jgi.p|Nanoce1779_2|550017, gene_818 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|550017
Unique Namegene_818
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:505512..506397 -

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Properties
Property NameValue
TranscriptId550103
ProteinId550017
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:505512..506397 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000907sulfonate dioxygenase activity
GO:00186022,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
GO:0019798procollagen-proline dioxygenase activity
GO:0043734DNA-N1-methyladenine dioxygenase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02310NO02G02310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550017mRNA_818-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550017mRNA_818Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|550017

>mRNA_818-protein ID=mRNA_818-protein|Name=jgi.p|Nanoce1779_2|550017|organism=Nannochloropsis oceanica|type=polypeptide|length=257bp
MSLLVVSAACRLVLSHCRKRSRPPLSCPVICHLSTSSAVASVETSHSLLD
FSNIGPPGFDTSSVQVLPDVITPEEEARLVAELEENVRRRRYVANHWDSV
IENYREVEKRGWLDPGNKALADRIKNLILHTLQRPMTLPFLPVHVIDLAN
DGFIKPHVDSVKFSGDIVSGLSLCSPAIMQLKGDKDQGMDPLSIVRLLLR
PRSLYILSGEARYKYAHEILAPSPGGERWVDGVVVARGRRLSLIFRDEKV
QQQEEI*
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Synonyms
Publications