jgi.p|Nanoce1779_2|125602, gene_6715 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|125602
Unique Namegene_6715
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:515188..522451 +

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Properties
Property NameValue
TranscriptId125688
ProteinId125602
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:515188..522451 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03840NO06G03840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|125602mRNA_6715-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|125602mRNA_6715Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|125602

>mRNA_6715-protein ID=mRNA_6715-protein|Name=jgi.p|Nanoce1779_2|125602|organism=Nannochloropsis oceanica|type=polypeptide|length=2131bp
MAPSPRNVSSRDDEEEKDSGLQDQGGDDYQESDSSQSVSFLGRGDEQRVD
GHFCIGADERELHKTFAVTRRPSSSNAYLQLQHAPHYQVLDEYCDAVSAS
LSLPASHPAPHVHPPLVLYGPSGVGKSALLSNWLLHHQAQREAAKFKEDF
VFWHVAGCSRSSTLTTNLLRRLQCHLKTHFGLKKEVAKDDKRLRWDLPDF
LEQASHKASQSLILILVDGLHLLRDEEGGDDLKWLPQVYPANVRLVVSTT
IYETVTTKLVVGEGACTHERDSTLLKDSGESFSMLAEEYVSLGSRMSVSL
PIVERKESSNDGDDEEGDAVFLRSKRNKTFQELCRRKWDIFRVDKMSLPA
CKELLWSCITPTMATGKQSTISPIQDSGNNNSLLALFPSHCKALLASPAS
NTPLFLRLLLQALRWSAKQNLDLWRLLTFWAEATSVIELYERILDTWEQG
LSVSSASRNEAIRRIVEEQLAKAHSPGTEMMNEWGKAGSRGSPNSYRCSN
DGVARSSFASSSTGGQDVPDELPLAEIQWRKVHADADKVIEDARVAVEEA
VSRAMAEAVETVHADKDKDLTAGITYPNEAIVQFLVHRKQQEPSKPSVLP
PLVASTAIHTSTTSEILHATVMDDRNVDDDTRVEKIALTMPMLSTTIITT
DLPVAMERTIVASSFSTAPNLCSTISADVPLYLRGGEEFEGFGNILGNTL
AALYVARHGLTVDELVHLLLDVQERDDHRLCTLLWKQKDVLLRSCHSADT
YLKESLPQHVLEGIILDRTVDALATVKLRDLRRLLHESCALNKDATVLYE
VFFNYCRAQAAQPSSITRKQQCFNNRHLTLGDGVVQQLLDILTTLGVLVP
RGDHVLVMMLESEALRQAVFNRYIQSRGNSLMNRNRSVQSRAEALGSAEN
DGIITYGEAIWHQAIIKYFQSQPSSLLRRCEELPWHLHVCQEWNALKTFL
VELDAFKMMYRGSLKGELFEYWRLLTEGPLWRPADPRPEGSSSEDLRELV
QEDGHSPPATVPKEQVVPTASPGRKMLPPFDIVESYNQSVEQWKNNSVSL
STQTLSDILRLVGYFLAEFAETVIFRSPFPRYLRKPLDLALMEMVNVDKK
EDEHLASKLFIRLLPPASSQKHNDGSNGDDTSDDDDDENVEDEDLQDDLE
HIDDWEDPEDVNDETDESDQARQRRRRRLEITQSRAALAAMDSAYYYFKR
WFWIQFPWIALANVDLALRQYFQEEVSELAVNSASSTESLHLKPQVGVVA
HEDGGTETADAIGLTLAASTTTASSQRKRFHRGQEQPLVWTIKKQDPTQI
GALAPESVQFHTMVRASTIHLAPHAANAFRMVETLFHEDPRLIKQAKRLS
SSAGCDNGGDEDGSDENDDDERDDEDGLRAAFVSGCSGLLLTRREKRVQH
SNRRVGRLRAMLDQVKAERSSIQTQLTALERQATVRDLHDEKTIRNIETG
EILMQALLMRLRCLTEALTEAKAIGLYFEQIVEQCLLKNPVNDPQRLDAL
DKQVDLATSQCDSLHHHRGLIIAEKEHLEAKEVVKIQRQLDHLSAKRRHV
QERLDQISRNRHQQQSTMAATSHRRTLQHAMTFIRRGLKAEGRGVQLRGS
VSQNLHPTLISTPAEGDSRIEPKTLTAFQSIFAAKRSERVRMGMERLFEM
SGVNATGITAIDGSSGAGTAVRTITTTTAATTSDKYAEFAAKCVINMFKK
VHKSNKVFLGEVHALEAKVLSMRAQLQVQEIKLVNSTLDTTTIPIATATA
SLWSLTPPTVSSSSSLLPTAATIREQESRCTIYRELSAGAHEVLDQLKIG
VNHLARLVAPHCATLPLVTIRSAKGEHRDHYDDRDLPQVFALFDQRITSI
HEIVALDTNEKADGAIKMFANTSTKGNRRGFGEGIHSIDNGGPAGAYQDI
VSSVIDVTACSSADRSRGKTGVGRPSATGSDNDLWSIDMGKVMHMKKQAT
LSRKPTHPQSSSSSTQRPLIVYSPNDSSLRCIPTYKKKIRIQDSASMEDS
YEPEVLESRKRDDNLVVREREKHHIFAADKDETASFFHDALVRDSPSHLR
MRQVMKREWDIKARQYVHVGEMHGLAIDQVLRQAHTSMKKILGWEKDGRV
DPTKATTPKASASRGVRSVSSSRYSKRISI*
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Synonyms
Publications