NO01G02150.1, NO01G02150.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G02150.1
Unique NameNO01G02150.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1395
Alignment locationchr1:545534..546928 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:545534..546928 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO01G02150.1 vs.
Match: EWM29204.1 (mitoferrin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 640.2 bits (1650), Expect = 5.000e-180
Identity = 340/466 (72.96%), Postives = 377/466 (80.90%), Query Frame = 0 
Query:    1 MDRIIGFLASSGTRAAPAECHGIGGSDADLDWEDWDPKAGSFVHHMIAGSLAGIAEHTVMYPVDTIKTFVQCQECNVTANCMKQQTMAAATATATVGDGRRRAASAVARAAVVVEGA-GMTSLEAASRLVQREGVFRLWRGVSSMLSACVPAHAAYFSALESCKESFGVNGREHNVGGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYTGLLNCAASIARQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRMLKPAGDYNTGTYLFAGSGAGALAAAATTPLDLIKTRLQTQVTLRGTPLAAAVVGADVDIYDPCTHRGSKGAGSVHAASSSGLHHPTSAAATPLAASHGATSPPGTAGVRAAPHSLPTTAPVRSHVTSSSDGGCLRAEHTRLRYKGILDAARQIHAAEGVVGFFRGMLPRLLVHTPSVAISWTTYETVKDFLRSNYPASSS--SASLIPPE 464
            M++II FL S G + APAECHGIGG DADLDWEDWDPK GSFVHHMIAGS+AGIAEHT+MYPVDTIKTF+QCQEC++TANC+KQ+T+ AA A  +   GR     A AR A VVEG+ G+TS EAA RLVQ+EG  RLWRGVS+MLSACVPAHAAYFSALESCKE FGVNGREHNV GAAAAGAVATLFHDSIMTPMDVIKQRLQLGYY GL +CA SI RQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKR+LKPAGDY TGTYL AGSGAGALAAAATTPLDLIKTRLQTQVT++ T       G       P      +G G++H  S  G H PTSA+ +PLAA+H A SP G+    + P SLP   P+RSHVTSSSDGGC RAEHTRLRYKGI+DAA+QIHAAEG +GFFRGM+PRLLVHTPSVAISWTTYETVKD L   Y ++ +  S   +PPE
Sbjct:    1 MEQIIAFLVSGGRQTAPAECHGIGGGDADLDWEDWDPKTGSFVHHMIAGSIAGIAEHTLMYPVDTIKTFMQCQECSLTANCLKQRTVVAAAAAVS---GREGLGEAAARGASVVEGSVGLTSFEAAFRLVQKEGTLRLWRGVSTMLSACVPAHAAYFSALESCKERFGVNGREHNVMGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYKGLAHCAVSIVRQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRLLKPAGDYTTGTYLLAGSGAGALAAAATTPLDLIKTRLQTQVTIQTT----RSTGHAPHGRPPGAGEVGRGNGALHTVSP-GFHRPTSASMSPLAAAHEAMSPAGSRVSPSVPPSLPPVPPLRSHVTSSSDGGCRRAEHTRLRYKGIMDAAKQIHAAEGAMGFFRGMVPRLLVHTPSVAISWTTYETVKDMLSMGYFSTGTPPSPPSVPPE 458
The following BLAST results are available for this feature:
BLAST of NO01G02150.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29204.15.000e-18072.96mitoferrin-like protein [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02150NO01G02150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G02150.1NO01G02150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G02150.1.cds1NO01G02150.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G02150.1 ID=NO01G02150.1|Name=NO01G02150.1|organism=Nannochloropsis oceanica|type=mRNA|length=1395bp
ATGGACCGCATAATAGGCTTTTTGGCCTCAAGCGGGACACGTGCAGCCCC
TGCAGAATGTCATGGGATTGGAGGTAGTGATGCGGACTTGGACTGGGAGG
ATTGGGACCCGAAGGCGGGGTCATTTGTGCATCATATGATTGCGGGGAGT
