NO01G03740.1, NO01G03740.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G03740.1
Unique Name	NO01G03740.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4352
Alignment location	chr1:998435..1003305 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:998435..1003305 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G03740.1 vs.
Match: EWM29312.1 (ring finger protein [Nannochloropsis gaditana])

HSP 1 Score: 447.2 bits (1149), Expect = 8.800e-122
Identity = 283/537 (52.70%), Postives = 337/537 (62.76%), Query Frame = 0

Query:  122 ENRACEDLSDCRSCFRTPGCGFCGGTGQCMPEAHASTCGKGWSNAGVCYTTCPVESVPFHDAAGVIQLGAQAPRPVKYIPGDACTYTIWPLLDTGTTGGNGPTGGNRRTLMIRLQFEYMDLGPGDSLSIFSNGLDGPKILSIGGNGEGVVNRIITSRSSSVVLRLNANGHEGGTGFRVYWRVIENSPLDIYLISAIIVTSILTCILCSCCCNNCVAMMVGQHHDDGVGGGGMGRFGLSFGVGARAAGAAGATGRGMARALSAQEKARLPIAPYDPGPGAGGEEGKEGGKEGGLENGPSSIFQCDMRECCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEGVDGGSGGGMGP----RALIDLLRQRM------LVHVRRNPPRARTYPAAAAAAPAAPVLAAGGGVGGEREEEGREDGLGGGGWLRWWGSRRYAPSSTAGGGGG---------GEGEEREGEQEEEELEEETEEE---EHVMVFQLSP--ERRGGGGGEGEGGGGGGGGDGGGG 635
            ++  C+ +SDC SCF+  GCG+CGGTG+C+ +A A  C KGWS+ G+CYT+CP ++ P H+AAGVIQ GA AP  V YIPG++CT+TIWPL  +G+    G   GNRR++MIRLQFEY+DLGPGD+L+I+SNGLDGPKILSI G+G G+VNR ITSRSSSV+LRL+A G  GGTGFRVYWRVIE+SPLDIYLISAIIVTSILTCILCSCCCNNCVAM        G GGG  G   L    GA A+  A       ARALS QEKARLPIAPYDPG             E  L N          RECCICL+DFERTDLVRKLPCGH++HSECVD WFS NSVCPLCK++V DKL       GV G  G GM P    RA + L+++R+      L+H+ R PP       +A + P            G RE EG   G G G   RW  SR +      GG  G             EREGE+     ++  E+    E V+VF+ +P    RGG   E EGG G  GG G GG
Sbjct:   54 QDAVCDAISDCTSCFQEAGCGYCGGTGRCLAQASADKCSKGWSDTGICYTSCPADAAPLHEAAGVIQFGAMAPEAVHYIPGESCTFTIWPLPGSGSATSPGAGAGNRRSVMIRLQFEYLDLGPGDTLNIYSNGLDGPKILSIAGSGLGIVNRTITSRSSSVILRLHAEGPVGGTGFRVYWRVIESSPLDIYLISAIIVTSILTCILCSCCCNNCVAMF------SGAGGGRRGGRLLWAWGGANASAPA-------ARALSPQEKARLPIAPYDPG-------------ESNLYN---------FRECCICLTDFERTDLVRKLPCGHVYHSECVDCWFSVNSVCPLCKSDVRDKL-------GV-GAEGAGMVPFWRMRAALHLIQRRLLWPAGHLLHLHRPPPH-----GSALSFP------------GNREAEG---GRGSGNGRRWLNSRGW-----LGGDRGVLSIDWQPRAPTAEREGEERWPRWDQGGEQNVRGEEVVVFEFAPGGAERGGRAVE-EGGRGEEGGHGWGG 521

The following BLAST results are available for this feature:

BLAST of NO01G03740.1 vs.

