NO01G05080.1, NO01G05080.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G05080.1
Unique Name	NO01G05080.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3084
Alignment location	chr1:1351947..1356130 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:1351947..1356130 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G05080.1 vs.
Match: EWM29459.1 (mynd domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1284.6 bits (3323), Expect = 0.000e+0
Identity = 704/1086 (64.83%), Postives = 794/1086 (73.11%), Query Frame = 0

Query:    1 MPHRRLAAAIARMKARGPPALDPMEEDEQEPTPAGMLQDLSLCDPPSDATREDDVVEEENYVKAMLNRSMDIFRRIKASGTTTYREGWTLLEKELVLEMEYTNWAVLSDGTITALCAYLLDLLLCIEKDYVEE---------EAGPAGGGAAAAAAKVPGLG------KLREGAPPESLDCAFAALDVLEKMMEARFINFEGEDLERPFDRDGSLYIYRALVSALRLIVAVINYEGYDPAPQKLHKEEKEKEVEEEKSIKKSNGSSSNGNSNSRRPPTVPTANGSNGSNGLGKTFTRPASLSSSALVMHGTHPSLSSPRNALAPKTFTYDDAAGKEHVHTKAKTYEPLQYLLTVFYLLSHTSIQTDATAFWDSPDVVIEELWAPRNLQALLACIGIVLDKLHHSPDARDQALLTILVDRWVHTLHGLICTDSIGRQMSATVPEEDKARDFDNDKPGIECLTGVSTYLGRWMDVRCLPCSCMFCGVQRESMECMMSKWDRRLAHRLIQLGGVAVIGRVTFWLLESFRSIEVSGDCTGEDLYRTDVALATQVVHLSVLSDYQVATLAEAQTLRAQAVKQAIDSGFLNFLLAYFIPRKLCRLEDRQCETAEDQNKARRLARISCKNCIEFLLLSGDGWITDTCYNARGVVKIGRDINGRMAPAAQRLVELWAEDKRVCGTTEELLEHYAPFFLKLSEIIRLSARYGCMKDFWSQDLLDASVN----------------------------------------KALLCAMATFTDMCSPFFGGRDHYSSASRAVHDCEVLKRVLDTAKSSKAATSCIRALSYVSRVELVVSVSTMKNCTNRALHTHDGTTLHHHHLTGQLQQCQFQMLQQQQQRQQSQQQMLTRGCHQCHQLPTLHRPLRQCGRCKRVFYCSVGCQRANWKEHEKGCVPF---GSQGGGE-----GGRGVKRGE-------DVIERGGGEGGGGAGATAHEGGSGGSSATDTAGMMAGRGGGEGGGGEGGGGRATGGGTGEQAGTGTKALAGVGAGTTATRCSQCAVKAQGDRQLMTCGRCREACYCSKECQTKHWVLHRQQCGPDPLTV 1017
            MPHRRLA AIARMKA+GPPALD +EE  ++     +LQDL+L +PPSD  RE++VVEEE YVKAML RS++IF+R+K  G+  YREGWTLLEKELVLEMEYTNWAVLSD TI+AL AYLLDLL+ +EK +V +         E G   G AAA+     G G      K R+GAPPE+LDCAFA LDV+EKMMEARF+   G++LERPFD  GSL++Y++LV+ALRL+VAV+ +EGY+PAP    ++EK K  E E+ +K   G        +RRPP VP      GS+GL    +R  SLSSS+L +HGTHPSLSSPRNALAPKTFT+DDAAG+  VHTK+K  EPLQYL+TV YLLSHTS+QTD TAFW++PD ++EE W+ RN QALLACIGIVLDKLHHSPD  DQALLTILVDRWVHTLHGL+CTDSIGRQMSATVPEED ARD++NDKPGIECLTGVSTYLGRWMDVRCLPCSC+FCGVQR