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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr1 | genome | chr1:1521086..1529295 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G05540.1 vs.
Match: XP_008611471.1 (hypothetical protein SDRG_07416 [Saprolegnia diclina VS20]; EQC35187.1 hypothetical protein SDRG_07416 [Saprolegnia diclina VS20]) HSP 1 Score: 289.3 bits (739), Expect = 7.000e-74 Identity = 154/323 (47.68%), Postives = 203/323 (62.85%), Query Frame = 0
Query: 29 AYGLLGFIKLVDCYYILLITQRREVGILAGNRIYGVKAMGMFPIKEGGREGGREGGKEGGTLAQIWSLVSSKLNPTPQETAEARYVSLFQFLDLTKDYFFSYTYDLTSHLQHNMLA--------------------------ASAKTFPPPPV------------RAISLILIARRSRHFAGTRYLKRGVSDCGQVANDVEVEQIVHDEAGGGEEGALASYVQMRGSIPTYWSQETSMTAPKPPIVISRVDPTYRATEKHFADLFNRYASPICVLNLVKQRERRPRESVVGEDFRRAVEYVNGTLPWEHKIRYCALDFSSISK 314
A ++GFIK + YY++++TQRR++G + G+ IY ++A PI+ +G W+ VS LNP+P E AEARY+ LF F+DLTKD+++SYTYDLT LQHNM ASA+ P + R IS+I++ARRSRHFAGTRYLKRG++D G+VANDVE EQI+ DE G +++VQ RGSIP +W+QETS+T PKPPI ++RVDP+Y AT+ HF DLF RY SP VLNLVKQ E+ RE +VG F+ AVEY+N +P EHK+RY ALD+S +SK
Sbjct: 249 AVAIVGFIKFLQGYYLIVVTQRRKIGCIGGHFIYAIQATQCLPIRRPKSDGSS------------WTWVSRWLNPSPIEDAEARYLGLFHFVDLTKDFYYSYTYDLTHTLQHNMTTDQTKSLDMFEWNHHLNKEFTAALSSPASAEWVQPLLLGFYEQRKCSLFGRLISVIVLARRSRHFAGTRYLKRGIADTGKVANDVETEQIIEDE---NTHGKFSAFVQYRGSIPIFWAQETSVTIPKPPIQLNRVDPSYAATQAHFVDLFERYGSPTLVLNLVKQHEKVQREMIVGTGFKSAVEYINTFIPQEHKLRYVALDYSRLSK 556
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G05540.1 ID=NO01G05540.1|Name=NO01G05540.1|organism=Nannochloropsis oceanica|type=mRNA|length=4557bp
CTTTGCTCTGTCTGCCTGCCTGCCTGTATGCCCTGCTCCTCTTCTCTCCT
TATATATATATATATATGTGTGTGTGTATGTGTGTATGTGTGTGTGTGTC
CTTACCTACCAGCCTACGGCCTACTCGGCTTCATCAAGCTCGTCGACTGC
TACTACATCCTCCTCATCACGCAGCGGCGGGAAGTGGGCATTTTGGCGGG
AAACCGAATTTACGGGGTTAAGGCCATGGGCATGTTTCCCATCAAGGAGG
GGGGAAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGGGGAACGCTGGCG
CAGATCTGGTCCCTCGTGAGCAGCAAGTTGAACCCCACCCCTCAAGAAAC
GGCCGAGGCCCGTTACGTCTCCCTCTTTCAATTTCTTGACCTGACCAAGG
ACTACTTTTTTTCGTATACCTACGATTTGACGAGCCACCTGCAGCACAAC
ATGCTCGCGGCCTCGGCCAAGACCTTTCCTCCCCCCCCTGTCAGGGCTAT
CTCCCTCATCCTCATCGCCCGCCGCTCGCGCCATTTTGCCGGAACTCGCT
ACCTGAAACGAGGCGTAAGCGACTGTGGACAGGTGGCCAACGACGTGGAG
GTGGAGCAGATCGTGCATGATGAGGCGGGAGGGGGGGAGGAAGGGGCGCT
GGCGTCCTACGTCCAGATGCGTGGCTCTATCCCCACCTACTGGAGCCAGG
AGACCTCCATGACAGCTCCCAAGCCACCCATCGTCATCTCACGCGTCGAC
CCGACCTACCGCGCCACGGAGAAACATTTTGCCGACCTCTTCAACCGTTA
CGCCTCCCCGATCTGCGTCCTCAACCTCGTCAAACAACGAGAGCGTCGTC
CGCGAGAGAGCGTGGTGGGCGAGGATTTTCGTCGGGCCGTTGAATACGTC
AACGGCACCCTCCCCTGGGAACACAAGATCCGCTACTGTGCGTTGGACTT
TTCTTCAATCAGCAAATACGGCAGCAGCAGCAGCAGCAGCAGCAGCCACC
AGCAGTTCCATCACAACCCGGCTGGCCACGGGCGTCCTTCCTCCAGCCCT
GGGAAGCGAGGAGGAGGGAGGGAAGGAGGGAAGGAGCGGAAGGGAGGGCA
