jgi.p|Nanoce1779_2|648787, gene_5571 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|648787
Unique Namegene_5571
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:795261..800017 +

Link to JBrowse

Properties
Property NameValue
TranscriptId648873
ProteinId648787
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:795261..800017 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016773phosphotransferase activity, alcohol group as acceptor
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|648787mRNA_5571-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|648787mRNA_5571Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|648787

>mRNA_5571-protein ID=mRNA_5571-protein|Name=jgi.p|Nanoce1779_2|648787|organism=Nannochloropsis oceanica|type=polypeptide|length=1198bp
MYGRVLEAQQAFFELIQREAFHGHGVGGRGAQFELELWEERWIECSKQLN
QWPTLGEFAASTVHPELALECAWKSADWETVRSLLQSNQLILQQETGSPA
HRVHEARLAVADNRPPLEVERALGQAFQLALSKWQLLPRVYQGCPSHKPL
LHVMHQLHEIKESMTLMDDAAMGRTPGVIRDGGSGGGGLGGQSSGAASAT
ATHLHNLVRFWRDRLPNAWDPLNEWDDVLYWRLQVFQKIQERRLAAANGV
SPDPSRVAPEFQDTAWTMVRLAKGARKQGLNDVALNVLCRIPMATMAVPD
AFGKLREQVLVCYQALRTAGLNIINHTNLDFFGGEQTAELFRLKGLFLSA
ADSRLDANQAFSHAMQICGKYAKGWLTWGRYSDELFERETTQRLLGLNAM
ACYLEAVAYNAEGARLLLSRVLQMLVIDEENAAKVLDRHGRRLPDWVWIP
WIPTLIAFLTRPGAHVVKGILKQVTNSYPQAVYCTIRAFFIERRDLQGSL
SHPQTPQMAAVAAAASAQAAAAVAAAASSNAQVRAVLEKGALLLNPPPPS
TSSAAPGAAPLQLTQEIGAFQHAEELVNLFRKSHPGLAQDMEIMLEEVIT
RFRVRQEEELLGTLHTLLQRCFQSVFMHLDDPMPLSLRETLLRVSKKFFR
SPPPVHPPPGSFPVPTPGEHAARAKKTAFVSTFKEAFEKDFMLLPPLAPP
PPTEGQPAPVEPMSLHQVILTLRKWKQLLLYRILKDQQTAGGTSLREQPL
ALYQCSPHLATMRYELPPSAGGSALPSTPVEIPGQYATCPGQPHPDMHAK
LLGFDPKVEVFYRHHAFHRRLCLLGNDGRKYYFVAQGATPYTTRSDERMM
QLHWLINRLLEKTHMAERRSIAVGVPVVVPITPRLRMMEDHRLFTSLGEV
YEAERHARGLDPDAPVLLSRVRGSVVITLAKQELAAEEYLRRERLAVFHE
VTRSGLVSKHILTQFVHSTLGGEPEAIWAWQHTFAQQLAISSLLCFALTC
GDRTPGRLVFHKQNAKVQSADLRPGYGMKGYLESNEEVPFRLSPNLMAVF
SPFLVDGVFVPTMAAVAQAMTHKREFIQPFLHLMLKDDILAWNMSKTTVS
REMMLDQKKMEGMLVDRVNRNVLKVLERLTVCAPSLPTDKAPFVSPLQQG
AGGAGMGSATNLAAMGGLVDSRATLLVERAAKHDYVAQMSPTWHPWL*
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Synonyms
Publications