jgi.p|Nanoce1779_2|522533, gene_730 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|522533
Unique Namegene_730
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:304021..305265 -

Link to JBrowse

Properties
Property NameValue
TranscriptId522619
ProteinId522533
Product nameFatty acid desaturase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:304021..305265 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0046914transition metal ion binding
GO:0045300acyl-[acyl-carrier-protein] desaturase activity
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL033ncniL033Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01510NO02G01510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|522533mRNA_730-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|522533mRNA_730Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|522533

>mRNA_730-protein ID=mRNA_730-protein|Name=jgi.p|Nanoce1779_2|522533|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MLSKLLLPTGEKAWQPSDFVPDLTKEGWEDEVKEFREKAETLPDETLVVL
VGDMVTEEALPTYQTLLNTFEGVDDPTGTSPSAWCRWTRGWTSEENRHGD
LLNRYLYLTGRVDMRAIECTIQHLISSGFNPKIKKDPYKGFVYTSFQERA
TKISHQNVARLANSAGDGNLGLICSKIAGDESRHEKAYQAIFQEILKKDP
EGGLKSFYELMSDQITMPAVMMTDGHDPDLFEHFSVTAQKLGVYTAVDYA
NILEYLVETWDIEHMGGLSSEGAKYQEKLCKLAPRYMRLAEMSLDRVKKM
PKTPYSWIHGRVA*
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Synonyms
Publications