAAAACCCCGGGGCGGAAAGT
GATTGAGCAGGCTTCGGCTAATGAACGACAGGTCGCTATTGCGTTGGAAG
GAGGAGATGTGGTGTACTTTGAGTTGGACGCCGCAGGAATGCTGATGGAA
GTGGCGTCGAAGGAGATCGGTTTAGCCGTGGCGTGCTTGGACTTGGGGCC
CGTGCCACATGGGAGGGTGGGGTCGAGTTTCCTGGCAGTGGGGGGGTATG
ATTCAACGGTGAGGGTTTTGTCGTTGGAGCAGGTTTCACTCTTGACGCAA
CGGAGTATGCTGCAACTGTCGGTGAGGGCCGAGTCTGTTTGTTTGGCGGA
GATGGCCAAGGATGGGGAGGGGGCAGGGGGTGCTGCGACTGCTTCTTCGT
CGTCGTCTTCCTCATTGTTTTTGAACGTAGGCCTGAGCAATGGGATTATG
CAAAGACTGCTGCTCGATCCTTTGGAAGGCACTCTCTCTGACAGTCGACA
ACGTTTCCTCGGTGCGAAACCCGTCAAGCTTCTCCGGGTCAACATCGAAG
GCAGCCCCGCCGTCCTTGCCCTCTCCTCCCGCACCTGGCTCTCCTACAAC
CATCAAGGACGTTTCCTCCAAACCCCCCTTTCCTACGAGAGCCTCGATTA
CGCCTCGGATTTTGCCTCTGAATATATCACAGAAGGTCTTGTGGCTGTCA
CAGGGAGCTCGCTCCGCATTATCACAATTCAAAATTTTGGAAATATGTTC
AACCAAACCGAGGTGCCCTTGCGGTATACCCCAAGGCAAATGGTCCAAGT
TCCAGGCTGTTCCCGCCTCGTCCTGATCGAATCTGACCACAACGAATACA
ATGAAACGGAACGCGCTTTTCTTGCCACAACGGAAGCTGCGGCTGCGGGT
GATAGTCATGGAGGAGCGGCTGGAGGAGGAGAGGGAGGCGAGGAAGCGCC
GGAGGATGTGGCGGCTGCTGCGGCGTTGGCAGCGGCGGAGGGGGCTTTGC
CTCCCCCACCGCCTCCTGAAGGAGGAACAGAAGATGAGGAAGAGGCGGAG
GGAGAGACGTTTGTGCGGGGGCCGTTGCCGCCTGTGGAGGGGAAGTGGGC
ATCGTGCATTCGCATCGTGGATGGCCGGACAGGAGAGACCTTGGAGTTGG
TGGAGTTGTCGTTGAACGAGGCGGCTGTGTCCCTGGCAACAGTGGCGTTC
CATGACAGAGGGGGGGAGGTCTTTGTATGTGTAGGGACGGCGACGGATTT
GTGTCTACACCCAAGAAAGCATAGTGCGGCGGCTATTCATGTGTATCGTT
TGTTTGATAACCGTTTGGTGTTGCTACATAAAACGGAGGTGGAAGATGTA
CCTAAGAGTCTGGTCGAATTGAAAGGATTCGGAAGGCTCCTTGCGGGTAT
AGGGCATTCCTTGCGCATGTACGACTTGGGGAAGAAGAAGCTTTTGAAGA
AGTGCGAGAATCGGAATTTGCCAAATTTCATCGTAGGGATGCAGACGATG
AGCGACCGAATTTATGTCTCTGACGTGTTAGATAGCGTGCATTTTGTCAA
ATACCGGCGGGCAGAGAATGCATTGGTGGTGTTTGCCGATGATACGGCTC
CGCGGGCGGTCACGGCTTGCTGCACTGTTGACTACGACACTATTGCTGGT
GGGGACAAATTTGGCAACTTGTTTCTGTTGCGTTTGCCTGAAAAAGTGTC
AGATGACGTGGACAACCCGACCGGGAACCGCGTCTTGTGGGATACGGGGC
GGTTGAATGGGGCACCAAACAAGGTGGAGGTTTTGGCGCATTTTTACGTA
GGGGAGGTTGTGACTGCGCTGCAAAAGGTGGCTCTGGTGCCGGGTGGGCA
AGAGGTCATTTTATATACGACTGTTGCGGGGACGGTCGGAGCTTTGGTCC
CTTTCTCGTCGCGGCGTTCGAAGAACACGTTCTTTTTGCTCGAGATGGAG
ATGCGGAAGGAGGCCAATTTGCACTTCAAACGTGATCATGTTGCGTACCG
TTCGTACTACGCCCCGGTCAAGGAAGTGATTGATGGTGACTTGTGCGAGC
TTTTCGGGGGTTTGCCGGTGGCGAAGCAACGGGCTGTGGCTTTAGAAGTG