GAGCAAGACGCCCAGCAATCTGCTCTTGCAGGCATTGGAGGATGTCTCTT
GCTGGGCCCTCGACCAAACCGGCATCTTCTGCTCCAACCTAAGCCCAACG
CTTCCGCCCGCCCGAGGCCTCCGCCTTCTCTCTCCTCCTCCTCCCCCTCC
TCCTCCTCCTCCTCGTCGTCTCCGTCCTCCTTCAGCTCCTCAACCGTTCT
CCCCCCCCCGACACCGACGATCCTCCGTCACCGAGGACGAGAAGGACGAG
GACGAGGGCGGGAGGGAGGAGGTGGCGCAAGGCCCTTATCCCGTCCTCTC
TCGGGGCCCCTCTTGGTCAGCTGCTTCCTCCTCCTCCTCCACCTCCTCCC
TCTCCTCCTCTTCCGTCTTCGGCTTGGCCTACAGAGACAGGAATAGGAGC
AGGACGGCCTTCTCCCTGGACGCATGGGAGGAGAAAGAAGAAGAAGGACG
GGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGGGGAAGATGGAAGAAGGCGAAGCAGGAGGGAGGA
CGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTCCCAT
CCCCTCCTTCTCTTTCTCCGCGCGACCGCGCATTCACCGACTGGAGCAAC
GAGGCGTCCTCCGGACCAACTGTATCGACTCTCTCGACCGCACTAATGTG
GCTCAGTTCATGGTCGGCATCCAGGCTTTGGGGCGTCAGCTGGCGGCCCT
GGGGTTGCTGCCCCCCGCGGATGGAGGGCGCTTGGAGGCCGGCTCCCCTC
TGGCCGTGATCTTCATGGAGATGTTCACGCATGTCGGCGACGCCCTGGCC
CTCCAGTACGGGGGCAGCGGGACCAACAAGCGCGTGGGCGAGAAGGAGGA
AGGGAGGGAGGAAGGCGGCGGCTCGGCCACCGGCCTGAACAAGCACCGGG
AGCTGCTGACCACCATCCGTCGGTACTACTCCAATGCCTTCACCGACCAG
GCCAAGCAAGATGCCATGAACCTCTTCCTCGGACACTTCATCCCCGCCCA
GCACGACACTGCCCTCTGGGAGCTCGAAAACGATTACTTCCTCCATAACA
CCCACGTCAAGTCCGGGGGCCTGGTCGCGCAACGGTTGTATCAACAGCGC
ATGCACGCCGAGAGGTCAGATGACGAAGAAGCCGAGGAAACGGAACAAGC
AGCAGCAGCAGCAGCAGTACGACAAACATCTCTCTCATCATCATCATTAT
TATCATCATCATCATCAGCCGCATCAGTAGCAGCAGCAGCAGCGGCCGCG
GCAGCATCCGTAGGACTGGAAGAGGAGGTCGGGGAGGAAGAGGAGGAAGG
GAGGGAGGAATGGAGGGAGGAAGGGAAGGAGGACTATCACCCTCTGGATC
AAGACGCCGCCACACGAGCACAGGCGGCTCAAAGGCAGCTTCATCTCGCC
CTGCTCAAGCGCCGTGTCCGTCGTCGGTGCCTGAGGCAGATGGGGGAGCT
CTCGGCGTGGTGGCGGGAAGCTTTGGAGGGGTATGAGAATAAGAGGAGGT
GGATGCAGCTTGCCCCGCCCCTGGGAGGAGTAGGACGACTGCCGTCACGG
TTCACTCAGCTCTACCCCTCCCGAGACCTGACCGAATTTGACGCCCTCCT
CGCCCACGACTTTGCCATCCCAATCCCTGTCATCCTCTATGCTCAGGTAG
GGACAAGAGCGGCTCATGAGGGAGGGGGGGTGGGAAGGAGGATGGGAGGG
GGACCGTGGCTAGGGATGGAGGGAGGGGCGGAGGTGAGGGTGGTGACATA
CCTATTGACTCTGTTGGAGGAGGCGGTGATTGAGGAGGAGGGAGGGAGGG
AGAAGGGAAAGGGGAAGGGAGGGAAGGAGGAGGAAGAGAGGAAGGCGAAA
GGGAAGCTGCCGCAATCACAGCAACAGCAGCAATGGCAGCAGCGGCAGCA
GCAGTCACAGCAGCAGCAGCAGTCACAGCAGGAGCCGCCATGGCAGCAGC
AGCGGAGGGGTAGCAGAACTAACACGGGAAGGACTTTCGGGCGAGTGCTG
GCCCCCACATTGGAAGAGGGGGAGGACGAATTGGAGGACGAGGAAAGGAA
GGAAGAAGGGAGGGAGGGAGGGAGGGAGGGAAGGGGGGAGAGAGGGAGAA
CATTGTCGTATGAGGACTTCGTAACGATGTCCTCTTCGTTGATGGGAAGG
AAGAAAGGAAAGGGAGGGAAGGAGGGAAGGGGAGAGGAGGAGATGGGGGA
GGAAAAAGCGCTAGGCGAGAAGAGGGAAGGAGGGAGGGAGGGAGGGAGAG
AGGATCGACCACCGATGGATGTCTTGACGGCTTGCCTTCTCGGAGGCCCG
GAATGGCGACAATCCCTGTCCTCTCTCTTGCTCCTGGAGGAGCATGAAGA
CCACAGCAGCACCGCCGATCCACCTCTCGCCCTCCCTCTCGCCCTCCCAC
CCGGCGAGGAACCGCAGGCCTTGCCAGCCCCCGAGAAGAAAGAAGAAGAA
GAGGCAGCAGAAGCAAAAAGAGAAGGAGGAGAAGAGGAAAATGAAGAGAT
CGACCGTCGCATCGCTGCAATGCATCCACTGCTCCCTCCCTCCGAGTGGT
GCAGTCAGAGCGACACCTCCCTCCCTCCGTCCGTTCCCCCGGGGGAAGGG
CTGCTGGCGTTGTTGGAGGAGCAGGTAAAAGGTTGTAGGGAGGAGGGTGA