SMECM+SKWDRRLAHRLI+L GVAV+GR+ FWLLESFRSIEVSGD TGE+LYRTDVAL TQVVHL+VLSDYQVATLAE  TLRA+AVKQAIDSGFLNFLLAYFIPRKLCRLEDR+CET EDQNKARRLARISCKNCIEFLLLSGDGWITDTCYNARG VKI + IN RMAPAAQRLVELW ED+RVC T EELLEHYAPFFLKLSEIIRLSARYGCMK+ WSQDLLDA VN                                        KALLCAMATFTDMCSPFFGG DHYSSASRAVH C+VLKR+L+ AKS+ A TSCIRALSY+SRVELVV VS+ K C  R      G    H  L                    +        CHQCH+ PTL RPLRQC RCKRVFYC V CQRANW+EHEK CVP    GS+GG       GG G+  G        D +   GG  G G G    E G+GGSSAT                G G G R  GGG   + G G++A    GAG  A  C+ CA KA  DRQLMTCGRCREA YCSK+CQT+HWV+HR+QCGPDPL V
Sbjct:    1 MPHRRLAQAIARMKAKGPPALDALEEPTED-----LLQDLTLAEPPSDKAREENVVEEEQYVKAMLARSLNIFKRLKDEGSG-YREGWTLLEKELVLEMEYTNWAVLSDRTISALAAYLLDLLVFVEKTFVADGEGGTEALTEGGAERGAAAASQGDGTGQGRPTVPDKCRDGAPPEALDCAFATLDVVEKMMEARFLKCMGDELERPFDPVGSLHLYQSLVTALRLLVAVMQFEGYEPAPPV--EKEKVKAKEGEEKVKAKEGEEKR--KGNRRPPPVP------GSHGLA--LSRSESLSSSSLGLHGTHPSLSSPRNALAPKTFTFDDAAGESQVHTKSKANEPLQYLVTVLYLLSHTSVQTDVTAFWEAPDTIVEEQWSSRNFQALLACIGIVLDKLHHSPDTEDQALLTILVDRWVHTLHGLVCTDSIGRQMSATVPEEDLARDYENDKPGIECLTGVSTYLGRWMDVRCLPCSCVFCGVQRASMECMLSKWDRRLAHRLIELQGVAVLGRLAFWLLESFRSIEVSGDSTGENLYRTDVALVTQVVHLAVLSDYQVATLAEVPTLRARAVKQAIDSGFLNFLLAYFIPRKLCRLEDRRCETTEDQNKARRLARISCKNCIEFLLLSGDGWITDTCYNARGKVKIEKWINKRMAPAAQRLVELWVEDRRVCRTVEELLEHYAPFFLKLSEIIRLSARYGCMKEHWSQDLLDACVNVLSTYTYLSVSHYSSPQPSPTPSSPTPPPSPSPCPSLPPKKALLCAMATFTDMCSPFFGGCDHYSSASRAVHGCQVLKRLLEVAKSAHAVTSCIRALSYISRVELVVRVSSTKPCAQRQAGDQSGGVPLHPPL-------------------HATAPAPVMVCHQCHRPPTLDRPLRQCSRCKRVFYCCVECQRANWREHEKACVPPAEPGSEGGASKSGTTGGGGIGMGHMVNGVRSDGLVSNGGGAGAGTGGLHPENGNGGSSATT---------------GSGVGSRGGGGGVATRVGGGSRA----GAGAVAACCAHCAAKADSDRQLMTCGRCREAFYCSKDCQTRHWVVHRRQCGPDPLLV 1030

The following BLAST results are available for this feature:

BLAST of NO01G05080.1 vs.

BLAST of NO01G05080.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29459.1	0.000e+0	64.83	mynd domain protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G05080	NO01G05080	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G05080.1	NO01G05080.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G05080.1.cds1	NO01G05080.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05080.1.cds2	NO01G05080.