TTAGATCGGACGCCGGGGGAGGTCCTGAAGTTGGTCGAGGATTTTAAGAA
TACCATTCTATAG

Coding sequence (CDS) from alignment at chr2:667723..671535-

>NO02G02420.1 ID=NO02G02420.1|Name=NO02G02420.1|organism=Nannochloropsis oceanica|type=CDS|length=3813bp|location=Sequence derived from alignment at chr2:667723..671535- (Nannochloropsis oceanica)
ATGGCGTCGACCGGCATTGCCCCGGCGCTGAGCCTGCTGAATTTGACGCT
GCAACGACCGGGTTACATCCATGCTGCCGTATCGGGCAACTTTAGTTCGC
CCAAGGCTCAGGAGGTGGTGGTGATTCGTGGGACCAGCTACCTGGAGCTA
CTGCGCACGGACGCGGAGCGGCTTAAGGTGGTTCCTGTGTGTACGTTTAA
CACTTTTTGCAACTTACGCTGCCTCCTCACTTTTCGGCAAGTGGGAACCA
ACAAGGATTATCTGGTCGTCGGCGCAGACACGGGGCGCATCACCATCCTA
GAGTACGTCGTGGACTCGAATGAGTTCCGAACCGTACATTGCGAGACGTT
TGGAAAGTCGGCCTGTCGTCGTATCGTGCCTGGGCAGTATTTGGCGGCGG
ACCCACTGGGACGCGCCATAATGATAAGTGCGGTGGAGAAGCAAAAGCTA
GTGTATGTCATGAATCGAGACGCTGGAGGCCGGCTTACCATTTCCTCCCC
TCTGGAAGCTCACAAATCCCATGCATTAGTCTATGCAACAGTGGGGCTGG
ACGTGGGGACAGAAAACCCCATTTTTGCTGCGATAGAGAAGGATTACAGC
GATGCAGATCAGGACCCCACGGGGGAAGCAGCAGCGGAGACTTACAAGCA
GCTGGTATACTATGAGTTGGACTTGGGGTTGAACCATGTCATACGAAAGT
GGTCACAACCTATTGCATCTACGGCCTTATCTTTGCTGGCGGTGCCGGGG
GAGAGGGCCAATGGCCCGGGGGGTGTGCTGATCCTATCAGAGAATTGGGT
TGCGTACACACATCAAGACCACCCAGAGCTCCGCACACCCATCCCTCGCC
GCGCGGGACAGCCAGCTTCGAGGGGTACGCTGTTGACGGCCTCGGCGATG
CATCGGCAGAAGGACGTATTGTTTTATTTGTTGCAGTCGGAGTATGGGGA
TTTGTACAAGGTGACGTTGGATTTGAGCGAGGACCGGACGAAGGTCCAGA
ATATCAATATGCAGGTGTTTGATACAATCCCGTCGGCGAATGGGCTATGT
ATCACCAAGACGGGATTGCTTCTTTGTGCATCGGAGTTTGCAAATCACAT
GCTGTATCAGTTTCAGGGCATTGATAATCCTGAGGCCGTGGCTGCTGATT
CTTTGGAGGAGGAAGCGCTCGATGACGAGGACAAATTGGGAGATAGCTCG
GAGGAGGCTGCGCAGGTTGCTCCTACGTTTACCCCGGCGGCAAAATTGAA
GAATTTAGCGGCAGTCGATGTGTTAGAGAGCCTTGCGCCAGTCACGGGGA
TGCATGTGGCTGATTTGGCCGGGGAGGACGCAGCGCAGATTTACACGTTG
TGTGGGAGGGGGGGGAGAAGTAGCCTGAGGATTTTAAGACATGGATTGCA
GGTGTCAGAGGAGGCAAGTTCGGATTTGCCTGGGACACCGAATGCGGTTT
GGACGATCAAGGGAAGGCAGGAGGAGAAACATGATCGGTTTATTGTTGTG
TCGTTCACGAACGCCACGTTGGTATTTTCGATTGGGGATCAGATTGAGGA
AGTTACTGACTCGGGTTTTTTGGGTACGGCGCCGACGTTGGAGGTGAAGT
TGTTGGCGGATAACGCAATGTTGCAGGTGCACACGCATGGGATTCGCCAC
ATTCGGCCTGGAAGGCCTGTAAATGAGTGGAAAACCCCGGGGCGGAAAGT
GATTGAGCAGGCTTCGGCTAATGAACGACAGGTCGCTATTGCGTTGGAAG