TTAGCTGGCATAGCCGAGCATACAGTTATGTATCCCGTGGACACCATCAA
GACCTTTGTCCAGTGCCAAGAATGTAATGTGACGGCAAATTGTATGAAGC
AGCAGACGATGGCCGCGGCGACGGCGACGGCGACTGTTGGTGATGGGAGA
CGGAGAGCTGCATCAGCGGTGGCAAGAGCGGCGGTAGTCGTGGAAGGCGC
GGGGATGACTTCCTTGGAGGCGGCCTCACGCTTGGTCCAACGAGAAGGGG
TGTTTCGGCTTTGGCGAGGGGTGAGCTCAATGTTGTCAGCGTGTGTGCCT
GCTCATGCTGCGTATTTTAGTGCACTCGAATCGTGTAAGGAAAGTTTTGG
AGTGAATGGACGTGAGCACAACGTTGGAGGAGCAGCAGCAGCTGGAGCAG
TGGCGACGCTTTTTCACGATTCTATTATGACACCCATGGACGTGATAAAG
CAACGTCTGCAGTTAGGGTACTATACGGGCTTGCTGAATTGTGCTGCATC
GATCGCGCGGCAGGAGGGGGTACGGGCGTTCTATCTGAGCTTACCCGTGA
CTCTGTTTATGAATTTACCGTACGGCGGGGTAATGGTCGCCGCGAATGAG
AGCATCAAGCGCATGCTCAAGCCTGCGGGCGACTATAACACAGGCACTTA
CCTTTTCGCCGGCTCAGGGGCCGGGGCCTTGGCTGCTGCTGCGACTACTC
CCTTAGATTTGATCAAGACGCGGCTCCAAACCCAAGTCACGTTGCGTGGG
ACCCCTCTGGCTGCTGCTGTCGTTGGCGCTGATGTCGATATTTACGATCC
CTGCACTCATAGAGGCAGCAAAGGAGCAGGATCAGTGCATGCTGCATCCT
CTTCGGGTCTACACCACCCTACTTCCGCTGCCGCCACTCCTCTAGCCGCC
AGCCACGGAGCAACCAGCCCACCGGGAACTGCGGGAGTGCGAGCAGCGCC
TCACTCCCTTCCTACCACTGCTCCAGTGCGGAGCCATGTGACATCCTCAT
CAGATGGGGGCTGTCTACGTGCAGAGCACACACGATTAAGGTACAAGGGA
ATCCTGGACGCGGCCAGGCAGATCCACGCAGCGGAGGGAGTGGTGGGATT
TTTCCGAGGGATGTTGCCGCGGTTGCTGGTACACACACCATCTGTTGCGA
TTAGTTGGACGACGTATGAGACAGTTAAGGATTTCTTGAGAAGTAACTAC
CCGGCATCTTCCTCCTCTGCGTCGCTGATACCGCCAGAGATCTGA
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protein sequence of NO01G02150.1

>NO01G02150.1-protein ID=NO01G02150.1-protein|Name=NO01G02150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MDRIIGFLASSGTRAAPAECHGIGGSDADLDWEDWDPKAGSFVHHMIAGS
LAGIAEHTVMYPVDTIKTFVQCQECNVTANCMKQQTMAAATATATVGDGR
RRAASAVARAAVVVEGAGMTSLEAASRLVQREGVFRLWRGVSSMLSACVP
AHAAYFSALESCKESFGVNGREHNVGGAAAAGAVATLFHDSIMTPMDVIK
QRLQLGYYTGLLNCAASIARQEGVRAFYLSLPVTLFMNLPYGGVMVAANE
SIKRMLKPAGDYNTGTYLFAGSGAGALAAAATTPLDLIKTRLQTQVTLRG
TPLAAAVVGADVDIYDPCTHRGSKGAGSVHAASSSGLHHPTSAAATPLAA
SHGATSPPGTAGVRAAPHSLPTTAPVRSHVTSSSDGGCLRAEHTRLRYKG
ILDAARQIHAAEGVVGFFRGMLPRLLVHTPSVAISWTTYETVKDFLRSNY
PASSSSASLIPPEI*
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mRNA from alignment at chr1:545534..546928-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G02150.1 ID=NO01G02150.1|Name=NO01G02150.1|organism=Nannochloropsis oceanica|type=mRNA|length=1395bp|location=Sequence derived from alignment at chr1:545534..546928- (Nannochloropsis oceanica)
ATGGACCGCATAATAGGCTTTTTGGCCTCAAGCGGGACACGTGCAGCCCC
TGCAGAATGTCATGGGATTGGAGGTAGTGATGCGGACTTGGACTGGGAGG
ATTGGGACCCGAAGGCGGGGTCATTTGTGCATCATATGATTGCGGGGAGT
TTAGCTGGCATAGCCGAGCATACAGTTATGTATCCCGTGGACACCATCAA
GACCTTTGTCCAGTGCCAAGAATGTAATGTGACGGCAAATTGTATGAAGC
AGCAGACGATGGCCGCGGCGACGGCGACGGCGACTGTTGGTGATGGGAGA
CGGAGAGCTGCATCAGCGGTGGCAAGAGCGGCGGTAGTCGTGGAAGGCGC
GGGGATGACTTCCTTGGAGGCGGCCTCACGCTTGGTCCAACGAGAAGGGG
TGTTTCGGCTTTGGCGAGGGGTGAGCTCAATGTTGTCAGCGTGTGTGCCT