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05080.1.cds3	NO01G05080.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05080.1.cds4	NO01G05080.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05080.1.cds5	NO01G05080.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:1351947..1356130+
coding sequence from alignment at chr1:1351947..1356130+

mRNA sequence

>NO01G05080.1 ID=NO01G05080.1|Name=NO01G05080.1|organism=Nannochloropsis oceanica|type=mRNA|length=3084bp
ATGCCTCATCGCAGGCTGGCCGCGGCCATCGCGCGAATGAAAGCTCGAGG
ACCCCCGGCCTTGGACCCGATGGAGGAGGATGAGCAGGAGCCAACGCCGG
CGGGAATGCTGCAGGATCTGTCGTTGTGTGACCCTCCAAGTGACGCCACC
CGGGAGGACGATGTGGTTGAGGAGGAGAACTATGTCAAGGCCATGCTAAA
CCGATCTATGGACATTTTTAGACGGATCAAGGCCAGTGGCACCACCACCT
ACAGGGAGGGCTGGACGCTCCTCGAGAAGGAACTAGTGCTTGAGATGGAG
TACACCAACTGGGCCGTTTTGTCCGATGGAACAATCACGGCGCTGTGTGC
GTATTTATTGGATCTGCTTTTATGTATCGAAAAGGACTATGTAGAAGAGG
AGGCCGGACCAGCGGGGGGAGGAGCAGCGGCAGCAGCAGCGAAGGTCCCG
GGGCTGGGGAAGCTCAGGGAGGGAGCGCCGCCTGAGTCGTTGGATTGTGC
GTTTGCGGCGTTGGATGTGCTGGAGAAGATGATGGAGGCGCGATTCATTA
ATTTCGAAGGGGAGGATCTAGAGAGGCCTTTTGACAGGGATGGTTCGTTG
TACATCTACCGGGCACTGGTGTCCGCATTAAGGTTAATAGTGGCGGTGAT
AAATTACGAAGGATATGACCCGGCACCTCAGAAGCTACACAAGGAAGAGA
AGGAGAAAGAAGTGGAGGAGGAAAAAAGTATTAAAAAGAGCAATGGCAGC
AGCAGCAACGGCAACAGCAACAGCAGGCGGCCACCAACTGTGCCGACCGC
CAACGGGAGTAACGGTAGTAACGGTCTTGGCAAGACGTTCACGCGCCCTG
CCTCCCTTTCCTCCTCCGCCCTGGTCATGCACGGGACACACCCCTCCCTG
TCCTCCCCCCGCAATGCTCTTGCCCCCAAAACCTTTACTTACGACGACGC
CGCGGGCAAGGAGCACGTCCACACCAAAGCCAAGACGTACGAGCCTCTGC
AGTACCTCCTTACGGTCTTCTATCTACTCTCTCACACCTCCATCCAAACG
GACGCGACCGCCTTTTGGGACTCGCCGGATGTGGTGATTGAGGAACTGTG
GGCCCCCCGCAACCTGCAGGCGCTGCTGGCGTGCATCGGCATTGTGCTCG
ACAAACTCCACCACTCCCCCGATGCCCGTGACCAGGCCCTCCTGACCATC
CTGGTCGACCGCTGGGTCCACACGTTACACGGCCTTATCTGCACGGATAG
CATTGGGCGGCAGATGTCCGCAACGGTACCAGAGGAGGACAAGGCACGGG
ATTTCGATAATGACAAACCGGGGATAGAATGCTTGACGGGCGTGAGCACG
TACTTGGGCAGGTGGATGGACGTAAGGTGCCTGCCGTGTTCGTGCATGTT
CTGCGGCGTGCAACGGGAGAGCATGGAGTGCATGATGAGCAAGTGGGACC
GGCGGCTGGCTCATCGATTGATTCAACTGGGGGGCGTGGCGGTGATTGGA
CGGGTTACATTTTGGCTGCTTGAGAGCTTCCGGTCGATTGAGGTGTCAGG
GGACTGCACGGGCGAGGATTTGTACCGAACAGACGTGGCCTTGGCTACGC