BLAST of NO01G03740.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29312.1	8.800e-122	52.70	ring finger protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G03740	NO01G03740	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G03740.1	NO01G03740.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G03740.1.cds1	NO01G03740.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G03740.1.cds2	NO01G03740.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G03740.1.cds3	NO01G03740.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G03740.1.cds4	NO01G03740.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:998435..1003305+
coding sequence from alignment at chr1:998435..1003305+

mRNA sequence

>NO01G03740.1 ID=NO01G03740.1|Name=NO01G03740.1|organism=Nannochloropsis oceanica|type=mRNA|length=4352bp
TTCCCCCTGCTCTGTGTCTATTGTTACTTCATTATTTCACGCTTCGAACA
ACGCGTTGCGAACAAATCGGAGTCTTTTTTTGAATCCCCCCCCCACTCCT
CCCTCCTCTTTTAATTTATCAACCGCCGTCTTCTTCCCCGCCGTCGTCGC
TCTTCGTCTTCGTCCTCCTTCACTCGCAACAACCCCTCCTCTTCCTCCTC
CTCTTCCCACCCCCTTCTCACCCTCCCTCCCCTCTTCATACTCCCCTCCC
AAATACTCGCAAACATGTCCTCGTCTCCACGACTGTACCCATCACTCCCG
CCTTCGAAAATTTTATCCAATCCCTCTAGCTCGTCTTCCTCTTCCAAAAA
GTCCATCGACATCGCCTCCTCCTCCTCTTCCTCCTCCCCCTCCTCCCCCA
TGCCCAACTTCAACCCCAAACCCTCCTTCCGCCGCCTCTTCCTATTCTCC
TCCTCCTTTTTCAGCTTGTTTCCCAAAAAAGCCTTAAAGGGAACCTTATC
TATGTAGGGATACTCTCCCACCCACGCCCCCGCGGCCGGCACAAACAAAT
CCGACACCCCCAGCAATTCCTCAAACTCCGGCGTCTCACTCAACACCAAA
CCCTCGCATCGCATCCCCGGCCTCACCCTCTTATAACTAGGCAACACAGG
AGCATACACCCTCAATTTACGCCCTTCTTCGTCCTCCACACACATGACCA
TTGCCTCCGGTCTATTATATTCCTCTGCCTGGGTTATCCTGCCTACCCTC
ACCACCTTCCCACTAAACAGCGCCCCGAACACTCCCTCATCCCGCGGATG
CCGTGCAAAATAACCCCCCCTAAAACTTAGATTCCGGCGATATGCTGCCA
GGCCCGGCGCCAGGATCCAATAAAACAAAAATACCGTTCCCAAAATCGTG
GCTGCTGGTAGCCCTATCAGGAAGGTCAAGAACCAGCTGATCCACAACCC
GAAGAAGGTGGACGAGGCCGCTTCATAAATCTTTCCGAATTTATCGCTTT
CCGTGATACCCCAGTAGTACTTCCATTGGTCGCCCGTGAATTGTGAGGGG
AGGAGACGACGGAGGGTGCGGTCCCGGAGGACGGTCAACCCGCAAGTGAT
