jgi.p|Nanoce1779_2|670793, gene_4431 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|670793
Unique Namegene_4431
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:574628..579958 +

Link to JBrowse

Properties
Property NameValue
TranscriptId670879
ProteinId670793
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:574628..579958 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01230NO09G01230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670793mRNA_4431-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670793mRNA_4431Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|670793

>mRNA_4431-protein ID=mRNA_4431-protein|Name=jgi.p|Nanoce1779_2|670793|organism=Nannochloropsis oceanica|type=polypeptide|length=1204bp
MLGRTSAAASILFALVNPFLNHAQQACNTTLLLDEAQALLRANVDPTQGW
TVPSKATAPFLDSTSSLFTAYAYAKFDPDAGMKELLASLAGQWPINGLVP
RIRFPAASDGDAWLQGTFFPGPSQWQAPQGESNLTSAGLAAPPYHAIIAM
QLFNARRDDAGLAFLAEVFPAIYKYHGYLHLSRDAHNHLVYSYHPWESEL
PADSPIWAEVLNATQARLTAEEWVPRVPLEEPASIAGYPGEEIFTAEMYL
VDLMGRGSGYDDTRIQQETPFLVIDVEFNSVLAAADVSLAAMAKILQLHS
SDVVDDGMRNAVTGWADTASTRLEYLWAGDRYSSYLLEANAAPKMASTKI
EAATASRVSFVAASTASTAVSQKGVVAGLGVGGLTAQAKGAGSSGRAAGT
AATATTTGSGSKRPKVTTPVHHHQGGTLRSLAMPKKPPAVSAPPPSPPSV
PLPPGSFYPFSVVSNFWPLYVGGSGLPPSRVEGLFFQIITPGLNSSFDCQ
GDVYRLPTSACAVNDPKPKVSLLHNLIVQRGLAMNGDFGLNQWLLNETVS
LVCAASMDPFAKPPATSPTFRFCRYFDPVSGLPQGKKEDMYGEESTLAAA
LVWTLLHADAPGGAETPPISHDLTFALVVVELVIAFATGMGCFVLSLSLF
RKLSRADVENVGPVSSMLLVREEEEEGHYEGEEGDDDGERSYQGGETEEE
EKRSSKALRLGAGSADAAKTRLRSRGLVLSGGQPFKAEEGLVPDFCLAIL
GDLHLDRYDMALHNEGRQHIIDNMAVLKNKLSSPKSQARLVSLGDLGAYG
DAGTTTCFEHAKAYLEGYHLPYNLVTGNHDLEGMDEFSTDVENLQAWQDA
FGLKFPTFCHQIGEKTLCIGLSTTRFRSSPFSSHEVYIPKAQTIWLENLL
KHHPEEEGWRVLVFSHAPPMGAGIRVVQNVHIKNGCAFLNHSSGDEERRV
FIRLCKENHCIKAWFSGHFHLSADYEDSITSREGTVFVQTGVMGEKSSRD
GRRQSRMVQGDGEGLQVYTVNHHKGGELRLDVTIKYKPGGEDIVEAHGHE
DYAHDKWFRAYSPAEEDGCYLQSPEGVILDAMDEEGEGREKVCWWHMADG
RVLGVHEGQVIEYDAETLSPLGIVVDKEQLRGREMVVVGEGQALILVSSL
EALSKETTEGDYEIIHPNEDGSYWRRRQRNKLVRQREKEREKIAADWLKQ
NFK*
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Synonyms
Publications