ATGGTATCGAATGTACCTTGATCCTGCGTCGATTAGTGCCGCTAGGAGTA
GCCTGTGTGGGGAGGAGTCGGAGAGGTTGTACAGGGAGACGGTGAGGGGG
GGGAGGAGGAGGGGGGAGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GGTTAGAGGTGGAGGAAGAAGAGGAAGAAGGGAGGCGTGTGCCGGTGTGG
GTGCTGCATCCGTCCTCGTCCTCTTCCTTGGCTTCGTCGTGGAGGACGGG
AGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGTGCGAAAGAC
GGCGATGGAGCAGTGCTGGCTTCCTAGCACCTCCTGGTCGGCCTCGAGTC
TGACCAGCCTTGGATCAGCGACAGAGGAAGACGTCGCCCTCGCCCTGGGC
CCGGACTTGTTCTCATCGGGAATGGGAATGAAAGGAGGGGGGAGTGGGTG
GGGTGGAAAAAGGAAGGGGGGGCGGAGAGAGGAGGAGGAGGAGAGTAGTG
ATGAGGAGGTGGAGGTGGAGTTGGAAGGAGGGAGGGAGAGAGGGATTGAG
GAGGGGTTGATCCAGGTAAAGCAGGATGAGTACGTGAGCAGTGATAATCC
CTTTATGCTCTTCAATAAGGCCGGGGCCATTGGACCGCATTGCCTCCCAT
CGATGCGAGGAGGGGAGGGAGGGATGGAGGAAGAAGAAGGAGGAGGAGGA
GAGGTGCTGGTTGGTGGTGTGAGTGCGCTCTTGTTTCGAGGGCGAAAGGG
GAAATGA back to topprotein sequence of NO01G05540.1 >NO01G05540.1-protein ID=NO01G05540.1-protein|Name=NO01G05540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1510bp
MPCSSSLLIYIYICVCVCVYVCVCPYLPAYGLLGFIKLVDCYYILLITQR
REVGILAGNRIYGVKAMGMFPIKEGGREGGREGGKEGGTLAQIWSLVSSK
LNPTPQETAEARYVSLFQFLDLTKDYFFSYTYDLTSHLQHNMLAASAKTF
PPPPVRAISLILIARRSRHFAGTRYLKRGVSDCGQVANDVEVEQIVHDEA
GGGEEGALASYVQMRGSIPTYWSQETSMTAPKPPIVISRVDPTYRATEKH
FADLFNRYASPICVLNLVKQRERRPRESVVGEDFRRAVEYVNGTLPWEHK
IRYCALDFSSISKYGSSSSSSSSHQQFHHNPAGHGRPSSSPGKRGGGREG
GKERKGGQSKTPSNLLLQALEDVSCWALDQTGIFCSNLSPTLPPARGLRL
LSPPPPPPPPPPRRLRPPSAPQPFSPPRHRRSSVTEDEKDEDEGGREEVA
QGPYPVLSRGPSWSAASSSSSTSSLSSSSVFGLAYRDRNRSRTAFSLDAW
EEKEEEGRGGGGGGGGGGGGGGGGGGGGGGGRWKKAKQEGGREGGREGGR
EGGREGPIPSFSFSARPRIHRLEQRGVLRTNCIDSLDRTNVAQFMVGIQA
LGRQLAALGLLPPADGGRLEAGSPLAVIFMEMFTHVGDALALQYGGSGTN
KRVGEKEEGREEGGGSATGLNKHRELLTTIRRYYSNAFTDQAKQDAMNLF
LGHFIPAQHDTALWELENDYFLHNTHVKSGGLVAQRLYQQRMHAERSDDE
EAEETEQAAAAAAVRQTSLSSSSLLSSSSSAASVAAAAAAAAASVGLEEE
VGEEEEEGREEWREEGKEDYHPLDQDAATRAQAAQRQLHLALLKRRVRRR
CLRQMGELSAWWREALEGYENKRRWMQLAPPLGGVGRLPSRFTQLYPSRD
LTEFDALLAHDFAIPIPVILYAQVGTRAAHEGGGVGRRMGGGPWLGMEGG
AEVRVVTYLLTLLEEAVIEEEGGREKGKGKGGKEEEERKAKGKLPQSQQQ
QQWQQRQQQSQQQQQSQQEPPWQQQRRGSRTNTGRTFGRVLAPTLEEGED
ELEDEERKEEGREGGREGRGERGRTLSYEDFVTMSSSLMGRKKGKGGKEG
RGEEEMGEEKALGEKREGGREGGREDRPPMDVLTACLLGGPEWRQSLSSL
LLLEEHEDHSSTADPPLALPLALPPGEEPQALPAPEKKEEEEAAEAKREG
GEEENEEIDRRIAAMHPLLPPSEWCSQSDTSLPPSVPPGEGLLALLEEQV
KGCREEGEWYRMYLDPASISAARSSLCGEESERLYRETVRGGRRRGEEGG
GGGGGGGGVRGGGRRGRREACAGVGAASVLVLFLGFVVEDGRKGGREGGR
EGGGVRKTAMEQCWLPSTSWSASSLTSLGSATEEDVALALGPDLFSSGMG
MKGGGSGWGGKRKGGRREEEEESSDEEVEVELEGGRERGIEEGLIQVKQD
EYVSSDNPFMLFNKAGAIGPHCLPSMRGGEGGMEEEEGGGGEVLVGGVSA
LLFRGRKGK* back to topmRNA from alignment at chr1:1521086..1529295+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G05540.1 ID=NO01G05540.1|Name=NO01G05540.1|organism=Nannochloropsis oceanica|type=mRNA|length=8210bp|location=Sequence derived from alignment at chr1:1521086..1529295+ (Nannochloropsis oceanica)