GGCGCCACATGTACGACCGTGGAAATGGCGATTGCGCAGGTGGAGGGTGG
CGCTGTGCCCGTTGCACGGGAGGGAGGGGGCAAGTCCAAAGGCGAGAGGA
GAGCTGGTGGCTCGGCGATGACGGGGAGAGAAAAAGTGAGCGGGAGAAGA
GGAAGAGTATGGAGATGGCGGGTTGTGAAACGGGAGTTGTTGCTGCGGGA
GGGGCTGGGGGGTGAAAAAGGATAGGGAAAGGGAAAGAGATGGTGAGTGT
GAGCTGTGGGCTAAAAAGGAAAGGGGTGGACATAAGAATGAGATACCAGA
TTCATCAAGATGGGGTCTGCCGAACTGATTCCTCAGGACGACCAGGGCAT
GATGGAGTGAGGCGGGAGGACAGGCAAGATCACAGCCACAAGCGACCACA
GCAAACAGGAAACCTGCAAAGGGTTGCTGCATCAAAGTGAGGCTAATTTG
GACTTACCATGAGGCTACTGCTGCAGCAAGGAGTCGCAAGCGGCATAATG
GATGATGATAATGCTGAGGGCGGCATCATTACTTTGACTAGAACAGGCCT
TGTAGACCCCGCCGGAGATGACTACCACTTGTGCCCTGCGACGGTTGTCC
GTGTTCTCTTTTAATTGTCTTAGTTGGCGTAAGTGTAGATTTATGCGTAG
GTTAGGGGTCAAAAGTATTGCTCTACTTGTTTTTTTAAAGTTCAAGAAAG
CTCAAGCTCATCGGGGTCAAGATGACGTACAAAGCACTCGCCCATCTTCT
ACTTTTACCCTCAAGATAACATATCCTACAAATCCTGCAGGCCAAGGCAT
AAGGGACACTAGATTGAACCTGTTTGCTGTGTGCTTTTGTTGAGACCCTC
TTAGGCCTGTGCCTCCCATCCAGCCACCGCGGCTGCTCCCTAACAGAACA
ACTGGAGCCTGAAAAATAGAACTGATAATGTACACATGCCAACACCTCAT
CAATGCATGACCACCTCATCATTATTGTCGCGTGTTCCTGTAAAACAGTG
CCGCAAAGGCTGTCTGCATTCTCGATTGTTGCACGAAGGCAAAGAGCATG
CGCAGATAACTTGTGAGGAGGTCAATTTCCGTGCATGTGCTCGCCTTGAT
TACACCGCACATGCGCGCTCTTCGAATGGATTTTGCGTGCCATACCGCTG
TGCGCATAGCGGCCTATCATCTTGGCGGTCAGTGTGGCGCGGGGCGATGA
CCTTGTGGCTTTCATCTGATGCCCGGTCACGTACCCCATTCGAGCCGCCT
ACTTTCAACCCTCATCCCACCACAGACACCCACTCCCACACACTCCTCCA
CCCCGACAGGCCATGGTATTAACACCAAGGTATTAAAACTAACAATAGGG
CAAGCACACCTGCACCCGCACCCATTACCACCGCAAGGGGCCATGGTCTT
GATATCAAGGAGAAAAGGGCGCAGCGAAGGCTCCCTCCCGTTGCTGCTGC
TGGTGCTGTTGCTCATAGTGCACAACCTCGGTCAAGTCCTAGGATCGGCG
GTGGTCACCACCAGTGCCACTCTCACCACCACCTTCCCTGATCACATCGA
CCTGGCCTATGACATTGATCAACGCCTTCTCGAAAACCGTGCTTGCGAAG
ATCTGAGTGACTGCAGAAGCTGCTTTCGGACACCCGGCTGTGGATTCTGC
GGTGGCACCGGACAATGCATGCCTGAAGCCCATGCAAGCACCTGTGGAAA
AGGGTGGAGCAACGCTGGGGTGTGCTATACGACCTGCCCAGTGGAATCTG
TCCCTTTTCACGACGCTGCTGGTGTGATTCAGCTGGGTGCCCAAGCGCCA
CGGCCGGTTAAGTACATTCCGGGGGATGCGTGCACGTATACAATTTGGCC
ATTACTGGACACTGGGACAACAGGCGGTAATGGTCCCACGGGGGGGAATC
GACGAACGTTGATGATTCGTTTGCAGTTCGAGTACATGGATCTGGGGCCT
