NO01G04910.1, NO01G04910.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G04910.1
Unique NameNO01G04910.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1359
Alignment locationchr1:1300173..1301531 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1300173..1301531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO01G04910.1 vs.
Match: EWM29422.1 (aryldialkylphosphatase [Nannochloropsis gaditana])

HSP 1 Score: 416.0 bits (1068), Expect = 1.500e-112
Identity = 221/453 (48.79%), Postives = 291/453 (64.24%), Query Frame = 0 
Query:    1 MIRAATSSLDPPAALLSLGTNDLVIDAPVASA---SATPLKQEELTLSNLGQVRCHPDQYIWNLRLPSADEMQRELEAALAVP-GLTAQNSTMLILHTATATSRDYTPLRSLARKLEPKNLLIVTGALPGPISLDAKPERVSKDLVHTLRFGIPLVPPAATRETDAVTEKEEAVENPALLSTSERIGAGFIGLVDLNGLNKIWPEKEREGREDLLLQSLAYASRESSGAPIFITTQDAFGRAPFDGKRIYAVFSTLIKYGADKTRIVFCRCPCRLDLEDAYNALLT--DGVHVSFSFHGNAFYPLSPPVQKCAESTLGFKTVDSPSDEEGACLLSRLCRKGFSSQLHLSHSIDCRIKLQKYGGFGYTHLFLNVSPRFERLEVSRCDVERMNGANLRDLLAWWTPPPKQEKEVEMGTCSWCHKEFEMQENMYFTKFSYVYCRSKCLSKHGDTGW 448
            MIR  T+SL+   ++L LG++ LV+D  + SA   S++   QEE+ LSNLG +R +P QY+WNLRLPSADEM RELEA L +P  L++  S  +++H++  TSRD  PL  LA +LE KN+++VTG LP      + PE ++ DLVH L+FG+ +  P  T  T        +   P  +   ERIG GF+GLVDL  L     E+E +  E +LL+++  ASR   G PIF+TT D +G+  F   R  ++   +   GA    IVFCRCPC + L  +Y A+L   D VH+SFSFHGNAFY  SP     +E           SDEEGA L+S LC +GF+S++ LSH+I CR+KLQKYGGFGYTHL  ++ PR  RL VS  D+ R+ G N+R LLAWW PPP  EK VE+GTCSWC   FE++EN YF+KF+YVYC S+CLS HGDTGW
Sbjct:    1 MIRTVTTSLETSLSVLCLGSDGLVLDESLTSAPSMSSSAFNQEEICLSNLGAIRSNPGQYLWNLRLPSADEMLRELEAVLELPESLSSSTSCKVVIHSSCPTSRDREPLSRLAARLEKKNIMVVTGVLPSDCQGSSTPETMATDLVHKLKFGVEVSSPGPTSGTLPGLPGPTSALVPLKM---ERIGMGFLGLVDLPALRGGISEEEGKRLEGVLLKAMGMASRLCQGVPIFLTTHDVWGQEAFSESRALSIIDGVHAGGAKHAPIVFCRCPCHVHLLRSYAAILKYDDQVHLSFSFHGNAFYA-SPTAALASEVA---------SDEEGARLVSLLCEEGFASRILLSHTITCRLKLQKYGGFGYTHLPQHILPRLLRLGVSPSDLARVGGGNMRRLLAWWRPPPPVEKPVEIGTCSWCKAAFEVRENAYFSKFAYVYCTSRCLSAHGDTGW 440
The following BLAST results are available for this feature:
BLAST of NO01G04910.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29422.11.500e-11248.79aryldialkylphosphatase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04910NO01G04910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G04910.1NO01G04910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G04910.1.cds1NO01G04910.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G04910.1 ID=NO01G04910.1|Name=NO01G04910.1|organism=Nannochloropsis oceanica|type=mRNA|length=1359bp
ATGATCAGGGCGGCGACAAGCTCGTTGGATCCCCCGGCCGCCCTCTTGTC
CCTGGGTACCAATGACCTCGTAATCGACGCACCCGTCGCCTCTGCCTCCG
CCACACCGTTGAAGCAAGAGGAGCTGACCCTCTCCAATTTAGGTCAAGTC
CGCTGCCATCCCGATCAGTATATATGGAATCTGCGCCTACCCTCGGCGGA