AGGTGGTGCACTTAAGCGTGCTGTCCGACTACCAGGTGGCCACTTTGGCG
GAGGCACAGACGTTGAGAGCACAAGCAGTGAAGCAGGCGATCGATTCGGG
ATTTTTGAATTTTTTGCTGGCATATTTTATCCCTAGGAAGCTGTGTCGGT
TGGAGGACCGACAATGTGAAACGGCAGAAGATCAGAACAAGGCTCGGAGG
CTCGCGAGGATTAGCTGCAAGAACTGTATCGAGTTCCTGTTGCTATCGGG
GGATGGGTGGATAACGGACACCTGCTACAACGCCCGCGGGGTGGTTAAAA
TCGGGCGCGACATTAACGGTCGCATGGCGCCGGCGGCACAACGACTGGTA
GAACTGTGGGCGGAGGACAAGAGAGTGTGTGGAACGACGGAGGAGCTGCT
CGAGCACTATGCGCCATTCTTCCTCAAGCTCTCGGAGATTATTCGGCTGT
CGGCCCGGTACGGCTGCATGAAGGACTTTTGGTCACAAGACCTCCTCGAT
GCCTCCGTCAACAAGGCACTCCTGTGCGCCATGGCCACGTTCACTGACAT
GTGCTCTCCTTTCTTCGGCGGACGCGACCACTACTCCTCTGCCTCTCGGG
CAGTCCACGACTGCGAGGTCCTTAAACGTGTTCTCGACACTGCCAAGTCG
TCTAAAGCCGCCACCAGCTGTATCCGGGCATTGTCCTACGTCTCGCGGGT
GGAGCTCGTTGTCAGCGTGTCGACCATGAAAAATTGCACCAACCGCGCCC
TCCACACCCACGACGGCACCACCCTCCACCACCACCACCTCACCGGGCAG
CTCCAGCAGTGCCAGTTCCAAATGCTGCAGCAGCAGCAGCAGCGGCAGCA
GTCACAGCAGCAGATGCTGACTAGGGGGTGTCACCAGTGCCACCAACTCC
CCACCTTGCACCGGCCCCTCCGGCAATGCGGGCGGTGCAAGCGGGTATTT
TATTGTAGTGTGGGGTGCCAACGGGCTAATTGGAAGGAACACGAGAAGGG
CTGTGTACCCTTTGGGAGCCAGGGAGGGGGAGAGGGAGGGAGGGGGGTCA
AGAGGGGGGAAGATGTGATAGAGAGGGGAGGAGGAGAGGGAGGAGGTGGT
GCAGGAGCAACTGCACATGAAGGAGGGAGTGGAGGGAGCAGTGCGACTGA
TACAGCGGGGATGATGGCTGGCAGAGGAGGAGGAGAGGGAGGAGGAGGAG
AGGGAGGGGGAGGAAGAGCGACGGGAGGAGGAACAGGAGAGCAGGCGGGG
ACAGGAACAAAAGCACTCGCAGGAGTAGGAGCAGGGACGACTGCGACGCG
TTGCTCGCAGTGTGCGGTCAAGGCGCAGGGAGACCGGCAATTGATGACGT
GTGGTCGTTGTCGGGAGGCGTGTTACTGCTCGAAGGAATGTCAGACGAAG
CATTGGGTGCTTCACAGACAGCAGTGCGGTCCGGATCCTTTGACAGTGGC
GGTGGAGAGCGGGGGAGAGGAGAGAGGGCGTTAG

protein sequence of NO01G05080.1

>NO01G05080.1-protein ID=NO01G05080.1-protein|Name=NO01G05080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1028bp
MPHRRLAAAIARMKARGPPALDPMEEDEQEPTPAGMLQDLSLCDPPSDAT
REDDVVEEENYVKAMLNRSMDIFRRIKASGTTTYREGWTLLEKELVLEME
YTNWAVLSDGTITALCAYLLDLLLCIEKDYVEEEAGPAGGGAAAAAAKVP
GLGKLREGAPPESLDCAFAALDVLEKMMEARFINFEGEDLERPFDRDGSL
YIYRALVSALRLIVAVINYEGYDPAPQKLHKEEKEKEVEEEKSIKKSNGS
SSNGNSNSRRPPTVPTANGSNGSNGLGKTFTRPASLSSSALVMHGTHPSL
SSPRNALAPKTFTYDDAAGKEHVHTKAKTYEPLQYLLTVFYLLSHTSIQT
DATAFWDSPDVVIEELWAPRNLQALLACIGIVLDKLHHSPDARDQALLTI
LVDRWVHTLHGLICTDSIGRQMSATVPEEDKARDFDNDKPGIECLTGVST
YLGRWMDVRCLPCSCMFCGVQRESMECMMSKWDRRLAHRLIQLGGVAVIG