CTTTGCTCTGTCTGCCTGCCTGCCTGTATGCCCTGCTCCTCTTCTCTCCT
TATATATATATATATATGTGTGTGTGTATGTGTGTATGTGTGTGTGTGTC
CTTACCTACCAGCCTACGGCCTACTCGGCTTCATCAAGCTCGTCGACTGC
TACTACATCCTCCTCATCACGCAGCGGTACGTCCCTTCCTCCTTCCTTCC
CTCCCTCCCCCTCTCCCCCTACCTGCTACCTCCTCACAGTTCTTCCCTCC
CCTCCCTCCCTCCCCCCTTCCCTCCCCCCTCCCAGGCGGGAAGTGGGCAT
TTTGGCGGGAAACCGAATTTACGGGGTTAAGGCCATGGGCATGTTTCCCA
TCAAGGAGGGGGGAAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGGGGA
ACGCTGGCGCAGATCTGGTAGGTTGTTGGCGGAGAGAAGGGAGGGAGGGA
GGGAGGGAGGAAGGGAGGGATGGGCTGTGATCGTCACTCGCATCCCCTCT
TCTCCCTAACTCTGCACCCTCCCTCCCTCCCCTTCGCTTCCTTCCTTCCT
CGCCCCTCTCCCTCCCTCCGCAGGTCCCTCGTGAGCAGCAAGTTGAACCC
CACCCCTCAAGAAACGGCCGAGGCCCGTTACGTCTCCCTCTTTCAATTTC
TTGACCTGACCAAGGACTACTTTTTTTCGTATACCTGTGAGGAAGAAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGATGCCAGACTTATTTTGTTGGCCACTATTAGGACCCACGTGG
CTTGGCTTGCTCTTCTCAAACATCTCGAAAACAACTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCTAGACGATTTGACGAGCCACCTGCAGCACAACAT
GCTCGCGGCCTCGGCCAAGACCTTTCCTCCCCCCCCTGTCAGGTAGGGAG
GGAGGGAGGGTGGGAGGGAGAGAGGGAGGGATGGGTAGGAGGCAACATCC
AACTCGTTCATGTGTCTTCTCCCTCCTTCCCTCTTTCCCTCCCTCCCCCC
TCCCTCCCTCCCTCCCTCTCAGGATATGCACATGTGGAACCACCATCTCC
TCTCCGCCTTCCTCCCCCTCCTCCCCTCCCCCTCTCCTCCTTCCTCTTCA
CCCTCCCCCTCATCCACGGTGCCTACATCCAACGCCGATGCTCCCTCTTC
GGGAGGGCTATCTCCCTCATCCTCATCGCCCGCCGCTCGCGCCATTTTGC
CGGAACTCGCTACCTGAAACGAGGCATGTTCCCTCCTCCCTTCCTCCCTC
CCTCTCTCCCTCCCTCCCTCCTTCCTTTTTGTTCATGCCAACGTGAATGA
CCGATGTAGCACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCT
GGTGCCCAGGCGTAAGCGACTGTGGACAGGTGGCCAACGACGTGGAGGTG
GAGCAGATCGTGCATGATGAGGCGGGAGGGGGGGAGGAAGGGGCGCTGGC
GTCCTACGTCCAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGA
GGTGGATGGATGTTTCCCAGTCGTTTTTATTGGCGTCTTGGATGTCTTTT
GCAAGCGTGTATATGCGCTTGAGTGGAGATCGTTCCCTTGTTATATTCGG
TAACCCCTCTCCCTCCCTCCTTCCCTCCTTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTAGATGCGTGGCTCTATCCCCACCTACTGGAGCCAGGAGACCT
CCATGACAGCTCCCAAGCCACCCATCGTCATCTCACGGTAAGAGGGGGGG
AGGGAGGGAGGGAGGGAGGGAGGGGGGGTACGACCCGACCTGCACACGTC
ATCCTCCAGCAACCCTCACGTGCACTCTGCCCTTTCATTGTCCGTCTCCC
CATTCCCCTCCCTCCCCCTCTCCCTCTCCCAGCGTCGACCCGACCTACCG
CGCCACGGAGAAACATTTTGCCGACCTCTTCAACCGTTACGCCTCCCCGA
TCTGCGTCCTCAACCTCGTCAAACAACGGTCCTCCCTCCCTCCTTCCCTC
CCTCCTTCCCTCCCTCCCTCTCTCCCTCCCTCCGTCCGGCTCACCCCTCC
CCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCTTGCCTCAGAGA
GCGTCGTCCGCGAGAGAGCGTGGTGGGCGAGGATTTTCGTCGGGCCGTTG
AATACGTCAACGGCACCCTCCCCTGGGAACACAAGGTACTCCCTCCCTCC
CCTCCCTCCCTCCCTCCCCTCCCTCCCCTCCCTCCCTCCCTCCCTTTCTT
CCTCCCTTCCTCCCTCCAATTCTCCGTTCATGCCGTCCTGCTCGGTCATT
TTGGCTTTCTCCCTGATCCCTCCCTCCCTCCCTCCTTCCCCCCCTCCCGT
CCCTAGATCCGCTACTGTGCGTTGGACTTTTCTTCAATCAGCAAATACGG
