jgi.p|Nanoce1779_2|301684, gene_9065 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|301684
Unique Namegene_9065
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_40:41225..44438 -

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Properties
Property NameValue
TranscriptId301770
ProteinId301684
Product nameSacI homology domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_40supercontigscaffold_40:41225..44438 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL060ncniL060Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO18G01360NO18G01360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|301684mRNA_9065-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|301684mRNA_9065Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|301684

>mRNA_9065-protein ID=mRNA_9065-protein|Name=jgi.p|Nanoce1779_2|301684|organism=Nannochloropsis oceanica|type=polypeptide|length=971bp
MLGGGVCKGGRKKKRNNLPINGGLVWGNPILTTSSSSSTASSGPSPQAPI
TTRKHSFLLYLTVKPDYLVLRAPCGAHSTKTQQALDPILVLRAPPATPRS
NGVAPAVASSNPSPTTCPDTKVTFEVKDFQTAVRDGDMLGNEVEREIQGV
LGLIYLLGGAYLVTIEASEIVGSAPHGNGGSSRTNSRTSPSTASTSTSTS
TNSTTSSGGSGSSNGSNGSSSSNNNNGSSSCSIHRVRKMGLVPISRRQQA
HSSSSYFQQQQHPSSLDTPDRVCDEERYLGMLQAPVVAGSLYFSPQYPLH
RRLQENAKLCPDLDFDSTAPLFWGKEESEEESEGPRGPTDDNKNYIAGNP
FPPSPSHLSSQFLWNNFLLSGLESARHFWGTACISGFASSRSIPLQRGRA
GSVATLTLISRRSTRMQGTRFWQRGGNERGEVANFVETEVVICLPLPQTD
EEGRGEEDEDEEKREVLLLSYVQVRGSIPLPWSQEPELKWQPRVRLPSIL
PPFSISSMPPAGGAGTSAVTGVAAAHFQQQLLPVYGEVLAINLVDSCGEN
SHSQAQKTLGRLFQEEVERLPGYTPSLIGEGWRKGEREGGEKTAATKMRS
SPFVGGKERQGGGEERPRLSLTWFDFHKECGSYKKWGRLHTHLLAHLDPL
IFGQGWTVVRLGRGGMINSRQQQKKKQQQQQLQQEAALMMGEGERANEWG
SLLVREQRGVVRTNCMDNLDRTNVVQSMIASRVLGKALSSLPSSSPSSPD
LPSLEQALMTLWAANADALSTLYAGTPALKTDFVLTGHRTVKGILLDGFY
ALTRLYINNFWDGYRQDCVSLWLGNYQPSRSSSSSPFPPYRLPFTPGGFC
FTLSVALQELAPYQLTLQVGPLFTEAVVSLAQALAGSAAAVSSGREARGQ
DGESPSWLVQVVFGYVMFALFWLALGECILCLGPFATLRLLRRERHLLVD
RPRLVRRGWGRQEGRVNIRK*
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Synonyms
Publications