RVTFWLLESFRSIEVSGDCTGEDLYRTDVALATQVVHLSVLSDYQVATLA
EAQTLRAQAVKQAIDSGFLNFLLAYFIPRKLCRLEDRQCETAEDQNKARR
LARISCKNCIEFLLLSGDGWITDTCYNARGVVKIGRDINGRMAPAAQRLV
ELWAEDKRVCGTTEELLEHYAPFFLKLSEIIRLSARYGCMKDFWSQDLLD
ASVNKALLCAMATFTDMCSPFFGGRDHYSSASRAVHDCEVLKRVLDTAKS
SKAATSCIRALSYVSRVELVVSVSTMKNCTNRALHTHDGTTLHHHHLTGQ
LQQCQFQMLQQQQQRQQSQQQMLTRGCHQCHQLPTLHRPLRQCGRCKRVF
YCSVGCQRANWKEHEKGCVPFGSQGGGEGGRGVKRGEDVIERGGGEGGGG
AGATAHEGGSGGSSATDTAGMMAGRGGGEGGGGEGGGGRATGGGTGEQAG
TGTKALAGVGAGTTATRCSQCAVKAQGDRQLMTCGRCREACYCSKECQTK
HWVLHRQQCGPDPLTVAVESGGEERGR*

mRNA from alignment at chr1:1351947..1356130+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G05080.1 ID=NO01G05080.1|Name=NO01G05080.1|organism=Nannochloropsis oceanica|type=mRNA|length=4184bp|location=Sequence derived from alignment at chr1:1351947..1356130+ (Nannochloropsis oceanica)
ATGCCTCATCGCAGGCTGGCCGCGGGTGAGTAGCCTGTCTCATGCGGTGT
CACGCACAGGGGGGCGGAGGCGCAGGGTAGCATGCCTCACTCACGGATGT
CCCGCGTATGATTAGTTATTTGGGGGGAAGTATGACCATGTACGAGAGAG
CCAGGGCGTGGGGCGGCTAATTTGCGCCCCAGTCTCTGTTGTCTTGCCCG
CCCGCGCCCGTCGCGTCGTTGCATACCCCAAGCCACACCGGTTGTGTGTT
GAGCAGGCCAACCGCAGCCACCATTCCGCTTAAGAATAGAGGGTGACCCT
GATGCTAAGAAAATGTCTGTATAACGGGAGCAAAGGCGATGCCAGCGACT
TGGTCGCAGGGGGCTGGTGTGGTGGAGGGTGTGCGACGACTCGGCCTGGG
CATGAATTGCCCCGTGCATAGGCCGGCTGGCCAGCCTCTTTTCTTGTTCT
GAAATCGTTTCGACTCGTTTATCGTGTCCATAGTACTGAAATGCGTATTC
GTCTGTCTCCCTTCCCCCCTTTCCTTCCCGTCTACACAGCCATCGCGCGA
ATGAAAGCTCGAGGACCCCCGGCCTTGGACCCGATGGAGGAGGATGAGCA
GGAGCCAACGCCGGCGGGAATGCTGCAGGATCTGTCGTTGTGTGACCCTC
CAAGTGACGCCACCCGGGAGGACGATGTGGTTGAGGAGGAGAACTATGTC
AAGGTACGTGTGAAGAAGGAGGGACGAATGGATGGATGAAGGGAGGGAGA
GTGGTCACAATTATACTGTGATTGTTTACAGGGGAGGAAGAAATGGATCT
GCAGGCAAGCGACCTAGTGACCTTTGTCATTTTTTGCAAGCATGTGACAT
AATTTAAGCAACCCACACTCCCACACTCGCTCCTACCATCCCTGTCCTCC
TTTCCATCCATCTGGGTTGATGTTTGCTCGCTTCTCACAACTGACCGCCT
TTTCCCTCCCTCCATCCCTCCATCCCTTCAAGGCCATGCTAAACCGATCT
ATGGACATTTTTAGACGGATCAAGGCCAGTGGCACCACCACCTACAGGGA
GGGCTGGACGCTCCTCGAGAAGGAACTAGTGCTTGAGATGGAGTACACCA
ACTGGGCCGTTTTGTCCGATGGAACAATCACGGCGCTGTGTGCGTATTTA
TTGGATCTGCTTTTATGTATCGAAAAGGACTATGTAGAAGAGGAGGCCGG
ACCAGCGGGGGGAGGAGCAGCGGCAGCAGCAGCGAAGGTCCCGGGGCTGG
GGAAGCTCAGGGAGGGAGCGCCGCCTGAGTCGTTGGATTGTGCGTTTGCG
