jgi.p|Nanoce1779_2|543236, gene_5517 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|543236
Unique Namegene_5517
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:614164..617113 -

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Properties
Property NameValue
TranscriptId543322
ProteinId543236
Product nameheat shock protein 40
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:614164..617113 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0031072heat shock protein binding
GO:0003677DNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03440NO12G03440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|543236mRNA_5517-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|543236mRNA_5517Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|543236

>mRNA_5517-protein ID=mRNA_5517-protein|Name=jgi.p|Nanoce1779_2|543236|organism=Nannochloropsis oceanica|type=polypeptide|length=649bp
MAVVLTLPLPAASHGGGGAETSTAAGSASVLVEITSPLAWATTSPQRQIE
TCGLAYFQYQLKRQAIEDGEDGSGGLDHKRPRAGLEGEREEEAGDDDMGD
ETTFRFTKKTLTPKDVKSMDYYEMLGLGHLSAAQVGPELLKKAYRKALLL
YHPDKTGRGDRDEVFIEVQKAYETLSDERKKRAYDSEMNFDDSIPTGREK
GDFYKVFGPVFDRNARFAVKRPVPGLGDKDTSFDDVYRFYDYWGRFESWR
DFSLKAAEENDFHSEEAGSREEKRWMQKENDKLARSMKKEEYKRLATLVD
RAKAADPRLKAAKEMEKQKKEQAKLNRAAMQRQKEEARRKEDEEEAKKKE
VEEAKMKVVRAQAKALRDKDKRRMRFARSRFRALCEILRIRAGLAGGKEG
GKEGVVSSEEEAFMFECVDVAGMEEAVEALEGAPTEALVEGVKQVKLIVA
RKRKAQQGGDDAGTKGSEAQAQAAAATATAAAAAAAAKKEVPWTEDELGV
LAKAVVRFPAGTQKRWQCIAEYINHMLKLDHLRSKEECIKQYQVVQSTVG
KAKVMNAVAGGGTGGGGTKAAGTTPSAEGGAGEGWSQEQQKQLEAGLVRF
PASMEKNERWKCIAEGVEGKSKKECAERFKALKALMAKKKEVAGAAKA*
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Synonyms
Publications