jgi.p|Nanoce1779_2|648762, gene_5564 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|648762
Unique Namegene_5564
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:756853..770615 +

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Properties
Property NameValue
TranscriptId648848
ProteinId648762
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:756853..770615 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0008104protein localization
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03880NO12G03880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|648762mRNA_5564-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|648762mRNA_5564Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|648762

>mRNA_5564-protein ID=mRNA_5564-protein|Name=jgi.p|Nanoce1779_2|648762|organism=Nannochloropsis oceanica|type=polypeptide|length=4454bp
MLEGLLARFLSSRVGRFVDGVDQQNLNVALWKGEILLQDLRVKSSAVDEC
LGLLPLALSWGHVGTFHLSVPWNALGSKPLVITLKDVTLVFRLLTERDME
EEWKEGRAGLEGKRRRRAAKEQAVKERLKFLQAAKAADEGERDLQQQQQR
QQQQVERRGLAERLFASMLENVQVRLSGAHVRIEGWDGREVGEEDEGEGE
EEEEGEFAAVQEHMAEKEEEREGRSDSEGGMEMSTRKRPCVGKRCALGMK
LMEFRIENDMEEMEEDEEEGEREGEGKEGEGEEEDGENGGEGEAVTSSKR
KNRRGHRLLGPALVRKRATAADFGVYCDLHSKPWLPSDLPPSFPSFSASS
PSSSSGFHPLPRVLLTPHAYILHPTSGTLSVATRPIPLSARKPKYDVACH
LSHVHVALTCAQVDCLRTITGGLAGKAELWEEGVQEEGGREVLPPPRPSN
LLSWPRLVFLVQIRHKYINLHKRRASLSPSETEALKEMEDELRVGDIVFF
RVVAEAEQGKEAARAAAAAAVKTTREGETTVMGWVKSWFGGEGEEEAAAA
AAALAPSSPPTPSKTEEGKGEGGGGGGSCETALLSTADQHTLEEETLEYI
TTLAQATIPPHFTLTRLSLSLNEGSFSLLATRSHPLARAMVDAASTLLVR
PHSWSVTMALGALEVLDLDPLTKYRTVVTRKRHHRSSHPSTSSSSLSPLP
PSMMIIGNYRVSKNADLQIDYNQGLKEGGHDIAVLCRVLPFEVLYSRRLL
EGLQEVLTHSSSFSPSLSPTLPSAFANDEEESGTEGGALLQSLRGWRARQ
QARLLTRMAEKRRIFLDVKIEAPVVLVPETTRAEEGQLLVLDLGCVELCN
LEGGGKEGGKEVGEEVWSVKMQRMGLLMCREGAIYLERRETAADLHSIIE
TFDLTLDLGTRVDSATRTLTSVSLQASLPRLAINLRASTVQYFHRVLARR
RVKARARIAALATRHCFNQQEKRRAKKKGGGRRIISTSVNNGAGCGINSR
GGGTGTRDLPLTASSQYSWQGGTGMLPVCAAAPVVDVAVPIEIGRVQPDR
VLSIIFQAPDIAFSLADDCIAPPLSSLSSSPSSFLLPLVDVAVAGVEGQV
HAHDRRAEGKTSTRVSLETTSLEVRDRHPFTDVSFIELLGPLRRNKEGEK
EGGKEGGKDGGKEGEGDNASLLSIKLVREAVTTAAAAAAAAGRGGGDGRG
GQRKETTDVDVSIRPLQVQWNPETVMRLQRFFYFDKKGGSEMGRKGGREE
RDVQRGQQQEFRDRRQSEDEKEDEVGGNEKKEEENREKMDIVAPMTEAGA
PSSYFRALDPVLSFYSSSSSAGGNHASSTTLPPSSTFFRLTTHFQTVSLF
LNKEGELRRLLGLEWQTLDLTLEGGGKTKSLRGALMGLVVTDLASVGTLF
SRVLDGQEEGRLAVRFTYTSLLPATGGYSHVQVGNGGERESGGGVVEADN
HLNIEVGPLHVVYFNQISLEVVDYLNEGVLGALISSTIASADALVRQRAL
AKTGFTITLTHPRVLLPRFLTHPDHALATIDEAVLTTAFEVLKVPLLLGG
GEKGRGRVKDGDGRGKEEEDDLVLRRFDLAFSTVTISLVSSALLAHPPIH
PLPLSFLVCVTRPLDVDYGNTLARRYKEVNSSSSNNINKNSSSSGCSGSS
SSSFDLPSIAVTASLPPLRLRATHQTYSLLRRIIEDNLLTHRHHAADMLK
ALRALDLPPLSTHHHHRRRYSHGGEEGEEEGAGSCPHCARVYKGVEDGAH
TCPQCGDRVCRRCLSVSVFDKASGLVVRVCMACARESFPRLFGGRKRERD
GEEGQQQQAMSQVAYSYGLLDGPLSDIKVDIGLTGLEVDLLEPSSSSCTP