GCGTTGGATGTGCTGGAGAAGATGATGGAGGCGCGATTCATTAATTTCGA
AGGGGAGGATCTAGAGAGGCCTTTTGACAGGGATGGTTCGTTGTACATCT
ACCGGGCACTGGTGTCCGCATTAAGGTTAATAGTGGCGGTGATAAATTAC
GAAGGATATGACCCGGCACCTCAGAAGCTACACAAGGAAGAGAAGGAGAA
AGAAGTGGAGGAGGAAAAAAGTATTAAAAAGAGCAATGGCAGCAGCAGCA
ACGGCAACAGCAACAGCAGGCGGCCACCAACTGTGCCGACCGCCAACGGG
AGTAACGGTAGTAACGGTCTTGGCAAGACGTTCACGCGCCCTGCCTCCCT
TTCCTCCTCCGCCCTGGTCATGCACGGGACACACCCCTCCCTGTCCTCCC
CCCGCAATGCTCTTGCCCCCAAAACCTTTACTTACGACGACGCCGCGGGC
AAGGAGCACGTCCACACCAAAGCCAAGACGTACGAGCCTCTGCAGTACCT
CCTTACGGTCTTCTATCTACTCTCTCACACCTCCATCCAAACGGACGCGA
CCGCCTTTTGGGACTCGCCGGATGTGGTGATTGAGGAACTGTGGGCCCCC
CGCAACCTGCAGGCGCTGCTGGCGTGCATCGGCATTGTGCTCGGTAAGTC
TCCTTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCACGTTTGTGTTTGGAA
GTGTTCCTGGACCTGTGGACCTGTGGGACTCACGCGTTTTTTCCGTGTCC
GGACCGACGCAAAATCCATTCTCACCTCCCTCCCTCCATCCCACCCGCCC
TCCCTTCGCCCAGACAAACTCCACCACTCCCCCGATGCCCGTGACCAGGC
CCTCCTGACCATCCTGGTCGACCGCTGGGTCCACACGTTACACGGCCTTA
TCTGCACGGATAGCATTGGGCGGCAGATGTCCGCAACGGTACCAGAGGAG
GACAAGGCACGGGATTTCGATAATGACAAACCGGGGATAGAATGCTTGAC
GGGCGTGAGCACGTACTTGGGCAGGTGGATGGACGTAAGGTGCCTGCCGT
GTTCGTGCATGTTCTGCGGCGTGCAACGGGAGAGCATGGAGTGCATGATG
AGCAAGTGGGACCGGCGGCTGGCTCATCGATTGATTCAACTGGGGGGCGT
GGCGGTGATTGGACGGGTTACATTTTGGCTGCTTGAGAGCTTCCGGTCGA
TTGAGGTGTCAGGGGACTGCACGGGCGAGGATTTGTACCGAACAGACGTG
GCCTTGGCTACGCAGGTGGTGCACTTAAGCGTGCTGTCCGACTACCAGGT
GGCCACTTTGGCGGAGGCACAGACGTTGAGAGCACAAGCAGTGAAGCAGG
CGATCGATTCGGGATTTTTGAATTTTTTGCTGGCATATTTTATCCCTAGG
AAGCTGTGTCGGTTGGAGGACCGACAATGTGAAACGGCAGAAGATCAGAA
CAAGGCTCGGAGGCTCGCGAGGATTAGCTGCAAGAACTGTATCGAGTTCC
TGTTGCTATCGGGGGATGGGTGGATAACGGACACCTGCTACAACGCCCGC
GGGGTGGTTAAAATCGGGCGCGACATTAACGGTCGCATGGCGCCGGCGGC
ACAACGACTGGTAGAACTGTGGGCGGAGGACAAGAGAGTGTGTGGAACGA
CGGAGGAGCTGCTCGAGCACTATGCGCCATTCTTCCTCAAGCTCTCGGAG
ATTATTCGGCTGTCGGCCCGGTACGGCTGCATGAAGGACTTTTGGTCACA
AGACCTCCTCGATGCCTCCGTCAACGTCTTGGCGACTTACACCCACCTTT
CCATCTCCCACTACGCCTCCTCCCCGTCCTCCCCTTCCTCGTGCGACACC
TCCTCCTTTCTCTCCCCCCCTCCTCCCCCTCCTCCACCGTCACCCTCTCC
CTCCCCCCGAAGAAGGCACTCCTGTGCGCCATGGCCACGTTCACTGACAT
GTGCTCTCCTTTCTTCGGCGGACGCGACCACTACTCCTCTGCCTCTCGGG
CAGTCCACGACTGCGAGGTCCTTAAACGTGTTCTCGACACTGCCAAGTCG