CGAGATGCAGCGTGAACTTGAGGCGGCACTAGCGGTGCCAGGCCTCACCG
CTCAAAACAGTACCATGCTAATTTTGCACACTGCCACTGCCACCTCGCGC
GACTACACCCCCTTGCGCAGCTTGGCTCGAAAGCTCGAGCCCAAGAATTT
ACTGATTGTCACTGGCGCACTTCCTGGTCCCATCTCACTCGATGCCAAAC
CTGAGCGCGTGAGCAAAGACTTAGTTCACACGCTCAGATTTGGTATCCCT
CTTGTTCCTCCCGCAGCCACGAGGGAGACGGACGCAGTAACAGAAAAGGA
GGAGGCAGTGGAAAACCCTGCTTTGCTCTCGACAAGTGAGCGGATCGGTG
CGGGGTTCATCGGACTGGTGGATCTCAATGGGCTGAACAAAATATGGCCT
GAGAAAGAGAGGGAGGGGAGAGAGGACCTTCTCCTTCAATCCCTTGCTTA
TGCCTCAAGGGAAAGCAGCGGTGCCCCCATCTTCATCACCACACAAGACG
CTTTCGGTCGAGCACCTTTCGATGGAAAGAGAATATATGCTGTATTTTCT
ACTCTTATAAAATACGGTGCGGACAAGACGCGGATTGTCTTCTGTCGGTG
CCCTTGCCGTCTAGATCTTGAAGACGCCTATAATGCCCTCCTTACTGATG
GTGTCCACGTATCCTTCTCTTTTCATGGCAACGCCTTCTACCCTCTCTCC
CCCCCTGTTCAAAAATGTGCTGAATCCACCTTGGGCTTCAAAACCGTTGA
CTCCCCCTCCGATGAGGAAGGGGCGTGTCTCCTCTCGAGGCTCTGCAGGA
AAGGATTTTCTTCCCAATTGCATCTCTCTCACTCCATCGACTGCCGCATA
AAGTTACAAAAATATGGCGGCTTCGGTTACACTCATCTTTTCTTAAATGT
TTCCCCTCGTTTTGAGCGCTTGGAAGTCAGTCGTTGTGATGTAGAGAGAA
TGAATGGAGCCAATCTGCGGGATCTACTGGCATGGTGGACCCCGCCGCCA
AAGCAAGAGAAGGAGGTAGAAATGGGGACATGCTCATGGTGTCACAAGGA
GTTTGAGATGCAGGAGAACATGTATTTTACCAAGTTTTCGTATGTGTACT
GTAGGAGTAAGTGTCTGAGCAAGCATGGAGATACCGGGTGGACTCCGATC
CAAACATAA
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protein sequence of NO01G04910.1

>NO01G04910.1-protein ID=NO01G04910.1-protein|Name=NO01G04910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=453bp
MIRAATSSLDPPAALLSLGTNDLVIDAPVASASATPLKQEELTLSNLGQV
RCHPDQYIWNLRLPSADEMQRELEAALAVPGLTAQNSTMLILHTATATSR
DYTPLRSLARKLEPKNLLIVTGALPGPISLDAKPERVSKDLVHTLRFGIP
LVPPAATRETDAVTEKEEAVENPALLSTSERIGAGFIGLVDLNGLNKIWP
EKEREGREDLLLQSLAYASRESSGAPIFITTQDAFGRAPFDGKRIYAVFS
TLIKYGADKTRIVFCRCPCRLDLEDAYNALLTDGVHVSFSFHGNAFYPLS
PPVQKCAESTLGFKTVDSPSDEEGACLLSRLCRKGFSSQLHLSHSIDCRI
KLQKYGGFGYTHLFLNVSPRFERLEVSRCDVERMNGANLRDLLAWWTPPP
KQEKEVEMGTCSWCHKEFEMQENMYFTKFSYVYCRSKCLSKHGDTGWTPI
QT*
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mRNA from alignment at chr1:1300173..1301531+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G04910.1 ID=NO01G04910.1|Name=NO01G04910.1|organism=Nannochloropsis oceanica|type=mRNA|length=1359bp|location=Sequence derived from alignment at chr1:1300173..1301531+ (Nannochloropsis oceanica)
ATGATCAGGGCGGCGACAAGCTCGTTGGATCCCCCGGCCGCCCTCTTGTC
CCTGGGTACCAATGACCTCGTAATCGACGCACCCGTCGCCTCTGCCTCCG
CCACACCGTTGAAGCAAGAGGAGCTGACCCTCTCCAATTTAGGTCAAGTC
CGCTGCCATCCCGATCAGTATATATGGAATCTGCGCCTACCCTCGGCGGA
CGAGATGCAGCGTGAACTTGAGGCGGCACTAGCGGTGCCAGGCCTCACCG
CTCAAAACAGTACCATGCTAATTTTGCACACTGCCACTGCCACCTCGCGC
GACTACACCCCCTTGCGCAGCTTGGCTCGAAAGCTCGAGCCCAAGAATTT
ACTGATTGTCACTGGCGCACTTCCTGGTCCCATCTCACTCGATGCCAAAC
CTGAGCGCGTGAGCAAAGACTTAGTTCACACGCTCAGATTTGGTATCCCT