GGTGATAGCCTCAGCATATTTTCCAATGGGCTCGACGGACCGAAGATCCT
GTCGATTGGCGGGAATGGGGAGGGGGTTGTGAATAGGATTATAACGAGTC
GCTCGAGCTCAGTGGTGCTGCGGCTGAACGCGAATGGCCATGAAGGAGGG
ACTGGCTTTCGGGTTTATTGGCGGGTAATTGAAAATTCGCCCTTGGACAT
TTATTTGATCTCTGCGATCATAGTTACCTCCATCCTAACCTGCATCCTCT
GCTCGTGCTGTTGCAACAACTGCGTGGCGATGATGGTGGGGCAGCACCAC
GACGATGGCGTTGGGGGAGGGGGCATGGGCCGCTTCGGATTGTCTTTTGG
AGTAGGCGCTCGTGCTGCTGGTGCTGCTGGTGCAACAGGTCGTGGGATGG
CACGCGCCCTCTCCGCGCAGGAAAAAGCACGCTTGCCCATAGCGCCATAT
GACCCGGGGCCGGGGGCCGGGGGGGAGGAAGGGAAGGAGGGTGGGAAGGA
GGGAGGGCTTGAGAATGGACCGTCCTCGATTTTTCAGTGTGACATGAGGG
AGTGTTGCATTTGTCTGAGTGACTTCGAGAGGACGGATTTGGTGAGAAAA
TTGCCATGTGGGCATCTGTTTCATTCAGAGTGCGTGGATAGCTGGTTCTC
TTTCAACTCTGTCTGCCCCTTATGCAAAGCCAACGTTCTCGACAAGCTCA
ATCAATATCCTCTTCCAGAAGGGGTGGATGGAGGGAGTGGAGGAGGAATG
GGTCCGCGGGCGCTTATCGACCTCCTCCGTCAGCGCATGCTAGTGCACGT
TCGGCGTAACCCCCCTCGTGCTCGGACTTATCCAGCTGCTGCCGCTGCTG
CTCCTGCTGCTCCTGTGCTTGCTGCTGGAGGAGGGGTAGGAGGAGAGAGG
GAGGAGGAAGGGAGGGAGGATGGGTTGGGTGGAGGAGGGTGGTTGCGTTG
GTGGGGCTCCAGGCGATATGCTCCATCATCAACGGCAGGAGGAGGGGGAG
GAGGAGAGGGGGAAGAAAGAGAAGGGGAGCAGGAGGAGGAGGAATTGGAG
GAGGAAACGGAGGAGGAGGAGCATGTGATGGTTTTCCAGCTTTCGCCCGA
GAGGCGAGGAGGAGGAGGAGGAGAAGGAGAAGGAGGAGGAGGAGGAGGAG
GAGGAGACGGAGGAGGAGGAGATGTAGAGCTTGGAGAAATGGAGGGAGAG
ATGGAGGAGGGGCAGGAGAGGAGGAATGAAAATGTGATGGCAATGGCCCA
ATAAGACGAAGCGGAGGTGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGG
AG

protein sequence of NO01G03740.1

>NO01G03740.1-protein ID=NO01G03740.1-protein|Name=NO01G03740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bp
MPGHVPHSSRLLSTLIPPQTPTPTHSSTPTGHGINTKVLKLTIGQAHLHP
HPLPPQGAMVLISRRKGRSEGSLPLLLLVLLLIVHNLGQVLGSAVVTTSA
TLTTTFPDHIDLAYDIDQRLLENRACEDLSDCRSCFRTPGCGFCGGTGQC
MPEAHASTCGKGWSNAGVCYTTCPVESVPFHDAAGVIQLGAQAPRPVKYI
PGDACTYTIWPLLDTGTTGGNGPTGGNRRTLMIRLQFEYMDLGPGDSLSI
FSNGLDGPKILSIGGNGEGVVNRIITSRSSSVVLRLNANGHEGGTGFRVY
WRVIENSPLDIYLISAIIVTSILTCILCSCCCNNCVAMMVGQHHDDGVGG
GGMGRFGLSFGVGARAAGAAGATGRGMARALSAQEKARLPIAPYDPGPGA
GGEEGKEGGKEGGLENGPSSIFQCDMRECCICLSDFERTDLVRKLPCGHL
FHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEGVDGGSGGGMGPRALI
DLLRQRMLVHVRRNPPRARTYPAAAAAAPAAPVLAAGGGVGGEREEEGRE
DGLGGGGWLRWWGSRRYAPSSTAGGGGGGEGEEREGEQEEEELEEETEEE
EHVMVFQLSPERRGGGGGEGEGGGGGGGGDGGGGDVELGEMEGEMEEGQE
RRNENVMAMAQ*

mRNA from alignment at chr1:998435..1003305+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G03740.1 ID=NO01G03740.1|Name=NO01G03740.1|organism=Nannochloropsis oceanica|type=mRNA|length=4871bp|location=Sequence derived from alignment at chr1:998435..1003305+ (Nannochloropsis oceanica)
TTCCCCCTGCTCTGTGTCTATTGTTACTTCATTATTTCACGCTTCGAACA
ACGCGTTGCGAACAAATCGGAGTCTTTTTTTGAATCCCCCCCCCACTCCT
CCCTCCTCTTTTAATTTATCAACCGCCGTCTTCTTCCCCGCCGTCGTCGC
TCTTCGTCTTCGTCCTCCTTCACTCGCAACAACCCCTCCTCTTCCTCCTC
CTCTTCCCACCCCCTTCTCACCCTCCCTCCCCTCTTCATACTCCCCTCCC
AAATACTCGCAAACATGTCCTCGTCTCCACGACTGTACCCATCACTCCCG
CCTTCGAAAATTTTATCCAATCCCTCTAGCTCGTCTTCCTCTTCCAAAAA
GTCCATCGACATCGCCTCCTCCTCCTCTTCCTCCTCCCCCTCCTCCCCCA
TGCCCAACTTCAACCCCAAACCCTCCTTCCGCCGCCTCTTCCTATTCTCC
TCCTCCTTTTTCAGCTTGTTTCCCAAAAAAGCCTTAAAGGGAACCTTATC
TATGTAGGGATACTCTCCCACCCACGCCCCCGCGGCCGGCACAAACAAAT
CCGACACCCCCAGCAATTCCTCAAACTCCGGCGTCTCACTCAACACCAAA
CCCTCGCATCGCATCCCCGGCCTCACCCTCTTATAACTAGGCAACACAGG
AGCATACACCCTCAATTTACGCCCTTCTTCGTCCTCCACACACATGACCA
TTGCCTCCGGTCTATTATATTCCTCTGCCTGGGTTATCCTGCCTACCCTC
ACCACCTTCCCACTAAACAGCGCCCCGAACACTCCCTCATCCCGCGGATG
CCGTGCAAAATAACCCCCCCTAAAACTTAGATTCCGGCGATATGCTGCCA
GGCCCGGCGCCAGGATCCAATAAAACAAAAATACCGTTCCCAAAATCGTG
GCTGCTGGTAGCCCTATCAGGAAGGTCAAGAACCAGCTGATCCACAACCC
GAAGAAGGTGGACGAGGCCGCTTCATAAATCTTTCCGAATTTATCGCTTT
CCGTGATACCCCAGTAGTACTTCCATTGGTCGCCCGTGAATTGTGAGGGG
AGGAGACGACGGAGGGTGCGGTCCCGGAGGACGGTCAACCCGCAAGTGAT
GGCGCCACATGTACGACCGTGGAAATGGCGATTGCGCAGGTGGAGGGTGG
CGCTGTGCCCGTTGCACGGGAGGGAGGGGGCAAGTCCAAAGGCGAGAGGA
GAGCTGGTGGCTCGGCGATGACGGGGAGAGAAAAAGTGAGCGGGAGAAGA
GGAAGAGTATGGAGATGGCGGGTTGTGAAACGGGAGTTGTTGCTGCGGGA
GGGGCTGGGGGGTGAAAAAGGATAGGGAAAGGGAAAGAGATGGTGAGTGT
GAGCTGTGGGCTAAAAAGGAAAGGGGTGGACATAAGAATGAGATACCAGA
