jgi.p|Nanoce1779_2|574273, gene_828 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|574273
Unique Namegene_828
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:519615..524515 +

Link to JBrowse

Properties
Property NameValue
TranscriptId574359
ProteinId574273
Product nameactin-related protein 6
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:519615..524515 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00475987-dehydrocholesterol reductase activity
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574273mRNA_828-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574273mRNA_828Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|574273

>mRNA_828-protein ID=mRNA_828-protein|Name=jgi.p|Nanoce1779_2|574273|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MPAAAPVASPRKGGHKVHTSSNRVAGGGEGQGNMPTLVLDNGAYHLKVGF
AGDPAPRLLMPNCTAKLKGQLQLLVGDDIDLVNNTANLQYTRPFDRGYLT
NWEAENQVWKRAFGETNLKVEPEETRLVVTEAPFTPTSLSTFSTQVIFEE
FGFAACAKLPAAILSGHHYTSTQPQQEPQPQCALLGGGRINCALVIDSGF
SFTHVIPLYKNRAQRAGIRRVNVGGKLLTNFLKETVSYRQWNMMDEFQLM
NDAKEALCYVSQDFVAEMAKLRPGGGPNRRLRAHEGIRRNFVLPDFHNTM
KGYVQDEQPRLHEQYQEERKEEPEQQVLSMEVERFVVPEVLFRPSDVGLR
QGGLPEAVVEAVESCDIGLRASLYSNIILTGGNVLFPGLAQRLKTELRAL
VPEYYSLAVHTPSDPIGYAWQGGGRFAQEQPQTFVTKAQYNEYGPEACQE
HVFDVQW*
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Synonyms
Publications