CAGCAGCAGCAGCAGCAGCAGCAGCCACCAGCAGTTCCATCACAACCCGG
CTGGCCACGGGCGTCCTTCCTCCAGCCCTGGGAAGCGAGGAGGAGGGAGG
GAAGGAGGGAAGGAGCGGAAGGGAGGGCAGAGCAAGACGCCCAGCAATCT
GCTCTTGCAGGCATTGGAGGATGTAGGTGGCGAGGGAGGGAGGGAGGGAG
GGAGGGGGGAGGGAGGGAGGGAGAGGGGGGGAGCAGATGAATGTGATGTA
GTTGATGATTTTAAGCGCCCACTCCCTCCCTCCCTCCCTCTCTCCCTCCC
TTCATCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCAGGTCTCTTGCTGGG
CCCTCGACCAAACCGGCATCTTCTGCTCCAACCTAAGGTGCACCCTTCCC
TCCCTCCCTCCCTCCCTCCCTCCTACTTTCGTTTTCTCACCCCCCCTCTT
CCCCCCTCGCCAGCCCAACGCTTCCGCCCGCCCGAGGCCTCCGCCTTCTC
TCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCGTCGTCTCCGTCCTCC
TTCAGCTCCTCAACCGTTCTCCCCCCCCCGACACCGACGATCCTCCGTCA
CCGAGGACGAGAAGGACGAGGACGAGGGCGGGAGGGAGGAGGTGGCGCAA
GGCCCTTATCCCGTCCTCTCTCGGGGCCCCTCTTGGTCAGCTGCTTCCTC
CTCCTCCTCCACCTCCTCCCTCTCCTCCTCTTCCGTCTTCGGCTTGGCCT
ACAGAGACAGGAATAGGAGCAGGACGGCCTTCTCCCTGGACGCATGGGAG
GAGAAAGAAGAAGAAGGACGGGGAGGGGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAAGATGGAAGA
AGGCGAAGCAGGAGGGAGGACGGGAAGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGTCCCATCCCCTCCTTCTCTTTCTCCGCGCGACCGCG
CATTCACCGACTGGAGCAACGAGGCGTCCTCCGGACCAACTGTATCGACT
CTCTCGACCGGTGCGTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTATCCCACTCCCTCCCTCCCTCCCTGCCTATC
CCCTCCCTCCCTCCCTCCCTCCCTCCCTGCCTATCCCCCTCCCTCCCTCC
CTCCCTCCCCCCTCCCCCCCTCTCTAGCACTAATGTGGCTCAGTTCATGG
TCGGCATCCAGGCTTTGGGGCGTCAGCTGGCGGCCCTGGGGTTGCTGCCC
CCCGCGGATGGAGGGCGCTTGGAGGTGAGAAAAGAGGGAGGGAGGGAGGG
AGGCGGAATCTTCCGGGGGATCTCGCCATTTTCGTTATCGTCACTCCCAC
GTCCTCCCTCCCTCCCTCCCTCAGGCCGGCTCCCCTCTGGCCGTGATCTT
CATGGAGATGTTCACGCATGTCGGCGACGCCCTGGCCCTCCAGTACGGGG
GCAGCGGGACCAACAAGCGCGTGGGCGAGAAGGAGGAAGGGAGGGAGGAA
GGCGGTAAGGAGGGTGGAAGGGAAAAGGACGGCTGGTGAGGGGAGAGATT
AATGGAGGCTCTGTCTTCGCGCATTTGGTCCATCCATTCCTCGCTCCCTC
CCTTCCTTCCACCACGGCACCTCAAGAAGCACTGCGACTTGGACTCACCG
CCCCTCCCTCCCTCCCGCCCTCCCCCCCGCCAGGCGGCTCGGCCACCGGC
CTGAACAAGCACCGGGAGCTGCTGACCACCATCCGTCGGTACTACTCCAA
TGCCTTCACCGACCAGGCCAAGCAAGATGCCATGAACCTCTTCCTCGGTC
CGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCC
CTCCCTCCCCCCGTCCGGCCTCCCCTGGTCAACGACGCCTTGCTCTCCCC
CTCCGTCTCTCCCTCCGTCCCTCCTCCCCTCCCCTCCCCGCCTTCCTCCC
TCACTGCCTCGGCTTCTCAGCGTTCATCACAACCGTCCAACGCATCACCC
TACTCGACCTCCCTCCCTCCCTCCCCCCCGCCAGGACACTTCATCCCCGC
CCAGCACGACACTGCCCTCTGGGAGCTCGAAAACGATTACTTCCTCCATA
ACACCCACGTCAAGGTGAGGGAGGGAGGGAAGGAGGGCTTGAGTCGACAG
ACCTGTCTCTCTGTCAATGCTGCCATCAATTCACACGAAGAATTCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTTCCTCTCAAGTCCGGGGGCCTGGTCGCGCAACGGTTGTATCAACAGC
GCATGCACGCCGAGAGGTCAGATGACGAAGAAGCCGAGGAAACGGAACAA
GCAGCAGCAGCAGCAGCAGTACGACAAACATCTCTCTCATCATCATCATT
ATTATCATCATCATCATCAGCCGCATCAGTAGCAGCAGCAGCAGCGGCCG
CGGCAGCATCCGTAGGACTGGAAGAGGAGGTCGGGGAGGAAGAGGAGGAA
GGGAGGGAGGAATGGAGGGAGGAAGGGAAGGAGGACTATCACCCTCTGGA
TCAAGACGCCGCCACACGAGCACAGGCGGCTCAAAGGTCGGAACATATAC
