jgi.p|Nanoce1779_2|591513, gene_5137 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|591513
Unique Namegene_5137
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:551733..555220 -

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Properties
Property NameValue
TranscriptId591599
ProteinId591513
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:551733..555220 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02420NO11G02420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591513mRNA_5137-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591513mRNA_5137Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|591513

>mRNA_5137-protein ID=mRNA_5137-protein|Name=jgi.p|Nanoce1779_2|591513|organism=Nannochloropsis oceanica|type=polypeptide|length=1068bp
MDNFNSFFQTLSRGASTVTGPASGTTSAPAPAPGILGTAVTTTTTQRNST
SSTAAASPSSSSVSSLSSSISSIPGNGDGERASGTVAGMEVTTPAFTFST
PQGGLPHPQCTPIAFYNSDALYGSGRLIAVSDAFICYAIKDGHIRGINRQ
SVQRTLLKGHKKPVIDMAFARRSTCTLASLGGDGSFFLWTIGENPADKSL
TTVPLLSVTNVHLQRIVWHPTKPHTVAVVAPNGEVALINTQTLIQKLGGK
PGGVAPTLAATKGLDDLQPEWKLSVASNRCLDLSFSQDGKYIVTAGADGW
ARVWEVESKQAMGRWQPYGGEPVSRALFLHRTKGSSSGEKVFVVTGGKQA
SEVKLFRAWTTLSPINTQSLTFVPPPPDRDVGKGGRAFHLEADESGEFLL
LADAVRPLLYAAHVVLGPSSAKVDRLTPFQLKHPVLSLLSLPGVAIDAHE
GQADKTGASEVQLFCVQTQAIQIYHLKPEDCLAGSGSTITAPASLPSTTA
AAAAPAPAPTTSARFSHQTTAAPPSGQSPAILQMLLQASQAAGSSGNNTT
TGSSSAPGLLASKSLTASAASNGRRAAAGGDGEEEKGGRGEGAGITQAVA
ASLTEAKQTGGAQTTEEKGQVRSSREGRGLGSRNISAQRFATGGAGEESS
GVGGGVASGQASRDATSGMGPVATVSPSEPASPSVPSPPPPPSSGMPHRA
AVASGETSGGISLAAASAATSATVNTEVVLAGLRDMEHRLGQLLTQNTKK
AVADAIAGMDKKIEKSIKAALALQLGDVSGQVKEAALAGLGDAVKEPMGA
SFKQCFLETLLPAMQNTTQRMFAQINDSINKNLPGAVTAAVAASGGGGTA
GLTGLTEVKGEFRQVRSELASVANAVTVLSAQLAAWGSRLENGDDVMDLG
GGLGGGAWRGKAAPAAAPAPAAPVISATQKEKMLRDLKAGKIDEVFVNVL
SSQDLDLSLWLCSESPKDDIFDSEPPLLSQPTMFCLLQQLSFHLGQHTEK
KLEWMQELVLAIDPSNSVVKSYIGEVCPELIQNFNEAAPEVVAVGHPRLV
KDFKRVQKAIQNLARGT*
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Synonyms
Publications