jgi.p|Nanoce1779_2|597449, gene_6600 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|597449
Unique Namegene_6600
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:236976..238822 +

Link to JBrowse

Properties
Property NameValue
TranscriptId597535
ProteinId597449
Product nameIndoleamine 2,3-dioxygenase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:236976..238822 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0033754indoleamine 2,3-dioxygenase activity
GO:0020037heme binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02730NO06G02730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597449mRNA_6600-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597449mRNA_6600Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|597449

>mRNA_6600-protein ID=mRNA_6600-protein|Name=jgi.p|Nanoce1779_2|597449|organism=Nannochloropsis oceanica|type=polypeptide|length=576bp
MPPHSPPRSPPPPCSTISAFLRSFDIDPVHGFLPSSWPLPRLPYLAFQAH
EDLAAVLPQLLVSSTARAAIEALPLVKSTSTRNLFNNNEPAQRRALLLFG
GLASAYVWGGGTDVTPRDYLPACIAVPLYEVARMLETCPILSHQSNCLYN
WKKGASEKAKEKGGNVNRMHNGDEDACSDSDNPSNPLQAQNLALTFSFTG
DDNERMFYLLSLEIEVVGARALPLLETARRAAHHLLKASFPCSWKGDEGE
ENGMKTEQHQQQQQQQHQQEVYLQQESREVEEKAIIDALIQVRACIRACQ
SILLSMPRHVDPVFFFHRIRPYLSGWRNNPSVPQGIIYRGVVVGEGEGGG
EVGGGRGQGRGRGREDAGQSSNENEHQQEGDNYSEQELDERGPRLSYSGG
SAAQSSLLPSLDLYLGVNHDEAGTRSQSSYQFVKAMRAYMPKGHRRFLEA
LEEDVKIEDEEEGREKRMSIRRYVLWRCEECEGGKEERKEDGLRLVRAYD
GCVEALVAFRMSHLGIVRLYITHQQGGKGGRKTGGGGLEEAAGGKGTGGQ
APKEFLKPLRDQTAAALLEGKVKGV*
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Synonyms
Publications