TCATTGATTGTTTCCTTCCCTCTTTCCCCTCCCCTCCCTCCCTCCCTTCC
CTTCCTCCTTCCCTATTTCCCTCCTCTCTCCCCTCCCTCACATCCCACAT
CGCCACCCTACCATTCGCCCCCCCCTCTCCCTCTCTCCCTTCCTCCCCCC
CCCTCCTCCTTCCTTTTCCTTTCCCAGGCAGCTTCATCTCGCCCTGCTCA
AGCGCCGTGTCCGTCGTCGGTGCCTGAGGCAGATGGGGGAGCTCTCGGCG
TGGTGGCGGGAAGCTTTGGAGGGGTATGAGAATAAGAGGAGGTGGATGCA
GCTTGCCCCGCCCCTGGGAGGAGTAGGACGACTGCCGTCACGGTCAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAAC
ACTCAATGCCCTCTCCCTAGTACTCTCTTCTGACCATGAACCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGTTCACTCAG
CTCTACCCCTCCCGAGACCTGACCGAATTTGACGCCCTCCTCGCCCACGA
CTTTGCCATCCCAATCCCTGTCATCCTCTATGCTCAGGTAGGTATGCACG
CCTAGCTGGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCGCCCTGTAGCGGTTGCCGTGTCCATTCCCGTCATCCTC
AATGACCTCCACCGACCAAAATAGCAGGGAGCTCGTCACCGCCGCGCCCT
CTCCACCTCTCCCCTCCTCCTCCACCCCCCGCCCCCCCTGCCTCCCCCCT
CCCTCCCTTCCTCCTTCCCTCTCTTCCTCCCCCGTCGGCTCCCCCCTCTT
CCTCAACCGTGTTGTGAAGGGCCTCGGCCTCAAAGCCCGGGACATGCTCC
TCCTCGGGCACCGCCTCTCCTCCGGCCATCCCCCCTCCCCTCCTCCCCTC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCACCCCCATCACCTCC
CAAGAAGCCTTCCTCCATTCCTACGTCCTGCTTCCCTCCTTCTCCCTCCC
CCTCGCCATCCCCCCCCCTAACCACGCGCCCACCGAGCGGGAGTACCAGA
GGCTCCTCCTTCCCTTCCTCCTCTCCCCTGATGACGCCAAGGGACAAGAG
CGGCTCATGAGGGAGGGGGGGTGGGAAGGAGGATGGGAGGGGGACCGTGG
CTAGGGATGGAGGGAGGGGCGGAGGTGAGGGTGGTGACATACCTATTGAC
TCTGTTGGAGGAGGCGGTGATTGAGGAGGAGGGAGGGAGGGAGAAGGGAA
AGGGGAAGGGAGGGAAGGAGGAGGAAGAGAGGAAGGCGAAAGGGAAGCTG
CCGCAATCACAGCAACAGCAGCAATGGCAGCAGCGGCAGCAGCAGTCACA
GCAGCAGCAGCAGTCACAGCAGGAGCCGCCATGGCAGCAGCAGCGGAGGG
GTAGCAGAACTAACACGGGAAGGACTTTCGGGCGAGTGCTGGCCCCCACA
TTGGAAGAGGGGGAGGACGAATTGGAGGACGAGGAAAGGAAGGAAGAAGG
GAGGGAGGGAGGGAGGGAGGGAAGGGGGGAGAGAGGGAGAACATTGTCGT
ATGAGGACTTCGTAACGATGTCCTCTTCGTTGATGGGAAGGAAGAAAGGA
AAGGGAGGGAAGGAGGGAAGGGGAGAGGAGGAGATGGGGGAGGAAAAAGC
GCTAGGCGAGAAGAGGGAAGGAGGGAGGGAGGGAGGGAGAGAGGATCGAC
CACCGATGGATGTCTTGACGGCTTGCCTTCTCGGAGGCCCGGAATGGCGA
CAATCCCTGTCCTCTCTCTTGCTCCTGGAGGAGCATGAAGACCACAGCAG
CACCGCCGATCCACCTCTCGCCCTCCCTCTCGCCCTCCCACCCGGCGAGG
AACCGCAGGCCTTGCCAGCCCCCGAGAAGAAAGAAGAAGAAGAGGCAGCA
GAAGCAAAAAGAGAAGGAGGAGAAGAGGAAAATGAAGAGATCGACCGTCG
CATCGCTGCAATGCATCCACTGCTCCCTCCCTCCGAGTGGTGCAGTCAGA
GCGACACCTCCCTCCCTCCGTCCGTTCCCCCGGGGGAAGGGCTGCTGGCG
TTGTTGGAGGAGCAGGTAAAAGGTTGTAGGGAGGAGGGTGAATGGTATCG
AATGTACCTTGATCCTGCGTCGATTAGTGCCGCTAGGAGTAGCCTGTGTG
GGGAGGAGTCGGAGAGGTTGTACAGGGAGACGGTGAGGGGGGGGAGGAGG
AGGGGGGAGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGTTAGAGG
TGGAGGAAGAAGAGGAAGAAGGGAGGCGTGTGCCGGTGTGGGTGCTGCAT
CCGTCCTCGTCCTCTTCCTTGGCTTCGTCGTGGAGGACGGGAGGAAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGTGCGAAAGACGGCGATGGA
GCAGTGCTGGCTTCCTAGGTAAAAGCGACCATAGCGACAGCACCCTTCAG
CCCTTATCGTCTTCCTCTGCCTCCTCGCCCTCTGCCGGCCATGCCCCATC
TCCGCCGTCTGCCCGCCCGCCCTCCCTTAGCACCTCCTGGTCGGCCTCGA