GAGGAGATGTGGTGTACTTTGAGTTGGACGCCGCAGGAATGCTGATGGAA
GTGGCGTCGAAGGAGATCGGTTTAGCCGTGGCGTGCTTGGACTTGGGGCC
CGTGCCACATGGGAGGGTGGGGTCGAGTTTCCTGGCAGTGGGGGGGTATG
ATTCAACGGTGAGGGTTTTGTCGTTGGAGCAGGTTTCACTCTTGACGCAA
CGGAGTATGCTGCAACTGTCGGTGAGGGCCGAGTCTGTTTGTTTGGCGGA
GATGGCCAAGGATGGGGAGGGGGCAGGGGGTGCTGCGACTGCTTCTTCGT
CGTCGTCTTCCTCATTGTTTTTGAACGTAGGCCTGAGCAATGGGATTATG
CAAAGACTGCTGCTCGATCCTTTGGAAGGCACTCTCTCTGACAGTCGACA
ACGTTTCCTCGGTGCGAAACCCGTCAAGCTTCTCCGGGTCAACATCGAAG
GCAGCCCCGCCGTCCTTGCCCTCTCCTCCCGCACCTGGCTCTCCTACAAC
CATCAAGGACGTTTCCTCCAAACCCCCCTTTCCTACGAGAGCCTCGATTA
CGCCTCGGATTTTGCCTCTGAATATATCACAGAAGGTCTTGTGGCTGTCA
CAGGGAGCTCGCTCCGCATTATCACAATTCAAAATTTTGGAAATATGTTC
AACCAAACCGAGGTGCCCTTGCGGTATACCCCAAGGCAAATGGTCCAAGT
TCCAGGCTGTTCCCGCCTCGTCCTGATCGAATCTGACCACAACGAATACA
ATGAAACGGAACGCGCTTTTCTTGCCACAACGGAAGCTGCGGCTGCGGGT
GATAGTCATGGAGGAGCGGCTGGAGGAGGAGAGGGAGGCGAGGAAGCGCC
GGAGGATGTGGCGGCTGCTGCGGCGTTGGCAGCGGCGGAGGGGGCTTTGC
CTCCCCCACCGCCTCCTGAAGGAGGAACAGAAGATGAGGAAGAGGCGGAG
GGAGAGACGTTTGTGCGGGGGCCGTTGCCGCCTGTGGAGGGGAAGTGGGC
ATCGTGCATTCGCATCGTGGATGGCCGGACAGGAGAGACCTTGGAGTTGG
TGGAGTTGTCGTTGAACGAGGCGGCTGTGTCCCTGGCAACAGTGGCGTTC
CATGACAGAGGGGGGGAGGTCTTTGTATGTGTAGGGACGGCGACGGATTT
GTGTCTACACCCAAGAAAGCATAGTGCGGCGGCTATTCATGTGTATCGTT
TGTTTGATAACCGTTTGGTGTTGCTACATAAAACGGAGGTGGAAGATGTA
CCTAAGAGTCTGGTCGAATTGAAAGGATTCGGAAGGCTCCTTGCGGGTAT
AGGGCATTCCTTGCGCATGTACGACTTGGGGAAGAAGAAGCTTTTGAAGA
AGTGCGAGAATCGGAATTTGCCAAATTTCATCGTAGGGATGCAGACGATG
AGCGACCGAATTTATGTCTCTGACGTGTTAGATAGCGTGCATTTTGTCAA
ATACCGGCGGGCAGAGAATGCATTGGTGGTGTTTGCCGATGATACGGCTC
CGCGGGCGGTCACGGCTTGCTGCACTGTTGACTACGACACTATTGCTGGT
GGGGACAAATTTGGCAACTTGTTTCTGTTGCGTTTGCCTGAAAAAGTGTC
AGATGACGTGGACAACCCGACCGGGAACCGCGTCTTGTGGGATACGGGGC
GGTTGAATGGGGCACCAAACAAGGTGGAGGTTTTGGCGCATTTTTACGTA
GGGGAGGTTGTGACTGCGCTGCAAAAGGTGGCTCTGGTGCCGGGTGGGCA
AGAGGTCATTTTATATACGACTGTTGCGGGGACGGTCGGAGCTTTGGTCC
CTTTCTCGTCGCGGCGTTCGAAGAACACGTTCTTTTTGCTCGAGATGGAG
ATGCGGAAGGAGGCCAATTTGCACTTCAAACGTGATCATGTTGCGTACCG
TTCGTACTACGCCCCGGTCAAGGAAGTGATTGATGGTGACTTGTGCGAGC
TTTTCGGGGGTTTGCCGGTGGCGAAGCAACGGGCTGTGGCTTTAGAAGTG
TTAGATCGGACGCCGGGGGAGGTCCTGAAGTTGGTCGAGGATTTTAAGAA
TACCATTCTATAG

Synonyms

Publications