GCTCATGCTGCGTATTTTAGTGCACTCGAATCGTGTAAGGAAAGTTTTGG
AGTGAATGGACGTGAGCACAACGTTGGAGGAGCAGCAGCAGCTGGAGCAG
TGGCGACGCTTTTTCACGATTCTATTATGACACCCATGGACGTGATAAAG
CAACGTCTGCAGTTAGGGTACTATACGGGCTTGCTGAATTGTGCTGCATC
GATCGCGCGGCAGGAGGGGGTACGGGCGTTCTATCTGAGCTTACCCGTGA
CTCTGTTTATGAATTTACCGTACGGCGGGGTAATGGTCGCCGCGAATGAG
AGCATCAAGCGCATGCTCAAGCCTGCGGGCGACTATAACACAGGCACTTA
CCTTTTCGCCGGCTCAGGGGCCGGGGCCTTGGCTGCTGCTGCGACTACTC
CCTTAGATTTGATCAAGACGCGGCTCCAAACCCAAGTCACGTTGCGTGGG
ACCCCTCTGGCTGCTGCTGTCGTTGGCGCTGATGTCGATATTTACGATCC
CTGCACTCATAGAGGCAGCAAAGGAGCAGGATCAGTGCATGCTGCATCCT
CTTCGGGTCTACACCACCCTACTTCCGCTGCCGCCACTCCTCTAGCCGCC
AGCCACGGAGCAACCAGCCCACCGGGAACTGCGGGAGTGCGAGCAGCGCC
TCACTCCCTTCCTACCACTGCTCCAGTGCGGAGCCATGTGACATCCTCAT
CAGATGGGGGCTGTCTACGTGCAGAGCACACACGATTAAGGTACAAGGGA
ATCCTGGACGCGGCCAGGCAGATCCACGCAGCGGAGGGAGTGGTGGGATT
TTTCCGAGGGATGTTGCCGCGGTTGCTGGTACACACACCATCTGTTGCGA
TTAGTTGGACGACGTATGAGACAGTTAAGGATTTCTTGAGAAGTAACTAC
CCGGCATCTTCCTCCTCTGCGTCGCTGATACCGCCAGAGATCTGA
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Coding sequence (CDS) from alignment at chr1:545534..546928-

>NO01G02150.1 ID=NO01G02150.1|Name=NO01G02150.1|organism=Nannochloropsis oceanica|type=CDS|length=1395bp|location=Sequence derived from alignment at chr1:545534..546928- (Nannochloropsis oceanica)
ATGGACCGCATAATAGGCTTTTTGGCCTCAAGCGGGACACGTGCAGCCCC
TGCAGAATGTCATGGGATTGGAGGTAGTGATGCGGACTTGGACTGGGAGG
ATTGGGACCCGAAGGCGGGGTCATTTGTGCATCATATGATTGCGGGGAGT
TTAGCTGGCATAGCCGAGCATACAGTTATGTATCCCGTGGACACCATCAA
GACCTTTGTCCAGTGCCAAGAATGTAATGTGACGGCAAATTGTATGAAGC
AGCAGACGATGGCCGCGGCGACGGCGACGGCGACTGTTGGTGATGGGAGA
CGGAGAGCTGCATCAGCGGTGGCAAGAGCGGCGGTAGTCGTGGAAGGCGC
GGGGATGACTTCCTTGGAGGCGGCCTCACGCTTGGTCCAACGAGAAGGGG
TGTTTCGGCTTTGGCGAGGGGTGAGCTCAATGTTGTCAGCGTGTGTGCCT
GCTCATGCTGCGTATTTTAGTGCACTCGAATCGTGTAAGGAAAGTTTTGG
AGTGAATGGACGTGAGCACAACGTTGGAGGAGCAGCAGCAGCTGGAGCAG
TGGCGACGCTTTTTCACGATTCTATTATGACACCCATGGACGTGATAAAG
CAACGTCTGCAGTTAGGGTACTATACGGGCTTGCTGAATTGTGCTGCATC
GATCGCGCGGCAGGAGGGGGTACGGGCGTTCTATCTGAGCTTACCCGTGA
CTCTGTTTATGAATTTACCGTACGGCGGGGTAATGGTCGCCGCGAATGAG
AGCATCAAGCGCATGCTCAAGCCTGCGGGCGACTATAACACAGGCACTTA
CCTTTTCGCCGGCTCAGGGGCCGGGGCCTTGGCTGCTGCTGCGACTACTC
CCTTAGATTTGATCAAGACGCGGCTCCAAACCCAAGTCACGTTGCGTGGG
ACCCCTCTGGCTGCTGCTGTCGTTGGCGCTGATGTCGATATTTACGATCC
CTGCACTCATAGAGGCAGCAAAGGAGCAGGATCAGTGCATGCTGCATCCT
CTTCGGGTCTACACCACCCTACTTCCGCTGCCGCCACTCCTCTAGCCGCC
AGCCACGGAGCAACCAGCCCACCGGGAACTGCGGGAGTGCGAGCAGCGCC
TCACTCCCTTCCTACCACTGCTCCAGTGCGGAGCCATGTGACATCCTCAT
CAGATGGGGGCTGTCTACGTGCAGAGCACACACGATTAAGGTACAAGGGA
ATCCTGGACGCGGCCAGGCAGATCCACGCAGCGGAGGGAGTGGTGGGATT
TTTCCGAGGGATGTTGCCGCGGTTGCTGGTACACACACCATCTGTTGCGA
TTAGTTGGACGACGTATGAGACAGTTAAGGATTTCTTGAGAAGTAACTAC
CCGGCATCTTCCTCCTCTGCGTCGCTGATACCGCCAGAGATCTGA
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Synonyms
Publications