CTTGTTCCTCCCGCAGCCACGAGGGAGACGGACGCAGTAACAGAAAAGGA
GGAGGCAGTGGAAAACCCTGCTTTGCTCTCGACAAGTGAGCGGATCGGTG
CGGGGTTCATCGGACTGGTGGATCTCAATGGGCTGAACAAAATATGGCCT
GAGAAAGAGAGGGAGGGGAGAGAGGACCTTCTCCTTCAATCCCTTGCTTA
TGCCTCAAGGGAAAGCAGCGGTGCCCCCATCTTCATCACCACACAAGACG
CTTTCGGTCGAGCACCTTTCGATGGAAAGAGAATATATGCTGTATTTTCT
ACTCTTATAAAATACGGTGCGGACAAGACGCGGATTGTCTTCTGTCGGTG
CCCTTGCCGTCTAGATCTTGAAGACGCCTATAATGCCCTCCTTACTGATG
GTGTCCACGTATCCTTCTCTTTTCATGGCAACGCCTTCTACCCTCTCTCC
CCCCCTGTTCAAAAATGTGCTGAATCCACCTTGGGCTTCAAAACCGTTGA
CTCCCCCTCCGATGAGGAAGGGGCGTGTCTCCTCTCGAGGCTCTGCAGGA
AAGGATTTTCTTCCCAATTGCATCTCTCTCACTCCATCGACTGCCGCATA
AAGTTACAAAAATATGGCGGCTTCGGTTACACTCATCTTTTCTTAAATGT
TTCCCCTCGTTTTGAGCGCTTGGAAGTCAGTCGTTGTGATGTAGAGAGAA
TGAATGGAGCCAATCTGCGGGATCTACTGGCATGGTGGACCCCGCCGCCA
AAGCAAGAGAAGGAGGTAGAAATGGGGACATGCTCATGGTGTCACAAGGA
GTTTGAGATGCAGGAGAACATGTATTTTACCAAGTTTTCGTATGTGTACT
GTAGGAGTAAGTGTCTGAGCAAGCATGGAGATACCGGGTGGACTCCGATC
CAAACATAA
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Coding sequence (CDS) from alignment at chr1:1300173..1301531+

>NO01G04910.1 ID=NO01G04910.1|Name=NO01G04910.1|organism=Nannochloropsis oceanica|type=CDS|length=1359bp|location=Sequence derived from alignment at chr1:1300173..1301531+ (Nannochloropsis oceanica)
ATGATCAGGGCGGCGACAAGCTCGTTGGATCCCCCGGCCGCCCTCTTGTC
CCTGGGTACCAATGACCTCGTAATCGACGCACCCGTCGCCTCTGCCTCCG
CCACACCGTTGAAGCAAGAGGAGCTGACCCTCTCCAATTTAGGTCAAGTC
CGCTGCCATCCCGATCAGTATATATGGAATCTGCGCCTACCCTCGGCGGA
CGAGATGCAGCGTGAACTTGAGGCGGCACTAGCGGTGCCAGGCCTCACCG
CTCAAAACAGTACCATGCTAATTTTGCACACTGCCACTGCCACCTCGCGC
GACTACACCCCCTTGCGCAGCTTGGCTCGAAAGCTCGAGCCCAAGAATTT
ACTGATTGTCACTGGCGCACTTCCTGGTCCCATCTCACTCGATGCCAAAC
CTGAGCGCGTGAGCAAAGACTTAGTTCACACGCTCAGATTTGGTATCCCT
CTTGTTCCTCCCGCAGCCACGAGGGAGACGGACGCAGTAACAGAAAAGGA
GGAGGCAGTGGAAAACCCTGCTTTGCTCTCGACAAGTGAGCGGATCGGTG
CGGGGTTCATCGGACTGGTGGATCTCAATGGGCTGAACAAAATATGGCCT
GAGAAAGAGAGGGAGGGGAGAGAGGACCTTCTCCTTCAATCCCTTGCTTA
TGCCTCAAGGGAAAGCAGCGGTGCCCCCATCTTCATCACCACACAAGACG
CTTTCGGTCGAGCACCTTTCGATGGAAAGAGAATATATGCTGTATTTTCT
ACTCTTATAAAATACGGTGCGGACAAGACGCGGATTGTCTTCTGTCGGTG
CCCTTGCCGTCTAGATCTTGAAGACGCCTATAATGCCCTCCTTACTGATG
GTGTCCACGTATCCTTCTCTTTTCATGGCAACGCCTTCTACCCTCTCTCC
CCCCCTGTTCAAAAATGTGCTGAATCCACCTTGGGCTTCAAAACCGTTGA
CTCCCCCTCCGATGAGGAAGGGGCGTGTCTCCTCTCGAGGCTCTGCAGGA
AAGGATTTTCTTCCCAATTGCATCTCTCTCACTCCATCGACTGCCGCATA
AAGTTACAAAAATATGGCGGCTTCGGTTACACTCATCTTTTCTTAAATGT
TTCCCCTCGTTTTGAGCGCTTGGAAGTCAGTCGTTGTGATGTAGAGAGAA
TGAATGGAGCCAATCTGCGGGATCTACTGGCATGGTGGACCCCGCCGCCA
AAGCAAGAGAAGGAGGTAGAAATGGGGACATGCTCATGGTGTCACAAGGA
GTTTGAGATGCAGGAGAACATGTATTTTACCAAGTTTTCGTATGTGTACT
GTAGGAGTAAGTGTCTGAGCAAGCATGGAGATACCGGGTGGACTCCGATC
CAAACATAA
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Synonyms
Publications