SSFPSSSWEPSARFVIDETKFYFRRPEDDRKILDVSLYRCAVDALSRGGE
GGREGAGAPMMVGRILSPSHEAFGEAAHDDTPATTPENVHSLPPALAPQF
VYRYVSAPREPPMTHFVFNHLNIVILVGPILYISSFFGSMVPDSVLASEE
EEAGLAKALEQLSMSTVRGGEGSTAPLPSSVSVVDGEGGEISASSSSVVS
SPASATRGERGEKREEVEEEPLQEVIARYKFMVHHPRLIFPEAGKDGGRD
DGKAEAKTLKAVVVRGLGVGSFVKELERRMDGALLPRSQWNGQLDGLECY
ITSFSSTPSSAPPFPANDEDVSLINPTSLSLHYNRSYSLLRSPVRHMHLS
LDHVTTYLSYQDFQILARVLESWYRGNLNVHSTSPPSSSTSAHGRKRKEA
AAAVAASPATAAAVVGGYYEVTFPNIKLGLMLRKVDGLTMVDGLATEKEE
KEGKQGREEGGRSDITRSLPRKGDVILSVNDQPAGDHTEILRLMRFLPRP
ITLGFSPRGEPFFLHLCLDDVILHRSVMPDCLLLSDKAALTLLQRTAAGV
GGGGREQERKSVLVGLRQLGQPARMQEMELEVGGVSLLAIDDSEGRDLPL
VKAQAQALQARVMERVCPWRGGREGGREGGVRVLSAAVVGNVQVDYYNGK
IGAWEPLVEPVGLSGSMRREGPVARSRSTSLSPSSSLLTKNSSATINTLN
ILTTEPLCLNVTDAALELLLRTLQAWKKTSARPASLHPSLSSTAIAASNI
RSATMAGTTTTTTTTTSSSSSSSSNNSNISSRGATYLFRNHSGLPATFWA
VRQETGNGGGNRAGREEGRGINLLQKGHSPMFHAPAGAAVPFSIDQHRHS
LIKEAETGREGGEGEEHRREVRRREYDAVHTIFVRLGGSLHWLELSSLPL
TRLGTYAYPFFPPSLPSSLAATSSCSKVVWEVSTEGGRRVLTLRSAVRIE
NSSGLHIQLRCGEGRKEEGEDEYLYVGPWATVSLPLSWAGKPGPVTLRPM
EDEASEAHPSLPTSSSSPSPGTSTTSKTTDVRTMDRFSWSGALWEEPRMA
FGNASTLRSVLVCPPALSPSPYSSSSSSVRPLMLHLATRGGGGEGERGEY
VVEIFAGATLINLLPIAVRYAWRESPMEGGIKGAAAGVTAAAEMGMLGSG
EERGLHCADVVGLGAEICFRLEGGAYEGLGRSKWVRLEAGGGRGGGGRKV
RAEEKRREELEMVDEAGGAFVVLVDVEGRGPHGVRLTLFVDVWVRNATGL
DFVYGEPRTAKAVETLAGPVTADVVLSAVQEGEVVEEVFEIRVEGGRGGR
ETRWGSELGRPLPEKELWRLPSSRAWTWRDEAWRVDRAGAVEREGGWESS
RLDYPDAFKPGRHFRAKDRIFRRRWTRRRGLVKNKTGAWVRGEGGGGGAD
GAEESNQHHRSHVVPFQPRVRGPSIASSSFSSPQQQRQQQQQQQQLVLKV
GDSQWSSPLDVGTEGAGGAFHIIGNRWGPTLSDPRLDRTLYELTYRVITL
PPPWDRTRLVTVRVRYTLRNGGGSRLLVAQVGGGGKGERLPLVVPSTGKV
VQQQQQQQQEEEWMELAPGESRPFHWPDFQREALLVVSFPPSLPPSLSPA
SPPIGGMRYLWSGGIDIGALSDLPIIVRPHHHPSSFPACLSSSRIVRVRV
ELGEEGEEEGAEEEGGGGALTVTLGELSRPRCSLGGKRDKEEDENVEEEQ
EGEKITEGEEEEEEEEEEEEEEEEEEEEEDLPLLLLENRSELTVYYGQEG
REEEDALPPLYAQALGWDHPLLSSYWGEEGIGGGMAAGGVEGEETFRVRL
TLVPPTSPFRRMTDSYLSVSPDAVGSMHVLELPIMRERRGARERGGLTSE
EGRKGVVVEVTADGPSKILRIVNAFLSPLSSSPFPHQRPRISSSSSSSMS
KGSRDGLSRLSPSSAGAVQLPQQQQQQQQARERRRGHRWERKEGSGKAGK
GGRELWRVRLALPAVLVSVVDDTPEEVLVLGLENLVWQVLKEGGGEDGGE
KEVGLHTRLTIGSFQVDNHMVRAHFPVVLRPADDETPQGLSSLPSSTLPP
SIRLDLDLAPPRRSLLAHIRVLRLGVRSLILNLDQSTVLAVQKLGQRLAG
GGREGKRGAGQVVVLPRPATTAGSPAEISRVYVLPVGGGRGEAEGEPVIQ
QRQYQQESLQEGKKKEKQRVKRQSLFIEHLRLDPLTISLSLSRPRESAED
VYVGLKLNKMLSDMLYRLDEARLKLHPLEVSFMLTLPRHLWWLAQAHYSR
EVKRHVFSMLGSLRALGKPVTLIRGIGKGASDFVSQPLQGLVRSVELLDP
EVFFQGVGRGTDSLVKHTVGGVASSASCVMENVGKQLSCLAFDKEYRLAR
ERGREGGERGGEGRGGVVAAPIRGAEQGGVRGMIKGVGKGVLGLVVKPVV
GLADAATDVLQGVQGTAGAATAAEALCQLRPKRAVYGGERRLRVYSAADA
QAQLLLGRARERERGKRSSREGEKMEEDEWYCDFAELGREGGGVVLLSTM
RVLFIDEEGRLRHVLWWREVVLVEVVVPTGSHERTGVILHSQGGREGRPM
RRFLVPCETVGHARIFKYKVEEALLSFRCLGGGGGGGGEGGGGGRGERGG
GRS*
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Synonyms
Publications