jgi.p|Nanoce1779_2|629820, gene_4179 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|629820
Unique Namegene_4179
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:1043008..1046341 -

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Properties
Property NameValue
TranscriptId629906
ProteinId629820
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:1043008..1046341 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004651polynucleotide 5'-phosphatase activity
GO:0004484mRNA guanylyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:00063707-methylguanosine mRNA capping
GO:0006397mRNA processing
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00410NO10G00410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629820mRNA_4179-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629820mRNA_4179Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|629820

>mRNA_4179-protein ID=mRNA_4179-protein|Name=jgi.p|Nanoce1779_2|629820|organism=Nannochloropsis oceanica|type=polypeptide|length=759bp
MSGFSLAQTMASMQSHTAALEKESTPLPQQQQQQQHMQASAARGATGEEP
FTFLARTLDKVRTMILAELPATVWPKVEIEARLGIFCHQGAAEDERVFPA
FPGVGVIELGPEGQGGPPTRFFSGVTRGAFEQMKACVAGLGGGEGKTVEA
SHLHEIVYTYADKRRLRCPAQNPGSGMLESKRKILEINVALPAASYDLRL
TVAVENEEEGVQGIMKGWESRRAKIRTSFKDLLGNSTLGPWSLDFTCVTT
LEGDGGGGGGGGGGGGGRGRGLDEESTEVEMELEAEVLAGWLEKGGEEAD
KETSRLASRLLDTLKRLNPLEKASPGNVLVPLMMDRSVGGAAGGAPVQEA
LRQRCVAVLQAAGGGGGGGRHMKFPGTMPVNLCRKDVATVQSGGYWLAEK
TDGVRYLLFVLGGINNNQASSYLMDRSMAIFTFPGADGLGQAVPAGTVLD
GELVYNCLTSSYVFLVFDCLFWGAEPMVGLPFSQRLKAIHAKVLPVYEQG
KAGGRLVPGKHLPVVGKKFYRRMDIGKLFERVKEEEGHRVYRDEGCITSY
LAYLGLGPKKEAAGKEEVEEEDGEAERVWPVRDCLSRYYHKTDGIVFQPD
KPYQCSTDTSFFKWKWMDTVTIDFAITPTPYRVVCGAGAAGSLDLTRQIR
LEPLDLMRLRADMSAAHCRIAELGFSVETGFWTYKMLRPDKTDPNYFTTV
CTTMLELAEGMEEEEIQYRMMVGEAADDDWGGQVGRMRRAAVHKQAFEDD
GKGTGGGG*
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Synonyms
Publications