jgi.p|Nanoce1779_2|592945, gene_5556 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|592945
Unique Namegene_5556
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:727332..729640 -

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Properties
Property NameValue
TranscriptId593031
ProteinId592945
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:727332..729640 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03780NO12G03780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592945mRNA_5556-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592945mRNA_5556Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|592945

>mRNA_5556-protein ID=mRNA_5556-protein|Name=jgi.p|Nanoce1779_2|592945|organism=Nannochloropsis oceanica|type=polypeptide|length=496bp
MDTLRQLQLQHPHQQQPQQPPQRGNGGEERIGGGNGRAVAAAGAPPAPPL
AAPLPLIIRPEPTEGEGGREERKEEGALTFYPLRVVGLCISMCVCIAVVA
SLVVQVPLRVGREGLRRLGLPTGHDLYNLAVGFLLVVLVGSVLGKGWQVF
VGGEGGGGGEAVRAGAAGGVQGAPAMVVAEGEERAGGGRPQLQQQRQEEG
QEQEDRRDQEEKEQEDGGQQQQQQQQRQRQTQKANPLAFLVARIRTHAHD
RLIHLQRVLPSLGHSFLLLFQSLLLLSLWLLVLPLLVGLLFELVLVIPAR
VPIDETPLIPFYEAWALGLVFLKIQARCLLLGLYGNDHPWKRKFERVRAN
GFRRLEFRWTLTQVVLPLLLLFLSLLLTPYFLSKTVEKLAHLYLRHGLGG
PMPHPALPRFLARFLAPVWYRQQQQRDIHEASILLLVAGIKRYAFLYYAL
YRGSVRVWLWVEKGWKQLHDRLRDDAYLVGMELKNYSQEEGREEG*
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Synonyms
Publications