jgi.p|Nanoce1779_2|630262, gene_4391 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|630262
Unique Namegene_4391
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:471332..475037 +

Link to JBrowse

Properties
Property NameValue
TranscriptId630348
ProteinId630262
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:471332..475037 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003720telomerase activity
GO:0003724RNA helicase activity
GO:0003887DNA-directed DNA polymerase activity
GO:0003896DNA primase activity
GO:0004779sulfate adenylyltransferase activity
GO:0008192RNA guanylyltransferase activity
GO:0008193tRNA guanylyltransferase activity
GO:0008905mannose-phosphate guanylyltransferase activity
GO:0033677DNA/RNA helicase activity
GO:0043338CTP:2,3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase activity
GO:0043814phospholactate guanylyltransferase activity
GO:0000287magnesium ion binding
GO:0003684damaged DNA binding
GO:0016779nucleotidyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01610NO09G01610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630262mRNA_4391-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630262mRNA_4391Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|630262

>mRNA_4391-protein ID=mRNA_4391-protein|Name=jgi.p|Nanoce1779_2|630262|organism=Nannochloropsis oceanica|type=polypeptide|length=959bp
MRFFVNGWTPLPVEELRALVHDHGGHIAAYETSDVTHMLCTNLPHAKLKQ
RRAQKLARGAHQQLPVIHPDYVQACVDKGRRLPPGDFLVDGVKHHHGQGI
QSFMNQGKARDSDVGSGGGGSSDTKICAVAGGSGGKANNTARATSSTTRI
VDINLLDIPAAVQETNETPPRLGTTQLTSSHHLQTATAAAAAASPYRPHL
LHDVNNKCLKDKPLSSLAPLLPDGGKTTPTASPLPPQSSSPLKGLLDNKN
DTITNAGGGGPLSTKDDPNFLQKYFKSSRLHFIGSFRARMQDLAADHARK
CRAARATANTMSSSSSNNNNPCRLIMHVDMDCYFVSALIRDLPHLTHQPV
AVAHGEGLDRNNCSSSEISSCNYPARAKGVRAGMFIGEARKLCPGLKMLH
YDFGVYEKVSHAMYQVFFEEEAAMVVQPVSCDEAYIELVPGTDPEEAARR
VRRRLMEKTRCPASAGVGGNMLLARLATKQAKPSGHKVMLRLEEAMTYLQ
ELPLREIPGVGLELGMKLDQKGLGTCGEMWRVSMPALQSWFGEKTGSMLY
RASRGQDDREVIPKVARKSVGAEVNWGVRFEERGEVEVFVGKLAEEVAVR
MREARVRGRHLTFKIKRSQYGPKEPEKLLGCGRCDNLSRSVGLARATDAG
KEIGMVSLRLLRQLNVPPDLVRGVGIQLTKLVVEGGEEGGEEGGGGRIQT
WLMKSGVGCGGRGGDESEKEEKKEKGAVELVVVEENEEEGWEDEDEIGDK
EWQGWKKQSAKLPSTGQKAEGGKEGREEVHLSLENYALPPPSQIDVSVLT
ALPPSMRTALELHLQQREQRQSLHEQHQAEEEGAAWSSLQHWDVTMSQID
DSTLRALPLDMQNEVRAVTAHLQLLAVYLLERVDEGSEDDVWTLMRSFRR
WVTNEGHEAWRLAYRAVLGVLETRVAERERPQEERLQGWSVEGSAVVTGA
IKWAGLQL*
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Synonyms
Publications