jgi.p|Nanoce1779_2|541607, gene_4340 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|541607
Unique Namegene_4340
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:333880..335653 -

Link to JBrowse

Properties
Property NameValue
TranscriptId541693
ProteinId541607
Product namePyridoxal phosphate-dependent transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:333880..335653 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000105histidine biosynthetic process
GO:0009058biosynthetic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004400histidinol-phosphate transaminase activity
GO:0016769transferase activity, transferring nitrogenous groups
GO:0030170pyridoxal phosphate binding
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02100NO09G02100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|541607mRNA_4340-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|541607mRNA_4340Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|541607

>mRNA_4340-protein ID=mRNA_4340-protein|Name=jgi.p|Nanoce1779_2|541607|organism=Nannochloropsis oceanica|type=polypeptide|length=460bp
MITLTESELALLAGVSGLAVYAAKQTPKCPFHRLVFAVSNVAVLGGGLYI
LWRSWSEAPPRFVRFLTAAKKSKQQPRGCVKGEEAKERDQDPRVAAVLGL
VRQNILELEPYRCARDDYSEGILLDANENSFGSALPPAERTQQLERYPDP
YQQELKEKIGAYRGVRPEQIFVGVGSDEAIDLIMRIFCEPGKDRILVTPP
TYGMYKVSAKTNDVGIVAVPLTPDFSVRVSEILQAVASTPRIKVIFLCSP
GNPTAKLVPLEVVEQVLKGVEGCMVVVDEAYVDFADANAVSACRLVDRYP
NCLVLQTLSKAFGLAGIRCGMAIGHPAVIQVLNNVKAPYNVSKLTSSMAH
KAFESGNLAVLKQNVKDILKEKERVVEALGGLSVVKKIHPSDTNFILFEV
PQAKDIYQDMAEGGVVARFRGHELHCKDCIRLTIGQPHENDSFLELFKKT
TEKYLGKYT*
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Synonyms
Publications