GTCTGACCAGCCTTGGATCAGCGACAGAGGAAGACGTCGCCCTCGCCCTG
GGCCCGGACTTGTTCTCATCGGGAATGGGAATGAAAGGAGGGGGGAGTGG
GTGGGGTGGAAAAAGGAAGGGGGGGCGGAGAGAGGAGGAGGAGGAGAGTA
GTGATGAGGAGGTGGAGGTGGAGTTGGAAGGAGGGAGGGAGAGAGGGATT
GAGGAGGGGTTGATCCAGGTAAAGCAGGATGAGTACGTGAGCAGTGATAA
TCCCTTTATGCTCTTCAATAAGGCCGGGGCCATTGGACCGCATTGCCTCC
CATCGATGCGAGGAGGGGAGGGAGGGATGGAGGAAGAAGAAGGAGGAGGA
GGAGAGGTGCTGGTTGGTGGTGTGAGTGCGCTCTTGTTTCGAGGGCGAAA
GGGGAAATGA back to topCoding sequence (CDS) from alignment at chr1:1521086..1529295+ >NO01G05540.1 ID=NO01G05540.1|Name=NO01G05540.1|organism=Nannochloropsis oceanica|type=CDS|length=4530bp|location=Sequence derived from alignment at chr1:1521086..1529295+ (Nannochloropsis oceanica)
ATGCCCTGCTCCTCTTCTCTCCTTATATATATATATATATGTGTGTGTGT
ATGTGTGTATGTGTGTGTGTGTCCTTACCTACCAGCCTACGGCCTACTCG
GCTTCATCAAGCTCGTCGACTGCTACTACATCCTCCTCATCACGCAGCGG
CGGGAAGTGGGCATTTTGGCGGGAAACCGAATTTACGGGGTTAAGGCCAT
GGGCATGTTTCCCATCAAGGAGGGGGGAAGGGAGGGAGGGAGGGAGGGAG
GGAAGGAGGGGGGAACGCTGGCGCAGATCTGGTCCCTCGTGAGCAGCAAG
TTGAACCCCACCCCTCAAGAAACGGCCGAGGCCCGTTACGTCTCCCTCTT
TCAATTTCTTGACCTGACCAAGGACTACTTTTTTTCGTATACCTACGATT
TGACGAGCCACCTGCAGCACAACATGCTCGCGGCCTCGGCCAAGACCTTT
CCTCCCCCCCCTGTCAGGGCTATCTCCCTCATCCTCATCGCCCGCCGCTC
GCGCCATTTTGCCGGAACTCGCTACCTGAAACGAGGCGTAAGCGACTGTG
GACAGGTGGCCAACGACGTGGAGGTGGAGCAGATCGTGCATGATGAGGCG
GGAGGGGGGGAGGAAGGGGCGCTGGCGTCCTACGTCCAGATGCGTGGCTC
TATCCCCACCTACTGGAGCCAGGAGACCTCCATGACAGCTCCCAAGCCAC
CCATCGTCATCTCACGCGTCGACCCGACCTACCGCGCCACGGAGAAACAT
TTTGCCGACCTCTTCAACCGTTACGCCTCCCCGATCTGCGTCCTCAACCT
CGTCAAACAACGAGAGCGTCGTCCGCGAGAGAGCGTGGTGGGCGAGGATT
TTCGTCGGGCCGTTGAATACGTCAACGGCACCCTCCCCTGGGAACACAAG
ATCCGCTACTGTGCGTTGGACTTTTCTTCAATCAGCAAATACGGCAGCAG
CAGCAGCAGCAGCAGCAGCCACCAGCAGTTCCATCACAACCCGGCTGGCC
ACGGGCGTCCTTCCTCCAGCCCTGGGAAGCGAGGAGGAGGGAGGGAAGGA
GGGAAGGAGCGGAAGGGAGGGCAGAGCAAGACGCCCAGCAATCTGCTCTT
GCAGGCATTGGAGGATGTCTCTTGCTGGGCCCTCGACCAAACCGGCATCT
TCTGCTCCAACCTAAGCCCAACGCTTCCGCCCGCCCGAGGCCTCCGCCTT
CTCTCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCGTCGTCTCCGTCC
TCCTTCAGCTCCTCAACCGTTCTCCCCCCCCCGACACCGACGATCCTCCG
TCACCGAGGACGAGAAGGACGAGGACGAGGGCGGGAGGGAGGAGGTGGCG
CAAGGCCCTTATCCCGTCCTCTCTCGGGGCCCCTCTTGGTCAGCTGCTTC
CTCCTCCTCCTCCACCTCCTCCCTCTCCTCCTCTTCCGTCTTCGGCTTGG
CCTACAGAGACAGGAATAGGAGCAGGACGGCCTTCTCCCTGGACGCATGG
GAGGAGAAAGAAGAAGAAGGACGGGGAGGGGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAAGATGGA
AGAAGGCGAAGCAGGAGGGAGGACGGGAAGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGTCCCATCCCCTCCTTCTCTTTCTCCGCGCGACC
GCGCATTCACCGACTGGAGCAACGAGGCGTCCTCCGGACCAACTGTATCG
ACTCTCTCGACCGCACTAATGTGGCTCAGTTCATGGTCGGCATCCAGGCT
TTGGGGCGTCAGCTGGCGGCCCTGGGGTTGCTGCCCCCCGCGGATGGAGG
GCGCTTGGAGGCCGGCTCCCCTCTGGCCGTGATCTTCATGGAGATGTTCA
CGCATGTCGGCGACGCCCTGGCCCTCCAGTACGGGGGCAGCGGGACCAAC
