jgi.p|Nanoce1779_2|627348, gene_939 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|627348
Unique Namegene_939
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:800944..802569 +

Link to JBrowse

Properties
Property NameValue
TranscriptId627434
ProteinId627348
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:800944..802569 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03510NO02G03510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627348mRNA_939-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627348mRNA_939Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|627348

>mRNA_939-protein ID=mRNA_939-protein|Name=jgi.p|Nanoce1779_2|627348|organism=Nannochloropsis oceanica|type=polypeptide|length=391bp
MGLMHSSHNKRAHVIKELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPR
FAGLEDKHNGTKECPICFLRHVVLNRTSCCRHGLCTECYLQVRKPKGTSP
CPYCQNSKLQILYGTDDEEKMATQELANIRHYDVLTASPQSIPVAMFSSS
RSKEEAQEAWAVATQTSSGPAAHAVASPVAPCAASGSGYTAKNSRVESES
HINSSRTTAGSLRGSSSSKNSYMGVIPYATVKQRSQIEEEMRKQHLTPTL
GEELGENTTAAAAAATALLFSFRGADCQGGGGAGAGGERVGRGGGEEVER
RAAQAQSYPRAHEDFVMRRALLESFGVPAHLQHVEDLMLMEAIQRSLEET
GDGAGGGGGGGEGGGEGGGGREGAGGRGGGKEEVERGLGG*
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Synonyms
Publications