jgi.p|Nanoce1779_2|668435, gene_401 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|668435
Unique Namegene_401
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:992101..995012 +

Link to JBrowse

Properties
Property NameValue
TranscriptId668521
ProteinId668435
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:992101..995012 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03900NO01G03900Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668435mRNA_401-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668435mRNA_401Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|668435

>mRNA_401-protein ID=mRNA_401-protein|Name=jgi.p|Nanoce1779_2|668435|organism=Nannochloropsis oceanica|type=polypeptide|length=801bp
MAKKPPRRETGRLLYRVRLGLGLGLGLGRKRGSLVRGFGSRFLSPTEASV
ALLSFKAPHLFLDGKTTQMQAWRCQIFKLMQKQRRDGNKKCAKRTNRNSF
ALFDSSRAMHGGTLTFTLPLPTHIYQRPQQTMLKTLASASSVPFASTLGS
ASQQLWQQGLFRSNTLRMRLRPLRAIVTFVLIVMALESRRQQRRLSGILI
TLLASLQRSLESWQERLARLKRRSGGGYGALWAGRGGGKPFSGVFFWGGT
GDEDGAGNTTLTAGDGEGKPFRRKVMLGDRGRARCSWMVRQQFLRHAYCD
VTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAF
QLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDT
ACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLEL
LSHDGLTHGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQ
VRFPHMPARLLVEEVEGHPIMQAEACQRFVLEAYRYQAVVPFPQQHCQLY
QQQQQAQEEGESKWRPLQLQLPQQELLQKYALEMGVRARPRRKLASGGGG
KKCLLLAAENNRSSSSISKSNTYQCPELEEEKWGEELLLPGEGGGMVGGR
KERGRRSGSSSSCSNSSTSIPSMTTITNHQLVGRVEEIEPQVVVCGGRGG
IEGGSTTTSYSLISTTITAKYDRRIENEEEDSSCISNKDSGGCSNSNNNS
NSNNSSSSNNSSSRNNSSSSSSSSSSSSSSSCSSSNNNTIVDWEGNMPRK
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Synonyms
Publications