TTCATCAAGATGGGGTCTGCCGAACTGATTCCTCAGGACGACCAGGGCAT
GATGGAGTGAGGCGGGAGGACAGGCAAGATCACAGCCACAAGCGACCACA
GCAAACAGGAAACCTGCAAAGGGTTGCTGCATCAAAGTGAGGCTAATTTG
GACTTACCATGAGGCTACTGCTGCAGCAAGGAGTCGCAAGCGGCATAATG
GATGATGATAATGCTGAGGGCGGCATCATTACTTTGACTAGAACAGGCCT
TGTAGACCCCGCCGGAGATGACTACCACTTGTGCCCTGCGACGGTTGTCC
GTGTTCTCTTTTAATTGTCTTAGTTGGCGTAAGTGTAGATTTATGCGTAG
GTTAGGGGTCAAAAGTATTGCTCTACTTGTTTTTTTAAAGTTCAAGAAAG
CTCAAGCTCATCGGGGTCAAGATGACGTACAAAGCACTCGCCCATCTTCT
ACTTTTACCCTCAAGATAACATATCCTACAAATCCTGCAGGCCAAGGCAT
AAGGGACACTAGATTGAACCTGTTTGCTGTGTGCTTTTGTTGAGACCCTC
TTAGGCCTGTGCCTCCCATCCAGCCACCGCGGCTGCTCCCTAACAGAACA
ACTGGAGCCTGAAAAATAGAACTGATAATGTACACATGCCAACACCTCAT
CAATGCATGACCACCTCATCATTATTGTCGCGTGTTCCTGTAAAACAGTG
CCGCAAAGGCTGTCTGCATTCTCGATTGTTGCACGAAGGCAAAGAGCATG
CGCAGATAACTTGTGAGGAGGTCAATTTCCGTGCATGTGCTCGCCTTGAT
TACACCGCACATGCGCGCTCTTCGAATGGATTTTGCGTGCCATACCGCTG
TGCGCATAGCGGCCTATCATCTTGGCGGTCAGTGTGGCGCGGGGCGATGA
CCTTGTGGCTTTCATCTGATGCCCGGTCACGTACCCCATTCGAGCCGCCT
ACTTTCAACCCTCATCCCACCACAGACACCCACTCCCACACACTCCTCCA
CCCCGACAGGCCATGGTATTAACACCAAGGTATTAAAACTAACAATAGGG
CAAGCACACCTGCACCCGCACCCATTACCACCGCAAGGGGCCATGGTCTT
GATATCAAGGAGAAAAGGGCGCAGCGAAGGCTCCCTCCCGTTGCTGCTGC
TGGTGCTGTTGCTCATAGTGCACAACCTCGGTCAAGTCCTAGGATCGGCG
GTGGTCACCACCAGTGCCACTCTCACCACCACCTTCCCTGATCACATCGA
CCTGGCCTATGACATTGATCAACGCCTTCTCGAAAACCGTGCTTGCGAAG
ATCTGAGTGACTGCAGAAGCTGCTTTCGGACACCCGGCTGTGGATTCTGC
GGTGGCACCGGACAATGCATGCCTGAAGCCCATGCAAGCACCTGTGGAAA
AGGGTGGAGCAACGCTGGGGTGTGCTATACGACCTGCCCAGTGGAATCTG
TCCCTTTTCACGACGCTGCTGGTGTGATTCAGCTGGGTGCCCAAGCGCCA
CGGCCGGTTAAGTACATTCCGGGGGATGCGTGCACGTATACAATTTGGCC
ATTACTGGACACTGGGACAACAGGCGGTAATGGTCCCACGGGGGGGAATC
GACGAACGTTGATGATTCGTTTGCAGTAAGTTTGAAGCCATAAGGGTTTG
GGCACAGGGTGAAGAGGGACGAAGAGAGACATGCCTCAAGCTTTCTTCTT
CTTTCATTCTTTTCAATAGGTTCGAGTACATGGATCTGGGGCCTGGTGAT
AGCCTCAGCATATTTTCCAATGGGCTCGACGGACCGAAGATCCTGTCGAT
TGGCGGGAATGGGGAGGGGGTTGTGAATAGGATTATAACGAGTCGCTCGA
GCTCAGTGGTGCTGCGGCTGAACGCGAATGGCCATGAAGGAGGGACTGGC