AAGCGCGTGGGCGAGAAGGAGGAAGGGAGGGAGGAAGGCGGCGGCTCGGC
CACCGGCCTGAACAAGCACCGGGAGCTGCTGACCACCATCCGTCGGTACT
ACTCCAATGCCTTCACCGACCAGGCCAAGCAAGATGCCATGAACCTCTTC
CTCGGACACTTCATCCCCGCCCAGCACGACACTGCCCTCTGGGAGCTCGA
AAACGATTACTTCCTCCATAACACCCACGTCAAGTCCGGGGGCCTGGTCG
CGCAACGGTTGTATCAACAGCGCATGCACGCCGAGAGGTCAGATGACGAA
GAAGCCGAGGAAACGGAACAAGCAGCAGCAGCAGCAGCAGTACGACAAAC
ATCTCTCTCATCATCATCATTATTATCATCATCATCATCAGCCGCATCAG
TAGCAGCAGCAGCAGCGGCCGCGGCAGCATCCGTAGGACTGGAAGAGGAG
GTCGGGGAGGAAGAGGAGGAAGGGAGGGAGGAATGGAGGGAGGAAGGGAA
GGAGGACTATCACCCTCTGGATCAAGACGCCGCCACACGAGCACAGGCGG
CTCAAAGGCAGCTTCATCTCGCCCTGCTCAAGCGCCGTGTCCGTCGTCGG
TGCCTGAGGCAGATGGGGGAGCTCTCGGCGTGGTGGCGGGAAGCTTTGGA
GGGGTATGAGAATAAGAGGAGGTGGATGCAGCTTGCCCCGCCCCTGGGAG
GAGTAGGACGACTGCCGTCACGGTTCACTCAGCTCTACCCCTCCCGAGAC
CTGACCGAATTTGACGCCCTCCTCGCCCACGACTTTGCCATCCCAATCCC
TGTCATCCTCTATGCTCAGGTAGGGACAAGAGCGGCTCATGAGGGAGGGG
GGGTGGGAAGGAGGATGGGAGGGGGACCGTGGCTAGGGATGGAGGGAGGG
GCGGAGGTGAGGGTGGTGACATACCTATTGACTCTGTTGGAGGAGGCGGT
GATTGAGGAGGAGGGAGGGAGGGAGAAGGGAAAGGGGAAGGGAGGGAAGG
AGGAGGAAGAGAGGAAGGCGAAAGGGAAGCTGCCGCAATCACAGCAACAG
CAGCAATGGCAGCAGCGGCAGCAGCAGTCACAGCAGCAGCAGCAGTCACA
GCAGGAGCCGCCATGGCAGCAGCAGCGGAGGGGTAGCAGAACTAACACGG
GAAGGACTTTCGGGCGAGTGCTGGCCCCCACATTGGAAGAGGGGGAGGAC
GAATTGGAGGACGAGGAAAGGAAGGAAGAAGGGAGGGAGGGAGGGAGGGA
GGGAAGGGGGGAGAGAGGGAGAACATTGTCGTATGAGGACTTCGTAACGA
TGTCCTCTTCGTTGATGGGAAGGAAGAAAGGAAAGGGAGGGAAGGAGGGA
AGGGGAGAGGAGGAGATGGGGGAGGAAAAAGCGCTAGGCGAGAAGAGGGA
AGGAGGGAGGGAGGGAGGGAGAGAGGATCGACCACCGATGGATGTCTTGA
CGGCTTGCCTTCTCGGAGGCCCGGAATGGCGACAATCCCTGTCCTCTCTC
TTGCTCCTGGAGGAGCATGAAGACCACAGCAGCACCGCCGATCCACCTCT
CGCCCTCCCTCTCGCCCTCCCACCCGGCGAGGAACCGCAGGCCTTGCCAG
CCCCCGAGAAGAAAGAAGAAGAAGAGGCAGCAGAAGCAAAAAGAGAAGGA
GGAGAAGAGGAAAATGAAGAGATCGACCGTCGCATCGCTGCAATGCATCC
ACTGCTCCCTCCCTCCGAGTGGTGCAGTCAGAGCGACACCTCCCTCCCTC
CGTCCGTTCCCCCGGGGGAAGGGCTGCTGGCGTTGTTGGAGGAGCAGGTA
AAAGGTTGTAGGGAGGAGGGTGAATGGTATCGAATGTACCTTGATCCTGC
GTCGATTAGTGCCGCTAGGAGTAGCCTGTGTGGGGAGGAGTCGGAGAGGT
TGTACAGGGAGACGGTGAGGGGGGGGAGGAGGAGGGGGGAGGAAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGGGTTAGAGGTGGAGGAAGAAGAGGAAG
AAGGGAGGCGTGTGCCGGTGTGGGTGCTGCATCCGTCCTCGTCCTCTTCC
TTGGCTTCGTCGTGGAGGACGGGAGGAAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGGGAGTGCGAAAGACGGCGATGGAGCAGTGCTGGCTTCCTAG
CACCTCCTGGTCGGCCTCGAGTCTGACCAGCCTTGGATCAGCGACAGAGG
AAGACGTCGCCCTCGCCCTGGGCCCGGACTTGTTCTCATCGGGAATGGGA
ATGAAAGGAGGGGGGAGTGGGTGGGGTGGAAAAAGGAAGGGGGGGCGGAG
AGAGGAGGAGGAGGAGAGTAGTGATGAGGAGGTGGAGGTGGAGTTGGAAG
GAGGGAGGGAGAGAGGGATTGAGGAGGGGTTGATCCAGGTAAAGCAGGAT
GAGTACGTGAGCAGTGATAATCCCTTTATGCTCTTCAATAAGGCCGGGGC
CATTGGACCGCATTGCCTCCCATCGATGCGAGGAGGGGAGGGAGGGATGG
AGGAAGAAGAAGGAGGAGGAGGAGAGGTGCTGGTTGGTGGTGTGAGTGCG
CTCTTGTTTCGAGGGCGAAAGGGGAAATGA back to top
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