TCTAAAGCCGCCACCAGCTGTATCCGGGCATTGTCCTACGTCTCGCGGGT
GGAGCTCGTTGTCAGCGTGTCGACCATGAAAAATTGCACCAACCGCGCCC
TCCACACCCACGACGGCACCACCCTCCACCACCACCACCTCACCGGGCAG
CTCCAGCAGTGCCAGTTCCAAATGCTGCAGCAGCAGCAGCAGCGGCAGCA
GTCACAGCAGCAGATGCTGACTAGGGGGTGTCACCAGTGCCACCAACTCC
CCACCTTGCACCGGCCCCTCCGGCAATGCGGGCGGTGCAAGCGGGTATTT
TATTGTAGTGTGGGGTGCCAACGGGCTAATTGGAAGGAACACGAGAAGGG
CTGTGTACCCTTTGGGAGCCAGGGAGGGGGAGAGGGAGGGAGGGGGGTCA
AGAGGGGGGAAGATGTGATAGAGAGGGGAGGAGGAGAGGGAGGAGGTGGT
GCAGGAGCAACTGCACATGAAGGAGGGAGTGGAGGGAGCAGTGCGACTGA
TACAGCGGGGATGATGGCTGGCAGAGGAGGAGGAGAGGGAGGAGGAGGAG
AGGGAGGGGGAGGAAGAGCGACGGGAGGAGGAACAGGAGAGCAGGCGGGG
ACAGGAACAAAAGCACTCGCAGGAGTAGGAGCAGGGACGACTGCGACGCG
TTGCTCGCAGTGTGCGGTCAAGGCGCAGGGAGACCGGCAATTGATGACGT
GTGGTCGTTGTCGGGAGGCGTGTTACTGCTCGAAGGAATGTCAGACGAAG
CATTGGGTGCTTCACAGACAGCAGTGCGGTCCGGATCCTTTGACAGTGGC
GGTGGAGAGCGGGGGAGAGGAGAGAGGGCGTTAG

Coding sequence (CDS) from alignment at chr1:1351947..1356130+

>NO01G05080.1 ID=NO01G05080.1|Name=NO01G05080.1|organism=Nannochloropsis oceanica|type=CDS|length=3084bp|location=Sequence derived from alignment at chr1:1351947..1356130+ (Nannochloropsis oceanica)
ATGCCTCATCGCAGGCTGGCCGCGGCCATCGCGCGAATGAAAGCTCGAGG
ACCCCCGGCCTTGGACCCGATGGAGGAGGATGAGCAGGAGCCAACGCCGG
CGGGAATGCTGCAGGATCTGTCGTTGTGTGACCCTCCAAGTGACGCCACC
CGGGAGGACGATGTGGTTGAGGAGGAGAACTATGTCAAGGCCATGCTAAA
CCGATCTATGGACATTTTTAGACGGATCAAGGCCAGTGGCACCACCACCT
ACAGGGAGGGCTGGACGCTCCTCGAGAAGGAACTAGTGCTTGAGATGGAG
TACACCAACTGGGCCGTTTTGTCCGATGGAACAATCACGGCGCTGTGTGC
GTATTTATTGGATCTGCTTTTATGTATCGAAAAGGACTATGTAGAAGAGG
AGGCCGGACCAGCGGGGGGAGGAGCAGCGGCAGCAGCAGCGAAGGTCCCG
GGGCTGGGGAAGCTCAGGGAGGGAGCGCCGCCTGAGTCGTTGGATTGTGC
GTTTGCGGCGTTGGATGTGCTGGAGAAGATGATGGAGGCGCGATTCATTA
ATTTCGAAGGGGAGGATCTAGAGAGGCCTTTTGACAGGGATGGTTCGTTG
TACATCTACCGGGCACTGGTGTCCGCATTAAGGTTAATAGTGGCGGTGAT
AAATTACGAAGGATATGACCCGGCACCTCAGAAGCTACACAAGGAAGAGA
AGGAGAAAGAAGTGGAGGAGGAAAAAAGTATTAAAAAGAGCAATGGCAGC
AGCAGCAACGGCAACAGCAACAGCAGGCGGCCACCAACTGTGCCGACCGC
CAACGGGAGTAACGGTAGTAACGGTCTTGGCAAGACGTTCACGCGCCCTG
CCTCCCTTTCCTCCTCCGCCCTGGTCATGCACGGGACACACCCCTCCCTG
TCCTCCCCCCGCAATGCTCTTGCCCCCAAAACCTTTACTTACGACGACGC
CGCGGGCAAGGAGCACGTCCACACCAAAGCCAAGACGTACGAGCCTCTGC
AGTACCTCCTTACGGTCTTCTATCTACTCTCTCACACCTCCATCCAAACG