TTTCGGGTTTATTGGCGGGTAATTGAAAATTCGCCCTTGGACATTTATTT
GATCTCTGCGATCATAGGTGAGCTGGGTTGCAGGGGTGGATGGGAGGGTG
GGAGGGAGGGAGGGTGAGAGGGAGGGAGGGAGGGAGTGTGAGAAGGAAGG
AGGGAGGCTTTGCATTGGTTCTTTCTTTTTCTACGTCGTGGAATCACGCT
CTCAGATTCGTACCCTCCCTTCCTTTCTCTCATTTTCTTTCCAGTTACCT
CCATCCTAACCTGCATCCTCTGCTCGTGCTGTTGCAACAACTGCGTGGCG
ATGATGGTGGGGCAGCACCACGACGATGGCGTTGGGGGAGGGGGCATGGG
CCGCTTCGGATTGTCTTTTGGAGTAGGCGCTCGTGCTGCTGGTGCTGCTG
GTGCAACAGGTCGTGGGATGGCACGCGCCCTCTCCGCGCAGGAAAAAGCA
CGCTTGCCCATAGCGCCATATGACCCGGGGCCGGGGGCCGGGGGGGAGGA
AGGGAAGGAGGGTGGGAAGGAGGGAGGGCTTGAGAATGGACCGTCCTCGA
TTTTTCAGTGTGACATGAGGGAGTGTTGCATTTGTCTGAGTGACTTCGAG
AGGACGGATTTGGTGAGAAAATTGCCATGTGGGCATCTGTTTCATTCAGA
GGTAGGCATGGAGAAAGGAGGGAGGGAGGGAGAGAAGGGATTTGGCACTT
ATTATGACTCACTCTCTCACTCAATCTTTGCTTCTCACCTTCCTTCTCTA
CCTCCCTACCTCCTTCCCAATAATGTAGTAATTCACGGCTTCCATCAACG
CTTGTCTTCTCTGAAGACCAACGTCGCTCACTTCCTCCCCCCCCACCTCC
TTCCCTCCCTTCCTCCCGCCCTTCCTCCCGCCCTTCCTCCCAACCACAGT
GCGTGGATAGCTGGTTCTCTTTCAACTCTGTCTGCCCCTTATGCAAAGCC
AACGTTCTCGACAAGCTCAATCAATATCCTCTTCCAGAAGGGGTGGATGG
AGGGAGTGGAGGAGGAATGGGTCCGCGGGCGCTTATCGACCTCCTCCGTC
AGCGCATGCTAGTGCACGTTCGGCGTAACCCCCCTCGTGCTCGGACTTAT
CCAGCTGCTGCCGCTGCTGCTCCTGCTGCTCCTGTGCTTGCTGCTGGAGG
AGGGGTAGGAGGAGAGAGGGAGGAGGAAGGGAGGGAGGATGGGTTGGGTG
GAGGAGGGTGGTTGCGTTGGTGGGGCTCCAGGCGATATGCTCCATCATCA
ACGGCAGGAGGAGGGGGAGGAGGAGAGGGGGAAGAAAGAGAAGGGGAGCA
GGAGGAGGAGGAATTGGAGGAGGAAACGGAGGAGGAGGAGCATGTGATGG
TTTTCCAGCTTTCGCCCGAGAGGCGAGGAGGAGGAGGAGGAGAAGGAGAA
GGAGGAGGAGGAGGAGGAGGAGGAGACGGAGGAGGAGGAGATGTAGAGCT
TGGAGAAATGGAGGGAGAGATGGAGGAGGGGCAGGAGAGGAGGAATGAAA
ATGTGATGGCAATGGCCCAATAAGACGAAGCGGAGGTGGAGGAGGAAGAG
GAGGAGGAGGAGGAGGAGGAG

Coding sequence (CDS) from alignment at chr1:998435..1003305+

>NO01G03740.1 ID=NO01G03740.1|Name=NO01G03740.1|organism=Nannochloropsis oceanica|type=CDS|length=1986bp|location=Sequence derived from alignment at chr1:998435..1003305+ (Nannochloropsis oceanica)
ATGCCCGGTCACGTACCCCATTCGAGCCGCCTACTTTCAACCCTCATCCC
ACCACAGACACCCACTCCCACACACTCCTCCACCCCGACAGGCCATGGTA
TTAACACCAAGGTATTAAAACTAACAATAGGGCAAGCACACCTGCACCCG
CACCCATTACCACCGCAAGGGGCCATGGTCTTGATATCAAGGAGAAAAGG
GCGCAGCGAAGGCTCCCTCCCGTTGCTGCTGCTGGTGCTGTTGCTCATAG
TGCACAACCTCGGTCAAGTCCTAGGATCGGCGGTGGTCACCACCAGTGCC
ACTCTCACCACCACCTTCCCTGATCACATCGACCTGGCCTATGACATTGA
TCAACGCCTTCTCGAAAACCGTGCTTGCGAAGATCTGAGTGACTGCAGAA
GCTGCTTTCGGACACCCGGCTGTGGATTCTGCGGTGGCACCGGACAATGC
ATGCCTGAAGCCCATGCAAGCACCTGTGGAAAAGGGTGGAGCAACGCTGG
GGTGTGCTATACGACCTGCCCAGTGGAATCTGTCCCTTTTCACGACGCTG
CTGGTGTGATTCAGCTGGGTGCCCAAGCGCCACGGCCGGTTAAGTACATT
CCGGGGGATGCGTGCACGTATACAATTTGGCCATTACTGGACACTGGGAC
AACAGGCGGTAATGGTCCCACGGGGGGGAATCGACGAACGTTGATGATTC
GTTTGCAGTTCGAGTACATGGATCTGGGGCCTGGTGATAGCCTCAGCATA
TTTTCCAATGGGCTCGACGGACCGAAGATCCTGTCGATTGGCGGGAATGG
GGAGGGGGTTGTGAATAGGATTATAACGAGTCGCTCGAGCTCAGTGGTGC
TGCGGCTGAACGCGAATGGCCATGAAGGAGGGACTGGCTTTCGGGTTTAT
TGGCGGGTAATTGAAAATTCGCCCTTGGACATTTATTTGATCTCTGCGAT
CATAGTTACCTCCATCCTAACCTGCATCCTCTGCTCGTGCTGTTGCAACA
ACTGCGTGGCGATGATGGTGGGGCAGCACCACGACGATGGCGTTGGGGGA
GGGGGCATGGGCCGCTTCGGATTGTCTTTTGGAGTAGGCGCTCGTGCTGC
TGGTGCTGCTGGTGCAACAGGTCGTGGGATGGCACGCGCCCTCTCCGCGC
AGGAAAAAGCACGCTTGCCCATAGCGCCATATGACCCGGGGCCGGGGGCC
GGGGGGGAGGAAGGGAAGGAGGGTGGGAAGGAGGGAGGGCTTGAGAATGG
ACCGTCCTCGATTTTTCAGTGTGACATGAGGGAGTGTTGCATTTGTCTGA
GTGACTTCGAGAGGACGGATTTGGTGAGAAAATTGCCATGTGGGCATCTG
TTTCATTCAGAGTGCGTGGATAGCTGGTTCTCTTTCAACTCTGTCTGCCC
CTTATGCAAAGCCAACGTTCTCGACAAGCTCAATCAATATCCTCTTCCAG
AAGGGGTGGATGGAGGGAGTGGAGGAGGAATGGGTCCGCGGGCGCTTATC
GACCTCCTCCGTCAGCGCATGCTAGTGCACGTTCGGCGTAACCCCCCTCG
TGCTCGGACTTATCCAGCTGCTGCCGCTGCTGCTCCTGCTGCTCCTGTGC
TTGCTGCTGGAGGAGGGGTAGGAGGAGAGAGGGAGGAGGAAGGGAGGGAG
GATGGGTTGGGTGGAGGAGGGTGGTTGCGTTGGTGGGGCTCCAGGCGATA
TGCTCCATCATCAACGGCAGGAGGAGGGGGAGGAGGAGAGGGGGAAGAAA
GAGAAGGGGAGCAGGAGGAGGAGGAATTGGAGGAGGAAACGGAGGAGGAG
GAGCATGTGATGGTTTTCCAGCTTTCGCCCGAGAGGCGAGGAGGAGGAGG
AGGAGAAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGACGGAGGAGGAG
GAGATGTAGAGCTTGGAGAAATGGAGGGAGAGATGGAGGAGGGGCAGGAG
AGGAGGAATGAAAATGTGATGGCAATGGCCCAATAA

Synonyms

Publications