GACGCGACCGCCTTTTGGGACTCGCCGGATGTGGTGATTGAGGAACTGTG
GGCCCCCCGCAACCTGCAGGCGCTGCTGGCGTGCATCGGCATTGTGCTCG
ACAAACTCCACCACTCCCCCGATGCCCGTGACCAGGCCCTCCTGACCATC
CTGGTCGACCGCTGGGTCCACACGTTACACGGCCTTATCTGCACGGATAG
CATTGGGCGGCAGATGTCCGCAACGGTACCAGAGGAGGACAAGGCACGGG
ATTTCGATAATGACAAACCGGGGATAGAATGCTTGACGGGCGTGAGCACG
TACTTGGGCAGGTGGATGGACGTAAGGTGCCTGCCGTGTTCGTGCATGTT
CTGCGGCGTGCAACGGGAGAGCATGGAGTGCATGATGAGCAAGTGGGACC
GGCGGCTGGCTCATCGATTGATTCAACTGGGGGGCGTGGCGGTGATTGGA
CGGGTTACATTTTGGCTGCTTGAGAGCTTCCGGTCGATTGAGGTGTCAGG
GGACTGCACGGGCGAGGATTTGTACCGAACAGACGTGGCCTTGGCTACGC
AGGTGGTGCACTTAAGCGTGCTGTCCGACTACCAGGTGGCCACTTTGGCG
GAGGCACAGACGTTGAGAGCACAAGCAGTGAAGCAGGCGATCGATTCGGG
ATTTTTGAATTTTTTGCTGGCATATTTTATCCCTAGGAAGCTGTGTCGGT
TGGAGGACCGACAATGTGAAACGGCAGAAGATCAGAACAAGGCTCGGAGG
CTCGCGAGGATTAGCTGCAAGAACTGTATCGAGTTCCTGTTGCTATCGGG
GGATGGGTGGATAACGGACACCTGCTACAACGCCCGCGGGGTGGTTAAAA
TCGGGCGCGACATTAACGGTCGCATGGCGCCGGCGGCACAACGACTGGTA
GAACTGTGGGCGGAGGACAAGAGAGTGTGTGGAACGACGGAGGAGCTGCT
CGAGCACTATGCGCCATTCTTCCTCAAGCTCTCGGAGATTATTCGGCTGT
CGGCCCGGTACGGCTGCATGAAGGACTTTTGGTCACAAGACCTCCTCGAT
GCCTCCGTCAACAAGGCACTCCTGTGCGCCATGGCCACGTTCACTGACAT
GTGCTCTCCTTTCTTCGGCGGACGCGACCACTACTCCTCTGCCTCTCGGG
CAGTCCACGACTGCGAGGTCCTTAAACGTGTTCTCGACACTGCCAAGTCG
TCTAAAGCCGCCACCAGCTGTATCCGGGCATTGTCCTACGTCTCGCGGGT
GGAGCTCGTTGTCAGCGTGTCGACCATGAAAAATTGCACCAACCGCGCCC
TCCACACCCACGACGGCACCACCCTCCACCACCACCACCTCACCGGGCAG
CTCCAGCAGTGCCAGTTCCAAATGCTGCAGCAGCAGCAGCAGCGGCAGCA
GTCACAGCAGCAGATGCTGACTAGGGGGTGTCACCAGTGCCACCAACTCC
CCACCTTGCACCGGCCCCTCCGGCAATGCGGGCGGTGCAAGCGGGTATTT
TATTGTAGTGTGGGGTGCCAACGGGCTAATTGGAAGGAACACGAGAAGGG
CTGTGTACCCTTTGGGAGCCAGGGAGGGGGAGAGGGAGGGAGGGGGGTCA
AGAGGGGGGAAGATGTGATAGAGAGGGGAGGAGGAGAGGGAGGAGGTGGT
GCAGGAGCAACTGCACATGAAGGAGGGAGTGGAGGGAGCAGTGCGACTGA
TACAGCGGGGATGATGGCTGGCAGAGGAGGAGGAGAGGGAGGAGGAGGAG
AGGGAGGGGGAGGAAGAGCGACGGGAGGAGGAACAGGAGAGCAGGCGGGG
ACAGGAACAAAAGCACTCGCAGGAGTAGGAGCAGGGACGACTGCGACGCG
TTGCTCGCAGTGTGCGGTCAAGGCGCAGGGAGACCGGCAATTGATGACGT
GTGGTCGTTGTCGGGAGGCGTGTTACTGCTCGAAGGAATGTCAGACGAAG
CATTGGGTGCTTCACAGACAGCAGTGCGGTCCGGATCCTTTGACAGTGGC
GGTGGAGAGCGGGGGAGAGGAGAGAGGGCGTTAG

Synonyms

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